ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart51b03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL590663.13| Human DNA sequence from clone RP11-11M11 on chromosome 6, complete sequence Length = 56954 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 412 aaaataaacaaacagaaatgttatcttct 440 |||||||||||||| |||||||||||||| Sbjct: 39246 aaaataaacaaacaaaaatgttatcttct 39274
>gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B15 map mi238, complete sequence Length = 88770 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 413 aaataaacaaacagaaatgttatcttctt 441 ||||||||||||||||||||||| ||||| Sbjct: 45757 aaataaacaaacagaaatgttattttctt 45729
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 276 aggccggctgcgacctggcgatgc 299 |||||||||||||||||||||||| Sbjct: 2571401 aggccggctgcgacctggcgatgc 2571424
>gb|AC140233.3| Mus musculus BAC clone RP23-282N19 from chromosome 19, complete sequence Length = 195305 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 413 aaataaacaaacagaaatgttat 435 ||||||||||||||||||||||| Sbjct: 40107 aaataaacaaacagaaatgttat 40129
>gb|AC098876.4| Mus musculus BAC clone RP23-1O17 from 14, complete sequence Length = 234499 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 aaaaataaacaaacagaaatgtt 433 ||||||||||||||||||||||| Sbjct: 200105 aaaaataaacaaacagaaatgtt 200127
>gb|AC108484.25| Mus musculus strain 129/Sv clone ct7-293m19 map 19, complete sequence Length = 170321 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 413 aaataaacaaacagaaatgttat 435 ||||||||||||||||||||||| Sbjct: 49491 aaataaacaaacagaaatgttat 49513
>gb|AE008686.1|AE008686 Mus musculus T-cell receptor alpha/delta locus section 4 of 4 of the complete region Length = 461875 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 aaaaataaacaaacagaaatgtt 433 ||||||||||||||||||||||| Sbjct: 86983 aaaaataaacaaacagaaatgtt 87005
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 23 tctcctctcctctcctttcatcc 45 ||||||||||||||||||||||| Sbjct: 19175118 tctcctctcctctcctttcatcc 19175140
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 412 aaaataaacaaacagaaatgtta 434 ||||||||||||||||||||||| Sbjct: 91699 aaaataaacaaacagaaatgtta 91677
>gb|AC166103.4| Mus musculus BAC clone RP23-339J4 from chromosome 14, complete sequence Length = 214477 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaatgtt 433 ||||||||||||||||||||||| Sbjct: 89839 aaaaataaacaaacagaaatgtt 89817
>gb|AC005938.1|AC005938 Mus musculus chromosome 14 clone UWGC:mbac24 or RG:200P8 map 14D1-D2, complete sequence Length = 161871 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 aaaaataaacaaacagaaatgtt 433 ||||||||||||||||||||||| Sbjct: 110661 aaaaataaacaaacagaaatgtt 110683
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 23 tctcctctcctctcctttcatcc 45 ||||||||||||||||||||||| Sbjct: 108639 tctcctctcctctcctttcatcc 108661
>gb|AC150685.2| Mus musculus BAC clone RP23-239C12 from 19, complete sequence Length = 194627 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 413 aaataaacaaacagaaatgttat 435 ||||||||||||||||||||||| Sbjct: 14338 aaataaacaaacagaaatgttat 14316
>gb|M94080.1|MUSTCRVAD Mouse T-cell receptor (TCR V-alpha 16.1) gene exons 1-2, (TCR V-delta 3/V-alpha 6) gene exons 1-2, and (TCR V-delta 2) gene, exon 12 Length = 34476 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 aaaaataaacaaacagaaatgtt 433 ||||||||||||||||||||||| Sbjct: 6537 aaaaataaacaaacagaaatgtt 6559
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 accatctcctctcctctccttt 40 |||||||||||||||||||||| Sbjct: 468367 accatctcctctcctctccttt 468346
>gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H13, complete sequence Length = 152941 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 accatctcctctcctctccttt 40 |||||||||||||||||||||| Sbjct: 84918 accatctcctctcctctccttt 84897
>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence Length = 161757 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 tctcctctcctctcctttcatc 44 |||||||||||||||||||||| Sbjct: 55583 tctcctctcctctcctttcatc 55562
>gb|AC130841.4| Mus musculus BAC clone RP24-445L16 from chromosome 8, complete sequence Length = 174384 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 tctcctctcctctcctttcatc 44 |||||||||||||||||||||| Sbjct: 152175 tctcctctcctctcctttcatc 152154
>gb|AC121843.3| Mus musculus BAC clone RP24-80P19 from chromosome 5, complete sequence Length = 196947 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 cataccatctcctctcctctcc 37 |||||||||||||||||||||| Sbjct: 83946 cataccatctcctctcctctcc 83925
>gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, complete sequence Length = 163126 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 acaaaaataaacaaacagaaat 430 |||||||||||||||||||||| Sbjct: 2786 acaaaaataaacaaacagaaat 2807
>gb|AC090578.6| Homo sapiens chromosome 8, clone RP11-642C5, complete sequence Length = 187209 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 409 acaaaaataaacaaacagaaat 430 |||||||||||||||||||||| Sbjct: 1331 acaaaaataaacaaacagaaat 1310
