ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart51a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 121 5e-25
2dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic D... 121 5e-25
3dbj|AK059089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 5e-25
4dbj|AK058424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 5e-25
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 2e-06
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 2e-06
7gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome... 60 2e-06
8dbj|AK070050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.024
9gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.024
10gb|AY260902.1| Rhodospirillum centenum che2 gene cluster, comple... 42 0.38
11gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 0.38
12gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 0.38
13gb|AE004627.1| Pseudomonas aeruginosa PAO1, section 188 of 529 o... 42 0.38
14gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 0.38
15gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 1.5
16ref|NM_195945.1| Oryza sativa (japonica cultivar-group) putative... 40 1.5
17gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosyntheti... 40 1.5
18gb|AF142435.1| Frankia sp. ACN14a/ts-r 20S proteasome beta-subun... 40 1.5
19emb|X89726.1|RLCYCHJKL R.leguminosarum DNA for cycH, cycJ, cycK ... 40 1.5
20dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 1.5
21gb|AC092749.1| Genomic sequence for Oryza sativa (japonica culti... 40 1.5
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
23gb|AY197568.1| Myxococcus xanthus isolate C257/780 hypothetical ... 40 1.5
24dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 1.5
25gb|AE005015.1| Halobacterium sp. NRC-1 section 46 of 170 of the ... 40 1.5
26emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 1.5
27gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, ... 40 1.5
28gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 1.5
29gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 1.5
30ref|NM_184858.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.9
31ref|NM_193526.1| Oryza sativa (japonica cultivar-group), predic... 38 5.9
32ref|XM_369708.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 5.9
33gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 38 5.9
34gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 38 5.9
35gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 38 5.9
36gb|AC093141.2| Felis catus clone RP86-512F4, complete sequence 38 5.9
37emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 38 5.9
38emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 38 5.9
39emb|AL596382.12| Mouse DNA sequence from clone RP23-337J7 on chr... 38 5.9
40gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 38 5.9
41gb|AE005806.1| Caulobacter crescentus CB15 section 132 of 359 of... 38 5.9
42gb|AE012225.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 5.9
43gb|CP000133.1| Rhizobium etli CFN 42, complete genome 38 5.9
44dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 5.9
45gb|AC156017.2| Mus musculus BAC clone RP24-239B9 from chromosome... 38 5.9
46gb|AY249529.1| Rhodococcus ruber aldh6-adh6 operon, complete seq... 38 5.9
47gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence 38 5.9
48gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 5.9
49gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 5.9
50dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.9
51dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 38 5.9
52gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinosta... 38 5.9
53gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic ... 38 5.9
54dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.9
55gb|AF463724.1| Mus musculus strain C57BL/6J cytokine gene cluste... 38 5.9
56gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 38 5.9
57dbj|AK110177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.9
58dbj|AK109872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.9
59dbj|AK106733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.9
60dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.9
61emb|CT009576.9| Mouse DNA sequence from clone RP23-36H10 on chro... 38 5.9 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  121 bits (61), Expect = 5e-25
 Identities = 103/117 (88%)
 Strand = Plus / Minus

                                                                            
Query: 10       ccccctggcccctggccggcgaagccgctcatcggcgacctcctcgacctcggggaggat 69
                ||||| || ||||||||| ||||||||||| |||||||||||||||||||||| ||||| 
Sbjct: 10688578 cccccgggtccctggccgccgaagccgctcgtcggcgacctcctcgacctcggcgaggac 10688519

                                                                         
Query: 70       ggccagcagcaccgcgcgttccagcgcctggccgaccgctatggtggcctcatgtgc 126
                ||| ||||||||||| ||||||  ||||| |||| |||||| || ||||||||||||
Sbjct: 10688518 ggcaagcagcaccgcacgttcctccgcctcgccggccgctacggcggcctcatgtgc 10688462
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>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0036B02
          Length = 168253

 Score =  121 bits (61), Expect = 5e-25
 Identities = 103/117 (88%)
 Strand = Plus / Minus

                                                                         
Query: 10    ccccctggcccctggccggcgaagccgctcatcggcgacctcctcgacctcggggaggat 69
             ||||| || ||||||||| ||||||||||| |||||||||||||||||||||| ||||| 
Sbjct: 41641 cccccgggtccctggccgccgaagccgctcgtcggcgacctcctcgacctcggcgaggac 41582

