Clone Name | bart51c01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK061862.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G12, full insert sequence Length = 1371 Score = 165 bits (83), Expect = 2e-37 Identities = 193/230 (83%) Strand = Plus / Plus Query: 214 ccggtgacggcgccggccttcctctgggcgcccaagaactacggactcagtcccaatgag 273 ||||||| || ||| |||||||||||||||||||| ||||||||| || | | ||||| Sbjct: 181 ccggtgatggggcctgccttcctctgggcgcccaataactacggattctcttctgatgag 240 Query: 274 gctaaagaagtagtccactatcagacaatctccccaaagagcttagctgattctgttctc 333 |||||||| | ||| ||||||||||| | |||||||||||||||| | |||||||| Sbjct: 241 actaaagaaatggtctactatcagacagtatccccaaagagcttagtgaaatctgttctt 300 Query: 334 gaggaaggtggttggtcaaatttggtgtgttcaaaggatggtcctcaaaagaatgttgat 393 |||||||||||||||||||| ||||||||||||| ||| | || | ||||| ||||||| Sbjct: 301 gaggaaggtggttggtcaaacttggtgtgttcaagggaggatcatgcaaagagtgttgat 360 Query: 394 gttgcagttatttttctcgggatcaagctacnatcatcagacatctctaa 443 ||||||||| ||||||| || ||||||| |||||||||||| ||||| Sbjct: 361 gttgcagttctttttcttggctcgaagctacaatcatcagacatttctaa 410
>dbj|AK103742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138L11, full insert sequence Length = 1354 Score = 165 bits (83), Expect = 2e-37 Identities = 193/230 (83%) Strand = Plus / Plus Query: 214 ccggtgacggcgccggccttcctctgggcgcccaagaactacggactcagtcccaatgag 273 ||||||| || ||| |||||||||||||||||||||||||||||| || | | ||||| Sbjct: 166 ccggtgatggggcctgccttcctctgggcgcccaagaactacggattctcttctgatgag 225 Query: 274 gctaaagaagtagtccactatcagacaatctccccaaagagcttagctgattctgttctc 333 ||||||||| ||||||| ||||||||| | ||||| |||||||||| | |||||||| Sbjct: 226 gctaaagaaatagtccattatcagacagtatccccgaagagcttagtgaaatctgttctt 285 Query: 334 gaggaaggtggttggtcaaatttggtgtgttcaaaggatggtcctcaaaagaatgttgat 393 || ||||||||||||||||| ||||||||||||| ||| | || | ||||| ||||||| Sbjct: 286 gaagaaggtggttggtcaaacttggtgtgttcaagggaggatcatgcaaagagtgttgat 345 Query: 394 gttgcagttatttttctcgggatcaagctacnatcatcagacatctctaa 443 ||||||||| ||||||| || ||||||| ||| |||||||| ||||| Sbjct: 346 gttgcagttctttttcttggctcgaagctacaatcgtcagacatttctaa 395
>gb|AY104784.1| Zea mays PCO129009 mRNA sequence Length = 1520 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 220 acggcgccggccttcctctgggcgcccaagaactacggactcagtcccaatgaggctaaa 279 |||||||| || ||||| ||||||||||| ||||||||| |||| | |||| ||||| Sbjct: 203 acggcgccagcgttcctgtgggcgcccaaaaactacggattcagctctgatgatgctaag 262 Query: 280 gaagtagtccactatcagacaatctccccaaagagcttagctgattctgttctcgaggaa 339 || |||||||| || || |||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 263 gaggtagtccattaccaaacaatctcaccaaagagcttagctaaatctgttctcgaggaa 322 Query: 340 ggtggttggtcaaatttggtgtgttcaaaggatggtcctcaaaagaatgttgatgttgc 398 ||||| |||||||| || |||| |||| ||| | | |||| || |||||||||||||| Sbjct: 323 ggtggctggtcaaacttcatgtgctcaagggaggatactcagaataatgttgatgttgc 381
>gb|AY109148.1| Zea mays PCO129008 mRNA sequence Length = 1389 Score = 113 bits (57), Expect = 5e-22 Identities = 153/185 (82%) Strand = Plus / Plus Query: 214 ccggtgacggcgccggccttcctctgggcgcccaagaactacggactcagtcccaatgag 273 ||||| |||||||| || |||||||||||||| |||||||||||| || | | |||| Sbjct: 207 ccggtcacggcgccagcgttcctctgggcgcctaagaactacggattccgctctgatgat 266 Query: 274 gctaaagaagtagtccactatcagacaatctccccaaagagcttagctgattctgttctc 333 ||||| || |||||||| ||||| |||||||| ||||||| ||||||| | |||||||| Sbjct: 267 gctaaggaggtagtccattatcaaacaatctcaccaaagaacttagctaaatctgttctt 326 Query: 334 gaggaaggtggttggtcaaatttggtgtgttcaaaggatggtcctcaaaagaatgttgat 393 ||||||||||| ||||||| || ||||||||| ||| | | || | ||| |||||||| Sbjct: 327 gaggaaggtggctggtcaacctttatgtgttcaagggaggatactgagaagcatgttgat 386 Query: 394 gttgc 398 ||||| Sbjct: 387 gttgc 391