>dbj|AP005231.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-78G22, complete sequence Length = 102488 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 374 catgcatgcattgtgcgtgtgtgtgc 399 |||||||||||||||| ||||||||| Sbjct: 27208 catgcatgcattgtgcatgtgtgtgc 27183
>gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, complete sequence Length = 161617 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 catgcatgcattgtgcgtgtgtgtg 398 ||||||||||||||| ||||||||| Sbjct: 133257 catgcatgcattgtgtgtgtgtgtg 133281
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 tctcctctcctctcctttcat 43 ||||||||||||||||||||| Sbjct: 1999920 tctcctctcctctcctttcat 1999900
>ref|XM_878074.1| PREDICTED: Bos taurus similar to STIP1 homology and U-box containing protein 1, transcript variant 3 (LOC504565), mRNA Length = 692 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 tgtgcgtgtgtgtgctgtgatgtga 409 |||| |||||||||||||||||||| Sbjct: 261 tgtgtgtgtgtgtgctgtgatgtga 285
>ref|XM_878033.1| PREDICTED: Bos taurus similar to STIP1 homology and U-box containing protein 1, transcript variant 2 (LOC504565), mRNA Length = 630 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 tgtgcgtgtgtgtgctgtgatgtga 409 |||| |||||||||||||||||||| Sbjct: 199 tgtgtgtgtgtgtgctgtgatgtga 223
>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060K21, complete sequence Length = 153973 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 tgcatgcattgtgcgtgtgtg 396 ||||||||||||||||||||| Sbjct: 44234 tgcatgcattgtgcgtgtgtg 44214
>gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, complete sequence Length = 215147 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 caaaaataaacaaacagaaat 430 ||||||||||||||||||||| Sbjct: 110731 caaaaataaacaaacagaaat 110751
>gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complete sequence Length = 220167 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 catgcatgcattgtgcgtgtgtgtg 398 ||||||||||||||| ||||||||| Sbjct: 62935 catgcatgcattgtgtgtgtgtgtg 62959
>gb|AY222992.1| Schistosoma japonicum clone ZZD1054 mRNA sequence Length = 1371 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 caaagcataccatctcctctc 31 ||||||||||||||||||||| Sbjct: 806 caaagcataccatctcctctc 826
>gb|AC155718.4| Mus musculus 10 BAC RP24-217J7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 155643 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 ccatctcctctcctctccttt 40 ||||||||||||||||||||| Sbjct: 30309 ccatctcctctcctctccttt 30289
>emb|AL391221.15| Human DNA sequence from clone RP11-771D21 on chromosome 6 Contains the 5' end of the PKHD1 gene for polycystic kidney and hepatic disease 1 (autosomal recessive) (TIG multiple domains-1, FCYT, ARPKD), a novel gene and the IL17 gene for interleukin 17 (cytotoxic T-lymphocyte-associated serine esterase 8) (CTLA8), complete sequence Length = 152546 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 acaaaaataaacaaacagaaa 429 ||||||||||||||||||||| Sbjct: 134567 acaaaaataaacaaacagaaa 134587
>emb|AL358792.24| Human DNA sequence from clone RP11-280M4 on chromosome 9 Contains the 5' end of the ASTN2 gene for astrotactin2 (KIAA0364) and a CpG island, complete sequence Length = 166931 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 ccatctcctctcctctccttt 40 ||||||||||||||||||||| Sbjct: 125650 ccatctcctctcctctccttt 125670
>gb|AY331713.1| Oryza sativa Osg6B-like gene, promoter region and 5' UTR Length = 1688 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 tgcatgcattgtgcgtgtgtg 396 ||||||||||||||||||||| Sbjct: 890 tgcatgcattgtgcgtgtgtg 870
>emb|AL714006.13| Mouse DNA sequence from clone RP23-173E15 on chromosome 4 Contains a novel gene and the 3' end of a novel gene, complete sequence Length = 196097 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 69705 catctcctctcctctcctttc 69685
>gb|AC154564.3| Mus musculus BAC clone RP23-402A16 from chromosome 16, complete sequence Length = 214128 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 aaataaacaaacagaaatgtt 433 ||||||||||||||||||||| Sbjct: 91132 aaataaacaaacagaaatgtt 91112
>gb|AE014182.1| Mus musculus piebald deletion region section 10 of 11 of the complete sequence Length = 400029 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 acaaaaataaacaaacagaaa 429 ||||||||||||||||||||| Sbjct: 52902 acaaaaataaacaaacagaaa 52882
>gb|AC011558.6| Homo sapiens chromosome 19 clone LLNLR-291F12, complete sequence Length = 43128 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 caaaaataaacaaacagaaat 430 ||||||||||||||||||||| Sbjct: 5863 caaaaataaacaaacagaaat 5843
>gb|AC069226.19| Homo sapiens 3 BAC RP11-426J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187303 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 tctcctctcctctcctttcat 43 ||||||||||||||||||||| Sbjct: 171828 tctcctctcctctcctttcat 171808
