ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart50g01 |
|---|---|
| Clone Library Name | barley_pub |
>Y3846_ARATH (Q8LB17) Protein At3g58460| Length = 403 Score = 102 bits (254), Expect = 2e-22 Identities = 41/64 (64%), Positives = 53/64 (82%) Frame = +1 Query: 184 MRPNIVTEAGISTRLNQWWSSTPFITSGVTIICAAIYLVCLLIGYDSYAEICFLPSAVAS 363 MRPNIVTEAG+ TR+ QWW++ PF+TS V ++C IYL+CLL GYD++ E+CFLPSA+ S Sbjct: 1 MRPNIVTEAGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIIS 60 Query: 364 HFQV 375 FQV Sbjct: 61 RFQV 64
>CCA_NEIG1 (Q5F8K9) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 410 Score = 32.3 bits (72), Expect = 0.29 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 13/103 (12%) Frame = +3 Query: 45 LLLPEVAA--GGPKTLEISP-------LCTPLHRYPNLQLSIPARRSH--QHLRRARDAP 191 +LLPEV A G P+ + P L R ++ LS+P R + L +A+ P Sbjct: 202 VLLPEVDALFGVPQRADYHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPP 261 Query: 192 Q--HRHGGWDFN*VEPVVEQHTVHYFRRYHNMCGDISGVLVDW 314 RH G D N VEPV E V+ R C +++ ++ W Sbjct: 262 DILPRHHGHDINGVEPVRE---VNQRLRAPRQCAELAELVCRW 301
>NAPH_ECOLI (P33934) Ferredoxin-type protein napH| Length = 287 Score = 32.0 bits (71), Expect = 0.37 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = -2 Query: 323 ESYPINKHTRYIAAHIMVTPEVMNGVLLHHWFNLVEIPASVTMLGRISGAPQVL 162 +S I +H RY+ +++ + G L+ W N V + ++G SGA +L Sbjct: 129 QSATIPRHIRYVLLVVILVGSALTGTLIWEWINPVSLMGRSLVMGFGSGALLIL 182
>DHE2_STAAW (Q7A1B9) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 11/58 (18%) Frame = -2 Query: 191 GRISGAPQVLVAPPGRDRELEVGV--SVEGRAEWRD---------LEGFGAAGRDLGK 51 G I+G P VL GRDR +GV ++E A+ R+ ++GFG AG L K Sbjct: 171 GFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAK 228
>DHE2_STAAS (Q6GAW8) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 11/58 (18%) Frame = -2 Query: 191 GRISGAPQVLVAPPGRDRELEVGV--SVEGRAEWRD---------LEGFGAAGRDLGK 51 G I+G P VL GRDR +GV ++E A+ R+ ++GFG AG L K Sbjct: 171 GFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAK 228
>DHE2_STAAR (Q6GID0) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 11/58 (18%) Frame = -2 Query: 191 GRISGAPQVLVAPPGRDRELEVGV--SVEGRAEWRD---------LEGFGAAGRDLGK 51 G I+G P VL GRDR +GV ++E A+ R+ ++GFG AG L K Sbjct: 171 GFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAK 228
>DHE2_STAAN (Q7A6H8) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 11/58 (18%) Frame = -2 Query: 191 GRISGAPQVLVAPPGRDRELEVGV--SVEGRAEWRD---------LEGFGAAGRDLGK 51 G I+G P VL GRDR +GV ++E A+ R+ ++GFG AG L K Sbjct: 171 GFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAK 228
>DHE2_STAAM (Q99VD0) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 11/58 (18%) Frame = -2 Query: 191 GRISGAPQVLVAPPGRDRELEVGV--SVEGRAEWRD---------LEGFGAAGRDLGK 51 G I+G P VL GRDR +GV ++E A+ R+ ++GFG AG L K Sbjct: 171 GFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAK 228