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence Length = 147941 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 269 atgaggctaaagaagtagtccactatcagacaatctccccaaagagcttagctgattctg 328 |||||||||||||| ||||||| ||||||||| | ||||| |||||||||| | |||| Sbjct: 112698 atgaggctaaagaaatagtccattatcagacagtatccccgaagagcttagtgaaatctg 112757 Query: 329 ttctcgaggaaggtggttggtcaaatttggtg 360 |||| || ||||||||||||||||| |||||| Sbjct: 112758 ttcttgaagaaggtggttggtcaaacttggtg 112789 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 214 ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 257 ||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 110527 ccggtgatggggcctgccttcctctgggcgcccaagaactacgg 110570 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 aaagaatgttgatgttgcagttatttttct 410 ||||| |||||||||||||||| ||||||| Sbjct: 112948 aaagagtgttgatgttgcagttctttttct 112977
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 269 atgaggctaaagaagtagtccactatcagacaatctccccaaagagcttagctgattctg 328 ||||| |||||||| | ||| ||||||||||| | |||||||||||||||| | |||| Sbjct: 1152649 atgagactaaagaaatggtctactatcagacagtatccccaaagagcttagtgaaatctg 1152590 Query: 329 ttctcgaggaaggtggttggtcaaatttggtg 360 |||| |||||||||||||||||||| |||||| Sbjct: 1152589 ttcttgaggaaggtggttggtcaaacttggtg 1152558 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 214 ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 257 ||||||| || ||| |||||||||||||||||||| |||||||| Sbjct: 1154441 ccggtgatggggcctgccttcctctgggcgcccaataactacgg 1154398 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 aaagaatgttgatgttgcagttatttttct 410 ||||| |||||||||||||||| ||||||| Sbjct: 1152423 aaagagtgttgatgttgcagttctttttct 1152394
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 269 atgaggctaaagaagtagtccactatcagacaatctccccaaagagcttagctgattctg 328 |||||||||||||| ||||||| ||||||||| | ||||| |||||||||| | |||| Sbjct: 1277917 atgaggctaaagaaatagtccattatcagacagtatccccgaagagcttagtgaaatctg 1277858 Query: 329 ttctcgaggaaggtggttggtcaaatttggtg 360 |||| || ||||||||||||||||| |||||| Sbjct: 1277857 ttcttgaagaaggtggttggtcaaacttggtg 1277826 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 214 ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 257 ||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 1280088 ccggtgatggggcctgccttcctctgggcgcccaagaactacgg 1280045 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 aaagaatgttgatgttgcagttatttttct 410 ||||| |||||||||||||||| ||||||| Sbjct: 1277667 aaagagtgttgatgttgcagttctttttct 1277638
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 269 atgaggctaaagaagtagtccactatcagacaatctccccaaagagcttagctgattctg 328 |||||||||||||| ||||||| ||||||||| | ||||| |||||||||| | |||| Sbjct: 1275638 atgaggctaaagaaatagtccattatcagacagtatccccgaagagcttagtgaaatctg 1275579 Query: 329 ttctcgaggaaggtggttggtcaaatttggtg 360 |||| || ||||||||||||||||| |||||| Sbjct: 1275578 ttcttgaagaaggtggttggtcaaacttggtg 1275547 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 214 ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 257 ||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 1277809 ccggtgatggggcctgccttcctctgggcgcccaagaactacgg 1277766 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 aaagaatgttgatgttgcagttatttttct 410 ||||| |||||||||||||||| ||||||| Sbjct: 1275388 aaagagtgttgatgttgcagttctttttct 1275359
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 269 atgaggctaaagaagtagtccactatcagacaatctccccaaagagcttagctgattctg 328 ||||| |||||||| | ||| ||||||||||| | |||||||||||||||| | |||| Sbjct: 1152649 atgagactaaagaaatggtctactatcagacagtatccccaaagagcttagtgaaatctg 1152590 Query: 329 ttctcgaggaaggtggttggtcaaatttggtg 360 |||| |||||||||||||||||||| |||||| Sbjct: 1152589 ttcttgaggaaggtggttggtcaaacttggtg 1152558 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 214 ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 257 ||||||| || ||| |||||||||||||||||||| |||||||| Sbjct: 1154441 ccggtgatggggcctgccttcctctgggcgcccaataactacgg 1154398 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 aaagaatgttgatgttgcagttatttttct 410 ||||| |||||||||||||||| ||||||| Sbjct: 1152423 aaagagtgttgatgttgcagttctttttct 1152394
