ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart50g07 |
|---|---|
| Clone Library Name | barley_pub |
>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)| Length = 222 Score = 114 bits (286), Expect = 4e-26 Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 1/109 (0%) Frame = +2 Query: 83 EEFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMV 262 ++FDFFY V QWPG++CD++ CC+P TGKPA DFGIHGLWPNY KT G Sbjct: 20 QDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNY---KTGG--------- 67 Query: 263 TRRRKKCWPESCNSE-RLKLWEIRDLVTELDANWPTLACKGGKSFEFWT 406 WP++CN + R + DL+++L WPTL+C +FWT Sbjct: 68 -------WPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWT 109
>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)| Length = 230 Score = 113 bits (282), Expect = 1e-25 Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 1/108 (0%) Frame = +2 Query: 83 EEFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMV 262 E+FDFFY VQQWPGS+CDT+K CC+P++GKPA DFGIHGLWPNY DG Sbjct: 28 EDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWPNYK--------DGT---- 75 Query: 263 TRRRKKCWPESCN-SERLKLWEIRDLVTELDANWPTLACKGGKSFEFW 403 +P +C+ S+ I DL+T + +WPTLAC G FW Sbjct: 76 -------YPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFW 116
>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)| (RNase LX) Length = 237 Score = 112 bits (281), Expect = 2e-25 Identities = 48/109 (44%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Frame = +2 Query: 83 EEFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMV 262 ++FDFFY VQQWP S+CDT++ CC+P TGKP DF IHGLWPNY + K Sbjct: 26 QDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYKDGK------------ 73 Query: 263 TRRRKKCWPESCNSE-RLKLWEIRDLVTELDANWPTLACKGGKSFEFWT 406 WP++C+ E L E DL++ ++ NWP+LAC +FW+ Sbjct: 74 -------WPQNCDRESSLDESEFSDLISTMEKNWPSLACPSSDGLKFWS 115
>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)| (RNase LE) Length = 230 Score = 111 bits (277), Expect = 5e-25 Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Frame = +2 Query: 83 EEFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMV 262 ++FDFFY VQQWPGS+CDTK+ CC+P TGKPA DFGIHGLWPN DG Sbjct: 27 KDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWPN--------NNDGT---- 74 Query: 263 TRRRKKCWPESCN-SERLKLWEIRDLVTELDANWPTLACKGGKSFEFWT 406 +P +C+ + +I DL++ + NWPTLAC G FW+ Sbjct: 75 -------YPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWS 116
>RNS2_ARATH (P42814) Ribonuclease 2 precursor (EC 3.1.27.1)| Length = 259 Score = 65.1 bits (157), Expect = 4e-11 Identities = 42/116 (36%), Positives = 53/116 (45%), Gaps = 10/116 (8%) Frame = +2 Query: 86 EFDFFYLVQQWPGSFCDTKKGCCFPDT---GKPA-TDFGIHGLWPNYAECKTRGELDGAL 253 EFD+F L QWPG++C + CC + G A T F IHGLWP+Y DG+ Sbjct: 31 EFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYN--------DGS- 81 Query: 254 EMVTRRRKKCWPESCNSERLKLWEIRDLVTELDANWPTL------ACKGGKSFEFW 403 WP C K EI L+ L+ WP+L +C GGK FW Sbjct: 82 ----------WPSCCYRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKG-SFW 126
>RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RNase DdI)| Length = 223 Score = 54.7 bits (130), Expect = 5e-08 Identities = 34/107 (31%), Positives = 53/107 (49%) Frame = +2 Query: 86 EFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMVT 265 +FDF+ VQQW S+CD++ C + + A F IHGLWP + DG+ Sbjct: 31 DFDFYLFVQQWIYSYCDSQ--TCIQNKEREA--FTIHGLWPENS--------DGS----- 73 Query: 266 RRRKKCWPESCNSERLKLWEIRDLVTELDANWPTLACKGGKSFEFWT 406 +P C+ + I+DL +L+ +WP+L G + +FWT Sbjct: 74 ------YPSFCSGPSFNVNAIQDLEDQLNFDWPSLT---GPNTDFWT 111
>RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 235 Score = 51.6 bits (122), Expect = 4e-07 Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 5/111 (4%) Frame = +2 Query: 86 EFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMVT 265 +FD+F LV QWP S+C K C P T P + F IHGLWP+ Sbjct: 32 QFDYFKLVLQWPNSYCSLKTTHC-PRTRLP-SQFTIHGLWPD------------------ 71 Query: 266 RRRKKCWP-ESCNSERLKLWEIRD--LVTELDANWPTLACKGGK--SFEFW 403 K WP +C + +I D L+ +L +WP L + K +FW Sbjct: 72 ---NKSWPLSNCRDTSADVLKITDKGLIQDLAVHWPDLTRRQRKVPGQKFW 119
>RNOY_CRAGI (Q7M456) Ribonuclease Oy (EC 3.1.27.-) (RNase Oy)| Length = 213 Score = 51.2 bits (121), Expect = 6e-07 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Frame = +2 Query: 83 EEFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMV 262 +++++F QQWP + C K C PD+ +GIHGLWP+ ++ +++G Sbjct: 1 KDWNYFTFAQQWPIAVCAEHKSCFIPDS---VVGWGIHGLWPS-SDTESKG--------- 47 Query: 263 TRRRKKCWPESCN-SERLKLWEIRDLVTELDANWPTLACKGGKSFEFW 403 PE+CN S + + LV EL WP L K+ FW Sbjct: 48 --------PENCNGSWPFDINNVMPLVPELKKYWPNL-YPDTKANSFW 86
>RNS4_ANTHI (Q38717) Ribonuclease S-4 precursor (EC 3.1.27.1) (Stylar| glycoprotein 4) (S4-RNase) Length = 233 Score = 46.2 bits (108), Expect = 2e-05 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 3/107 (2%) Frame = +2 Query: 92 DFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWP-NYAECKTRGELDGALEMVTR 268 D+ LV QWP SFC C ++F IHGLWP NY TR Sbjct: 34 DYLKLVLQWPKSFCLINSRKC--QRNPLPSNFTIHGLWPDNY----------------TR 75 Query: 269 RRKKCWPESCNSERLKLWEIRDLVTELDANWPTLACK--GGKSFEFW 403 + P+SC + + + D+ ++ +WP L + G S+ FW Sbjct: 76 QA----PQSCTTNNFQRFTDTDIEQRMEESWPDLKQQSIAGLSYNFW 118
>RNS3_PETHY (Q40875) Ribonuclease S-3 precursor (EC 3.1.27.1) (Stylar| glycoprotein 3) (S3-RNase) Length = 222 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/40 (47%), Positives = 23/40 (57%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWP 208 FD+F LV WP SFC K C + + +F IHGLWP Sbjct: 24 FDYFQLVLTWPASFCYPKNKC-----QRRSNNFTIHGLWP 58
>RNMC_MOMCH (P23540) Ribonuclease MC (EC 3.1.27.1) (RNase MC)| Length = 191 Score = 42.0 bits (97), Expect = 3e-04 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWP-----NYAECKTRGELD-GA 250 FD F+ VQQWP + C +K P +G F IHGLWP + C D Sbjct: 1 FDSFWFVQQWPPAVCSFQKSGSCPGSG--LRTFTIHGLWPQGSGTSLTNCPQGSPFDITK 58 Query: 251 LEMVTRRRKKCWPESCNSERLKLW 322 + + + WP + + W Sbjct: 59 ISHLQSQLNTLWPNVLRANNQQFW 82
