ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart51a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189334.1| Oryza sativa (japonica cultivar-group), predic... 111 3e-22
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-22
3dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-22
4dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-22
5dbj|AK107370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 3e-22
6gb|DQ490482.1| Emericella nidulans endo-arabinanase (AN3044-2) m... 44 0.061
7ref|XM_655556.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.061
8dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.061
9gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 0.24
10dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 0.24
11gb|AE012254.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 0.24
12gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 0.24
13ref|XM_504854.1| Yarrowia lipolytica CLIB122, YALI0F01210g predi... 40 0.95
14emb|X81478.1|XOPHOX X.oryzae phoX gene 40 0.95
15gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswel... 40 0.95
16gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswel... 40 0.95
17gb|AF450501.1| Azotobacter vinelandii NifL (nifL) gene, partial ... 40 0.95
18gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78... 40 0.95
19gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 0.95
20emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 0.95
21gb|AY847776.1| Oryctolagus cuniculus protein kinase C delta (PRK... 38 3.7
22ref|XM_516525.1| PREDICTED: Pan troglodytes similar to protein k... 38 3.7
23gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 3.7
24gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 38 3.7
25ref|NM_006254.3| Homo sapiens protein kinase C, delta (PRKCD), t... 38 3.7
26ref|NM_212539.1| Homo sapiens protein kinase C, delta (PRKCD), t... 38 3.7
27ref|XM_322756.1| Neurospora crassa OR74A predicted protein (NCU0... 38 3.7
28gb|BC043350.1| Homo sapiens protein kinase C, delta, transcript ... 38 3.7
29ref|XM_950743.1| Neurospora crassa OR74A hypothetical protein (N... 38 3.7
30ref|XM_954003.1| Neurospora crassa OR74A hypothetical protein (N... 38 3.7
31gb|AF402803.1| Oryza sativa (japonica cultivar-group) clone E309... 38 3.7
32ref|XM_331577.1| Neurospora crassa OR74A hypothetical protein (N... 38 3.7
33gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome... 38 3.7
34gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosom... 38 3.7
35gb|AC125133.2| Mus musculus BAC clone RP24-316A22 from chromosom... 38 3.7
36emb|Z22521.1|HSPRKNCDA H.sapiens protein kinase C delta cDNA, 5'end 38 3.7
37emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 38 3.7
38emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II B... 38 3.7
39gb|AC010058.7| Drosophila melanogaster 3L BAC RP98-26L14 (Roswel... 38 3.7
40dbj|AK131548.1| Homo sapiens cDNA FLJ16784 fis, clone CTONG20037... 38 3.7
41gb|AY335687.1| Synthetic construct Homo sapiens protein kinase C... 38 3.7
42dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 3.7
43gb|AE003547.3| Drosophila melanogaster chromosome 3L, section 38... 38 3.7
44gb|U10879.1|SCU10879 Streptomyces coelicolor UDP-N-acetylmuramoy... 38 3.7
45gb|AC097015.2| Homo sapiens chromosome 3 clone RP11-82B23, compl... 38 3.7
46gb|L07860.1|HUMPCKD13X Human protein kinase C-delta 13 mRNA, com... 38 3.7
47gb|L07861.1|HUMPKCD13Y Human protein kinase C-delta 13 mRNA, com... 38 3.7 
>ref|NM_189334.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1410

 Score =  111 bits (56), Expect = 3e-22
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   acggatccgtggcgcgcgtcgccctgctgcgcctcaacccggccggcttcggcccctcct 60
           |||| ||||||||||||| ||| ||||||||||||||||||||  || ||||||||||||
Sbjct: 146 acggctccgtggcgcgcgccgcgctgctgcgcctcaacccggcgcgcctcggcccctcct 205

                                   
Query: 61  tcggcttcggcttcttctgcacca 84
           ||| ||||||||||||||||||||
Sbjct: 206 tcgccttcggcttcttctgcacca 229
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 3e-22
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                            
Query: 1        acggatccgtggcgcgcgtcgccctgctgcgcctcaacccggccggcttcggcccctcct 60
                |||| ||||||||||||| ||| ||||||||||||||||||||  || ||||||||||||
Sbjct: 42231369 acggctccgtggcgcgcgccgcgctgctgcgcctcaacccggcgcgcctcggcccctcct 42231428

                                        
Query: 61       tcggcttcggcttcttctgcacca 84
                ||| ||||||||||||||||||||
Sbjct: 42231429 tcgccttcggcttcttctgcacca 42231452
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>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0401G10
          Length = 160704