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126974 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 269 atgaggctaaagaagtagtccactatcagacaatctccccaaagagcttagctgattctg 328 ||||| |||||||| | ||| ||||||||||| | |||||||||||||||| | |||| Sbjct: 91632 atgagactaaagaaatggtctactatcagacagtatccccaaagagcttagtgaaatctg 91573 Query: 329 ttctcgaggaaggtggttggtcaaatttggtg 360 |||| |||||||||||||||||||| |||||| Sbjct: 91572 ttcttgaggaaggtggttggtcaaacttggtg 91541 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 214 ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 257 ||||||| || ||| |||||||||||||||||||| |||||||| Sbjct: 93424 ccggtgatggggcctgccttcctctgggcgcccaataactacgg 93381 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 381 aaagaatgttgatgttgcagttatttttct 410 ||||| |||||||||||||||| ||||||| Sbjct: 91406 aaagagtgttgatgttgcagttctttttct 91377
>ref|XM_367614.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07525.4) partial mRNA Length = 1953 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 ggtgacggcgccggccttcctc 237 |||||||||||||||||||||| Sbjct: 108 ggtgacggcgccggccttcctc 87
>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence Length = 126187 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 tcctcaaaagaatgttgatgt 395 ||||||||||||||||||||| Sbjct: 45679 tcctcaaaagaatgttgatgt 45659
>emb|AJ579650.1|STE579650 Streptomyces tenebrarius tobramycin biosynthetic gene cluster, strain ATCC 17920 Length = 13802 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 gcggcggtctggatggcgttggcgg 175 ||||||| ||||||||||||||||| Sbjct: 7706 gcggcggactggatggcgttggcgg 7730
>emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthesis gene cluster region Length = 43220 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gcggcggtctggatggcgttggcgg 175 ||||||| ||||||||||||||||| Sbjct: 23865 gcggcggactggatggcgttggcgg 23841
>ref|NM_000118.1| Homo sapiens endoglin (Osler-Rendu-Weber syndrome 1) (ENG), mRNA Length = 3142 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 2363 ggtggcggtggctgccccgg 2382
>ref|XM_867764.1| PREDICTED: Bos taurus similar to Endoglin precursor (CD105 antigen) (LOC615844), mRNA Length = 2779 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 2034 ggtggcggtggctgccccgg 2053
>ref|XM_960078.1| Neurospora crassa OR74A hypothetical protein (NCU00978.1) partial mRNA Length = 2757 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cggtctggatggcgttggcg 174 |||||||||||||||||||| Sbjct: 2065 cggtctggatggcgttggcg 2046
>ref|XM_325157.1| Neurospora crassa OR74A hypothetical protein (NCU00978.1) partial mRNA Length = 2757 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cggtctggatggcgttggcg 174 |||||||||||||||||||| Sbjct: 2065 cggtctggatggcgttggcg 2046
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cggcggtctggatggcgttg 171 |||||||||||||||||||| Sbjct: 711713 cggcggtctggatggcgttg 711694
>ref|XM_453515.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D10197g predicted mRNA Length = 2571 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 aaatttggtgtgttcaaagg 370 |||||||||||||||||||| Sbjct: 364 aaatttggtgtgttcaaagg 383
>gb|AC110249.10| Mus musculus chromosome 14, clone RP23-257O8, complete sequence Length = 204244 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tccccaaagagcttagctga 323 |||||||||||||||||||| Sbjct: 111564 tccccaaagagcttagctga 111583
>gb|AC135638.5| Mus musculus BAC clone RP23-330K10 from chromosome 18, complete sequence Length = 184588 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 ccaaaccaacgcaaaccccaaatc 118 |||||||||| ||||||||||||| Sbjct: 71918 ccaaaccaacccaaaccccaaatc 71941
>ref|XM_846376.1| PREDICTED: Canis familiaris similar to Endoglin precursor (CD105 antigen) (LOC609166), mRNA Length = 2166 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 2067 ggtggcggtggctgccccgg 2086
>gb|BC014271.2| Homo sapiens endoglin (Osler-Rendu-Weber syndrome 1), mRNA (cDNA clone MGC:10516 IMAGE:3843174), complete cds Length = 2830 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 2030 ggtggcggtggctgccccgg 2049