>gb|AC108211.3| Homo sapiens BAC clone RP11-511I14 from 4, complete sequence Length = 222457 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 aaataaacaaacagaaatgtt 433 ||||||||||||||||||||| Sbjct: 167239 aaataaacaaacagaaatgtt 167259
>gb|AC040927.18| Mus musculus chromosome 5, clone RP23-186A21, complete sequence Length = 206156 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 tctcctctcctctcctttcat 43 ||||||||||||||||||||| Sbjct: 147920 tctcctctcctctcctttcat 147940
>gb|AC161889.5| Mus musculus 10 BAC RP23-361O18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 ccatctcctctcctctccttt 40 ||||||||||||||||||||| Sbjct: 209098 ccatctcctctcctctccttt 209078
>dbj|AK009355.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310015D24 product:unclassifiable, full insert sequence Length = 1604 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 aaataaacaaacagaaatgtt 433 ||||||||||||||||||||| Sbjct: 822 aaataaacaaacagaaatgtt 802
>gb|AC148704.1| Macaca mulatta Major Histocompatibility Complex BAC MMU337E21, complete sequence Length = 147539 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 111065 catctcctctcctctcctttc 111045
>gb|AC148694.1| Macaca mulatta Major Histocompatibility Complex BAC MMU242A19, complete sequence Length = 208276 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 26041 catctcctctcctctcctttc 26021
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 tgcatgcattgtgcgtgtgtg 396 ||||||||||||||||||||| Sbjct: 21162075 tgcatgcattgtgcgtgtgtg 21162055
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 15676846 catctcctctcctctcctttc 15676826
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 18679299 catctcctctcctctcctttc 18679279 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 cgatgccgctgttgcctccgt 314 ||||||||||||||||||||| Sbjct: 9015351 cgatgccgctgttgcctccgt 9015331
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 164212 catctcctctcctctcctttc 164192
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 1516461 catctcctctcctctcctttc 1516481
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 cgatgccgctgttgcctccgt 314 ||||||||||||||||||||| Sbjct: 25661 cgatgccgctgttgcctccgt 25641
>dbj|AP005064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049G15 Length = 155303 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 cgatgccgctgttgcctccgt 314 ||||||||||||||||||||| Sbjct: 117013 cgatgccgctgttgcctccgt 116993
>emb|AL928976.4| Zebrafish DNA sequence from clone CH211-134B16, complete sequence Length = 173937 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 407 tgacaaaaataaacaaacagaaatg 431 ||||||||||||| ||||||||||| Sbjct: 94972 tgacaaaaataaagaaacagaaatg 94996
>dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1756_G07 Length = 149457 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 106569 catctcctctcctctcctttc 106549
>emb|AL391154.4|CNS06C80 Human chromosome 14 DNA sequence BAC R-413F8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 182952 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gacaaaaataaacaaacagaa 428 ||||||||||||||||||||| Sbjct: 15983 gacaaaaataaacaaacagaa 16003
>dbj|AK066660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E16, full insert sequence Length = 641 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 5 catctcctctcctctcctttc 25
>gb|AC107632.21| Mus musculus chromosome 9, clone RP23-6I5, complete sequence Length = 201942 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gggtgtgtgccctgccctgaagggaagtt 201 ||||||||| |||||||||||| |||||| Sbjct: 103458 gggtgtgtggcctgccctgaagtgaagtt 103486
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 catctcctctcctctcctttc 41 ||||||||||||||||||||| Sbjct: 15685087 catctcctctcctctcctttc 15685067
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 tgcatgcattgtgcgtgtgtg 396 ||||||||||||||||||||| Sbjct: 21472316 tgcatgcattgtgcgtgtgtg 21472296
>emb|AL391155.3|CNS06C81 Human chromosome 14 DNA sequence BAC R-559M6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 160550 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gacaaaaataaacaaacagaa 428 ||||||||||||||||||||| Sbjct: 121704 gacaaaaataaacaaacagaa 121724
>gb|AC164875.14| Mus musculus chromosome 1, clone RP23-59P14, complete sequence Length = 250957 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 tctcctctcctctcctttcat 43 ||||||||||||||||||||| Sbjct: 159811 tctcctctcctctcctttcat 159791
>emb|AL929163.5| Mouse DNA sequence from clone RP23-450P9 on chromosome 2, complete sequence Length = 184256 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 tctcctctcctctcctttcat 43 ||||||||||||||||||||| Sbjct: 56742 tctcctctcctctcctttcat 56722
>dbj|D21160.1|RICASP2 Rice Osg6B gene for anther specific protein, complete cds (exon1, exon2, exon3) Length = 3640 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 tgcatgcattgtgcgtgtgtg 396 ||||||||||||||||||||| Sbjct: 906 tgcatgcattgtgcgtgtgtg 886
