ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart50h08 |
|---|---|
| Clone Library Name | barley_pub |
>IF2A_SCHPO (P56286) Eukaryotic translation initiation factor 2 alpha subunit| (eIF-2-alpha) Length = 306 Score = 147 bits (371), Expect = 1e-35 Identities = 73/132 (55%), Positives = 87/132 (65%) Frame = +3 Query: 69 MPNLECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXX 248 M CRMYE RFPEVD V++ V+ I +MGAYV LLEY+NIEGM Sbjct: 1 MSTTSCRMYENRFPEVDELVVVNVRQIQEMGAYVKLLEYDNIEGMVLLSELSRRRIRSVQ 60 Query: 249 XXXKVGRQEPSMVLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLG 428 +VGR E +VLRVD++KGYIDLSKRRVS E+ CE+R+NKSK VHSIMRH A+ Sbjct: 61 KHIRVGRNEVVVVLRVDKEKGYIDLSKRRVSPEDVVKCEERFNKSKAVHSIMRHIAEKHN 120 Query: 429 VDLEPLYQRIGW 464 V LE +Y IGW Sbjct: 121 VPLETMYTTIGW 132
>IF2A_RAT (P68101) Eukaryotic translation initiation factor 2 subunit 1| (Eukaryotic translation initiation factor 2 alpha subunit) (eIF-2-alpha) (EIF-2alpha) (EIF-2A) Length = 314 Score = 141 bits (356), Expect = 7e-34 Identities = 71/135 (52%), Positives = 89/135 (65%), Gaps = 4/135 (2%) Frame = +3 Query: 72 PNLECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXX 251 P L CR Y+ +FPEV+ VM+ V+ IA+MGAYVSLLEYNNIEGM Sbjct: 1 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINK 60 Query: 252 XXKVGRQEPSMVLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTL-- 425 ++GR E +V+RVD++KGYIDLSKRRVS EEA CED++ KSK V+SI+RH A+ L Sbjct: 61 LIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEY 120 Query: 426 --GVDLEPLYQRIGW 464 LE L+QR W Sbjct: 121 TKDEQLESLFQRTAW 135
>IF2A_MOUSE (Q6ZWX6) Eukaryotic translation initiation factor 2 subunit 1| (Eukaryotic translation initiation factor 2 alpha subunit) (eIF-2-alpha) (EIF-2alpha) (EIF-2A) Length = 314 Score = 141 bits (356), Expect = 7e-34 Identities = 71/135 (52%), Positives = 89/135 (65%), Gaps = 4/135 (2%) Frame = +3 Query: 72 PNLECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXX 251 P L CR Y+ +FPEV+ VM+ V+ IA+MGAYVSLLEYNNIEGM Sbjct: 1 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINK 60 Query: 252 XXKVGRQEPSMVLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTL-- 425 ++GR E +V+RVD++KGYIDLSKRRVS EEA CED++ KSK V+SI+RH A+ L Sbjct: 61 LIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEY 120 Query: 426 --GVDLEPLYQRIGW 464 LE L+QR W Sbjct: 121 TKDEQLESLFQRTAW 135
>IF2A_HUMAN (P05198) Eukaryotic translation initiation factor 2 subunit 1| (Eukaryotic translation initiation factor 2 alpha subunit) (eIF-2-alpha) (EIF-2alpha) (EIF-2A) Length = 314 Score = 141 bits (356), Expect = 7e-34 Identities = 71/135 (52%), Positives = 89/135 (65%), Gaps = 4/135 (2%) Frame = +3 Query: 72 PNLECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXX 251 P L CR Y+ +FPEV+ VM+ V+ IA+MGAYVSLLEYNNIEGM Sbjct: 1 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINK 60 Query: 252 XXKVGRQEPSMVLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTL-- 425 ++GR E +V+RVD++KGYIDLSKRRVS EEA CED++ KSK V+SI+RH A+ L Sbjct: 61 LIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEY 120 Query: 426 --GVDLEPLYQRIGW 464 LE L+QR W Sbjct: 121 TKDEQLESLFQRTAW 135