>ref|XM_668121.1| Plasmodium berghei strain ANKA hypothetical protein (PB102820.00.0) partial mRNA Length = 803 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ttgatgttgcagttattttt 408 |||||||||||||||||||| Sbjct: 536 ttgatgttgcagttattttt 517
>gb|BC031967.1| Homo sapiens cDNA clone IMAGE:4827521, with apparent retained intron Length = 1911 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 1141 ggtggcggtggctgccccgg 1160
>gb|BC114687.1| Bos taurus cDNA clone MGC:137842 IMAGE:8088499, complete cds Length = 2802 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 2003 ggtggcggtggctgccccgg 2022
>gb|CP000322.1| Nitrobacter hamburgensis X14 plasmid 3, complete sequence Length = 121408 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggatggcgttggcggtgatg 180 |||||||||||||||||||| Sbjct: 102963 ggatggcgttggcggtgatg 102944
>emb|AL162586.26| Human DNA sequence from clone RP11-228B15 on chromosome 9 Contains the 5' end of the SH2D3C gene for SH2 domain containing 3C (CHAT,NSP3), the CDK9 gene for cyclin-dependent kinase 9 (CDC2-related kinase) (TAK, C-2k, CDC2L4, PITALRE), the FPGS gene for folylpolyglutamate synthase (folylpolyglutamate synthetase), the 3' end fo the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1)(END, ORW, HHT1, ORW1, CD105), a novel gene and five CpG islands, complete sequence Length = 80642 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 67756 ggtggcggtggctgccccgg 67737
>emb|CR860247.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0419 (from clone DKFZp469D0419) Length = 3003 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 2226 ggtggcggtggctgccccgg 2245
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 aaatttggtgtgttcaaagg 370 |||||||||||||||||||| Sbjct: 863933 aaatttggtgtgttcaaagg 863914
>emb|BX842629.1| Neurospora crassa DNA linkage group I BAC contig B20J13 Length = 126048 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cggtctggatggcgttggcg 174 |||||||||||||||||||| Sbjct: 95107 cggtctggatggcgttggcg 95126
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gatggcgttggcggtgatgc 181 |||||||||||||||||||| Sbjct: 301961 gatggcgttggcggtgatgc 301980
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gatggcgttggcggtgatgc 181 |||||||||||||||||||| Sbjct: 239707 gatggcgttggcggtgatgc 239726
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gatggcgttggcggtgatgc 181 |||||||||||||||||||| Sbjct: 163372 gatggcgttggcggtgatgc 163391
>gb|BT007558.1| Synthetic construct Homo sapiens endoglin (Osler-Rendu-Weber syndrome 1) mRNA, partial cds Length = 1977 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 1878 ggtggcggtggctgccccgg 1897
>gb|BT006872.1| Homo sapiens endoglin (Osler-Rendu-Weber syndrome 1) mRNA, complete cds Length = 1977 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 1878 ggtggcggtggctgccccgg 1897
>dbj|AK123738.1| Homo sapiens cDNA FLJ41744 fis, clone HSYRA2005496, highly similar to ENDOGLIN PRECURSOR Length = 1872 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 1112 ggtggcggtggctgccccgg 1131
>dbj|AB183516.1| Pseudomonas fragi gene for D(-)-3-hydroxybutyrate dehydrogenase, complete cds Length = 1265 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gatggcgttggcggtgatgc 181 |||||||||||||||||||| Sbjct: 838 gatggcgttggcggtgatgc 819
>gb|U37439.1|HENDOGLN9 Homo sapiens endoglin (ENG) gene, exons 13 and 14, and complete cds Length = 1249 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 480 ggtggcggtggctgccccgg 499
>dbj|AK171923.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830019M01 product:hypothetical protein, full insert sequence Length = 4988 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 ccaaaccaacgcaaaccccaaatc 118 |||||||||| ||||||||||||| Sbjct: 4491 ccaaaccaacccaaaccccaaatc 4514
>gb|AC154180.2| Mus musculus BAC clone RP24-469E6 from chromosome 14, complete sequence Length = 187810 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tccccaaagagcttagctga 323 |||||||||||||||||||| Sbjct: 131073 tccccaaagagcttagctga 131054