>emb|AL806534.3| Mouse DNA sequence from clone RP23-334A11 on chromosome X, complete sequence Length = 130689 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 acaaaaataaacaaacagaaa 429 ||||||||||||||||||||| Sbjct: 63312 acaaaaataaacaaacagaaa 63292
>dbj|AP003532.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822P1, complete sequences Length = 204928 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 catgcatgcattgtgcgtgtgtgtg 398 ||||||||||||||| ||||||||| Sbjct: 180080 catgcatgcattgtgtgtgtgtgtg 180056
>emb|AL670838.3| Mouse DNA sequence from clone RP23-474L1 on chromosome 4, complete sequence Length = 114419 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 tctcctctcctctcctttcat 43 ||||||||||||||||||||| Sbjct: 49121 tctcctctcctctcctttcat 49141
>gb|AC009749.9| Drosophila melanogaster clone BACR40I04, complete sequence Length = 161276 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 102757 aaaaataaacaaacagaaat 102738
>ref|NM_113303.2| Arabidopsis thaliana unknown protein AT3G23980 mRNA, complete cds Length = 2887 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 acaaacagaaatgttatctt 438 |||||||||||||||||||| Sbjct: 1736 acaaacagaaatgttatctt 1755
>gb|AC154521.2| Mus musculus BAC clone RP23-473O6 from chromosome 13, complete sequence Length = 211603 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acaaaaataaacaaacagaa 428 |||||||||||||||||||| Sbjct: 135306 acaaaaataaacaaacagaa 135325
>gb|AY816317.1| Ajellomyces capsulatus FLU1 (FLU1) gene, complete cds, alternatively spliced Length = 3995 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcaagttcaccgccgtcttg 82 |||||||||||||||||||| Sbjct: 2568 tcaagttcaccgccgtcttg 2549
>gb|AC115011.27| Mus musculus chromosome 1, clone RP24-192A11, complete sequence Length = 173802 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tgcattgtgcgtgtgtgtgc 399 |||||||||||||||||||| Sbjct: 141625 tgcattgtgcgtgtgtgtgc 141606
>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence Length = 245358 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ataaacaaacagaaatgtta 434 |||||||||||||||||||| Sbjct: 87019 ataaacaaacagaaatgtta 87038
>gb|U67418.1|ECU67418 Equus caballus UCD-E-CA-493 dinucleotide repeat region, complete sequence Length = 325 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 atgcattgtgcgtgtgtgtg 398 |||||||||||||||||||| Sbjct: 24 atgcattgtgcgtgtgtgtg 43
>gb|AC123599.6| Mus musculus chromosome 5, clone RP23-231D13, complete sequence Length = 191607 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ctcctctcctctcctttcat 43 |||||||||||||||||||| Sbjct: 102748 ctcctctcctctcctttcat 102729
>gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, complete sequence Length = 192016 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ataaacaaacagaaatgtta 434 |||||||||||||||||||| Sbjct: 191988 ataaacaaacagaaatgtta 191969
>gb|AC114651.11| Mus musculus chromosome 1, clone RP24-153E5, complete sequence Length = 176384 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgcattgtgcgtgtgtgtgc 399 |||||||||||||||||||| Sbjct: 146913 tgcattgtgcgtgtgtgtgc 146932
>gb|AC127951.4| Rattus norvegicus 18 BAC CH230-150D9 (Children's Hospital Oakland Research Institute) complete sequence Length = 164101 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ttgtgcgtgtgtgtgctgtg 403 |||||||||||||||||||| Sbjct: 99453 ttgtgcgtgtgtgtgctgtg 99434
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 237425 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 atgcatgcattgtgcgtgtgtgtg 398 |||||||||||||| ||||||||| Sbjct: 222529 atgcatgcattgtgtgtgtgtgtg 222506
>gb|BC068315.1| Mus musculus ectodysplasin-A receptor, mRNA (cDNA clone MGC:76714 IMAGE:30098537), complete cds Length = 3665 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 tgtgtgccctgccctgaagggaagttct 203 |||||||||||||||| || |||||||| Sbjct: 428 tgtgtgccctgccctgcagagaagttct 455
>gb|AC142265.4| Mus musculus BAC clone RP24-360F24 from chromosome Y, complete sequence Length = 164772 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 caaaaataaacaaacagaaa 429 |||||||||||||||||||| Sbjct: 62051 caaaaataaacaaacagaaa 62032
>gb|AC131669.3| Mus musculus BAC clone RP23-307E9 from chromosome 7, complete sequence Length = 189956 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 acaaaaataaacaaacagaaatgt 432 ||||||||||||||||| |||||| Sbjct: 69554 acaaaaataaacaaacaaaaatgt 69577
>gb|AC163095.6| Mus musculus chromosome 18, clone RP23-208G10, complete sequence Length = 181707 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 84315 aaaaataaacaaacagaaat 84296
>gb|AC161228.7| Mus musculus chromosome 3, clone RP24-77I5, complete sequence Length = 222551 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 catctcctctcctctcctttcatc 44 ||||||| |||||||||||||||| Sbjct: 66102 catctccgctcctctcctttcatc 66125
>gb|AC118639.12| Mus musculus chromosome 15, clone RP24-112I4, complete sequence Length = 166053 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atctcctctcctctcctttc 41 |||||||||||||||||||| Sbjct: 30678 atctcctctcctctcctttc 30659