>RNS4_PYRPY (Q40966) Ribonuclease S-4 precursor (EC 3.1.27.1) (S4-RNase)| Length = 228 Score = 41.6 bits (96), Expect = 5e-04 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 7/101 (6%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNY------AECKTRGELDGA 250 FD+F QQ+ + C++ C T K F +HGLWP+ +CKT Sbjct: 28 FDYFQFTQQYQPAVCNSNPTPCNDPTDKL---FTVHGLWPSNRNGPDPEKCKTTTMNSQK 84 Query: 251 LEMVTRRRKKCWPESCN-SERLKLWEIRDLVTELDANWPTL 370 + +T + + WP N S+ + WE R+ + +PT+ Sbjct: 85 IGNMTAQLEIIWPNVLNRSDHVGFWE-REWLKHGTCGYPTI 124
>RNT2_HUMAN (O00584) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)| Length = 256 Score = 40.8 bits (94), Expect = 8e-04 Identities = 29/106 (27%), Positives = 41/106 (38%) Frame = +2 Query: 86 EFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMVT 265 E+ +VQ WP + C+ + C P + IHGLWP+ +E R Sbjct: 33 EWKKLIMVQHWPETVCEKIQNDC----RDPPDYWTIHGLWPDKSEGCNRS---------- 78 Query: 266 RRRKKCWPESCNSERLKLWEIRDLVTELDANWPTLACKGGKSFEFW 403 WP L EI+DL+ E+ A WP + FW Sbjct: 79 ------WP-------FNLEEIKDLLPEMRAYWPDVIHSFPNRSRFW 111
>RNS2_SOLTU (Q01796) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 223 Score = 39.3 bits (90), Expect = 0.002 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +2 Query: 86 EFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPN 211 +FD+ LV WP SFC + C P +F IHGLWP+ Sbjct: 23 DFDYMQLVLTWPRSFCYPRGFC----NRIPPNNFTIHGLWPD 60
>RNT2_MOUSE (Q9CQ01) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)| Length = 259 Score = 38.5 bits (88), Expect = 0.004 Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 2/108 (1%) Frame = +2 Query: 86 EFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFG-IHGLWPNYAECKTRGELDGALEMV 262 E+ L Q WP + C C + + D+ IHGLWP+ AE Sbjct: 38 EWKKLILTQHWPPTVCKEVNSC------QDSLDYWTIHGLWPDRAE-------------- 77 Query: 263 TRRRKKCWPESCN-SERLKLWEIRDLVTELDANWPTLACKGGKSFEFW 403 CN S L EI+DL+ ++ WP + + +FW Sbjct: 78 ----------DCNQSWHFNLDEIKDLLRDMKIYWPDVIHRSSNRSQFW 115
>RNS1_PYRPY (O80322) Ribonuclease S-1 precursor (EC 3.1.27.1) (S1-RNase)| Length = 228 Score = 37.7 bits (86), Expect = 0.007 Identities = 23/94 (24%), Positives = 38/94 (40%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMVTR 268 +D+F QQ+ + C++ C T K F +HGLWP+ Sbjct: 28 YDYFQFTQQYQPAVCNSNPTPCNDPTDKL---FTVHGLWPS------------------- 65 Query: 269 RRKKCWPESCNSERLKLWEIRDLVTELDANWPTL 370 R PE C + L +I ++ +L+ WP + Sbjct: 66 NRNGPDPEKCKTTALNSQKIGNMTAQLEIIWPNV 99
>RN28_PANGI (P83618) Ribonuclease-like storage protein precursor (Root 28 kDa| major protein) Length = 238 Score = 37.7 bits (86), Expect = 0.007 Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 7/83 (8%) Frame = +2 Query: 98 FYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDG------ALEM 259 F L QWP FC+ C DT F IHGL+P A+ DG ++ Sbjct: 32 FALRLQWPAGFCEVNNAC---DTKSLLNTFTIHGLYPYNAKGTPALYCDGTAFDVNSVSD 88 Query: 260 VTRRRKKCWP-ESCNSERLKLWE 325 WP N+E ++ WE Sbjct: 89 FLAEMHLAWPSHETNTEDIQFWE 111