 Score =  111 bits (56), Expect = 3e-22
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    acggatccgtggcgcgcgtcgccctgctgcgcctcaacccggccggcttcggcccctcct 60
            |||| ||||||||||||| ||| ||||||||||||||||||||  || ||||||||||||
Sbjct: 3326 acggctccgtggcgcgcgccgcgctgctgcgcctcaacccggcgcgcctcggcccctcct 3385

                                    
Query: 61   tcggcttcggcttcttctgcacca 84
            ||| ||||||||||||||||||||
Sbjct: 3386 tcgccttcggcttcttctgcacca 3409
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>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1294_F06
          Length = 121088

 Score =  111 bits (56), Expect = 3e-22
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                          
Query: 1      acggatccgtggcgcgcgtcgccctgctgcgcctcaacccggccggcttcggcccctcct 60
              |||| ||||||||||||| ||| ||||||||||||||||||||  || ||||||||||||
Sbjct: 104567 acggctccgtggcgcgcgccgcgctgctgcgcctcaacccggcgcgcctcggcccctcct 104626

                                      
Query: 61     tcggcttcggcttcttctgcacca 84
              ||| ||||||||||||||||||||
Sbjct: 104627 tcgccttcggcttcttctgcacca 104650
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>dbj|AK107370.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B03, full
           insert sequence
          Length = 1610

 Score =  111 bits (56), Expect = 3e-22
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   acggatccgtggcgcgcgtcgccctgctgcgcctcaacccggccggcttcggcccctcct 60
           |||| ||||||||||||| ||| ||||||||||||||||||||  || ||||||||||||
Sbjct: 201 acggctccgtggcgcgcgccgcgctgctgcgcctcaacccggcgcgcctcggcccctcct 260

                                   
Query: 61  tcggcttcggcttcttctgcacca 84
           ||| ||||||||||||||||||||
Sbjct: 261 tcgccttcggcttcttctgcacca 284
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>gb|DQ490482.1| Emericella nidulans endo-arabinanase (AN3044-2) mRNA, complete cds
          Length = 1152

 Score = 44.1 bits (22), Expect = 0.061
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 53  cccctccttcggcttcggcttcttct 78
           |||||| |||||||||||||||||||
Sbjct: 684 cccctcgttcggcttcggcttcttct 659
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>ref|XM_655556.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3044.2), mRNA
          Length = 1161

 Score = 44.1 bits (22), Expect = 0.061
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 53  cccctccttcggcttcggcttcttct 78
           |||||| |||||||||||||||||||
Sbjct: 684 cccctcgttcggcttcggcttcttct 659
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.061
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 40      cggccggcttcggcccctccttcggc 65
               |||||||||||||| |||||||||||
Sbjct: 6393639 cggccggcttcggcgcctccttcggc 6393664
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 0.24
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 43     ccggcttcggcccctccttcggcttcggc 71
              |||||||||||| || |||||||||||||
Sbjct: 617524 ccggcttcggccgctgcttcggcttcggc 617552
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 0.24
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 65      cttcggcttcttctgcaccag 85
               |||||||||||||||||||||
Sbjct: 2594894 cttcggcttcttctgcaccag 2594874
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>gb|AE012254.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 162
            of 460 of the complete genome
          Length = 11586

 Score = 42.1 bits (21), Expect = 0.24
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   cttcggcttcttctgcaccag 85
            |||||||||||||||||||||
Sbjct: 1506 cttcggcttcttctgcaccag 1526
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 0.24
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 65      cttcggcttcttctgcaccag 85
               |||||||||||||||||||||
Sbjct: 3253409 cttcggcttcttctgcaccag 3253389
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>ref|XM_504854.1| Yarrowia lipolytica CLIB122, YALI0F01210g predicted mRNA
          Length = 855

 Score = 40.1 bits (20), Expect = 0.95
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  ctccttcggcttcggcttct 75
           ||||||||||||||||||||
Sbjct: 279 ctccttcggcttcggcttct 298
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>emb|X81478.1|XOPHOX X.oryzae phoX gene
          Length = 1330

 Score = 40.1 bits (20), Expect = 0.95
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   cttcggcttcttctgcacca 84
            ||||||||||||||||||||
Sbjct: 1085 cttcggcttcttctgcacca 1066
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>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 0.95
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ctccttcggcttcggcttct 75
             ||||||||||||||||||||
Sbjct: 61860 ctccttcggcttcggcttct 61841
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>gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 179613