>gb|AY278861.1| Embellisia novae-zelandiae small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 665 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 376 aaaaataaacaaacagaaat 357
>gb|AY278860.1| Embellisia hyacinthi small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 376 aaaaataaacaaacagaaat 357
>gb|AY278859.1| Embellisia proteae small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 667 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 376 aaaaataaacaaacagaaat 357
>gb|AY278857.1| Embellisia allii small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 660 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 376 aaaaataaacaaacagaaat 357
>gb|AY278856.1| Nimbya caricis small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 671 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 376 aaaaataaacaaacagaaat 357
>gb|AC124669.8| Mus musculus chromosome 1, clone RP23-110B5, complete sequence Length = 201456 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 tgtgcgtgtgtgtgctgtgatgtg 408 |||| ||||||||||||||||||| Sbjct: 82271 tgtgtgtgtgtgtgctgtgatgtg 82294
>ref|XM_972667.1| PREDICTED: Mus musculus similar to Tumor necrosis factor receptor superfamily member EDAR precursor (Anhidrotic ectodysplasin receptor 1) (Ectodysplasin-A receptor) (Ectodermal dysplasia receptor) (Downless) (LOC669001), mRNA Length = 3456 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 tgtgtgccctgccctgaagggaagttct 203 |||||||||||||||| || |||||||| Sbjct: 244 tgtgtgccctgccctgcagagaagttct 271
>gb|AC102392.8| Mus musculus chromosome 3, clone RP24-122I22, complete sequence Length = 201067 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 tgcatgcattgtgcgtgtgtgtgc 399 ||||||||||||| |||||||||| Sbjct: 135843 tgcatgcattgtgtgtgtgtgtgc 135866
>gb|AC140258.4| Mus musculus BAC clone RP24-295F23 from chromosome Y, complete sequence Length = 176758 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 caaaaataaacaaacagaaa 429 |||||||||||||||||||| Sbjct: 12620 caaaaataaacaaacagaaa 12639
>gb|AC144582.3| Mus musculus BAC clone RP24-323J22 from chromosome Y, complete sequence Length = 214364 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 caaaaataaacaaacagaaa 429 |||||||||||||||||||| Sbjct: 83922 caaaaataaacaaacagaaa 83941
>gb|AC140474.3| Mus musculus BAC clone RP24-406O7 from chromosome Y, complete sequence Length = 123100 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 caaaaataaacaaacagaaa 429 |||||||||||||||||||| Sbjct: 71222 caaaaataaacaaacagaaa 71203
>gb|AC126435.3| Mus musculus BAC clone RP24-158D10 from chromosome 7, complete sequence Length = 128390 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 14827 aaaaataaacaaacagaaat 14808
>gb|AC129606.4| Mus musculus BAC clone RP23-128L6 from 8, complete sequence Length = 235915 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tctcctctcctctcctttca 42 |||||||||||||||||||| Sbjct: 143223 tctcctctcctctcctttca 143242
>gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complete sequence Length = 200088 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 catctcctctcctctcctttcatc 44 ||||||| |||||||||||||||| Sbjct: 7626 catctccgctcctctcctttcatc 7603
>gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete sequence Length = 214995 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 9380 aaaaataaacaaacagaaat 9361
>gb|AC026281.10| Homo sapiens BAC clone RP11-379F11 from 7, complete sequence Length = 52678 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 tgatgtgacaaaaataaacaaacagaaa 429 ||||| || ||||||||||||||||||| Sbjct: 8951 tgatgagaaaaaaataaacaaacagaaa 8978
>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence Length = 198281 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 84218 aaaaataaacaaacagaaat 84237
>ref|NM_010100.1| Mus musculus ectodysplasin-A receptor (Edar), mRNA Length = 3720 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 tgtgtgccctgccctgaagggaagttct 203 |||||||||||||||| || |||||||| Sbjct: 470 tgtgtgccctgccctgcagagaagttct 497
>emb|AL583848.9| Human DNA sequence from clone RP11-259F4 on chromosome 13 Contains a novel transcript and a CpG island, complete sequence Length = 70527 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 tgacaaaaataaacaaacag 426 |||||||||||||||||||| Sbjct: 27 tgacaaaaataaacaaacag 8
>emb|AL358235.16| Human DNA sequence from clone RP11-196N24 on chromosome 10 Contains the 5' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)), the ribosomal protein L13a pseudogene 5 (RPL13AP5) and a CpG island, complete sequence Length = 106506 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tctcctctcctctcctttca 42 |||||||||||||||||||| Sbjct: 84117 tctcctctcctctcctttca 84098
>gb|AC012391.10| Homo sapiens chromosome 10 clone RP11-162A23, complete sequence Length = 181948 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 ctgtgatgtgacaaaaataa 418 |||||||||||||||||||| Sbjct: 111208 ctgtgatgtgacaaaaataa 111189
