ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RL7A_ORYSA (P35685) 60S ribosomal protein L7a 133 1e-31
2RL7A_ARATH (P49692) 60S ribosomal protein L7a 122 2e-28
3RL7A_FUGRU (O57592) 60S ribosomal protein L7a (Surfeit locus pro... 93 2e-19
4RL7A_RAT (P62425) 60S ribosomal protein L7a 91 7e-19
5RL7A_MOUSE (P12970) 60S ribosomal protein L7a (Surfeit locus pro... 91 7e-19
6RL7A_HUMAN (P62424) 60S ribosomal protein L7a (Surfeit locus pro... 91 7e-19
7RL7A_DROME (P46223) 60S ribosomal protein L7a 91 9e-19
8RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a 91 9e-19
9RL7A_CHICK (P32429) 60S ribosomal protein L7a 89 2e-18
10RL8_SCHPO (O13672) 60S ribosomal protein L8 (L7A) (L4) 89 2e-18
11RL7A_ANOGA (O76732) 60S ribosomal protein L7a 80 9e-16
12RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a 78 6e-15
13RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (Y... 77 8e-15
14RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (Y... 77 8e-15
15RL7A_PIG (Q29375) 60S ribosomal protein L7a (Fragment) 28 4.0
16KCNKA_HUMAN (P57789) Potassium channel subfamily K member 10 (Ou... 28 4.0
17MAGC2_HUMAN (Q9UBF1) Melanoma-associated antigen C2 (MAGE-C2 ant... 28 6.8

>RL7A_ORYSA (P35685) 60S ribosomal protein L7a|
          Length = 258

 Score =  133 bits (334), Expect = 1e-31
 Identities = 65/85 (76%), Positives = 66/85 (77%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFEKRPKQFGIGGALPPKKDLHRFVKWP                  PPAL+QFTRTLD
Sbjct: 22  NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           KNLATNLFKMLLKYRPEDK AKKER
Sbjct: 82  KNLATNLFKMLLKYRPEDKAAKKER 106



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>RL7A_ARATH (P49692) 60S ribosomal protein L7a|
          Length = 257

 Score =  122 bits (307), Expect = 2e-28
 Identities = 58/85 (68%), Positives = 65/85 (76%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFE+RPKQFGIGGALPPKKDL R++KWP                  PPAL+QFT+TLD
Sbjct: 21  NPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLD 80

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           KNLAT+LFK+LLKYRPEDK AKKER
Sbjct: 81  KNLATSLFKVLLKYRPEDKAAKKER 105



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>RL7A_FUGRU (O57592) 60S ribosomal protein L7a (Surfeit locus protein 3)|
          Length = 265

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 45/85 (52%), Positives = 53/85 (62%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFEKRPK FGIG  + PK+DL RFVKWP                  PPA++QFT+ LD
Sbjct: 28  NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFTQALD 87

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           +  AT LFK+  KYRPE K  KK+R
Sbjct: 88  RQTATQLFKLAHKYRPETKQEKKKR 112



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>RL7A_RAT (P62425) 60S ribosomal protein L7a|
          Length = 265

 Score = 90.9 bits (224), Expect = 7e-19
 Identities = 44/85 (51%), Positives = 52/85 (61%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFEKRPK FGIG  + PK+DL RFVKWP                  PPA++QFT+ LD
Sbjct: 28  NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 87

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           +  AT L K+  KYRPE K  KK+R
Sbjct: 88  RQTATQLLKLAHKYRPETKQEKKQR 112



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>RL7A_MOUSE (P12970) 60S ribosomal protein L7a (Surfeit locus protein 3)|
          Length = 265

 Score = 90.9 bits (224), Expect = 7e-19
 Identities = 44/85 (51%), Positives = 52/85 (61%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFEKRPK FGIG  + PK+DL RFVKWP                  PPA++QFT+ LD
Sbjct: 28  NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 87

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           +  AT L K+  KYRPE K  KK+R
Sbjct: 88  RQTATQLLKLAHKYRPETKQEKKQR 112



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>RL7A_HUMAN (P62424) 60S ribosomal protein L7a (Surfeit locus protein 3) (PLA-X|
           polypeptide)
          Length = 265

 Score = 90.9 bits (224), Expect = 7e-19
 Identities = 44/85 (51%), Positives = 52/85 (61%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFEKRPK FGIG  + PK+DL RFVKWP                  PPA++QFT+ LD
Sbjct: 28  NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 87

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           +  AT L K+  KYRPE K  KK+R
Sbjct: 88  RQTATQLLKLAHKYRPETKQEKKQR 112



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>RL7A_DROME (P46223) 60S ribosomal protein L7a|
          Length = 271

 Score = 90.5 bits (223), Expect = 9e-19
 Identities = 44/85 (51%), Positives = 52/85 (61%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           N LFEKRPK FGIG  + PK+DL RFV+WP                  PP +HQF++TLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           K  A  LFK+L KYRPE  +AKK R
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLR 118