>RNS7_PYRPY (O80325) Ribonuclease S-7 precursor (EC 3.1.27.1) (S7-RNase)| Length = 226 Score = 36.6 bits (83), Expect = 0.015 Identities = 23/94 (24%), Positives = 40/94 (42%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMVTR 268 +D+F QQ+ + C++K C P F +HGLWP+ L+G Sbjct: 28 YDYFQFTQQYQPAVCNSKPTPC---KDPPDKLFTVHGLWPS--------NLNGP------ 70 Query: 269 RRKKCWPESCNSERLKLWEIRDLVTELDANWPTL 370 PE+C + + I+++ +L WP + Sbjct: 71 -----HPENCTNATVNPHRIKNIQAQLKIIWPNV 99
>RNS7_NICAL (Q40381) Ribonuclease S-7 precursor (EC 3.1.27.1) (Stylar| glycoprotein 7) (S7-RNase) Length = 218 Score = 36.6 bits (83), Expect = 0.015 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPN 211 F++ LV QWP +FC T P+ +F IHGLWP+ Sbjct: 24 FEYMQLVLQWPTAFCHTTPCKRIPN------NFTIHGLWPD 58
>RNS6_NICAL (Q40379) Ribonuclease S-6 precursor (EC 3.1.27.1) (Stylar| glycoprotein 6) (S6-RNase) Length = 215 Score = 36.6 bits (83), Expect = 0.015 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPN 211 F++ LV QWP +FC T P ++F IHGLWP+ Sbjct: 24 FEYMQLVLQWPTAFCHTTPCKNIP------SNFTIHGLWPD 58
>RNS2_PYRPY (Q40965) Ribonuclease S-2 precursor (EC 3.1.27.1) (S2-RNase)| Length = 221 Score = 36.2 bits (82), Expect = 0.019 Identities = 25/95 (26%), Positives = 43/95 (45%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMVTR 268 +D+F QQ+ +FC++ C P F +HGLWP+ T+ D Sbjct: 23 YDYFQFTQQYQQAFCNSNPTPC---KDPPDKLFTVHGLWPS-----TKVGRD-------- 66 Query: 269 RRKKCWPESCNSERLKLWEIRDLVTELDANWPTLA 373 PE C ++R + +I+ L +L+ WP ++ Sbjct: 67 ------PEYCKTKRYR--KIQRLEPQLEIIWPNVS 93
>RNS2_NICAL (P04007) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 214 Score = 34.3 bits (77), Expect = 0.072 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPN 211 F++ LV WP +FC K + T+F IHGLWP+ Sbjct: 24 FEYMQLVLTWPITFCRIKH------CERTPTNFTIHGLWPD 58
>RNPB_PHYPO (P81477) Ribonuclease Phyb (EC 3.1.27.-) (RNase Phyb)| Length = 180 Score = 33.5 bits (75), Expect = 0.12 Identities = 27/106 (25%), Positives = 38/106 (35%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMVTR 268 FDFF V +W S F IHGLWP + DG+ Sbjct: 5 FDFFIFVTEWNASISTEY--------------FTIHGLWPENS--------DGS------ 36 Query: 269 RRKKCWPESCNSERLKLWEIRDLVTELDANWPTLACKGGKSFEFWT 406 +P C+S + I DL+ + WP+ G + FW+ Sbjct: 37 -----YPSGCSSGKFSTSTISDLIDTMQV-WPSFT---GDNASFWS 73
>RNI_AERHY (Q07465) Ribonuclease precursor (EC 3.1.27.-)| Length = 215 Score = 33.1 bits (74), Expect = 0.16 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Frame = +2 Query: 86 EFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNY-----AECKTRGELDGA 250 EFD++ + W C K D F +HGLWP Y + C TR LD A Sbjct: 28 EFDYYAMALSWSPEHCAIKPAD--RDQCSRQLGFVLHGLWPQYQRGYPSSC-TRERLDPA 84 Query: 251 LE 256 +E Sbjct: 85 ME 86