>DHE2_STAAC (Q5HHC7) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 11/58 (18%) Frame = -2 Query: 191 GRISGAPQVLVAPPGRDRELEVGV--SVEGRAEWRD---------LEGFGAAGRDLGK 51 G I+G P VL GRDR +GV ++E A+ R+ ++GFG AG L K Sbjct: 171 GFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAK 228
>MLO4_ARATH (O23693) MLO-like protein 4 (AtMlo4)| Length = 573 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/57 (22%), Positives = 31/57 (54%) Frame = -2 Query: 311 INKHTRYIAAHIMVTPEVMNGVLLHHWFNLVEIPASVTMLGRISGAPQVLVAPPGRD 141 I + + ++ H+M++ +++GVL+ W + +P +V + S + ++A RD Sbjct: 382 IKERSCFMKNHVMISSRLISGVLVQFWCSYGTVPLNVIVTQMGSRHKKAVIAESVRD 438
>PYRF_VIBVY (Q7MLX2) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 232 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 188 RISGAPQVLVAPPGRDRELEVGVSVEGRAEWRDLEGFG 75 R+ A + ++ P G+DR L +GV+V E DL G G Sbjct: 94 RMMTASREILEPYGKDRPLLIGVTVLTSMEQSDLAGIG 131
>PYRF_VIBVU (Q8D8J6) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 232 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 188 RISGAPQVLVAPPGRDRELEVGVSVEGRAEWRDLEGFG 75 R+ A + ++ P G+DR L +GV+V E DL G G Sbjct: 94 RMMTASREILEPYGKDRPLLIGVTVLTSMEQSDLAGIG 131
>PYRF_VIBCH (Q9KQT7) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 231 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = -2 Query: 188 RISGAPQVLVAPPGRDRELEVGVSVEGRAEWRDLEGFG 75 R+ A + ++ P G++R L +GV+V E DL+G G Sbjct: 94 RMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIG 131
>PYRF_VIBPA (Q87N49) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 233 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 188 RISGAPQVLVAPPGRDRELEVGVSVEGRAEWRDLEGFG 75 R+ A + ++ P G+DR L +GV+V E DL G G Sbjct: 94 RMMTASREILEPYGKDRPLLIGVTVLTSMEQSDLAGIG 131
>Y2917_PSESM (Q881H6) UPF0271 protein PSPTO2917| Length = 256 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/57 (28%), Positives = 30/57 (52%) Frame = -2 Query: 182 SGAPQVLVAPPGRDRELEVGVSVEGRAEWRDLEGFGAAGRDLGKKKKCAVAVNYLGS 12 +G P ++ + R + L G+ + + DL+GFG ++ K+ CA+ V LG+ Sbjct: 39 AGDPLIMDSTVRRAKAL--GIDLGAHVGFPDLQGFGRRRMNIELKELCAIVVYQLGA 93
>HIS4_DESVH (P62353) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 249 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +3 Query: 51 LPEVAAGGPKTLEISPLCTPLHRYPNLQLSIPARRSHQ---HLRRARD 185 +P +AAGG TLE PL R NLQ ++ R ++ LR A D Sbjct: 191 VPVIAAGGVATLEDVKALYPLSRTTNLQGAVSGRAIYEGTLDLRTAMD 238
>CBPD_ANAPL (Q90240) Carboxypeptidase D precursor (EC 3.4.17.22)| (Metallocarboxypeptidase D) (gp180) (p170) Length = 1389 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = -2 Query: 167 VLVAPPGRDRELEVGVSVEGRAEW-----RDLEGFGAAGRDLGKKKK 42 V APPG R +G SVEGR W L A +D KKKK Sbjct: 61 VAEAPPGLARLFSIGRSVEGRPLWVLRLTAGLPELPEARQDGEKKKK 107
>FMT_NEIMB (Q9K1K6) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 308 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -2 Query: 218 EIPASVTMLGRISGAPQVLVAPPGRDRELEVGVSVE 111 EIP +T R G L APP + LE+G+ VE Sbjct: 25 EIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
