>ROM1_YEAST (P53046) RHO1 GDP-GTP exchange protein 1 (Protein kinase C|
           suppressor SKC1)
          Length = 1155

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
 Frame = -3

Query: 399 KSSGISLA-PVRAPTYPTPLKSFHKVGLESS--------STGSSFPADSAKPVPLAVVSL 247
           K+SG  +  P +  T PTP  + H + L SS        ST S F  +S K       + 
Sbjct: 163 KNSGSHMGDPNQLSTPPTPKSAGHTMELHSSFNGKHSSSSTSSLFALESLKTQNRRSSNS 222

Query: 246 DSRQGQWESR*SIHARH*LDDE----AFGYLKRVIVTPAVYPRLVEFLHFDIQST 94
            +   Q+    + H RH    +    +   +  +  TP VYP L+  +    + T
Sbjct: 223 SNHSSQYRRHTNQHQRHHSRSKSSPVSLTEISMIKGTPLVYPALLSLIAIKFKQT 277

>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low|
           density lipoprotein receptor defect B-complementing
           protein)
          Length = 980

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 232 SLSTIQRNHSQGNGLGGISGERRPC 306
           +L T+ R H  G G+G + GE + C
Sbjct: 293 TLETVTRQHPTGKGIGALQGEMKLC 317

>CORIN_HUMAN (Q9Y5Q5) Atrial natriuteric peptide-converting enzyme (EC 3.4.21.-)|
           (pro-ANP-converting enzyme) (Corin) (Heart-specific
           serine proteinase ATC2) (Transmembrane protease, serine
           10)
          Length = 1042

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 6   WYGQGESDCLIKTKHCDGPRGC*RNVISAQCSECQSEEIQ 125
           W       CL  T  CDG   C   +    CS CQ +E++
Sbjct: 622 WECPSNKQCLKHTVICDGFPDCPDYMDEKNCSFCQDDELE 661

>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = -3

Query: 423 PRNK*NNVKSSGISLAPVRAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLD 244
           P ++ +  KSS ISL  V AP  P+           S  T  S P  +  P P   + LD
Sbjct: 201 PAHRSHQRKSSNISLPSVSAPPLPS----------ASLPTHVSNPPQAPPPPPTPTIGLD 250

Query: 243 SR 238
           S+
Sbjct: 251 SK 252

>ATT_APLFA (Q7M459) Attractin|
          Length = 58

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +3

Query: 12  GQGESDCLIKTKHCDGPRGC*RNVISAQC-----SECQSEEIQPSAG 137
           G   S C ++ ++CD   GC  N I  +C       CQ++E + ++G
Sbjct: 7   GNITSQCEMQHQNCDDANGC--NTIIEECKTSMVERCQNQEFESASG 51

>SYD_THEAC (Q9HJM1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 428

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 342 KSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR 217
           KS  K G+E S T  S   ++  P+PL VV  D  Q   E+R
Sbjct: 77  KSISKAGIEISGTSISIVNEAEAPLPLPVV--DPVQADLETR 116


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,503,794
Number of Sequences: 219361
Number of extensions: 1106507
Number of successful extensions: 2644
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2643
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)