ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart50g06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_471729.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 79.8 bits (40), Expect = 6e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || ||||||||| ||||| | |||| Sbjct: 26 agctcccccacgtcgccatcttcccgttcatggccaggggccacaccgtcccgatgaccc 85 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttcaccaccccag 184 |||| || ||| || | ||||| ||||||||||||| |||||||||| |||||| | Sbjct: 86 acctcgcctgccttctccgccgccgcggcctcgccaccgtcaccttcttcagcaccccgg 145 Query: 185 gcaacgcg 192 |||||||| Sbjct: 146 gcaacgcg 153
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 79.8 bits (40), Expect = 6e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || ||||||||| ||||| | |||| Sbjct: 37690 agctcccccacgtcgccatcttcccgttcatggccaggggccacaccgtcccgatgaccc 37749 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttcaccaccccag 184 |||| || ||| || | ||||| ||||||||||||| |||||||||| |||||| | Sbjct: 37750 acctcgcctgccttctccgccgccgcggcctcgccaccgtcaccttcttcagcaccccgg 37809 Query: 185 gcaacgcg 192 |||||||| Sbjct: 37810 gcaacgcg 37817
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 6e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || ||||||||| ||||| | |||| Sbjct: 13824031 agctcccccacgtcgccatcttcccgttcatggccaggggccacaccgtcccgatgaccc 13824090 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttcaccaccccag 184 |||| || ||| || | ||||| ||||||||||||| |||||||||| |||||| | Sbjct: 13824091 acctcgcctgccttctccgccgccgcggcctcgccaccgtcaccttcttcagcaccccgg 13824150 Query: 185 gcaacgcg 192 |||||||| Sbjct: 13824151 gcaacgcg 13824158
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 79.8 bits (40), Expect = 6e-12 Identities = 103/124 (83%) Strand = Plus / Minus Query: 82 atcttcccattcatggcgagaggccacaccatcccgctcacccacctggcgcacctccta 141 |||||||| |||||||||| |||||||||||||||||||| ||| || || || ||| Sbjct: 9779362 atcttcccgttcatggcgaaaggccacaccatcccgctcatccagctcgccaactacctg 9779303 Query: 142 ctacgccggcgcctcgccaccgtgaccttcttcaccaccccaggcaacgcggccttcgta 201 | | || || ||||||||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 9779302 cgtcaccaccggctcgccaccgtaaccttcttcaccaccccgggcaacgccgcgttcgtc 9779243 Query: 202 cgtg 205 |||| Sbjct: 9779242 cgtg 9779239 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || || |||||| |||||| || || Sbjct: 12720308 agctcccccacgtcgccatcttcccgttcatggccagggggcacaccgtcccgcccatcc 12720249 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttcaccaccccag 184 |||| || |||||||| | | ||| |||||||| |||| ||| ||||||||||||| | Sbjct: 12720248 acctcgctcacctcctccgccaccgcggcctcgccgccgtcaccctcttcaccaccccgg 12720189 Query: 185 gcaacgcg 192 ||||||| Sbjct: 12720188 ccaacgcg 12720181 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 150 gcgcctcgccaccgtgaccttcttcaccaccccaggcaacgcggccttcgt 200 |||||||||| |||| ||||||||||||||||| |||||||| |||||||| Sbjct: 9739231 gcgcctcgccgccgtcaccttcttcaccaccccgggcaacgccgccttcgt 9739181 Score = 60.0 bits (30), Expect = 6e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || || |||||| ||||||||| || Sbjct: 12724454 agctcccccacgtcgccatcttcccgttcatggccagggggcacaccgtcccgctcatcc 12724395 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttc 174 || | || |||||||| | ||||| |||||||| |||| ||| ||||| Sbjct: 12724394 acttcgctcacctcctccgccgccgcggcctcgccgccgtcaccctcttc 12724345 Score = 56.0 bits (28), Expect = 9e-05 Identities = 85/104 (81%) Strand = Plus / Minus Query: 313 ttcgccgccttcgcagaggccacgtcggcgctgcggccgcacttcgaggaggcgctcgcg 372 |||| ||||||||| ||| |||||||| ||||||||||| ||||||| | | |||| Sbjct: 9739035 ttcgtcgccttcgcggagtccacgtcgctgctgcggccgcggttcgaggcgtccgtcgcc 9738976 Query: 373 gccatgcgtccccccgccaccttgctcgtcgctgatgcgttcct 416 |||||||| ||||| || | ||| |||||||| || |||||||| Sbjct: 9738975 gccatgcggcccccggcgagcttcctcgtcgccgacgcgttcct 9738932 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 82 atcttcccattcatggcgagaggccacaccatcccgctca 121 ||||| || |||||||||| ||||||||||||||||||| Sbjct: 9739299 atctttccgttcatggcgaagggccacaccatcccgctca 9739260