>FMT_NEIMA (Q9JWY9) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 308 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -2 Query: 218 EIPASVTMLGRISGAPQVLVAPPGRDRELEVGVSVE 111 EIP +T R G L APP + LE+G+ VE Sbjct: 25 EIPLVLTQPDRPKGRGMQLTAPPVKQAALELGLRVE 60
>YCF4_PORPU (P51220) Photosystem I assembly protein ycf4| Length = 186 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +1 Query: 229 NQWWSSTPFITS-GVTIICAAIYLVCLLIGYDSYAEICFLPSAVASHF 369 N WW+ST FI + G + + Y L+ + + E+ F+P + F Sbjct: 23 NYWWASTIFIGALGFLLAGLSSYFQTDLLPFANSTELVFIPQGIVMTF 70
>TIPA_STRLI (P0A4T9) HTH-type transcriptional activator tipA| Length = 253 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 111 LHRYPNLQLSIPARRSHQHLRRARDAPQHR 200 LH Y ++ L +P+ RSH RR DA R Sbjct: 19 LHHYDDIGLLVPSERSHAGHRRYSDADLDR 48
>TIPA_STRCO (P0A4T8) HTH-type transcriptional activator tipA| Length = 253 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 111 LHRYPNLQLSIPARRSHQHLRRARDAPQHR 200 LH Y ++ L +P+ RSH RR DA R Sbjct: 19 LHHYDDIGLLVPSERSHAGHRRYSDADLDR 48
>YCF4_MESVI (Q9MUN8) Photosystem I assembly protein ycf4| Length = 187 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +1 Query: 184 MRPNIVTEAGISTRLNQWWSSTPFI-TSGVTIICAAIYLVCLLIGYDSYAEICFLPSAVA 360 +R ++V IS N WW+S + SG I+ + YL L+ + S I F+P + Sbjct: 12 LRESVVGSRRIS---NYWWASVVLLGASGFLIVGISSYLQYDLVPFLSAKNIVFVPQGLV 68 Query: 361 SHF 369 F Sbjct: 69 MCF 71
>S5A2_RAT (P31214) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = -2 Query: 305 KHTRYIAAHIMVTPEVMNGVLLHHWFNLVEIPASVTMLGRISGAPQVLVAPPG 147 KHT +++ + P + WF L E+P+ V +G ++ P+ L PPG Sbjct: 35 KHTESVSSGVPFLPARIA------WF-LQELPSFVVSVGMLAWQPRSLFGPPG 80
>KLHL7_HUMAN (Q8IXQ5) Kelch-like protein 7| Length = 586 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +1 Query: 223 RLNQWWSSTPFITSGVTIICAAI-YLVCLLIGYDSYAEI 336 +LN+W +P GVT+ CAA+ +V +L G+ + Sbjct: 504 KLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRL 542
>K0141_HUMAN (Q14154) Protein KIAA0141| Length = 515 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +3 Query: 72 GPKTLEISPLCTPLHRYPNLQLSIPARRSHQHLRRARDAPQHRHGG 209 GP+ +E +PL R+ + L P QH+ + D P RH G Sbjct: 111 GPQRVEHCSWHSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTG 156
>RL2_SPIKU (P60404) 50S ribosomal protein L2| Length = 278 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -3 Query: 121 YLWRGVQSGEISRVLGPPAATSGRRRNVPLL*ITWARRGR 2 Y+ + SGE+ +VLG AT G N + W + GR Sbjct: 173 YVTIRLTSGEVRKVLGECRATVGEVGNEDYALVNWGKAGR 212
>DTNB_MOUSE (O70585) Dystrobrevin beta (Beta-dystrobrevin) (DTN-B) (MDTN-B)| Length = 700 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +3 Query: 51 LPEVAAGGPKTLEISPLCTPLHRYPNLQLSIPARRSHQHLRRARDA 188 LPE AAGGP P CT + P+ I A +Q + + R A Sbjct: 658 LPEAAAGGP------PACTSIRIPPSWHGLISASGIYQEMEKNRKA 697
>PEPC_STRTR (Q56115) Aminopeptidase C (EC 3.4.22.40) (Bleomycin hydrolase)| Length = 445 Score = 27.7 bits (60), Expect = 7.1 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = -2 Query: 206 SVTMLGRISGAPQV--LVAPPGRDRELEVGVSVEGRAEWRDLEGFGAAGRDLGKKKKCAV 33 +V MLG + GAP V + P R +EL + G + W FG+ + ++K + Sbjct: 277 TVEMLGNVVGAPSVRYINLPMDRFKELAIAQMKAGESVW-----FGSDVGQVSDRQKGIL 331 Query: 32 AVN 24 A N Sbjct: 332 ATN 334
