Clone Name | bart51a07 |
---|---|
Clone Library Name | barley_pub |
>gb|DQ436925.1| Setaria viridis ramosa 3 (RA3) mRNA, partial cds Length = 1020 Score = 52.0 bits (26), Expect = 0.001 Identities = 77/94 (81%) Strand = Plus / Plus Query: 69 atgacgaaccacgccgcctttgctgccgaggacgcggtcaccgccgtggcggcgccggcg 128 |||||||| ||||||| || || |||| || |||||||||||||| |||||||||||| Sbjct: 1 atgacgaagcacgccggctacgccaccgacgaggcggtcaccgccgtcgcggcgccggcg 60 Query: 129 cagccgggtcgccatttcgcgtcgttcccgccgc 162 | | |||| | |||||| | |||||||||||| Sbjct: 61 ccggcgggcctgcatttctcaccgttcccgccgc 94 Score = 42.1 bits (21), Expect = 0.94 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ccatgaaggcctcctcgccccgccacgcc 278 ||||||||||||||||||| |||| |||| Sbjct: 188 ccatgaaggcctcctcgccacgccgcgcc 216
>gb|DQ436920.1| Zea mays ramosa 3 (RA3) mRNA, complete cds Length = 1086 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 95 cgaggacgcggtcaccgccgtggcggcgccggcgcagccgggtcgccatttcgcgtcgtt 154 |||||||| |||| | ||||||||||||||||||| | | || || |||||| ||||||| Sbjct: 27 cgaggacgtggtcgcggccgtggcggcgccggcgccggccggccggcatttcacgtcgtt 86 Query: 155 cc 156 || Sbjct: 87 cc 88
>gb|DQ436922.1| Avena strigosa sister of ramosa 3 (SRA) mRNA, partial cds Length = 753 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 240 ctgctggagaccatgaaggcctcctcgccccgccacg 276 |||||||| ||||||||||||| ||||||||||||| Sbjct: 1 ctgctggactccatgaaggcctcgtcgccccgccacg 37
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 111 gccgtggcggcgccggcgcagccgg 135 ||||||||||||||||||||||||| Sbjct: 3592652 gccgtggcggcgccggcgcagccgg 3592676
>ref|XM_479204.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1517 Score = 48.1 bits (24), Expect = 0.015 Identities = 39/44 (88%) Strand = Plus / Plus Query: 69 atgacgaaccacgccgcctttgctgccgaggacgcggtcaccgc 112 |||||||||||||||| ||| || || || |||||||||||||| Sbjct: 139 atgacgaaccacgccggcttcgccgcggacgacgcggtcaccgc 182
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.015 Identities = 39/44 (88%) Strand = Plus / Plus Query: 69 atgacgaaccacgccgcctttgctgccgaggacgcggtcaccgc 112 |||||||||||||||| ||| || || || |||||||||||||| Sbjct: 25813770 atgacgaaccacgccggcttcgccgcggacgacgcggtcaccgc 25813813 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcgcagccg 134 ||||||||||||||||||||| |||| Sbjct: 26870243 ccgccgtggcggcgccggcgcggccg 26870268 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 cgtggcggcgccggcgcagcc 133 ||||||||||||||||||||| Sbjct: 8869571 cgtggcggcgccggcgcagcc 8869551 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcgcagc 132 |||||||||||||| ||||||||| Sbjct: 1302706 ccgccgtggcggcgtcggcgcagc 1302729
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 48.1 bits (24), Expect = 0.015 Identities = 39/44 (88%) Strand = Plus / Plus Query: 69 atgacgaaccacgccgcctttgctgccgaggacgcggtcaccgc 112 |||||||||||||||| ||| || || || |||||||||||||| Sbjct: 130932 atgacgaaccacgccggcttcgccgcggacgacgcggtcaccgc 130975
>dbj|AK109902.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-F10, full insert sequence Length = 1517 Score = 48.1 bits (24), Expect = 0.015 Identities = 39/44 (88%) Strand = Plus / Plus Query: 69 atgacgaaccacgccgcctttgctgccgaggacgcggtcaccgc 112 |||||||||||||||| ||| || || || |||||||||||||| Sbjct: 139 atgacgaaccacgccggcttcgccgcggacgacgcggtcaccgc 182
>ref|XM_469243.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1014 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcgcagccg 134 ||||||||||||||||||||| |||| Sbjct: 113 ccgccgtggcggcgccggcgccgccg 138
>ref|NM_185891.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1332 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 109 ccgccgtggcggcgccggcgcagccg 134 ||||||||||||||||||||| |||| Sbjct: 68 ccgccgtggcggcgccggcgcggccg 43
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 109 ccgccgtggcggcgccggcgcagccg 134 ||||||||||||||||||||| |||| Sbjct: 26318778 ccgccgtggcggcgccggcgccgccg 26318753 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cggtcaccgccgtggcggcg 122 |||||||||||||||||||| Sbjct: 34592125 cggtcaccgccgtggcggcg 34592144 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgccgtggcggcgccggcgc 129 |||||||||||||||||||| Sbjct: 7648579 cgccgtggcggcgccggcgc 7648560