>IF2A_BOVIN (P68102) Eukaryotic translation initiation factor 2 subunit 1| (Eukaryotic translation initiation factor 2 alpha subunit) (eIF-2-alpha) (EIF-2alpha) (EIF-2A) Length = 314 Score = 141 bits (356), Expect = 7e-34 Identities = 71/135 (52%), Positives = 89/135 (65%), Gaps = 4/135 (2%) Frame = +3 Query: 72 PNLECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXX 251 P L CR Y+ +FPEV+ VM+ V+ IA+MGAYVSLLEYNNIEGM Sbjct: 1 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINK 60 Query: 252 XXKVGRQEPSMVLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTL-- 425 ++GR E +V+RVD++KGYIDLSKRRVS EEA CED++ KSK V+SI+RH A+ L Sbjct: 61 LIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEY 120 Query: 426 --GVDLEPLYQRIGW 464 LE L+QR W Sbjct: 121 TKDEQLESLFQRTAW 135
>IF2A_YEAST (P20459) Eukaryotic translation initiation factor 2 alpha subunit| (eIF-2-alpha) Length = 304 Score = 137 bits (346), Expect = 1e-32 Identities = 65/132 (49%), Positives = 87/132 (65%) Frame = +3 Query: 69 MPNLECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXX 248 M CR YE ++PE+D VM+ V+ IA+MGAYV LLEY+NIEGM Sbjct: 1 MSTSHCRFYENKYPEIDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQ 60 Query: 249 XXXKVGRQEPSMVLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLG 428 +VG+ + ++VLRVD++KGYIDLSKRRVS E+ CE++Y KSK VHSI+R+ A+ Sbjct: 61 KLIRVGKNDVAVVLRVDKEKGYIDLSKRRVSSEDIIKCEEKYQKSKTVHSILRYCAEKFQ 120 Query: 429 VDLEPLYQRIGW 464 + LE LY+ I W Sbjct: 121 IPLEELYKTIAW 132
>IF2A_DROME (P41374) Eukaryotic translation initiation factor 2 alpha subunit| (eIF-2-alpha) Length = 341 Score = 129 bits (325), Expect = 3e-30 Identities = 64/133 (48%), Positives = 85/133 (63%), Gaps = 4/133 (3%) Frame = +3 Query: 78 LECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXX 257 L R Y R+PE++ VM+ V IA+MGAYV LLEYNNIEGM Sbjct: 3 LTSRFYNERYPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLI 62 Query: 258 KVGRQEPSMVLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVD- 434 +VG+ EP +V+RVD++KGYIDLSKRRVS E+ C +R+ K+K ++S++RH AD LG + Sbjct: 63 RVGKTEPVVVIRVDKEKGYIDLSKRRVSPEDVEKCTERFAKAKAINSLLRHVADILGFEG 122 Query: 435 ---LEPLYQRIGW 464 LE LYQ+ W Sbjct: 123 NEKLEDLYQKTAW 135
>IF2A_METJA (Q57581) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 266 Score = 70.5 bits (171), Expect = 2e-12 Identities = 40/120 (33%), Positives = 61/120 (50%) Frame = +3 Query: 105 FPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSM 284 FPE V+ VK + GA+V LLEY EGM KVG++ + Sbjct: 8 FPEEGDIVIGTVKDVKPYGAFVELLEYPGKEGMIHISEVTSGWVKNIRDHVKVGQRVVAK 67 Query: 285 VLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRIGW 464 VLRVD KG+IDLS +RV+E++ + + + ++ AA+ LG LE ++ +G+ Sbjct: 68 VLRVDERKGHIDLSLKRVTEQQKRAKVQEWKRFQRASKMLERAAEKLGKSLEEAWEEVGY 127
>IF2A_PIG (P20460) Eukaryotic translation initiation factor 2 subunit 1| (Eukaryotic translation initiation factor 2 alpha subunit) (eIF-2-alpha) (EIF-2alpha) (EIF-2A) (Fragment) Length = 69 Score = 68.6 bits (166), Expect = 8e-12 Identities = 32/66 (48%), Positives = 40/66 (60%) Frame = +3 Query: 72 PNLECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXX 251 P L CR Y+ +FPEV+ VM+ V+ IA+MGAYVSLLEYNNIEGM Sbjct: 1 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINK 60 Query: 252 XXKVGR 269 ++GR Sbjct: 61 LIRIGR 66
>IF2A_RABIT (P83268) Eukaryotic translation initiation factor 2 subunit 1| (Eukaryotic translation initiation factor 2 alpha subunit) (eIF-2-alpha) (EIF-2alpha) (EIF-2A) (Fragment) Length = 52 Score = 66.2 bits (160), Expect = 4e-11 Identities = 29/43 (67%), Positives = 35/43 (81%) Frame = +3 Query: 72 PNLECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEG 200 P L CR Y+ +FPEV+ VM+ V+ IA+MGAYVSLLEYNNIEG Sbjct: 1 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEG 43