                                                                      
Query: 70    ggccagcagcaccgcgcgttccagcgcctggccgaccgctatggtggcctcatgtgc 126
             ||| ||||||||||| ||||||  ||||| |||| |||||| || ||||||||||||
Sbjct: 41581 ggcaagcagcaccgcacgttcctccgcctcgccggccgctacggcggcctcatgtgc 41525
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>dbj|AK059089.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B08, full
           insert sequence
          Length = 1743

 Score =  121 bits (61), Expect = 5e-25
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 10  ccccctggcccctggccggcgaagccgctcatcggcgacctcctcgacctcggggaggat 69
           ||||| || ||||||||| ||||||||||| |||||||||||||||||||||| ||||| 
Sbjct: 161 cccccgggtccctggccgccgaagccgctcgtcggcgacctcctcgacctcggcgaggac 220

                                                                    
Query: 70  ggccagcagcaccgcgcgttccagcgcctggccgaccgctatggtggcctcatgtgc 126
           ||| ||||||||||| ||||||  ||||| |||| |||||| || ||||||||||||
Sbjct: 221 ggcaagcagcaccgcacgttcctccgcctcgccggccgctacggcggcctcatgtgc 277
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>dbj|AK058424.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-D12, full
           insert sequence
          Length = 1411

 Score =  121 bits (61), Expect = 5e-25
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 10  ccccctggcccctggccggcgaagccgctcatcggcgacctcctcgacctcggggaggat 69
           ||||| || ||||||||| ||||||||||| |||||||||||||||||||||| ||||| 
Sbjct: 161 cccccgggtccctggccgccgaagccgctcgtcggcgacctcctcgacctcggcgaggac 220

                                                                    
Query: 70  ggccagcagcaccgcgcgttccagcgcctggccgaccgctatggtggcctcatgtgc 126
           ||| ||||||||||| ||||||  ||||| |||| |||||| || ||||||||||||
Sbjct: 221 ggcaagcagcaccgcacgttcctccgcctcgccggccgctacggcggcctcatgtgc 277
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                           
Query: 7       cttccccctggcccctggccggcgaagccgctcatcggcgacctcctcgacctcggggag 66
               ||||| || ||||| |||||| ||||||| ||||||||||||||||| | ||| ||| ||
Sbjct: 7872515 cttccacccggcccatggccgccgaagcctctcatcggcgacctccttgcccttgggaag 7872456

                                 
Query: 67      gatggccagcagcaccgc 84
               |  | |||||||||||||
Sbjct: 7872455 ggcgaccagcagcaccgc 7872438



 Score = 46.1 bits (23), Expect = 0.024
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 32      agccgctcatcggcgacctcctcgacctcgg 62
               |||||||||||||| || |||||||||||||
Sbjct: 7804566 agccgctcatcggcaacatcctcgacctcgg 7804536



 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 39       catcggcgacctcctcgacctcg 61
                |||||||||||||| ||||||||
Sbjct: 22178058 catcggcgacctccgcgacctcg 22178036
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                           
Query: 7       cttccccctggcccctggccggcgaagccgctcatcggcgacctcctcgacctcggggag 66
               ||||| || ||||| |||||| ||||||| ||||||||||||||||| | ||| ||| ||
Sbjct: 7870350 cttccacccggcccatggccgccgaagcctctcatcggcgacctccttgcccttgggaag 7870291

                                 
Query: 67      gatggccagcagcaccgc 84
               |  | |||||||||||||
Sbjct: 7870290 ggcgaccagcagcaccgc 7870273



 Score = 46.1 bits (23), Expect = 0.024
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 32      agccgctcatcggcgacctcctcgacctcgg 62
               |||||||||||||| || |||||||||||||
Sbjct: 7802401 agccgctcatcggcaacatcctcgacctcgg 7802371



 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 39       catcggcgacctcctcgacctcg 61
                |||||||||||||| ||||||||
Sbjct: 22171087 catcggcgacctccgcgacctcg 22171065
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>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030J04, complete sequence
          Length = 153431

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 7     cttccccctggcccctggccggcgaagccgctcatcggcgacctcctcgacctcggggag 66
             ||||| || ||||| |||||| ||||||| ||||||||||||||||| | ||| ||| ||
Sbjct: 58113 cttccacccggcccatggccgccgaagcctctcatcggcgacctccttgcccttgggaag 58054