>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete sequence Length = 134728 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcgcagccg 134 ||||||||||||||||||||| |||| Sbjct: 71862 ccgccgtggcggcgccggcgccgccg 71887
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 gacgcggtcaccgccgtggcgg 120 |||||||||||||||||||||| Sbjct: 2730305 gacgcggtcaccgccgtggcgg 2730326
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 109 ccgccgtggcggcgccggcgcagccg 134 ||||||||||||||||||||| |||| Sbjct: 26410087 ccgccgtggcggcgccggcgccgccg 26410062 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cggtcaccgccgtggcggcg 122 |||||||||||||||||||| Sbjct: 34682197 cggtcaccgccgtggcggcg 34682216 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgccgtggcggcgccggcgc 129 |||||||||||||||||||| Sbjct: 7646414 cgccgtggcggcgccggcgc 7646395
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcgcagccg 134 ||||||||||||||||||||| |||| Sbjct: 18834 ccgccgtggcggcgccggcgcggccg 18859
>gb|AC005783.1|AC005783 Homo sapiens chromosome 19, cosmid R33083, complete sequence Length = 43501 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 218 gggggtgctgatggcagggtctctgc 243 ||||||||||||||||||| |||||| Sbjct: 4912 gggggtgctgatggcagggactctgc 4887
>ref|NM_186893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 210 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 cgtggcggcgccggcgcagcc 133 ||||||||||||||||||||| Sbjct: 24 cgtggcggcgccggcgcagcc 4
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcgc 129 ||||||||||||||||||||| Sbjct: 199338 ccgccgtggcggcgccggcgc 199358
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gtggcggcgccggcgcagccg 134 ||||||||||||||||||||| Sbjct: 875403 gtggcggcgccggcgcagccg 875383
>emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome Length = 101016 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ggcggcgccggcgcagccggg 136 ||||||||||||||||||||| Sbjct: 99380 ggcggcgccggcgcagccggg 99360
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 cgtggcggcgccggcgcagcc 133 ||||||||||||||||||||| Sbjct: 26683455 cgtggcggcgccggcgcagcc 26683475
>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047G05 Length = 145431 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 cgtggcggcgccggcgcagcc 133 ||||||||||||||||||||| Sbjct: 40918 cgtggcggcgccggcgcagcc 40938
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0677B10 Length = 134423 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 cgtggcggcgccggcgcagcc 133 ||||||||||||||||||||| Sbjct: 99885 cgtggcggcgccggcgcagcc 99905
>dbj|AP005051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458G06 Length = 139109 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 cgtggcggcgccggcgcagcc 133 ||||||||||||||||||||| Sbjct: 99671 cgtggcggcgccggcgcagcc 99651
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 42.1 bits (21), Expect = 0.94 Identities = 27/29 (93%) Strand = Plus / Plus Query: 99 gacgcggtcaccgccgtggcggcgccggc 127 |||||||| ||||||| |||||||||||| Sbjct: 106337 gacgcggtgaccgccgcggcggcgccggc 106365
>gb|AC102343.8| Mus musculus chromosome 3, clone RP23-254H18, complete sequence Length = 220876 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggtctctgctggagaccatg 254 |||||||||||||||||||| Sbjct: 101724 ggtctctgctggagaccatg 101743
>ref|NM_189671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 795 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgccgtggcggcgccggcg 128 |||||||||||||||||||| Sbjct: 724 ccgccgtggcggcgccggcg 705
>ref|NM_185089.1| Oryza sativa (japonica cultivar-group), mRNA Length = 546 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cggtcaccgccgtggcggcg 122 |||||||||||||||||||| Sbjct: 85 cggtcaccgccgtggcggcg 66
>ref|XM_476454.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcgcagc 132 |||||||||||||| ||||||||| Sbjct: 1763 ccgccgtggcggcgtcggcgcagc 1786
>gb|AC146187.2| Pan troglodytes BAC clone RP43-25A10 from 7, complete sequence Length = 156796 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gctgatggcagggtctctgc 243 |||||||||||||||||||| Sbjct: 134058 gctgatggcagggtctctgc 134077