>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 176422 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 tgtgcgtgtgtgtgctgtgatgtg 408 |||| ||||||||||||||||||| Sbjct: 74321 tgtgtgtgtgtgtgctgtgatgtg 74344
>emb|AL161431.28| Human DNA sequence from clone RP11-54H7 on chromosome 13 Contains the 3' end a novel gene (including KIAA0865) possible ortholog of rat myosin heavy chain Myr 8 (Loc192253) and 2 novel genes, complete sequence Length = 143802 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 tgacaaaaataaacaaacag 426 |||||||||||||||||||| Sbjct: 143729 tgacaaaaataaacaaacag 143710
>gb|AC161149.6| Mus musculus BAC clone RP23-350B16 from chromosome 1, complete sequence Length = 217329 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 tgtgcgtgtgtgtgctgtgatgtg 408 ||||| |||||||||||||||||| Sbjct: 100822 tgtgcatgtgtgtgctgtgatgtg 100845
>gb|AC166081.3| Mus musculus 10 BAC RP24-184F11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161394 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 tgtgtgccctgccctgaagggaagttct 203 |||||||||||||||| || |||||||| Sbjct: 129161 tgtgtgccctgccctgcagagaagttct 129188
>gb|AY956775.1| Embellisia chlamydospora strain CBS317.78 small subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 327 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 221 aaaaataaacaaacagaaat 202
>gb|AY956774.1| Embellisia chlamydospora strain CBS717.71 small subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 327 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 221 aaaaataaacaaacagaaat 202
>gb|AY956773.1| Embellisia chlamydospora strain SFC04052801 small subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 327 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 221 aaaaataaacaaacagaaat 202
>gb|AY956772.1| Embellisia sp. DAR77254 small subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 329 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 221 aaaaataaacaaacagaaat 202
>gb|AY956771.1| Embellisia sp. DAR77253 small subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 330 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 221 aaaaataaacaaacagaaat 202
>gb|AY956770.1| Embellisia allii strain SFC04052804 small subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 328 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 221 aaaaataaacaaacagaaat 202
>emb|BX640857.1|HSM806973 Homo sapiens genomic DNA; cDNA DKFZp686H09245 (from clone DKFZp686H09245) Length = 4898 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaatgtta 434 ||||||||||| |||||||||||| Sbjct: 2792 aaaaataaacagacagaaatgtta 2769
>emb|BX957332.10| Zebrafish DNA sequence from clone DKEY-170K13 in linkage group 19, complete sequence Length = 141125 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 caaaaataaacaaacagaaatgtt 433 |||||||||||||| ||||||||| Sbjct: 30821 caaaaataaacaaaaagaaatgtt 30798
>emb|CR383677.15| Zebrafish DNA sequence from clone CH211-157P16 in linkage group 12, complete sequence Length = 164387 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 atgtgacaaaaataaacaaa 423 |||||||||||||||||||| Sbjct: 98244 atgtgacaaaaataaacaaa 98225
>gb|AC099787.2| Homo sapiens chromosome 1 clone RP4-538N4, complete sequence Length = 177329 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 caaaaataaacaaacagaaa 429 |||||||||||||||||||| Sbjct: 138296 caaaaataaacaaacagaaa 138315
>gb|AC010519.8| Homo sapiens chromosome 19 clone LLNLR-261D9, complete sequence Length = 46741 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 caaaaataaacaaacagaaa 429 |||||||||||||||||||| Sbjct: 45115 caaaaataaacaaacagaaa 45134
>gb|AC008745.7| Homo sapiens chromosome 19 clone CTD-2571L23, complete sequence Length = 180531 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 caaaaataaacaaacagaaa 429 |||||||||||||||||||| Sbjct: 2200 caaaaataaacaaacagaaa 2219
>gb|AY994157.1| Anisakis simplex mitochondrion, complete genome Length = 13916 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 aaaataaacaaacagaaatg 431 |||||||||||||||||||| Sbjct: 5152 aaaataaacaaacagaaatg 5133
>gb|AC083913.2| Genomic sequence for Mus musculus, clone RP23-376A14, complete sequence Length = 218940 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 acaaaaataaacaaacagaa 428 |||||||||||||||||||| Sbjct: 7876 acaaaaataaacaaacagaa 7857
>gb|AF307017.1| Alternaria radicina strain ATCC58405 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 699 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>gb|AF307016.1| Alternaria radicina strain ATCC6503 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>gb|AC074211.3| Genomic sequence for Mus musculus, clone RP23-92G8, complete sequence Length = 212134 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acaaaaataaacaaacagaa 428 |||||||||||||||||||| Sbjct: 37824 acaaaaataaacaaacagaa 37843
>gb|AC093663.4| Homo sapiens BAC clone RP11-477G18 from 4, complete sequence Length = 171745 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 caaaaataaacaaacagaaa 429 |||||||||||||||||||| Sbjct: 34654 caaaaataaacaaacagaaa 34673