>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0040N23 Length = 101061 Score = 79.8 bits (40), Expect = 6e-12 Identities = 103/124 (83%) Strand = Plus / Minus Query: 82 atcttcccattcatggcgagaggccacaccatcccgctcacccacctggcgcacctccta 141 |||||||| |||||||||| |||||||||||||||||||| ||| || || || ||| Sbjct: 51781 atcttcccgttcatggcgaaaggccacaccatcccgctcatccagctcgccaactacctg 51722 Query: 142 ctacgccggcgcctcgccaccgtgaccttcttcaccaccccaggcaacgcggccttcgta 201 | | || || ||||||||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 51721 cgtcaccaccggctcgccaccgtaaccttcttcaccaccccgggcaacgccgcgttcgtc 51662 Query: 202 cgtg 205 |||| Sbjct: 51661 cgtg 51658 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 150 gcgcctcgccaccgtgaccttcttcaccaccccaggcaacgcggccttcgt 200 |||||||||| |||| ||||||||||||||||| |||||||| |||||||| Sbjct: 11650 gcgcctcgccgccgtcaccttcttcaccaccccgggcaacgccgccttcgt 11600 Score = 56.0 bits (28), Expect = 9e-05 Identities = 85/104 (81%) Strand = Plus / Minus Query: 313 ttcgccgccttcgcagaggccacgtcggcgctgcggccgcacttcgaggaggcgctcgcg 372 |||| ||||||||| ||| |||||||| ||||||||||| ||||||| | | |||| Sbjct: 11454 ttcgtcgccttcgcggagtccacgtcgctgctgcggccgcggttcgaggcgtccgtcgcc 11395 Query: 373 gccatgcgtccccccgccaccttgctcgtcgctgatgcgttcct 416 |||||||| ||||| || | ||| |||||||| || |||||||| Sbjct: 11394 gccatgcggcccccggcgagcttcctcgtcgccgacgcgttcct 11351 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 82 atcttcccattcatggcgagaggccacaccatcccgctca 121 ||||| || |||||||||| ||||||||||||||||||| Sbjct: 11718 atctttccgttcatggcgaagggccacaccatcccgctca 11679
>dbj|AK105689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C02, full insert sequence Length = 1704 Score = 79.8 bits (40), Expect = 6e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || ||||||||| ||||| | |||| Sbjct: 190 agctcccccacgtcgccatcttcccgttcatggccaggggccacaccgtcccgatgaccc 249 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttcaccaccccag 184 |||| || ||| || | ||||| ||||||||||||| |||||||||| |||||| | Sbjct: 250 acctcgcctgccttctccgccgccgcggcctcgccaccgtcaccttcttcagcaccccgg 309 Query: 185 gcaacgcg 192 |||||||| Sbjct: 310 gcaacgcg 317
>dbj|AK068128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C23, full insert sequence Length = 1708 Score = 79.8 bits (40), Expect = 6e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || ||||||||| ||||| | |||| Sbjct: 95 agctcccccacgtcgccatcttcccgttcatggccaggggccacaccgtcccgatgaccc 154 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttcaccaccccag 184 |||| || ||| || | ||||| ||||||||||||| |||||||||| |||||| | Sbjct: 155 acctcgcctgccttctccgccgccgcggcctcgccaccgtcaccttcttcagcaccccgg 214 Query: 185 gcaacgcg 192 |||||||| Sbjct: 215 gcaacgcg 222
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || || |||||| |||||| || || Sbjct: 28085 agctcccccacgtcgccatcttcccgttcatggccagggggcacaccgtcccgcccatcc 28026 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttcaccaccccag 184 |||| || |||||||| | | ||| |||||||| |||| ||| ||||||||||||| | Sbjct: 28025 acctcgctcacctcctccgccaccgcggcctcgccgccgtcaccctcttcaccaccccgg 27966 Query: 185 gcaacgcg 192 ||||||| Sbjct: 27965 ccaacgcg 27958 Score = 60.0 bits (30), Expect = 6e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || || |||||| ||||||||| || Sbjct: 32231 agctcccccacgtcgccatcttcccgttcatggccagggggcacaccgtcccgctcatcc 32172 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttc 174 || | || |||||||| | ||||| |||||||| |||| ||| ||||| Sbjct: 32171 acttcgctcacctcctccgccgccgcggcctcgccgccgtcaccctcttc 32122