>gb|AY356153.1| Canis familiaris isolate cOR2Z4 olfactory receptor family 2 subfamily Z-like gene, partial sequence Length = 603 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tccacctcgggggtgctgat 229 |||||||||||||||||||| Sbjct: 262 tccacctcgggggtgctgat 281
>gb|AC163023.4| Mus musculus chromosome 3, clone RP24-247E19, complete sequence Length = 166206 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggtctctgctggagaccatg 254 |||||||||||||||||||| Sbjct: 146655 ggtctctgctggagaccatg 146674
>gb|BC065983.1| Danio rerio vang-like 2 (van gogh, Drosophila), mRNA (cDNA clone MGC:76845 IMAGE:6971308), complete cds Length = 2068 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 1576 ccgccgcggagggcgcgcga 1557
>gb|AC004691.1| Homo sapiens PAC clone RP4-740D2 from 7, complete sequence Length = 141990 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gctgatggcagggtctctgc 243 |||||||||||||||||||| Sbjct: 70770 gctgatggcagggtctctgc 70751
>gb|AY448635.1| Eulemur mongoz clone OLG_11 olfactory receptor-like protein gene, partial sequence Length = 667 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tccacctcgggggtgctgat 229 |||||||||||||||||||| Sbjct: 410 tccacctcgggggtgctgat 429
>gb|AY448172.1| Cebus apella clone OLG_65 olfactory receptor-like protein gene, partial sequence Length = 667 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tccacctcgggggtgctgat 229 |||||||||||||||||||| Sbjct: 410 tccacctcgggggtgctgat 429
>ref|XM_542132.2| PREDICTED: Canis familiaris cOR2Z4 olfactory receptor family 2 subfamily Z-like (cOR2Z4), mRNA Length = 942 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tccacctcgggggtgctgat 229 |||||||||||||||||||| Sbjct: 598 tccacctcgggggtgctgat 617
>gb|AY459339.1| Oryza sativa (japonica cultivar-group) clone CL005170.5 R2R3-MYB gene region Length = 9432 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcg 128 |||||||||||||||||||| Sbjct: 1340 ccgccgtggcggcgccggcg 1359
>gb|AC127322.4| Mus musculus BAC clone RP23-238A8 from chromosome 6, complete sequence Length = 179698 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tctgctggagaccatgaagg 258 |||||||||||||||||||| Sbjct: 100283 tctgctggagaccatgaagg 100302
>emb|BX296557.35| Zebrafish DNA sequence from clone CH211-284O1 in linkage group 7, complete sequence Length = 173360 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 166431 ccgccgcggagggcgcgcga 166450
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ctgctggagaccatgaaggc 259 |||||||||||||||||||| Sbjct: 26400 ctgctggagaccatgaaggc 26419
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cggtcaccgccgtggcggcg 122 |||||||||||||||||||| Sbjct: 49842 cggtcaccgccgtggcggcg 49861
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 tcaccgccgtggcggcgccggcgc 129 ||||| |||||||||||||||||| Sbjct: 89586 tcaccaccgtggcggcgccggcgc 89609
>gb|AC161059.4| Mus musculus BAC clone RP23-82L9 from chromosome 6, complete sequence Length = 294389 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tctgctggagaccatgaagg 258 |||||||||||||||||||| Sbjct: 263602 tctgctggagaccatgaagg 263621
>gb|AC010335.8| Homo sapiens chromosome 19 clone CTD-3137H5, complete sequence Length = 137831 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ggaaggccgccctggggcgc 200 |||||||||||||||||||| Sbjct: 48788 ggaaggccgccctggggcgc 48769
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cgccgtggcggcgccggcgc 129 |||||||||||||||||||| Sbjct: 66711 cgccgtggcggcgccggcgc 66730
>emb|BX537263.17| Zebrafish DNA sequence from clone DKEY-208G1 in linkage group 14, complete sequence Length = 166940 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 10311 ccgccgcggagggcgcgcga 10292
>gb|AY449632.1| Prochilodus marggravii 18S ribosomal RNA gene, partial sequence Length = 638 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 272 ccgccgcggagggcgcgcga 253
>gb|AF474135.1| Oryza sativa typical P-type R2R3 Myb protein gene, complete cds Length = 1507 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcg 128 |||||||||||||||||||| Sbjct: 108 ccgccgtggcggcgccggcg 127
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ctgctggagaccatgaaggc 259 |||||||||||||||||||| Sbjct: 24382589 ctgctggagaccatgaaggc 24382570