>gb|AF289203.1|AF289203S1 Homo sapiens odorant receptor HOR3'beta1, odorant receptor HOR3'beta2, and odorant receptor HOR3'beta3 genes, complete cds Length = 36446 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tggtgtgttcaaaggatggt 375 |||||||||||||||||||| Sbjct: 10416 tggtgtgttcaaaggatggt 10397
>ref|NM_214031.1| Sus scrofa endoglin (ENG), mRNA Length = 2908 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 2121 ggtggcggtggctgccccgg 2140
>gb|AC129505.8| Homo sapiens chromosome 11, clone RP11-1205H24, complete sequence Length = 117817 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggtgtgttcaaaggatggt 375 |||||||||||||||||||| Sbjct: 67321 tggtgtgttcaaaggatggt 67340
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gatggcgttggcggtgatgc 181 |||||||||||||||||||| Sbjct: 3614000 gatggcgttggcggtgatgc 3614019
>gb|AY892828.1| Synthetic construct Homo sapiens clone FLH013258.01L endoglin (ENG) mRNA, partial cds Length = 1977 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 1878 ggtggcggtggctgccccgg 1897
>gb|AY890361.1| Synthetic construct Homo sapiens clone FLH013262.01X endoglin (ENG) mRNA, complete cds Length = 1977 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 1878 ggtggcggtggctgccccgg 1897
>gb|AY890360.1| Synthetic construct Homo sapiens clone FLH013261.01X endoglin (ENG) mRNA, complete cds Length = 1977 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 1878 ggtggcggtggctgccccgg 1897
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 147 gatggcggcggtctggatggcgttggcggtgatgct 182 |||||||||||| |||| ||| ||||||||||||| Sbjct: 1942766 gatggcggcggtggggattgcgatggcggtgatgct 1942731
>dbj|D13895.1|BMOANTICT Bombyx mori mRNA for antichymotrypsin, complete cds Length = 1268 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gagatggcggcggtctggat 164 |||||||||||||||||||| Sbjct: 1116 gagatggcggcggtctggat 1097
>gb|AF406383.1| Uncultured alpha proteobacterium clone AEGEAN_246_27F 16S ribosomal RNA gene, partial sequence Length = 269 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gactcagtcccaatgaggct 276 |||||||||||||||||||| Sbjct: 264 gactcagtcccaatgaggct 245
>gb|AC159642.2| Mus musculus BAC clone RP23-415N22 from chromosome 12, complete sequence Length = 197100 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 tgttgcagttatttttctcgggat 416 ||||||||||||| |||||||||| Sbjct: 192158 tgttgcagttattattctcgggat 192135
>gb|AC124539.4| Mus musculus BAC clone RP23-359M14 from chromosome 12, complete sequence Length = 183684 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 tgttgcagttatttttctcgggat 416 ||||||||||||| |||||||||| Sbjct: 70825 tgttgcagttattattctcgggat 70802
>emb|Z23142.1|SSENDOGA S.scrofa endoglin mRNA, complete CDS Length = 2908 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 2121 ggtggcggtggctgccccgg 2140
>emb|X72012.1|HSENDOG H.sapiens end mRNA for endoglin Length = 3073 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 2294 ggtggcggtggctgccccgg 2313
>emb|X81476.2|HSHPFH3EH Homo sapiens HPFH-3 gene enhancer (3' region) Length = 5846 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tggtgtgttcaaaggatggt 375 |||||||||||||||||||| Sbjct: 338 tggtgtgttcaaaggatggt 319
>gb|J05481.1|HUMENDO Human endoglin mRNA, 3' end Length = 2620 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggcggtggctgccccgg 217 |||||||||||||||||||| Sbjct: 1839 ggtggcggtggctgccccgg 1858 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,503,725 Number of Sequences: 3902068 Number of extensions: 3503725 Number of successful extensions: 69136 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68745 Number of HSP's gapped (non-prelim): 387 length of query: 443 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 421 effective length of database: 17,147,199,772 effective search space: 7218971104012 effective search space used: 7218971104012 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)