>RNS11_NICAL (Q7SID5) Ribonuclease S-F11 (EC 3.1.27.1) (Stylar glycoprotein F11)| (SF11-RNase) Length = 196 Score = 32.0 bits (71), Expect = 0.36 Identities = 19/49 (38%), Positives = 24/49 (48%) Frame = +2 Query: 86 EFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTR 232 +F++ LV WP SFC C +F IHGLWP+ KTR Sbjct: 1 DFEYLQLVLTWPASFCYANH-C----ERIAPNNFTIHGLWPD--NVKTR 42
>RNS3_PYRPY (O80323) Ribonuclease S-3 precursor (EC 3.1.27.1) (S3-RNase)| Length = 222 Score = 31.6 bits (70), Expect = 0.47 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPN 211 +D+F QQ+ + C++ + C P F +HGLWP+ Sbjct: 23 YDYFQFTQQYQLAVCNSNRTLC---KDPPDKLFTVHGLWPS 60
>RNS5_PYRPY (P93460) Ribonuclease S-5 precursor (EC 3.1.27.1) (S5-RNase)| Length = 227 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPN 211 +D+F QQ+ + C++ + C P F +HGLWP+ Sbjct: 28 YDYFQFTQQYQLAVCNSNRTPC---KDPPDKLFTVHGLWPS 65
>RNT2_PIG (Q7M329) Ribonuclease T2 (EC 3.1.27.-)| Length = 200 Score = 29.6 bits (65), Expect = 1.8 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 2/108 (1%) Frame = +2 Query: 86 EFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYA-ECKTRGELDGALEMV 262 E+ +V WP + C+ K + P + IHGLWP+ + EC Sbjct: 2 EWKKLIMVHHWPMTVCNEK------NCEHPPDYWTIHGLWPDKSGEC------------- 42 Query: 263 TRRRKKCWPESCNSERLKLWEIRDLVTELDANWP-TLACKGGKSFEFW 403 + WP + + EI+ L+ ++ WP L S FW Sbjct: 43 ----NRSWPFNPD-------EIKGLLPDMRLYWPDVLHSSPNHSVHFW 79
>TOCC_MAIZE (Q94FY8) Probable tocopherol cyclase, chloroplast precursor| (Sucrose export defective 1) Length = 474 Score = 29.3 bits (64), Expect = 2.3 Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 17/99 (17%) Frame = +2 Query: 158 PDTGKPATDFGIHGLWPNYAECKTR--------GELDGALEMVTRRR---KKCWPESCNS 304 P TG + D G+ GLW E KT E AL T C Sbjct: 342 PWTGTVSWDIGLWGLWKMSGENKTHLVEIEATTAESGTALRAPTIEAGLVPACKDTCYGD 401 Query: 305 ERLKLWEIR------DLVTELDANWPTLACKGGKSFEFW 403 RL+LWE + +++ + +N L GG F W Sbjct: 402 LRLQLWEKKYDGSKGEMILDATSNMAALEVGGGPWFNGW 440
>CAPP_RALSO (Q8XWW2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 985 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +1 Query: 10 LTGQDEARRALGPAPAFS 63 LTG+D R A+GPAPA++ Sbjct: 399 LTGEDAGRHAVGPAPAYT 416
>JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylation protein 1B| (EC 1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and leucine-rich repeat protein 10) (F-box protein FBL10) Length = 1309 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = +2 Query: 164 TGKPATDFGIHGLWPNYAECKTRGELDGALEMVTR--RRKKCWPESCNSERLKLWEIRDL 337 TG PAT+ + W + E + +G L +E + KKC PE + L ++++ Sbjct: 468 TGSPATE--VSTKWTHLTEFELKG-LKALVEKLESLPENKKCVPEGIEDPQALLEGVKNV 524 Query: 338 VTELDANWPTLACKG 382 + E + PTLA G Sbjct: 525 LKEHVDDDPTLAITG 539
>JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylation protein 1B| (EC 1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and leucine-rich repeat protein 10) (F-box protein FBL10) (Protein JEMMA) (Jumonji containing domain EMSY-interactor methyltr Length = 1336 Score = 28.9 bits (63), Expect = 3.0 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = +2 Query: 164 TGKPATDFGIHGLWPNYAECKTRGELDGALEMVTR--RRKKCWPESCNSERLKLWEIRDL 337 TG PAT+ + W + E + +G L +E + KKC PE + L ++++ Sbjct: 495 TGSPATE--VSAKWTHLTEFELKG-LKALVEKLESLPENKKCVPEGIEDPQALLEGVKNV 551 Query: 338 VTELDANWPTLACKG 382 + E + P+LA G Sbjct: 552 LKEHADDDPSLAITG 566