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 107 caccgccgtggcggcgccggcgcagccg 134 |||||||| |||||||||||||| |||| Sbjct: 22712564 caccgccgcggcggcgccggcgccgccg 22712537
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcg 128 |||||||||||||||||||| Sbjct: 4917194 ccgccgtggcggcgccggcg 4917213
>gb|AF133089.2| Cyprinus carpio intergenic spacer region, partial sequence; 5' external transcribed spacer, 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 10072 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 5349 ccgccgcggagggcgcgcga 5330
>dbj|AB051738.1| Uncultured microorganism PCRLD12 gene for phenol hydroxylase large subunit, partial cds Length = 630 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cgaggacgcggtcaccgccg 114 |||||||||||||||||||| Sbjct: 384 cgaggacgcggtcaccgccg 403
>gb|AC008397.7|AC008397 Homo sapiens chromosome 19 clone CTC-251H24, complete sequence Length = 209519 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ggaaggccgccctggggcgc 200 |||||||||||||||||||| Sbjct: 203367 ggaaggccgccctggggcgc 203348
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgaggacgcggtcaccgc 112 |||||||||||||||||||| Sbjct: 541497 gccgaggacgcggtcaccgc 541478
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cggtcaccgccgtggcggcg 122 |||||||||||||||||||| Sbjct: 51208 cggtcaccgccgtggcggcg 51189
>gb|AC092408.3| Papio anubis clone RP41-446H8, complete sequence Length = 184036 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gctgatggcagggtctctgc 243 |||||||||||||||||||| Sbjct: 95123 gctgatggcagggtctctgc 95104
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcg 128 |||||||||||||||||||| Sbjct: 17647 ccgccgtggcggcgccggcg 17666
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcg 128 |||||||||||||||||||| Sbjct: 161843 ccgccgtggcggcgccggcg 161862
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcgcagc 132 |||||||||||||| ||||||||| Sbjct: 67541 ccgccgtggcggcgtcggcgcagc 67564
>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046O12 Length = 128223 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 107 caccgccgtggcggcgccggcgcagccg 134 |||||||| |||||||||||||| |||| Sbjct: 71360 caccgccgcggcggcgccggcgccgccg 71333
>dbj|AK109894.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-E11, full insert sequence Length = 699 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cggtcaccgccgtggcggcg 122 |||||||||||||||||||| Sbjct: 115 cggtcaccgccgtggcggcg 96
>dbj|AK109848.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F05, full insert sequence Length = 1440 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgccgtggcggcgccggcgcagc 132 |||||||||||||| ||||||||| Sbjct: 841 ccgccgtggcggcgtcggcgcagc 864
>dbj|AK109125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-D04, full insert sequence Length = 1089 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgccgtggcggcgccggcg 128 |||||||||||||||||||| Sbjct: 855 ccgccgtggcggcgccggcg 836
>emb|AJ334841.1|HSA334841 Homo sapiens genomic sequence surrounding NotI site, clone NB1-152R Length = 435 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ggaaggccgccctggggcgc 200 |||||||||||||||||||| Sbjct: 123 ggaaggccgccctggggcgc 104
>dbj|AK066774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088N06, full insert sequence Length = 978 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 107 caccgccgtggcggcgccggcgcagccg 134 |||||||| |||||||||||||| |||| Sbjct: 377 caccgccgcggcggcgccggcgccgccg 350
>gb|AF021880.1|AF021880 Ictalurus punctatus 18S small subunit ribosomal RNA gene, complete sequence Length = 1872 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 333 ccgccgcggagggcgcgcga 314
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tctgccgccgcttcttcggt 38 |||||||||||||||||||| Sbjct: 1558961 tctgccgccgcttcttcggt 1558980
>dbj|AK059409.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C05, full insert sequence Length = 1026 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cgccgtggcggcgccggcgc 129 |||||||||||||||||||| Sbjct: 150 cgccgtggcggcgccggcgc 169
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ggcggcgccggcgcagccgg 135 |||||||||||||||||||| Sbjct: 1043794 ggcggcgccggcgcagccgg 1043775