>ref|XM_450574.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 150 gcgcctcgccaccgtgaccttcttcaccaccccaggcaacgcggccttcgt 200 |||||||||| |||| ||||||||||||||||| |||||||| |||||||| Sbjct: 126 gcgcctcgccgccgtcaccttcttcaccaccccgggcaacgccgccttcgt 176 Score = 56.0 bits (28), Expect = 9e-05 Identities = 85/104 (81%) Strand = Plus / Plus Query: 313 ttcgccgccttcgcagaggccacgtcggcgctgcggccgcacttcgaggaggcgctcgcg 372 |||| ||||||||| ||| |||||||| ||||||||||| ||||||| | | |||| Sbjct: 322 ttcgtcgccttcgcggagtccacgtcgctgctgcggccgcggttcgaggcgtccgtcgcc 381 Query: 373 gccatgcgtccccccgccaccttgctcgtcgctgatgcgttcct 416 |||||||| ||||| || | ||| |||||||| || |||||||| Sbjct: 382 gccatgcggcccccggcgagcttcctcgtcgccgacgcgttcct 425 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 82 atcttcccattcatggcgagaggccacaccatcccgctca 121 ||||| || |||||||||| ||||||||||||||||||| Sbjct: 58 atctttccgttcatggcgaagggccacaccatcccgctca 97
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 150 gcgcctcgccaccgtgaccttcttcaccaccccaggcaacgcggccttcgt 200 |||||||||| |||| ||||||||||||||||| |||||||| |||||||| Sbjct: 179328 gcgcctcgccgccgtcaccttcttcaccaccccgggcaacgccgccttcgt 179278 Score = 56.0 bits (28), Expect = 9e-05 Identities = 85/104 (81%) Strand = Plus / Minus Query: 313 ttcgccgccttcgcagaggccacgtcggcgctgcggccgcacttcgaggaggcgctcgcg 372 |||| ||||||||| ||| |||||||| ||||||||||| ||||||| | | |||| Sbjct: 179132 ttcgtcgccttcgcggagtccacgtcgctgctgcggccgcggttcgaggcgtccgtcgcc 179073 Query: 373 gccatgcgtccccccgccaccttgctcgtcgctgatgcgttcct 416 |||||||| ||||| || | ||| |||||||| || |||||||| Sbjct: 179072 gccatgcggcccccggcgagcttcctcgtcgccgacgcgttcct 179029 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 82 atcttcccattcatggcgagaggccacaccatcccgctca 121 ||||| || |||||||||| ||||||||||||||||||| Sbjct: 179396 atctttccgttcatggcgaagggccacaccatcccgctca 179357
>ref|XM_450781.1| Oryza sativa (japonica cultivar-group), mRNA Length = 753 Score = 60.0 bits (30), Expect = 6e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 65 agctccctcgcgttgccatcttcccattcatggcgagaggccacaccatcccgctcaccc 124 ||||||| | ||| ||||||||||| |||||||| || || |||||| ||||||||| || Sbjct: 10 agctcccccacgtcgccatcttcccgttcatggccagggggcacaccgtcccgctcatcc 69 Query: 125 acctggcgcacctcctactacgccggcgcctcgccaccgtgaccttcttc 174 || | || |||||||| | ||||| |||||||| |||| ||| ||||| Sbjct: 70 acttcgctcacctcctccgccgccgcggcctcgccgccgtcaccctcttc 119
>gb|AE005011.1| Halobacterium sp. NRC-1 section 42 of 170 of the complete genome Length = 11131 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 ccgacggcgtcgacgtggtcga 236 |||||||||||||||||||||| Sbjct: 3977 ccgacggcgtcgacgtggtcga 3956
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 acggcgtcgacgtggtcgagc 238 ||||||||||||||||||||| Sbjct: 257235 acggcgtcgacgtggtcgagc 257215
>dbj|AB218428.1| Schizophyllum commune stk-4 mRNA for putative serine/threonine protein kinase, complete cds Length = 1908 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 294 tgttgcgtcggcgtcctccttcgccgccttcgc 326 ||||||||| |||||| ||||||||||| |||| Sbjct: 186 tgttgcgtccgcgtccgccttcgccgccatcgc 218
>gb|M94865.1|CFIGLUCBET Cellulomonas fimi beta-glucosidase gene, complete cds Length = 1824 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 ccgacggcgtcgacgtggtcg 235 ||||||||||||||||||||| Sbjct: 1468 ccgacggcgtcgacgtggtcg 1448
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete sequence Length = 113193 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcgaggaggcgctcgcggcc 375 |||||||||||||||||||| Sbjct: 111043 tcgaggaggcgctcgcggcc 111062
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 ccgctctgcccgacggcgtcgacgtggt 233 |||| |||||||| |||||||||||||| Sbjct: 728246 ccgcgctgcccgagggcgtcgacgtggt 728273
>ref|XM_369364.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06100.4) partial mRNA Length = 4707 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 acgccggcgcctcgccaccg 163 |||||||||||||||||||| Sbjct: 2769 acgccggcgcctcgccaccg 2750
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 gctctgcccgacggcgtcgacgtg 231 ||||||| |||||||||||||||| Sbjct: 1469601 gctctgcgcgacggcgtcgacgtg 1469624