                               
Query: 67    gatggccagcagcaccgc 84
             |  | |||||||||||||
Sbjct: 58053 ggcgaccagcagcaccgc 58036
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>dbj|AK070050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040I08, full
           insert sequence
          Length = 1583

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 32  agccgctcatcggcgacctcctcgacctcgg 62
           |||||||||||||| || |||||||||||||
Sbjct: 97  agccgctcatcggcaacatcctcgacctcgg 127
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>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0078P24, from chromosome 3, complete sequence
          Length = 146930

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 32    agccgctcatcggcgacctcctcgacctcgg 62
             |||||||||||||| || |||||||||||||
Sbjct: 49566 agccgctcatcggcaacatcctcgacctcgg 49596
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>gb|AY260902.1| Rhodospirillum centenum che2 gene cluster, complete sequence
          Length = 11332

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 83   gcgcgttccagcgcctggccg 103
            |||||||||||||||||||||
Sbjct: 2815 gcgcgttccagcgcctggccg 2795
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     cctcggggaggatggccagca 77
              |||||||||||||||||||||
Sbjct: 677079 cctcggggaggatggccagca 677099
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 70      ggccagcagcaccgcgcgttc 90
               |||||||||||||||||||||
Sbjct: 1291311 ggccagcagcaccgcgcgttc 1291331
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>gb|AE004627.1| Pseudomonas aeruginosa PAO1, section 188 of 529 of the complete
           genome
          Length = 12776

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  ggccagcagcaccgcgcgttccagc 94
           ||||||||||| |||||||||||||
Sbjct: 447 ggccagcagcagcgcgcgttccagc 471
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 95      gcctggccgaccgctatggtg 115
               |||||||||||||||||||||
Sbjct: 6078300 gcctggccgaccgctatggtg 6078280
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     agcaccgcgcgttccagcgc 96
              ||||||||||||||||||||
Sbjct: 922894 agcaccgcgcgttccagcgc 922913



 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 80     accgcgcgttccagcgcctggcc 102
              |||||||||||| ||||||||||
Sbjct: 271782 accgcgcgttcctgcgcctggcc 271804
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>ref|NM_195945.1| Oryza sativa (japonica cultivar-group) putative Cytochrome P450
           (OSJNBb0023M11.14), mRNA
          Length = 1557

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 34  ccgctcatcggcgacctcctcgac 57
           |||||||||||| |||||||||||
Sbjct: 115 ccgctcatcggcaacctcctcgac 138
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>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster,
             complete sequence
          Length = 135638

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    cgcgttccagcgcctggccg 103
             ||||||||||||||||||||
Sbjct: 84466 cgcgttccagcgcctggccg 84485
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>gb|AF142435.1| Frankia sp. ACN14a/ts-r 20S proteasome beta-subunit precursor (prcB)
            and 20S proteasome alpha-subunit (prcA) genes, complete
            cds; putative dienelactone hydrolase-like protein gene,
            partial cds; and unknown genes
          Length = 4725

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   cggcgacctcctcgacctcg 61
            ||||||||||||||||||||
Sbjct: 2137 cggcgacctcctcgacctcg 2118
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>emb|X89726.1|RLCYCHJKL R.leguminosarum DNA for cycH, cycJ, cycK and cycL genes
          Length = 4237

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   gaggatggccagcagcaccg 83
            ||||||||||||||||||||
Sbjct: 2581 gaggatggccagcagcaccg 2562
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      cgcctggccgaccgctatgg 113
               ||||||||||||||||||||
Sbjct: 1357956 cgcctggccgaccgctatgg 1357937
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>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBb0023M11, from chromosome 10,
             complete sequence
          Length = 138668

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    ccgctcatcggcgacctcctcgac 57
             |||||||||||| |||||||||||
Sbjct: 71034 ccgctcatcggcaacctcctcgac 71011
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 34       ccgctcatcggcgacctcctcgac 57
                |||||||||||| |||||||||||
Sbjct: 10150813 ccgctcatcggcaacctcctcgac 10150790
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>gb|AY197568.1| Myxococcus xanthus isolate C257/780 hypothetical adventurous gliding
            motility protein M (agmM), hypothetical TPR-like protein,
            and adventurous gliding motility protein R (agmR) genes,
            complete cds
          Length = 4461