 Score = 40.1 bits (20), Expect = 0.95
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ctccttcggcttcggcttct 75
             ||||||||||||||||||||
Sbjct: 15390 ctccttcggcttcggcttct 15371
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>gb|AF450501.1| Azotobacter vinelandii NifL (nifL) gene, partial cds; and rnf gene
            cluster, partial sequence
          Length = 4673

 Score = 40.1 bits (20), Expect = 0.95
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 10   tggcgcgcgtcgccctgctg 29
            ||||||||||||||||||||
Sbjct: 3536 tggcgcgcgtcgccctgctg 3555
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>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete
              sequence
          Length = 365612

 Score = 40.1 bits (20), Expect = 0.95
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     ctccttcggcttcggcttct 75
              ||||||||||||||||||||
Sbjct: 194752 ctccttcggcttcggcttct 194733
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 0.95
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      cttcggcttcttctgcacca 84
               ||||||||||||||||||||
Sbjct: 2615114 cttcggcttcttctgcacca 2615095
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 0.95
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     ctccttcggcttcggcttct 75
              ||||||||||||||||||||
Sbjct: 198445 ctccttcggcttcggcttct 198464
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>gb|AY847776.1| Oryctolagus cuniculus protein kinase C delta (PRKCD) mRNA,
          partial cds
          Length = 1423

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 67 tcggcttcttctgcaccag 85
          |||||||||||||||||||
Sbjct: 78 tcggcttcttctgcaccag 60
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>ref|XM_516525.1| PREDICTED: Pan troglodytes similar to protein kinase C, delta
           (LOC460442), mRNA
          Length = 1916

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 67  tcggcttcttctgcaccag 85
           |||||||||||||||||||
Sbjct: 279 tcggcttcttctgcaccag 261
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 59     cttcggcttcggcttcttc 77
              |||||||||||||||||||
Sbjct: 648582 cttcggcttcggcttcttc 648600
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>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
             complete sequence
          Length = 149870

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    ctgctgcgcctcaacccgg 42
             |||||||||||||||||||
Sbjct: 47584 ctgctgcgcctcaacccgg 47566
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>ref|NM_006254.3| Homo sapiens protein kinase C, delta (PRKCD), transcript variant 1,
           mRNA
          Length = 2850

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 67  tcggcttcttctgcaccag 85
           |||||||||||||||||||
Sbjct: 501 tcggcttcttctgcaccag 483
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>ref|NM_212539.1| Homo sapiens protein kinase C, delta (PRKCD), transcript variant 2,
           mRNA
          Length = 2738

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 67  tcggcttcttctgcaccag 85
           |||||||||||||||||||
Sbjct: 389 tcggcttcttctgcaccag 371
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>ref|XM_322756.1| Neurospora crassa OR74A predicted protein (NCU03499.1) partial
          mRNA
          Length = 387

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 59 cttcggcttcggcttcttc 77
          |||||||||||||||||||
Sbjct: 94 cttcggcttcggcttcttc 76
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>gb|BC043350.1| Homo sapiens protein kinase C, delta, transcript variant 1, mRNA
           (cDNA clone MGC:49908 IMAGE:5539909), complete cds
          Length = 2693

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 67  tcggcttcttctgcaccag 85
           |||||||||||||||||||
Sbjct: 520 tcggcttcttctgcaccag 502
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>ref|XM_950743.1| Neurospora crassa OR74A hypothetical protein (NCU03499.1) partial
          mRNA
          Length = 387

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 59 cttcggcttcggcttcttc 77
          |||||||||||||||||||
Sbjct: 94 cttcggcttcggcttcttc 76
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>ref|XM_954003.1| Neurospora crassa OR74A hypothetical protein (NCU09186.1) partial
            mRNA
          Length = 1749

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 49   tcggcccctccttcggcttcggc 71
            ||||| |||||||||||||||||
Sbjct: 1450 tcggcacctccttcggcttcggc 1428
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>gb|AF402803.1| Oryza sativa (japonica cultivar-group) clone E30945_1A putative
           glutathione S-transferase OsGSTU16 mRNA, partial cds
          Length = 331

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 24  ctgctgcgcctcaacccgg 42
           |||||||||||||||||||
Sbjct: 278 ctgctgcgcctcaacccgg 296
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>ref|XM_331577.1| Neurospora crassa OR74A hypothetical protein (NCU09186.1) partial
            mRNA
          Length = 1749

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 49   tcggcccctccttcggcttcggc 71
            ||||| |||||||||||||||||
Sbjct: 1450 tcggcacctccttcggcttcggc 1428
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>gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome 18, complete sequence
          Length = 206588