>RNS6_PYRPY (O80324) Ribonuclease S-6 precursor (EC 3.1.27.1) (S6-RNase)| Length = 229 Score = 28.9 bits (63), Expect = 3.0 Identities = 21/94 (22%), Positives = 38/94 (40%) Frame = +2 Query: 89 FDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDFGIHGLWPNYAECKTRGELDGALEMVTR 268 +++F QQ+ + C++ C P F +HGLWP+ G+ Sbjct: 28 YNYFQFTQQYQPAVCNSNPTPC---KDPPDKLFTVHGLWPS----NDVGD---------- 70 Query: 269 RRKKCWPESCNSERLKLWEIRDLVTELDANWPTL 370 P C ++ +K +I +L +L WP + Sbjct: 71 -----DPIYCKNKTIKSQQIGNLTAQLIIIWPNV 99
>RDRP_CARMV (P04518) Probable RNA-directed RNA polymerase (EC 2.7.7.48)| Length = 867 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +2 Query: 248 ALEMVTRRRKKCWPESCNS-ERLKLWEIRDLVTELDANWPTLACKGG 385 A+ + R+ CW N +R + WE+ +V D+N P KGG Sbjct: 201 AMASILNRKGWCWRLMVNPLDRARWWEMWCVVNGFDSNKPVTFPKGG 247
>ZFP37_RAT (O88553) Zinc finger protein 37 (Zfp-37)| Length = 601 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 203 RARGCRSPSPACRCPGSSTPSSCHR 129 R CRSPS + + PGS P C++ Sbjct: 237 RKSPCRSPSKSDKAPGSGKPYECNQ 261
>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1| light chain LC2] Length = 2774 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/50 (28%), Positives = 21/50 (42%) Frame = +2 Query: 227 TRGELDGALEMVTRRRKKCWPESCNSERLKLWEIRDLVTELDANWPTLAC 376 TRGE G + W + ++ W RD+ + DA W L+C Sbjct: 1624 TRGEPVGG----QKEPVPAWEGKSPEQEVRYWRDRDITLQQDAYWRELSC 1669
>DNAK_HALSA (Q9HRY2) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 629 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +1 Query: 136 HEEGVLLPGHRQAGDGLRHP-RALAQLXXXXXXXXXXXXLGDGDQAEEEVLAGVLQQ 303 H++G LL G +++P + +A + LGD + EE+ A +LQ+ Sbjct: 44 HDDGELLVGKPAKNQAVQNPDQTIASIKRHMGEEDYTVALGDDEYTPEEISARILQK 100
>DAPA_CHLAB (Q5L5G7) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)| Length = 288 Score = 28.1 bits (61), Expect = 5.2 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Frame = +2 Query: 95 FFYLVQQWPGSFCDTKKGCCFPDTGKPATDF----GIHGLWPNYAECKTRGELDGALEMV 262 FFY ++ GS K C + + ++DF G GLWP EC RG L L + Sbjct: 152 FFYGLKDSGGSI----KHC--QEYAQMSSDFVLYCGDDGLWPQMYECGARG-LISVLSNI 204 Query: 263 TRRRKKCWPESCNSE-RLKLW 322 + + W E + + R LW Sbjct: 205 WPKEAREWVEDPHHQYRADLW 225
>UL50_HCMVA (P16791) Protein UL50 (HFLF4 protein)| Length = 397 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 253 GDGDQAEEEVLAGVLQQRAPQALGNQGPGDGAGRQLAD 366 GD D+ EEE+LA + +A A Q G A R L + Sbjct: 270 GDADEEEEELLALAGEGKAAAAAAGQDVGGSARRPLEE 307
