>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor|
          Length = 254

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 29/79 (36%), Positives = 46/79 (58%)
 Frame = +2

Query: 209 VLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSGMTVFAPTDNAFTSLASGTLNSLSDS 388
           +L+ AG F+TF+  L STGV     NQ NN+   G+T+F P D+AF +  +  L++L+  
Sbjct: 50  LLSVAGPFHTFLDYLLSTGVIETFQNQANNT-EEGITIFVPKDDAFKAQKNPPLSNLTKD 108

Query: 389 QKNALIQYHVLSTAIPMSQ 445
           Q   L+ +H L     +S+
Sbjct: 109 QLKQLVLFHALPHYYSLSE 127

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 28/77 (36%), Positives = 44/77 (57%)
 Frame = +2

Query: 206 GVLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSGMTVFAPTDNAFTSLASGTLNSLSD 385
           G+L KAG   TF  LL S+GV    ++ +      G+TVFAP+D AF +     L +L+ 
Sbjct: 193 GLLEKAG-CKTFANLLVSSGVIKTFESTVEK----GLTVFAPSDEAFKARGVPDLTNLTQ 247

Query: 386 SQKNALIQYHVLSTAIP 436
           ++  +L++YH L+   P
Sbjct: 248 AEVVSLLEYHALAEYKP 264

>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 28/77 (36%), Positives = 43/77 (55%)
 Frame = +2

Query: 206 GVLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSGMTVFAPTDNAFTSLASGTLNSLSD 385
           G+L KAG   TF  LL S+GV    ++ +      G+TVFAP+D AF +     L  L+ 
Sbjct: 192 GLLEKAG-CKTFANLLVSSGVLKTYESAVEK----GLTVFAPSDEAFKAEGVPDLTKLTQ 246

Query: 386 SQKNALIQYHVLSTAIP 436
           ++  +L++YH L+   P
Sbjct: 247 AEVVSLLEYHALAEYKP 263

>POSTN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast-specific factor 2)|
           (OSF-2)
          Length = 838

 Score = 36.2 bits (82), Expect = 0.038
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +2

Query: 269 AAQIDNQLNNSFGSG--MTVFAPTDNAFTSLASGTLNSLSDSQ--KNALIQYHVLST 427
           AA I + L  S G     T+FAPT+ AF  L  G L  +   +    AL++YH+L+T
Sbjct: 254 AAAITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNT 310

>MP70_MYCTU (P0A668) Immunogenic protein MPT70 precursor|
          Length = 193

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
 Frame = +2

Query: 257 STGVAAQIDNQLN--NSFGSGM-TVFAPTDNAFTSLASGTLNSL--SDSQKNALIQYHVL 421
           +  ++ Q++ Q+N  ++  SG  TVFAPT+ AF+ L + T++ L  + S   +++ YHV+
Sbjct: 74  TAALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVV 133

Query: 422 S 424
           +
Sbjct: 134 A 134

>MP70_MYCBO (P0A669) Immunogenic protein MPB70 precursor|
          Length = 193

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
 Frame = +2

Query: 257 STGVAAQIDNQLN--NSFGSGM-TVFAPTDNAFTSLASGTLNSL--SDSQKNALIQYHVL 421
           +  ++ Q++ Q+N  ++  SG  TVFAPT+ AF+ L + T++ L  + S   +++ YHV+
Sbjct: 74  TAALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVV 133

Query: 422 S 424
           +
Sbjct: 134 A 134

>Y1483_SYNY3 (P74615) Hypothetical protein sll1483 precursor|
          Length = 180

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = +2

Query: 230 FNTFIRLLKSTGVAAQIDNQLNNSFGSGMTVFAPTDNAFTSLASGTLNS-LSDSQKNALI 406
           F+T +  +K+  +   +  +         TVFAPT++AF +L +GT+ S L    K+ L+
Sbjct: 58  FSTLVAAVKAADLVEALSAE------GPFTVFAPTNDAFAALPAGTVESLLLPENKDKLV 111