>gb|AC159232.2| Mus musculus BAC clone RP24-392E16 from chromosome 13, complete sequence Length = 169281 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tctcctctcctctcctttca 42 |||||||||||||||||||| Sbjct: 96531 tctcctctcctctcctttca 96512
>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216621 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 tgtgtgccctgccctgaagggaagttct 203 |||||||||||||||| || |||||||| Sbjct: 202977 tgtgtgccctgccctgcagagaagttct 202950
>gb|AF253322.1|AF253322 Homo sapiens cytochrome P450 (CYP1A1) and cytochrome P450 (CYP1A2) genes, complete cds Length = 43064 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ctcctctcctctcctttcat 43 |||||||||||||||||||| Sbjct: 41957 ctcctctcctctcctttcat 41976
>gb|AF229674.1|AF229674 Alternaria smyrnii strain EGS 37-093 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 699 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>gb|AF229673.1|AF229673 Alternaria selini strain EGS 25-198 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 698 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>gb|AF229670.1|AF229670 Alternaria radicina strain BMP 21-21-14 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>gb|AF229669.1|AF229669 Alternaria radicina strain BMP 21-21-07 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>gb|AF229668.1|AF229668 Alternaria radicina strain ATCC 96831 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>gb|AF229664.1|AF229664 Alternaria petroselini strain EGS 09-159 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 699 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>gb|AF229661.1|AF229661 Alternaria japonica strain ATCC 13618 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 660 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>gb|AF229654.1|AF229654 Alternaria carotiincultae strain EGS 26-010 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 374 aaaaataaacaaacagaaat 355
>emb|BX823191.1|CNS0A71S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 acaaacagaaatgttatctt 438 |||||||||||||||||||| Sbjct: 686 acaaacagaaatgttatctt 705
>gb|DQ022432.1| Homo sapiens cytochrome P450, family 1, subfamily A, polypeptide 2 (CYP1A2) gene, complete cds Length = 11113 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ctcctctcctctcctttcat 43 |||||||||||||||||||| Sbjct: 9910 ctcctctcctctcctttcat 9929
>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 226168 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 tgtgtgccctgccctgaagggaagttct 203 |||||||||||||||| || |||||||| Sbjct: 205850 tgtgtgccctgccctgcagagaagttct 205823
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 cggctgcgacctggcgatgccgct 303 ||||||||||||||||||| |||| Sbjct: 2050746 cggctgcgacctggcgatgacgct 2050769
>gb|AC091230.23| Homo sapiens chromosome 15, clone RP11-414J4, complete sequence Length = 206482 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ctcctctcctctcctttcat 43 |||||||||||||||||||| Sbjct: 117215 ctcctctcctctcctttcat 117196
>emb|AL590633.9| Mouse DNA sequence from clone RP23-211O23 on chromosome X, complete sequence Length = 179289 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 tgtgcgtgtgtgtgctgtgatgtg 408 |||||||||||||| ||||||||| Sbjct: 9526 tgtgcgtgtgtgtggtgtgatgtg 9549
>dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F14O13 Length = 106203 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 acaaacagaaatgttatctt 438 |||||||||||||||||||| Sbjct: 67269 acaaacagaaatgttatctt 67250
>ref|XM_310055.2| Anopheles gambiae str. PEST ENSANGP00000023485 (ENSANGG00000020291), partial mRNA Length = 1638 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgtgcgtgtgtgtgctgtga 404 |||||||||||||||||||| Sbjct: 78 tgtgcgtgtgtgtgctgtga 97
>gb|BC090502.1| Danio rerio cDNA clone IMAGE:7138155 Length = 1820 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 atgtgacaaaaataaacaaa 423 |||||||||||||||||||| Sbjct: 350 atgtgacaaaaataaacaaa 331
>emb|CR385044.5| Zebrafish DNA sequence from clone CH211-51N14 in linkage group 20, complete sequence Length = 59170 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 atgtgacaaaaataaacaaa 423 |||||||||||||||||||| Sbjct: 28330 atgtgacaaaaataaacaaa 28349
>gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete sequence Length = 70712 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tctcctctcctctcctttca 42 |||||||||||||||||||| Sbjct: 25959 tctcctctcctctcctttca 25978
>gb|AC115907.7| Mus musculus chromosome 3, clone RP24-476B18, complete sequence Length = 165131 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 caaaaataaacaaacagaaa 429 |||||||||||||||||||| Sbjct: 96738 caaaaataaacaaacagaaa 96757
>gb|AF160502.1|AF160502 Mus musculus ectodermal dysplasia receptor (dl) mRNA, complete cds Length = 3720 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 tgtgtgccctgccctgaagggaagttct 203 |||||||||||||||| || |||||||| Sbjct: 470 tgtgtgccctgccctgcagagaagttct 497