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcgaggaggcgctcgcggcc 375 |||||||||||||||||||| Sbjct: 3223016 tcgaggaggcgctcgcggcc 3222997
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 cccgacggcgtcgacgtggt 233 |||||||||||||||||||| Sbjct: 1601099 cccgacggcgtcgacgtggt 1601118
>gb|DQ097841.1| Phanerochaete chrysosporium RP-78 Ty3/gypsy LTR retrotransposon PCretro1, complete sequence Length = 9862 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ctctgcccgacggcgtcgacgtgg 232 |||| ||||||||||||||||||| Sbjct: 2700 ctctccccgacggcgtcgacgtgg 2723
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 388 gccaccttgctcgtcgctgatgcg 411 |||||||| ||||||||||||||| Sbjct: 37848 gccacctttctcgtcgctgatgcg 37871
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gcccgacggcgtcgacgtgg 232 |||||||||||||||||||| Sbjct: 253457 gcccgacggcgtcgacgtgg 253438
>emb|AJ298556.1|BHK298556 Bacteriophage HK241 O gene, N gene, M gene, L gene and X gene (partial) Length = 3584 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gaggaggcgctcgcggccatgcgt 381 |||| ||||||||||||||||||| Sbjct: 2421 gaggtggcgctcgcggccatgcgt 2444
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 tcctccttcgccgccttcgc 326 |||||||||||||||||||| Sbjct: 545790 tcctccttcgccgccttcgc 545809
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cacgtcggcgctgcggccgc 352 |||||||||||||||||||| Sbjct: 2728555 cacgtcggcgctgcggccgc 2728574
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 tgcgtcggcgtcctccttcgccgc 320 |||| ||||||||||||||||||| Sbjct: 6350120 tgcggcggcgtcctccttcgccgc 6350097
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 gtgccgctctgcccgacggcgtcg 226 |||||||||||| ||||||||||| Sbjct: 4593967 gtgccgctctgcgcgacggcgtcg 4593990 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 gaggcgctcgcggccatgcg 380 |||||||||||||||||||| Sbjct: 649413 gaggcgctcgcggccatgcg 649432
>dbj|AP003017.1| Mesorhizobium loti MAFF303099 plasmid pMLb DNA, complete genome Length = 208315 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 atgtgatgatgccggccgtg 64 |||||||||||||||||||| Sbjct: 68714 atgtgatgatgccggccgtg 68695
>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1116_C08 Length = 102317 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 tgcgtcggcgtcctccttcgccgc 320 |||| ||||||||||||||||||| Sbjct: 100680 tgcggcggcgtcctccttcgccgc 100657
>dbj|AP003963.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1779_B07 Length = 151427 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 tgcgtcggcgtcctccttcgccgc 320 |||| ||||||||||||||||||| Sbjct: 6687 tgcggcggcgtcctccttcgccgc 6664
>ref|NM_210969.1| Eremothecium gossypii AFR068Cp (AFR068C), mRNA Length = 615 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 tcctccttcgccgccttcgc 326 |||||||||||||||||||| Sbjct: 101 tcctccttcgccgccttcgc 82
>dbj|AK071649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107C10, full insert sequence Length = 1522 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 tgcgtcggcgtcctccttcgccgc 320 |||| ||||||||||||||||||| Sbjct: 93 tgcggcggcgtcctccttcgccgc 116
>gb|AF126260.1|AF126260 Haloferax volcanii alpha-1 subunit of 20S proteasome (psmA1) gene, complete cds Length = 759 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcccgacggcgtcgacgtgg 232 |||||||||||||||||||| Sbjct: 624 gcccgacggcgtcgacgtgg 643
>dbj|D83706.1| Bacillus stearothermophilus DNA for pyruvate carboxylase, complete cds Length = 3727 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 tgccgctctgcccgacggcgtcga 227 |||||||||||| ||||||||||| Sbjct: 2096 tgccgctctgccggacggcgtcga 2073 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,254,437 Number of Sequences: 3902068 Number of extensions: 2254437 Number of successful extensions: 45847 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44929 Number of HSP's gapped (non-prelim): 916 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