>G6PI_PHOPR (Q6LM51) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 550 Score = 27.7 bits (60), Expect = 7.1 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Frame = +1 Query: 199 VTEAGIST-RLNQWWSSTPFITSGVTIICAAIYL-VCLLIGYDSYAEICFLPSAVASHF 369 V+E GI T + ++W G +C+AI L +CL IG+D++ E+ + HF Sbjct: 251 VSEFGIDTDNMFEFWDWV----GGRYSLCSAIGLSICLSIGFDNFVELLDGAHEMDQHF 305
>SPY4_HUMAN (Q9C004) Sprouty homolog 4 (Spry-4)| Length = 299 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -2 Query: 305 KHTRYIAAHIMVTPEVMNGVLLHHWFNLVEIPASVTMLGRISGAPQVL--VAPP 150 K TR A + TP + + HHW + P+SV+ S ++L +APP Sbjct: 65 KRTRGGAPELAPTPARCDQDVTHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPP 118
>MYCB2_HUMAN (O75592) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4641 Score = 27.3 bits (59), Expect = 9.2 Identities = 23/93 (24%), Positives = 35/93 (37%) Frame = +3 Query: 12 RAQVIYSNGTFLLLPEVAAGGPKTLEISPLCTPLHRYPNLQLSIPARRSHQHLRRARDAP 191 +A+V F + ++A GGP+ I LC H YP H+R+A Sbjct: 3177 KAEVRPRGNLFGEMAQLAVGGPEKDTICELCGESHPYP----------VTYHMRQAHPGC 3226 Query: 192 QHRHGGWDFN*VEPVVEQHTVHYFRRYHNMCGD 290 GG +N + H+ + CGD Sbjct: 3227 GRYAGGQGYNSIG--------HFCGGWAGNCGD 3251
>ARAB_SALTY (P06188) Ribulokinase (EC 2.7.1.16)| Length = 568 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = -2 Query: 311 INKHTRYIAAHIMVTPEVMNGVLLHHWFNLVEIPASVTMLG 189 IN+H RY T ++ G L W +++P SV + G Sbjct: 229 INRHLRYPLFSETFTADLPVGTLCAEWAQRLDLPESVVISG 269
>S5A2_MOUSE (Q99N99) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/53 (28%), Positives = 28/53 (52%) Frame = -2 Query: 305 KHTRYIAAHIMVTPEVMNGVLLHHWFNLVEIPASVTMLGRISGAPQVLVAPPG 147 KH+ +++ + + P + WF L E+P+ V +G ++ P+ L PPG Sbjct: 35 KHSESVSSGVPLLPARIA------WF-LQELPSFVVSVGMLAWQPRSLFGPPG 80
>MIS_RAT (P49000) Muellerian-inhibiting factor precursor (MIS)| (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting substance) Length = 553 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = -2 Query: 107 RAEWRDLEGFGAAGRDLG 54 RAEWR EG G AGR G Sbjct: 431 RAEWRGREGRGRAGRSKG 448
>FUMA_BACST (Q04718) Fumarate hydratase class I, aerobic (EC 4.2.1.2)| (Fumarase) Length = 514 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 92 DLEGFGAAGRDLGKKKKCAVAVNY 21 +LEG G AGRDL +KC + Y Sbjct: 157 ELEGLGRAGRDLDGIRKCILHAVY 180
>KLHL7_CHICK (Q5ZI33) Kelch-like protein 7| Length = 586 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +1 Query: 223 RLNQWWSSTPFITSGVTIICAAI-YLVCLLIGYDSYAEI 336 ++N+W +P GVT+ CAA+ +V +L G+ + Sbjct: 504 KMNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRL 542 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,996,141 Number of Sequences: 219361 Number of extensions: 1017890 Number of successful extensions: 3224 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3223 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