>gb|AC007052.4|AC007052 Homo sapiens chromosome 18, clone hRPK.411_H_24, complete sequence Length = 179726 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 aaaaataaacaaacagaaatgtta 434 ||||||||||| |||||||||||| Sbjct: 85549 aaaaataaacagacagaaatgtta 85572
>gb|AE003575.5| Drosophila melanogaster chromosome 2L, section 16 of 83 of the complete sequence Length = 330399 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 297309 aaaaataaacaaacagaaat 297328
>dbj|AP001692.1| Homo sapiens genomic DNA, chromosome 21q, section 36/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 tgacaaaaataaacaaacagaaat 430 ||||||| |||||||||||||||| Sbjct: 321236 tgacaaagataaacaaacagaaat 321259
>gb|AC113018.7| Mus musculus chromosome 5, clone RP23-183C18, complete sequence Length = 215671 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tctcctctcctctcctttca 42 |||||||||||||||||||| Sbjct: 85197 tctcctctcctctcctttca 85216
>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence Length = 203581 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tgtgcgtgtgtgtgctgtga 404 |||||||||||||||||||| Sbjct: 144725 tgtgcgtgtgtgtgctgtga 144706
>gb|AC121113.13| Mus musculus chromosome 1, clone RP23-53N22, complete sequence Length = 210381 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acaaaaataaacaaacagaa 428 |||||||||||||||||||| Sbjct: 40792 acaaaaataaacaaacagaa 40811
>emb|AL935325.14| Mouse DNA sequence from clone RP23-101O16 on chromosome 4, complete sequence Length = 133845 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 acaaaaataaacaaacagaa 428 |||||||||||||||||||| Sbjct: 51443 acaaaaataaacaaacagaa 51424
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 cgccgccgctctggccccggccac 123 ||||||||||| |||||||||||| Sbjct: 3345137 cgccgccgctcgggccccggccac 3345160
>gb|AC138151.3| Mus musculus BAC clone RP24-294E11 from 7, complete sequence Length = 203368 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 aaaaataaacaaacagaaat 430 |||||||||||||||||||| Sbjct: 35909 aaaaataaacaaacagaaat 35928
>gb|AC124593.4| Mus musculus BAC clone RP23-10D15 from 3, complete sequence Length = 187362 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tctcctctcctctcctttca 42 |||||||||||||||||||| Sbjct: 98371 tctcctctcctctcctttca 98352
>gb|AC140338.3| Mus musculus BAC clone RP23-240M3 from 10, complete sequence Length = 232876 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 417 aaacaaacagaaatgttatcttcttttc 444 ||||||||| |||||| ||||||||||| Sbjct: 167146 aaacaaacaaaaatgtcatcttcttttc 167119
>gb|AC140674.4| Mus musculus BAC clone RP23-368L9 from 3, complete sequence Length = 212854 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 tgcatgcattgtgcgtgtgtgtgc 399 ||||||||||||| |||||||||| Sbjct: 116148 tgcatgcattgtgtgtgtgtgtgc 116171
>gb|AC102776.10| Mus musculus chromosome 1, clone RP23-469D21, complete sequence Length = 190746 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 atgcatgcattgtgcgtgtgtgtg 398 |||||||||||||| ||||||||| Sbjct: 73090 atgcatgcattgtgtgtgtgtgtg 73113
>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence Length = 129237 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atctcctctcctctcctttc 41 |||||||||||||||||||| Sbjct: 14416 atctcctctcctctcctttc 14435
>emb|AL928732.7| Mouse DNA sequence from clone RP23-403C18 on chromosome 2, complete sequence Length = 149273 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 aaacaaacagaaatgttatc 436 |||||||||||||||||||| Sbjct: 119335 aaacaaacagaaatgttatc 119316
>emb|AL845293.5| Mouse DNA sequence from clone RP23-328P7 on chromosome 2, complete sequence Length = 212001 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 aaaaataaacaaacagaaatgtta 434 ||||||||| |||||||||||||| Sbjct: 185149 aaaaataaaaaaacagaaatgtta 185172
>dbj|AP001341.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B266G18, LL56-APP region, complete sequence Length = 122318 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 tgacaaaaataaacaaacagaaat 430 ||||||| |||||||||||||||| Sbjct: 40979 tgacaaagataaacaaacagaaat 41002
>emb|AL645753.11| Mouse DNA sequence from clone CT7-315N12 on chromosome 3, complete sequence Length = 145594 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tctcctctcctctcctttca 42 |||||||||||||||||||| Sbjct: 79216 tctcctctcctctcctttca 79235
>emb|AL691425.6| Mouse DNA sequence from clone RP23-232E4 on chromosome 3, complete sequence Length = 42679 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tctcctctcctctcctttca 42 |||||||||||||||||||| Sbjct: 15025 tctcctctcctctcctttca 15044 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,351,567 Number of Sequences: 3902068 Number of extensions: 4351567 Number of successful extensions: 260731 Number of sequences better than 10.0: 170 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 259114 Number of HSP's gapped (non-prelim): 1615 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