>IF2A_PYRKO (Q5JE49) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 275 Score = 62.4 bits (150), Expect = 6e-10 Identities = 34/118 (28%), Positives = 62/118 (52%) Frame = +3 Query: 105 FPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSM 284 +PE V+ VK+I GA+++L EY EG K G++ + Sbjct: 8 YPEEGEFVVATVKNIHPYGAFLTLDEYPGKEGFMHISEVAPTWVKNIRDYLKEGQKIVAK 67 Query: 285 VLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRI 458 V+RVD +KG+IDLS +RV++++ Y +++ ++++ AA+ LG D E ++ + Sbjct: 68 VIRVDPEKGHIDLSLKRVNQQQRKAKLQEYKRAQKAENLLKMAAEKLGKDFETAWREV 125
>IF2A_PYRFU (Q8U1R5) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 275 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/118 (27%), Positives = 60/118 (50%) Frame = +3 Query: 105 FPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSM 284 +PE V+ VK + + GA++ L EY EG + G++ + Sbjct: 8 YPEEGELVVATVKRVHNYGAFLDLDEYPGKEGFMHISEVASTWVKNIRDYLREGQKVVAK 67 Query: 285 VLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRI 458 V+RVD KG+IDLS RRV++++ + +++ ++++ AA+ LG D E ++ + Sbjct: 68 VIRVDPKKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFEEAWREV 125
>IF2A_PYRHO (O58655) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 275 Score = 60.1 bits (144), Expect = 3e-09 Identities = 34/118 (28%), Positives = 59/118 (50%) Frame = +3 Query: 105 FPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSM 284 +PE V+ VK I + GA++ L EY E K G++ + Sbjct: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67 Query: 285 VLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRI 458 V+RVD KG+IDLS RRV++++ + +++ +++R AA+ LG D E ++ + Sbjct: 68 VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLRLAAEKLGKDFEAAWREV 125
>IF2A_PYRAB (Q9V0E4) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 275 Score = 58.9 bits (141), Expect = 6e-09 Identities = 33/118 (27%), Positives = 59/118 (50%) Frame = +3 Query: 105 FPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSM 284 +PE V+ VK I + GA++ L EY E K G++ + Sbjct: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67 Query: 285 VLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRI 458 V+RVD KG+IDLS RRV++++ + +++ ++++ AA+ LG D E ++ + Sbjct: 68 VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREV 125
>IF2A_METKA (Q8TY86) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 267 Score = 56.2 bits (134), Expect = 4e-08 Identities = 31/119 (26%), Positives = 57/119 (47%) Frame = +3 Query: 108 PEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSMV 287 PE VM V+ + D GA+V+L EY ++G K G++ + V Sbjct: 9 PEEGEIVMATVERVEDHGAFVTLDEYPGVDGYIHISEVASGWVKNIRDYVKEGQKVVAKV 68 Query: 288 LRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRIGW 464 +RV+ + Y +LS R+V++ + + + + ++ AA+ LG DL+ Y+ G+ Sbjct: 69 IRVNPKRKYANLSLRKVTDHQRKEKLKEWKREQRAEKLLEMAAEELGKDLDEAYEEAGY 127
>IF2A_SULTO (Q973G0) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 263 Score = 52.8 bits (125), Expect = 4e-07 Identities = 31/119 (26%), Positives = 56/119 (47%) Frame = +3 Query: 108 PEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSMV 287 P ++ VK I D G+YV+L EY N++ K GR+ V Sbjct: 9 PTEGEILIATVKQIFDYGSYVTLDEYGNLQAFLPWSEISSRWVKNIRDVIKEGRKIVVKV 68 Query: 288 LRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRIGW 464 +RVD+ KG ID+S ++V+E+E ++ K + V I+ + + + ++++ W Sbjct: 69 IRVDKRKGTIDVSLKKVTEDEKRKKMSQWKKIQKVDKILEIVSQKINKTEKEGWEQVAW 127