>PLCL4_HUMAN (O75038) 1-phosphatidylinositol-4,5-bisphosphate| phosphodiesterase-like 4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-like 4) (Phospholipase C-like 4) (Fragment) Length = 1182 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 307 APQALGNQGPGDGAGRQLADAGVQGREELRV 399 AP+A +GPG G+ R A A V + +RV Sbjct: 997 APEAPAQEGPGSGSPRGKAPAAVAEKSPVRV 1027
>SEM4B_MOUSE (Q62179) Semaphorin-4B precursor (Semaphorin C) (Sema C)| Length = 823 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -2 Query: 196 VDAEVRRRLAGVREAAPLLRVTEGPWPLLHKVEEIEFLRRGDG 68 +D +VR RL ++ A RV P LH ++ FL GDG Sbjct: 416 MDGQVRSRLLLLQPRARYQRVAVHRVPGLHSTYDVLFLGTGDG 458
>CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5)| Length = 209 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = -1 Query: 197 RGCRSPSPACRCPGSSTPSSCHR 129 R C P AC C +S P SC R Sbjct: 53 RSCSLPRSACLCSRNSAPGSCCR 75
>IF2_RHOS4 (Q3IYN5) Translation initiation factor IF-2| Length = 836 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = -2 Query: 193 DAEVRRRLAGVREAAPLLRVTEGPWPLLHKVEEIEFLRRGDGDERKQEQGRE 38 DAE+ RRLA +R A K+ E+E +R +ER++E+ R+ Sbjct: 74 DAEMERRLAALRAA---------------KLREVEDAKRRADEERQREEERQ 110
>YL82_CAEEL (P34440) Hypothetical histone H3-like protein F54C8.2 in chromosome| III Length = 261 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +1 Query: 262 DQAEEEVLAGVLQQRAPQALGNQGPGDGA-GRQLADAGVQGREELRVL 402 D ++EE+ A ++P +GN+ DG GR + AG + +R++ Sbjct: 105 DSSDEEITAANSHHQSPINVGNRNDTDGTNGRNGSRAGSSSSDRVRMI 152
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -3 Query: 246 PSSSPRVLHSA*LGQSPWMP 187 PSSSP + H A LG SP +P Sbjct: 722 PSSSPSLPHQAPLGDSPHLP 741
>Y1133_METJA (Q58533) Hypothetical protein MJ1133| Length = 421 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = -2 Query: 178 RRLAGVREAAPLLR---VTEGPWPLLHKVEEIEFLRRGDG 68 R L GVR P ++ +TEG LH V +IE GDG Sbjct: 288 RILKGVRNTVPTVKNIVLTEGGCCWLHAVVQIEKRTEGDG 327
>GLXK_BACSU (P42100) Glycerate kinase (EC 2.7.1.31)| Length = 382 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = +1 Query: 250 LGDGDQAEEEVLAGVLQQRAPQALGNQG----PGDGAGRQLADAGVQG 381 +G G A + AG++Q + L N G PG GA QLA V G Sbjct: 131 IGIGGSATNDGGAGMIQALGGRLLDNSGSEIGPGGGALSQLASIDVSG 178
>TS1R3_PANTR (Q717C2) Taste receptor type 1 member 3 precursor (Sweet taste| receptor T1R3) Length = 852 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +1 Query: 310 PQALGNQGPGDGAGRQLADAGVQGREE 390 P+ GPGD GR D G QG+ E Sbjct: 826 PEFFLGGGPGDAQGRNDGDTGNQGKHE 852
>TS1R3_GORGO (Q717C1) Taste receptor type 1 member 3 precursor (Sweet taste| receptor T1R3) Length = 852 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +1 Query: 310 PQALGNQGPGDGAGRQLADAGVQGREE 390 P+ GPGD GR D G QG+ E Sbjct: 826 PEFFLGGGPGDAQGRNDGDTGNQGKHE 852 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,491,200 Number of Sequences: 219361 Number of extensions: 832450 Number of successful extensions: 3071 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 2932 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3039 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