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    tccttcggcttcggcttct 75
             |||||||||||||||||||
Sbjct: 10424 tccttcggcttcggcttct 10442
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>gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosome 18, complete sequence
          Length = 169912

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     tccttcggcttcggcttct 75
              |||||||||||||||||||
Sbjct: 158655 tccttcggcttcggcttct 158673
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>gb|AC125133.2| Mus musculus BAC clone RP24-316A22 from chromosome 18, complete
             sequence
          Length = 175583

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    ttcggcttcttctgcacca 84
             |||||||||||||||||||
Sbjct: 88593 ttcggcttcttctgcacca 88575
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>emb|Z22521.1|HSPRKNCDA H.sapiens protein kinase C delta cDNA, 5'end
          Length = 1423

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 67  tcggcttcttctgcaccag 85
           |||||||||||||||||||
Sbjct: 477 tcggcttcttctgcaccag 459
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 41     ggccggcttcggcccctccttcggctt 67
              |||||||| |||| |||||||||||||
Sbjct: 132535 ggccggctccggctcctccttcggctt 132561
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>emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II BAC contig B23H20
          Length = 122151

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 59    cttcggcttcggcttcttc 77
             |||||||||||||||||||
Sbjct: 24878 cttcggcttcggcttcttc 24860
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>gb|AC010058.7| Drosophila melanogaster 3L BAC RP98-26L14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181950

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 56     ctccttcggcttcggcttcttct 78
              ||||||||||||| |||||||||
Sbjct: 123790 ctccttcggcttctgcttcttct 123812
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>dbj|AK131548.1| Homo sapiens cDNA FLJ16784 fis, clone CTONG2003764, highly  similar
            to Protein kinase C, delta type (EC 2.7.1.-)
          Length = 2800

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 67   tcggcttcttctgcaccag 85
            |||||||||||||||||||
Sbjct: 1492 tcggcttcttctgcaccag 1474
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>gb|AY335687.1| Synthetic construct Homo sapiens protein kinase C, delta (PRKCD)
           mRNA, partial cds
          Length = 2031

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 67  tcggcttcttctgcaccag 85
           |||||||||||||||||||
Sbjct: 148 tcggcttcttctgcaccag 130
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 24       ctgctgcgcctcaacccgg 42
                |||||||||||||||||||
Sbjct: 20049259 ctgctgcgcctcaacccgg 20049241
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>gb|AE003547.3| Drosophila melanogaster chromosome 3L, section 38 of 83 of the complete
              sequence
          Length = 281339

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 56     ctccttcggcttcggcttcttct 78
              ||||||||||||| |||||||||
Sbjct: 115795 ctccttcggcttctgcttcttct 115773
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>gb|U10879.1|SCU10879 Streptomyces coelicolor UDP-N-acetylmuramoylalanine--D-glutamate
            ligase (murD) gene, partial cds; FtsW (fstW),
            UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
            pyrophosphoryl-undecaprenol N-acetylglucosamine
            transferase (murG), FtsQ (ftsQ), and FtsZ (ftsZ) genes,
            complete cds; and unknown gene
          Length = 5700

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 41   ggccggcttcggcccctccttcggctt 67
            |||||||| |||| |||||||||||||
Sbjct: 5409 ggccggctccggctcctccttcggctt 5383
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>gb|AC097015.2| Homo sapiens chromosome 3 clone RP11-82B23, complete sequence
          Length = 178596

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    tcggcttcttctgcaccag 85
             |||||||||||||||||||
Sbjct: 38633 tcggcttcttctgcaccag 38615
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>gb|L07860.1|HUMPCKD13X Human protein kinase C-delta 13 mRNA, complete cds
          Length = 2104

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 67  tcggcttcttctgcaccag 85
           |||||||||||||||||||
Sbjct: 206 tcggcttcttctgcaccag 188
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>gb|L07861.1|HUMPKCD13Y Human protein kinase C-delta 13 mRNA, complete cds
          Length = 2104

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 67  tcggcttcttctgcaccag 85
           |||||||||||||||||||
Sbjct: 206 tcggcttcttctgcaccag 188


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 600,213
Number of Sequences: 3902068
Number of extensions: 600213
Number of successful extensions: 48859
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48084
Number of HSP's gapped (non-prelim): 775
length of query: 88
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 67
effective length of database: 17,151,101,840
effective search space: 1149123823280
effective search space used: 1149123823280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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