>IF2A_SULSO (Q97Z79) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 266 Score = 50.4 bits (119), Expect = 2e-06 Identities = 28/121 (23%), Positives = 56/121 (46%) Frame = +3 Query: 102 RFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPS 281 + P ++ VK + D G+YVSL EY ++ K R+ Sbjct: 7 KLPSEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSSKWVKNIRDVLKENRKVIV 66 Query: 282 MVLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRIG 461 V+RVDR KG +D+S ++V+++E ++ K + + I+ + L + + ++++ Sbjct: 67 KVIRVDRRKGTVDVSLKKVTDDERRKKNLQWKKIQRLDKILELVSQKLKLSEKDAWEQVA 126 Query: 462 W 464 W Sbjct: 127 W 127
>IF2A_METTH (O27363) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 262 Score = 46.6 bits (109), Expect = 3e-05 Identities = 28/120 (23%), Positives = 53/120 (44%) Frame = +3 Query: 105 FPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSM 284 +PE V+ V + + GA+ +L EY E + ++ + Sbjct: 11 WPEEGELVVGTVHKVLNYGAFATLEEYPGKEAFIHISEVSSGWVKNIRDFVRENQKIVAR 70 Query: 285 VLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRIGW 464 VLRV+ KG++D+S +R+ E++ + + + AA LG DL+ Y+ +G+ Sbjct: 71 VLRVNPRKGHVDVSMKRIREDQRTKKIQAWKIEQKAEKFLELAARDLGKDLDTAYEEVGY 130
>IF2A_AERPE (Q9YF02) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 277 Score = 46.6 bits (109), Expect = 3e-05 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 2/131 (1%) Frame = +3 Query: 78 LECRMYEPR--FPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXX 251 +E ++ +PR P+V V+ V+ + D GAY+ L EY + Sbjct: 7 VEVKLLKPRKPLPDVGEIVVGTVQEVHDYGAYLILDEYGGVRAFLPWSEIASRAVRNIHA 66 Query: 252 XXKVGRQEPSMVLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGV 431 K ++ V+RV + +G +D+S +RV + E Y + +++ A+ LG Sbjct: 67 VLKPRQKVVVKVIRVYKKRGQVDVSLKRVMDSEKKRKMMFYKRYLKAATLVELIAEKLGK 126 Query: 432 DLEPLYQRIGW 464 ++ Y+ + W Sbjct: 127 SVDEAYREVLW 137
>IF2A_ARCFU (O29723) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 267 Score = 45.4 bits (106), Expect = 7e-05 Identities = 32/119 (26%), Positives = 52/119 (43%) Frame = +3 Query: 105 FPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSM 284 +P V+ VK + D GA+VSL EY EGM K G++ Sbjct: 13 YPSKGEIVIGTVKRVLDFGAFVSLDEYEGREGMVHISEVASGWIKDIREHVKKGQKVICK 72 Query: 285 VLRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRIG 461 VL V+ +G+IDLS + V+E + ++ + + L +D + L ++IG Sbjct: 73 VLDVNPKRGHIDLSIKDVNERQRREKLQQWKNEMKAFKWLEIIGEKLNIDFKEL-EKIG 130
>IF2A_THEVO (Q97BP2) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 254 Score = 40.0 bits (92), Expect = 0.003 Identities = 24/118 (20%), Positives = 49/118 (41%) Frame = +3 Query: 108 PEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSMV 287 PEV V++++ + + GA L EY +EG + G++ V Sbjct: 7 PEVGDLVVVKITEVKNFGANGILEEYPGVEGYIHISEVATGWVKHIRSYLREGQRVVCKV 66 Query: 288 LRVDRDKGYIDLSKRRVSEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLYQRIG 461 + V++++ +DLS +RV++ ++ + + + L DLE + G Sbjct: 67 INVNQERKNVDLSLKRVNQHQSREKIAEWKNEQKADKLFEIVCSKLNKDLEACKKEFG 124
>ISPH_CLOAB (Q97I09) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 642 Score = 35.4 bits (80), Expect = 0.073 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%) Frame = +3 Query: 135 QVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSMVLRVDRDKGY 314 +VK + D GA+V E ++G+ K+G + VL VD++ Sbjct: 490 EVKRLTDFGAFV---EIEGVDGLLHVSEISWGRVEKPADVLKIGDKIKVYVLSVDKENKK 546 Query: 315 IDLSKRRVSEEEAATCEDRYNKSKLV-HSIMRHAADTLGVDLEP 443 + LS ++++E E++Y +V ++R A V LEP Sbjct: 547 LSLSVKKLTENPWNNVEEKYPVGSVVLGKVIRFADFGAFVKLEP 590