Query: 407 Q---YHVLSTAIPMSQ 445
           +   YHV+   I  +Q
Sbjct: 112 KILTYHVVPGKITAAQ 127

>POSTN_HUMAN (Q15063) Periostin precursor (PN) (Osteoblast-specific factor 2)|
           (OSF-2)
          Length = 836

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +2

Query: 269 AAQIDNQLNNSFGSG--MTVFAPTDNAFTSLASGTLNSLSDSQ--KNALIQYHVLST 427
           AA I + +  + G     T+FAPT+ AF  L  G L  +   +    AL++YH+L+T
Sbjct: 252 AAAITSDILEALGRDGHFTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNT 308

>Y1735_SYNY3 (P73392) Hypothetical protein sll1735|
          Length = 133

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +2

Query: 317 TVFAPTDNAFTSLASGTLNSLSDS--QKNALIQYHVLS 424
           TVFAPTD AF  L  GT+ +L  +  Q   ++ YHV++
Sbjct: 37  TVFAPTDTAFAKLPPGTITTLVQNIPQLARILTYHVVA 74

>MP83_MYCTU (P0A670) Cell surface lipoprotein MPT83 precursor (Lipoprotein p23)|
          Length = 220

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 284 NQLNNSFGSGMTVFAPTDNAFTSLASGTLNSLSDSQK--NALIQYHVLS 424
           N ++   G   TVFAPT+ AF  L + T++ L    K  ++++ YHV++
Sbjct: 112 NLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIA 160

>MP83_MYCBO (P0A671) Cell surface lipoprotein MPB83 precursor (Lipoprotein p23)|
          Length = 220

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 284 NQLNNSFGSGMTVFAPTDNAFTSLASGTLNSLSDSQK--NALIQYHVLS 424
           N ++   G   TVFAPT+ AF  L + T++ L    K  ++++ YHV++
Sbjct: 112 NLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIA 160

>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog|
          Length = 133

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +2

Query: 230 FNTFIRLLKSTGVAAQIDNQLNNSFGSGMTVFAPTDNAFTSLASGTLNSL--SDSQKNAL 403
           F+T +  +++ G+   +  +         TVFAP D+AF  L  GT+ +L  +  Q   +
Sbjct: 14  FSTLVAAVQAAGLVETLAGE------GDFTVFAPNDDAFAKLPPGTIQTLVQNPPQLARI 67

Query: 404 IQYHV 418
           + YHV
Sbjct: 68  LTYHV 72

>BGH3_RABIT (Q95215) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3) (Kerato-epithelin)
           (RGD-containing collagen-associated protein) (RGD-CAP)
          Length = 683

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +2

Query: 317 TVFAPTDNAFTSLASGTLNSLSDSQKNA--LIQYHV 418
           TVFAPT+ AF +L  G LN L  + K    +++YHV
Sbjct: 538 TVFAPTNEAFQALPPGELNKLLGNAKELADILKYHV 573

>BGH3_PIG (O11780) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3) (Kerato-epithelin)
           (RGD-containing collagen-associated protein) (RGD-CAP)
          Length = 683

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +2

Query: 209 VLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSGMTVFAPTDNAFTSLASGTLNSLSDS 388
           VL    +F+  +  ++S G+   ++ +         TVFAPT+ AF +L  G  N L  +
Sbjct: 508 VLKGDNRFSMLVAAIQSAGLTETLNRE------GVYTVFAPTNEAFQALPLGERNKLLGN 561

Query: 389 QKNA--LIQYHV 418
            K    +++YHV
Sbjct: 562 AKELANILKYHV 573

>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)|
          Length = 2570

 Score = 32.3 bits (72), Expect = 0.55
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +2

Query: 209 VLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSG-MTVFAPTDNAFTSLASGTLNSLSD 385
           +LA    F+ F  +L++ G+ + +D       G G  TVFAP++ A  SL  G L  L  
Sbjct: 512 ILASTEAFSRFETILENCGLPSILD-------GPGPFTVFAPSNEAVDSLRDGRLIYLFT 564