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>RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a|
          Length = 265

 Score = 90.5 bits (223), Expect = 9e-19
 Identities = 44/85 (51%), Positives = 51/85 (60%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFEKRPK FGIG  + PK+DL RFVKWP                  PPA++QF + LD
Sbjct: 28  NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYVRLQRHGSILYKRLKVPPAINQFNQALD 87

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           +  AT LFK+  KYRPE K  KK R
Sbjct: 88  RQTATQLFKLAHKYRPETKQEKKRR 112



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>RL7A_CHICK (P32429) 60S ribosomal protein L7a|
          Length = 265

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 43/85 (50%), Positives = 52/85 (61%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFEKRPK FGIG  + PK+DL RFVKWP                  PPA++QF++ LD
Sbjct: 28  NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQALD 87

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           +  AT L K+  KYRPE K  KK+R
Sbjct: 88  RQTATQLLKLAHKYRPETKQEKKQR 112



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>RL8_SCHPO (O13672) 60S ribosomal protein L8 (L7A) (L4)|
          Length = 258

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 43/85 (50%), Positives = 51/85 (60%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLF  RP+ FGIG  + PK+DL RFVKWP                  PPA+ QF +TLD
Sbjct: 23  NPLFVSRPRSFGIGQDIQPKRDLSRFVKWPEYIRLQRRRKILNLRLKVPPAIAQFQKTLD 82

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           KN AT +FK+L KYRPE    KK+R
Sbjct: 83  KNTATQVFKLLNKYRPETAAEKKQR 107



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>RL7A_ANOGA (O76732) 60S ribosomal protein L7a|
          Length = 271

 Score = 80.5 bits (197), Expect = 9e-16
 Identities = 39/85 (45%), Positives = 50/85 (58%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFEKR K +GIG  + PK+DL RFVKWP                  PP ++QFT+TLD
Sbjct: 35  NPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLD 94

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           K  A  + K   KYRPE+ +A+ +R
Sbjct: 95  KPTAQQVMKCWKKYRPENPIARVQR 119



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>RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a|
          Length = 264

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 39/85 (45%), Positives = 45/85 (52%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPLFEKR + F IG  + PKKD+ RFVKWP                  PP ++QF   LD
Sbjct: 29  NPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALD 88

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
              A   FK+L KYRPE   AKK R
Sbjct: 89  SQSARQAFKLLDKYRPESTEAKKNR 113



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>RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (YL5) (RP6)|
          Length = 255

 Score = 77.4 bits (189), Expect = 8e-15
 Identities = 38/85 (44%), Positives = 45/85 (52%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPL    PK FGIG A+ PK++L R+VKWP                  PP + QF  TLD
Sbjct: 23  NPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPPTIAQFQYTLD 82

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           +N A   FK+  KYRPE    KKER
Sbjct: 83  RNTAAETFKLFNKYRPETAAEKKER 107



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>RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (YL5) (RP6)|
           (Maintenance of killer protein 7)
          Length = 255

 Score = 77.4 bits (189), Expect = 8e-15
 Identities = 38/85 (44%), Positives = 45/85 (52%)
 Frame = +2

Query: 149 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALHQFTRTLD 328
           NPL    PK FGIG A+ PK++L R+VKWP                  PP + QF  TLD
Sbjct: 23  NPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRVQRQKKILSIRLKVPPTIAQFQYTLD 82

Query: 329 KNLATNLFKMLLKYRPEDKVAKKER 403
           +N A   FK+  KYRPE    KKER
Sbjct: 83  RNTAAETFKLFNKYRPETAAEKKER 107



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>RL7A_PIG (Q29375) 60S ribosomal protein L7a (Fragment)|
          Length = 132

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 338 ATNLFKMLLKYRPEDKVAKKER 403
           AT L K+  KYRPE K  KK+R
Sbjct: 3   ATQLLKVAHKYRPETKQEKKQR 24



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>KCNKA_HUMAN (P57789) Potassium channel subfamily K member 10 (Outward|
           rectifying potassium channel protein TREK-2) (TREK-2
           K(+) channel subunit)
          Length = 538

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 162 SNSGFTTLSAAFFFAGTGALPPRFGAISPAAGG 64
           +NS    L +AFFFAGT      +G I+P+  G
Sbjct: 147 NNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEG 179



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>MAGC2_HUMAN (Q9UBF1) Melanoma-associated antigen C2 (MAGE-C2 antigen) (MAGE-E1|
           antigen) (Hepatocellular carcinoma-associated antigen
           587) (Cancer-testis antigen 10) (CT10)
          Length = 373

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 293 PPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKE 400
           P +   FT TLD+ +A  +  +LLKY  E+ V + E
Sbjct: 131 PDSESSFTYTLDEKVAELVEFLLLKYEAEEPVTEAE 166


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.302    0.123    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,813,944
Number of Sequences: 219361
Number of extensions: 352809
Number of successful extensions: 603
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
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