>IF2A_PYRAE (Q8ZTY5) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 265 Score = 35.0 bits (79), Expect = 0.095 Identities = 25/88 (28%), Positives = 40/88 (45%) Frame = +3 Query: 87 RMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVG 266 R+ + FP+V V+ VK IA+ GAYV L EY ++E K G Sbjct: 2 RLVKKEFPDVGELVIGTVKKIAEHGAYVYLDEY-DLEAFAPTQEIVQSWFHSIRDYVKEG 60 Query: 267 RQEPSMVLRVDRDKGYIDLSKRRVSEEE 350 + V+ V+ +++S +RV +E Sbjct: 61 NKTVFKVISVNPKMRVVEVSLKRVRVDE 88
>VK03_VACCV (P18378) Protein K3 (Protein K2)| Length = 88 Score = 32.3 bits (72), Expect = 0.62 Identities = 17/66 (25%), Positives = 28/66 (42%) Frame = +3 Query: 153 DMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSMVLRVDRDKGYIDLSKR 332 D Y+ L +Y + E + VG+ V+RVD KGYID++ + Sbjct: 23 DYALYIYLFDYPHFEAILAESVKMHMDRYVEYRDKLVGKTVKVKVIRVDYTKGYIDVNYK 82 Query: 333 RVSEEE 350 R+ + Sbjct: 83 RMCRHQ 88
>IF2A_HALMA (Q5UX22) Translation initiation factor 2 alpha subunit| (eIF-2-alpha) (aIF2-alpha) Length = 266 Score = 31.6 bits (70), Expect = 1.1 Identities = 21/82 (25%), Positives = 33/82 (40%) Frame = +3 Query: 105 FPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSM 284 +PE V+ ++ I D G +V L EY G+ G+ + Sbjct: 6 WPEPGELVVGKIDEIEDFGVFVDLDEYEGKRGLCHISEVASGWIKNVRDHVNEGQTVVAK 65 Query: 285 VLRVDRDKGYIDLSKRRVSEEE 350 VL VD IDLS + V++ + Sbjct: 66 VLDVDESAQQIDLSIKDVNDHQ 87
>VK03_VACCC (P20639) Protein K3| Length = 88 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/66 (25%), Positives = 28/66 (42%) Frame = +3 Query: 153 DMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSMVLRVDRDKGYIDLSKR 332 D Y+ L +Y + E + VG+ V+RVD KGYID++ + Sbjct: 23 DYALYIYLFDYPHSEAILAESVKMHMDRYVEYRDKLVGKTVKVKVIRVDYTKGYIDVNYK 82 Query: 333 RVSEEE 350 R+ + Sbjct: 83 RMCRHQ 88
>RS1_BUCBP (Q89AJ3) 30S ribosomal protein S1| Length = 566 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Frame = +3 Query: 138 VKHIADMGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXXXXKVGRQEPSMVLRVDRDKGYI 317 VK++ D GA+V L ++G+ +G + +L+ DR+K + Sbjct: 199 VKNLTDYGAFVDL---GGVDGLLHITDMAWKRVKHPSEIVNIGDEVKIKILKFDREKIRV 255 Query: 318 DLSKRRVSEEEAATCEDRY-NKSKL 389 L +++S++ +RY K+K+ Sbjct: 256 SLGLKQLSDDPWTKISERYPEKTKI 280
>TBB_ASPFU (Q4WA70) Tubulin beta chain (Beta tubulin)| Length = 448 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 339 SEEEAATCEDRYNKSKLVHSIMRHAADTLGVDLEPLY 449 S + + T + YN + VH ++ HA +T +D E LY Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVEHADETFCIDNEALY 208
>ACEK_ECOLI (P11071) Isocitrate dehydrogenase kinase/phosphatase (EC 2.7.11.5)| (EC 3.1.3.-) (IDH kinase/phosphatase) (IDHK/P) Length = 578 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +3 Query: 375 NKSKLVHSIMRHAADTLGVD 434 NKS+ +H I+RH +TLG D Sbjct: 168 NKSRDIHYIIRHLTETLGTD 187
>ACEK_ECOL6 (Q8FB61) Isocitrate dehydrogenase kinase/phosphatase (EC 2.7.11.5)| (EC 3.1.3.-) (IDH kinase/phosphatase) (IDHK/P) Length = 574 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +3 Query: 375 NKSKLVHSIMRHAADTLGVD 434 NKS+ +H I+RH +TLG D Sbjct: 168 NKSRDIHYIVRHLTETLGTD 187 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.307 0.131 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,308,375 Number of Sequences: 219361 Number of extensions: 387260 Number of successful extensions: 887 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 873 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 882 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (22.0 bits)
