>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
            stimulating factor) (Superficial zone proteoglycan)
            [Contains: Proteoglycan-4 C-terminal part]
          Length = 1404

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 191  VQPQPNQLTYHNGAVLHGDIPVSVLWYGRFTAAQKAI 301
            +Q  P +L Y +  VLH ++ VS+LW G       AI
Sbjct: 1318 IQYSPARLAYQDKGVLHNEVKVSILWRGLPNVVTSAI 1354

>EFP_MYCPA (Q741J3) Elongation factor P (EF-P)|
          Length = 187

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +2

Query: 185 FLVQPQPNQLTYHNGAVLHGDIPVSV 262
           FL++  P Q+ +HNG+ L+ ++PVSV
Sbjct: 104 FLLEGMPVQVAFHNGSPLYIELPVSV 129

>EFP_MYCTU (P64034) Elongation factor P (EF-P)|
          Length = 187

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +2

Query: 185 FLVQPQPNQLTYHNGAVLHGDIPVSV 262
           FL++  P Q+ +HNG  L+ ++PV+V
Sbjct: 104 FLLEGMPVQVAFHNGVPLYIELPVTV 129

>EFP_MYCBO (P64035) Elongation factor P (EF-P)|
          Length = 187

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +2

Query: 185 FLVQPQPNQLTYHNGAVLHGDIPVSV 262
           FL++  P Q+ +HNG  L+ ++PV+V
Sbjct: 104 FLLEGMPVQVAFHNGVPLYIELPVTV 129

>HYPB_AZOCH (Q43949) Hydrogenase nickel incorporation protein hypB|
          Length = 305

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +1

Query: 127 GARR*HGSRVGHREHEEAHVPGPAPAE 207
           G    HG   GH  H+ A V  PAPAE
Sbjct: 16  GEHHHHGYDHGHHHHDHAFVRRPAPAE 42

>SYV_NEIG1 (Q5F5W0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 945

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -1

Query: 286 RREAAVPEDGDGDVAVQHGAVVVRELVRLGLDQEHELPR 170
           R+ AA+PE GD  VAV +GA   R ++++ +D+  E  R
Sbjct: 851 RQVAALPESGDAPVAVCNGA---RLMLKVEIDKAAETAR 886

>EFP_COREF (Q8FT34) Elongation factor P (EF-P)|
          Length = 187

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +2

Query: 185 FLVQPQPNQLTYHNGAVLHGDIPVSV 262
           FL++    Q+++H+G  L G++PVSV
Sbjct: 104 FLLENMRVQVSFHDGEALFGELPVSV 129

>DPYL3_XENLA (O13022) Dihydropyrimidinase-related protein 3 (DRP-3)|
           (Neural-specific protein 1)
          Length = 571

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 191 VQPQPNQLTYHNGAVLHGDIPVSVLWYGRFTAAQKAIVSD 310
           + P P    Y N  +  GD+ V+   +  F+ AQKAI  D
Sbjct: 307 LSPDPTTPDYINSLLASGDLQVTGSAHATFSTAQKAIGKD 346

>PHHY_ACIAD (Q03298) P-hydroxybenzoate hydroxylase (EC 1.14.13.2)|
           (4-hydroxybenzoate 3-monooxygenase)
          Length = 404

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -2

Query: 423 CLPTAAALERYSWWM--LLHHWDT 358
           CL      ER+SWWM  LLH ++T
Sbjct: 334 CLQRVWKAERFSWWMTHLLHRFET 357

>EFP_CORGL (Q45288) Elongation factor P (EF-P)|
          Length = 187

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 185 FLVQPQPNQLTYHNGAVLHGDIPVSV 262
           FL++    Q+++H G  L G++PVSV
Sbjct: 104 FLLENMRVQVSFHEGEALFGELPVSV 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.136    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,582,438
Number of Sequences: 219361
Number of extensions: 654810
Number of successful extensions: 2458
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2431
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)