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    tccccctggcccctggccgg 28
            ||||||||||||||||||||
Sbjct: 2055 tccccctggcccctggccgg 2074
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 24      gccggcgaagccgctcatcg 43
               ||||||||||||||||||||
Sbjct: 2445766 gccggcgaagccgctcatcg 2445747
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>gb|AE005015.1| Halobacterium sp. NRC-1 section 46 of 170 of the complete genome
          Length = 10048

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   tccagcgcctggccgaccgc 108
            ||||||||||||||||||||
Sbjct: 7577 tccagcgcctggccgaccgc 7596
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      cgcctggccgaccgctatgg 113
               ||||||||||||||||||||
Sbjct: 2166007 cgcctggccgaccgctatgg 2165988



 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 90      ccagcgcctggccgaccgc 108
               |||||||||||||||||||
Sbjct: 3160275 ccagcgcctggccgaccgc 3160257
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>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds;
            chivosazol biosynthetic gene cluster, complete sequence;
            and hypothetical protein gene, complete cds
          Length = 96547

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   cctcctcgacctcggggagg 67
            ||||||||||||||||||||
Sbjct: 3883 cctcctcgacctcggggagg 3864
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      cgcctggccgaccgctatgg 113
               ||||||||||||||||||||
Sbjct: 1381543 cgcctggccgaccgctatgg 1381524
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 34       ccgctcatcggcgacctcctcgac 57
                |||||||||||| |||||||||||
Sbjct: 10156852 ccgctcatcggcaacctcctcgac 10156829
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>ref|NM_184858.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1887

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 39   catcggcgacctcctcgacctcg 61
            |||||||||||||| ||||||||
Sbjct: 1143 catcggcgacctccgcgacctcg 1165
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>ref|NM_193526.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1575

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 34  ccgctcatcggcgacctcctcgacctc 60
           |||||||||||| |||| |||||||||
Sbjct: 139 ccgctcatcggcaacctgctcgacctc 165
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>ref|XM_369708.1| Magnaporthe grisea 70-15 hypothetical protein (MG06223.4) partial
           mRNA
          Length = 477

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 42  cggcgacctcctcgacctcgggg 64
           |||||||||||||| ||||||||
Sbjct: 151 cggcgacctcctcggcctcgggg 129
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 88      ttccagcgcctggccgacc 106
               |||||||||||||||||||
Sbjct: 1438383 ttccagcgcctggccgacc 1438401
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 81      ccgcgcgttccagcgcctg 99
               |||||||||||||||||||
Sbjct: 1621820 ccgcgcgttccagcgcctg 1621802
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 45     cgacctcctcgacctcggg 63
              |||||||||||||||||||
Sbjct: 111967 cgacctcctcgacctcggg 111985
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>gb|AC093141.2| Felis catus clone RP86-512F4, complete sequence
          Length = 119353

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    cccctggcccctggccggc 29
             |||||||||||||||||||
Sbjct: 78960 cccctggcccctggccggc 78978
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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 83     gcgcgttccagcgcctggc 101
              |||||||||||||||||||
Sbjct: 223160 gcgcgttccagcgcctggc 223142
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 90     ccagcgcctggccgaccgc 108
              |||||||||||||||||||
Sbjct: 153207 ccagcgcctggccgaccgc 153189
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>emb|AL596382.12| Mouse DNA sequence from clone RP23-337J7 on chromosome 11, complete
              sequence
          Length = 225083

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      ttccccctggcccctggcc 26
              |||||||||||||||||||
Sbjct: 148922 ttccccctggcccctggcc 148940
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 45     cgacctcctcgacctcggg 63
              |||||||||||||||||||
Sbjct: 552321 cgacctcctcgacctcggg 552339
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>gb|AE005806.1| Caulobacter crescentus CB15 section 132 of 359 of the complete genome
          Length = 10111

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 19   ccctggccggcgaagccgc 37
            |||||||||||||||||||
Sbjct: 2459 ccctggccggcgaagccgc 2477
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>gb|AE012225.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 133
            of 460 of the complete genome
          Length = 10544