Query: 386 ---SQKNALIQYHV 418
              S+   L++YH+
Sbjct: 565 AGLSKLQELVRYHI 578

>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)|
          Length = 2571

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
 Frame = +2

Query: 209 VLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSG-MTVFAPTDNAFTSLASGTLNSLSD 385
           +LA    F  F  +L++ G+ + +D       G G  TVFAP++ A  SL  G L  L  
Sbjct: 513 ILASTEVFTRFETILENCGLPSILD-------GPGPFTVFAPSNEAVDSLRDGRLIYLFT 565

Query: 386 ---SQKNALIQYHV 418
              S+   L++YH+
Sbjct: 566 AGLSKLQELVRYHI 579

>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like|
           laminin-type EGF-like and link domain-containing
           scavenger receptor 1) (FAS1 EGF-like and X-link
           domain-containing adhesion molecule 2) (Hyaluronan
           receptor for endocytosis) [
          Length = 2551

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = +2

Query: 227 QFNTFIRLLKSTGVAAQIDNQLNNSFGSGMTVFAPTDNAFTSLASGTLNSLSDSQKN--- 397
           +++ F  LL+ T +   +D    +  G   T+F P + A  ++  GTL+ L   + +   
Sbjct: 527 RYSKFRSLLEETNLGHALDE---DGVGGPYTIFVPNNEALNNMKDGTLDYLLSPEGSRKL 583

Query: 398 -ALIQYHVL 421
             L++YH++
Sbjct: 584 LELVRYHIV 592

>BGH3_MOUSE (P82198) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3)
          Length = 683

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +2

Query: 209 VLAKAGQFNTFIRLLKSTGVAAQIDNQLNNSFGSGMTVFAPTDNAFTSLASGTLNSLSDS 388
           VL    +F+  +  ++S G+   ++ +         TVFAPT+ AF ++    LN L  +
Sbjct: 508 VLKGDNRFSMLVAAIQSAGLMEILNRE------GVYTVFAPTNEAFQAMPPEELNKLLAN 561

Query: 389 QKNA--LIQYHV 418
            K    +++YH+
Sbjct: 562 AKELTNILKYHI 573

>DSBD_VIBPA (Q87KW0) Thiol:disulfide interchange protein dsbD precursor (EC|
           1.8.1.8) (Protein-disulfide reductase) (Disulfide
           reductase)
          Length = 613

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 275 QIDNQLNNSFGSGMTVFAPTDNAF 346
           Q +N  NNSFGS    F P D AF
Sbjct: 27  QFNNSQNNSFGSSNDSFVPVDQAF 50

>DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
           (Diglyceride acyltransferase)
          Length = 491

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +1

Query: 184 GRHDEHHGGAGQGRAVQHVHPAAQVDGRGGADRQPAQQQLRERHDGV 324
           G     HGG G   A + V  AA     G A   PA    ++  DGV
Sbjct: 16  GSRPSSHGGGGPAAAEEEVRDAAAGPDMGAAGDAPAPAPSKDADDGV 62

>MP70_MYCKA (Q49614) Immunogenic protein MPT70 analog precursor (Fragment)|
          Length = 121

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +2

Query: 212 LAKAGQFNTFIRLLKSTGVAAQIDNQLN--NSFGSGM-TVFAPTDNAFTSLASGTLNSL 379
           +A A   N  +  L S  V+ +++ Q+N  ++  +G  TVFAPTD AF  L + T+  L
Sbjct: 58  VAVAASNNPMLTTLTSA-VSGRLNPQVNLVDTLNNGQYTVFAPTDPAFDKLPASTIVQL 115

>RUMA_RHOGE (Q9JP88) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 473

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 181 GGRHDEHHGGAGQGRAVQHVHPAAQV 258
           G  H   H GA  G  +QH+HPAAQV
Sbjct: 70  GCPHFGLHAGACGGCKMQHLHPAAQV 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,681,286
Number of Sequences: 219361
Number of extensions: 502985
Number of successful extensions: 2062
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)