>gb|U48451.1|HUMRYR03 Human skeletal muscle ryanodine receptor gene (RYR1), exon 3 Length = 954 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cgcatggacctctccacctc 217 |||||||||||||||||||| Sbjct: 909 cgcatggacctctccacctc 928
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ctgctggagaccatgaaggc 259 |||||||||||||||||||| Sbjct: 24694258 ctgctggagaccatgaaggc 24694239
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gcggtcaccgccgtggcggcgccg 125 ||||| |||||||||||||||||| Sbjct: 1677788 gcggtgaccgccgtggcggcgccg 1677811
>gb|AY840979.1| Bifidobacterium breve prophage-like element, complete sequence Length = 28155 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cccgccgcggagggcgcgcg 174 |||||||||||||||||||| Sbjct: 8322 cccgccgcggagggcgcgcg 8303
>emb|AJ876391.1| Channallabes longicaudatus 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3008 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876390.1| Clariallabes longicauda 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, Mefange isolate Length = 3064 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876389.1| Clariallabes longicauda 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, Mokokou isolate Length = 3062 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876388.1| Channallabes alvarezi 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3026 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876387.1| Channallabes sanghaensis 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 2993 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876386.1| Clarias jaensis 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3040 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876385.1| Dinotopterus cunningtoni 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3124 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876384.1| Clarias ngamensis 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3160 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876383.1| Clarias gariepinus 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3171 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876382.1| Heterobranchus isopterus 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3128 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876381.1| Clarias stappersii 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3010 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876380.1| Tanganikallabes mortiauxi 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3006 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876379.1| Clarias pachynema 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3098 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876378.1| Clarias buthupogon 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3085 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876377.1| Heteropneustes fossilis 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 2806 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876376.1| Pangasianodon hypophthalmus 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 2790 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 326 ccgccgcggagggcgcgcga 307
>emb|AJ876375.1| Kryptopterus bicirrhis 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 2865 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccgccgcggagggcgcgcga 175 |||||||||||||||||||| Sbjct: 338 ccgccgcggagggcgcgcga 319
>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster Length = 78210 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgaggacgcggtcaccgc 112 |||||||||||||||||||| Sbjct: 23361 gccgaggacgcggtcaccgc 23380 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,832,044 Number of Sequences: 3902068 Number of extensions: 1832044 Number of successful extensions: 45489 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44315 Number of HSP's gapped (non-prelim): 1174 length of query: 284 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 262 effective length of database: 17,147,199,772 effective search space: 4492566340264 effective search space used: 4492566340264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)