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 90   ccagcgcctggccgaccgc 108
            |||||||||||||||||||
Sbjct: 3984 ccagcgcctggccgaccgc 3966
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 26     cggcgaagccgctcatcggcgac 48
              |||| ||||||||||||||||||
Sbjct: 987325 cggcaaagccgctcatcggcgac 987303
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 73      cagcagcaccgcgcgttccagcgcctg 99
               |||||||||| |||| |||||||||||
Sbjct: 3931356 cagcagcacctcgcggtccagcgcctg 3931382
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>gb|AC156017.2| Mus musculus BAC clone RP24-239B9 from chromosome 16, complete sequence
          Length = 166416

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     tcttccccctggcccctgg 24
             |||||||||||||||||||
Sbjct: 34371 tcttccccctggcccctgg 34389
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>gb|AY249529.1| Rhodococcus ruber aldh6-adh6 operon, complete sequence
          Length = 2791

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 39  catcggcgacctcctcgac 57
           |||||||||||||||||||
Sbjct: 300 catcggcgacctcctcgac 318
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>gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence
          Length = 191204

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 8      ttccccctggcccctggcc 26
              |||||||||||||||||||
Sbjct: 113327 ttccccctggcccctggcc 113309
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 90      ccagcgcctggccgaccgc 108
               |||||||||||||||||||
Sbjct: 3570044 ccagcgcctggccgaccgc 3570062
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 45    cgacctcctcgacctcggg 63
             |||||||||||||||||||
Sbjct: 76719 cgacctcctcgacctcggg 76737
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                           
Query: 34       ccgctcatcggcgacctcctcgacctc 60
                |||||||||||| |||| |||||||||
Sbjct: 21339924 ccgctcatcggcaacctgctcgacctc 21339898
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     cctcctcgacctcggggag 66
              |||||||||||||||||||
Sbjct: 233446 cctcctcgacctcggggag 233464
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>gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinostaticus
            neocarzinostatin biosynthetic locus, complete sequence
          Length = 92294

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 88   ttccagcgcctggccgacc 106
            |||||||||||||||||||
Sbjct: 4843 ttccagcgcctggccgacc 4861
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>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete
             sequence
          Length = 132987

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 39    catcggcgacctcctcgacctcg 61
             |||||||||||||| ||||||||
Sbjct: 46804 catcggcgacctccgcgacctcg 46826
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>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0496H05
          Length = 147817

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 34    ccgctcatcggcgacctcctcgacctc 60
             |||||||||||| |||| |||||||||
Sbjct: 61862 ccgctcatcggcaacctgctcgacctc 61836
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>gb|AF463724.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence
          Length = 2779

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 8    ttccccctggcccctggcc 26
            |||||||||||||||||||
Sbjct: 1688 ttccccctggcccctggcc 1670
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 84      cgcgttccagcgcctggcc 102
               |||||||||||||||||||
Sbjct: 3027402 cgcgttccagcgcctggcc 3027384
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>dbj|AK110177.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-G12, full
           insert sequence
          Length = 3556

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 43  ggcgacctcctcgacctcg 61
           |||||||||||||||||||
Sbjct: 444 ggcgacctcctcgacctcg 426
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>dbj|AK109872.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B02, full
           insert sequence
          Length = 1797

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 39  catcggcgacctcctcgacctcg 61
           |||||||||||||| ||||||||
Sbjct: 775 catcggcgacctccgcgacctcg 753
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>dbj|AK106733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H12, full
            insert sequence
          Length = 1917

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 39   catcggcgacctcctcgacctcg 61
            |||||||||||||| ||||||||
Sbjct: 1031 catcggcgacctccgcgacctcg 1053
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>dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F12, full
           insert sequence
          Length = 1939

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 34  ccgctcatcggcgacctcctcgacctc 60
           |||||||||||| |||| |||||||||
Sbjct: 254 ccgctcatcggcaacctgctcgacctc 280
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>emb|CT009576.9| Mouse DNA sequence from clone RP23-36H10 on chromosome 16, complete
              sequence
          Length = 256007

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      tcttccccctggcccctgg 24
              |||||||||||||||||||
Sbjct: 134824 tcttccccctggcccctgg 134842


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 828,493
Number of Sequences: 3902068
Number of extensions: 828493
Number of successful extensions: 72425
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69048
Number of HSP's gapped (non-prelim): 3377
length of query: 126
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 105
effective length of database: 17,151,101,840
effective search space: 1800865693200
effective search space used: 1800865693200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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