Clone Name
bart50f06
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic prote...
668
0.0
2 gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic prote...
624
e-176
3 gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intr...
624
e-176
4 gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic prote...
622
e-175
5 dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clon...
507
e-141
6 dbj|AK104377.1| Oryza sativa (japonica cultivar-group) cDNA clon...
507
e-141
7 dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clon...
507
e-141
8 dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clon...
507
e-141
9 dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clon...
507
e-141
10 dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clon...
507
e-141
11 dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clon...
507
e-141
12 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
327
2e-86
13 dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic D...
327
2e-86
14 dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic D...
327
2e-86
15 dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clon...
218
1e-53
16 gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds
141
2e-30
17 gb|AF326503.1|AF326503 Zea mays tonoplast membrane integral prot...
141
2e-30
18 gb|AY106931.1| Zea mays PCO140073 mRNA sequence
141
2e-30
19 gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRN...
141
2e-30
20 gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic prote...
123
5e-25
21 ref|XM_473424.1| Oryza sativa (japonica cultivar-group), predic...
119
8e-24
22 emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4,...
119
8e-24
23 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
119
8e-24
24 ref|XM_467137.1| Oryza sativa (japonica cultivar-group), mRNA
107
3e-20
25 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
107
3e-20
26 dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic D...
107
3e-20
27 dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic D...
107
3e-20
28 dbj|AB114830.1| Oryza sativa (japonica cultivar-group) OsTIP2 mR...
107
3e-20
29 dbj|AK064728.1| Oryza sativa (japonica cultivar-group) cDNA clon...
107
3e-20
30 emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro...
107
3e-20
31 gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral prot...
103
5e-19
32 gb|AY105015.1| Zea mays PCO137646 mRNA sequence
103
5e-19
33 gb|DQ442393.1| Striga asiatica clone St461 aquaporin mRNA, parti...
101
2e-18
34 emb|AJ245953.1|SOL245953 Spinacia oleracea mRNA for delta tonopl...
98
3e-17
35 emb|AJ314583.1|POC314583 Posidonia oceanica mRNA for putative to...
96
1e-16
36 gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral prot...
92
2e-15
37 ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predic...
90
7e-15
38 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
90
7e-15
39 gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nippon...
90
7e-15
40 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
90
7e-15
41 gb|AF275315.1|AF275315 Lotus japonicus water-selective transport...
90
7e-15
42 dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, com...
90
7e-15
43 dbj|AK110727.1| Oryza sativa (japonica cultivar-group) cDNA clon...
90
7e-15
44 dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clon...
90
7e-15
45 dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clon...
90
7e-15
46 dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clon...
90
7e-15
47 dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clon...
90
7e-15
48 dbj|AP004479.1| Lotus japonicus genomic DNA, chromosome 1, clone...
90
7e-15
49 emb|X95650.1|TGTIP1GEN T.gesneriana mRNA for tonoplast intrinsic...
88
3e-14
50 gb|AY389618.1| Hyacinthus orientalis mitochondrial tonoplast int...
82
2e-12
51 gb|AF326500.1|AF326500 Zea mays tonoplast membrane integral prot...
82
2e-12
52 gb|AY112388.1| Zea mays CL24208_1 mRNA sequence
82
2e-12
53 emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative...
80
7e-12
54 gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intr...
78
3e-11
55 dbj|AB010416.1| Raphanus sativus VIP3 mRNA for delta-VM23, compl...
78
3e-11
56 gb|BT016509.1| Zea mays clone Contig342 mRNA sequence
76
1e-10
57 dbj|AB048248.1| Pyrus communis Py-gTIP mRNA for gamma tonoplast ...
76
1e-10
58 gb|BT016300.1| Zea mays clone Contig133 mRNA sequence
74
4e-10
59 emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
74
4e-10
60 gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, c...
74
4e-10
61 gb|AY104464.1| Zea mays PCO114899 mRNA sequence
74
4e-10
62 gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmT...
74
4e-10
63 emb|X95952.1|HAAP H.annuus mRNA for aquaporin
72
2e-09
64 gb|L12257.1|SOYNODA Glycine max nodulin-26 mRNA, complete cds
72
2e-09
65 emb|AJ289866.2|VVI289866 Vitis vinifera mRNA for putative aquapo...
68
3e-08
66 gb|AF271661.1|AF271661 Vitis berlandieri x Vitis rupestris putat...
68
3e-08
67 gb|AF326509.1|AF326509 Zea mays tonoplast membrane integral prot...
68
3e-08
68 dbj|AB211518.1| Lycopersicon esculentum mRNA for similar to aqua...
68
3e-08
69 dbj|AB126924.1| Prunus persica Pr-gTIP1 mRNA for tonoplast intri...
68
3e-08
70 gb|DQ202710.1| Olea europaea tonoplast intrinsic protein (tip) m...
68
3e-08
71 gb|AF047173.1| Vernicia fordii aquaporin mRNA, complete cds
66
1e-07
72 ref|NM_112495.2| Arabidopsis thaliana DELTA-TIP; water channel A...
62
2e-06
73 ref|NM_197137.1| Oryza sativa (japonica cultivar-group) putative...
62
2e-06
74 ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predic...
62
2e-06
75 gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno...
62
2e-06
76 emb|Y08962.1|OSTRAMBPR O.sativa mRNA for transmembrane protein
62
2e-06
77 emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intri...
62
2e-06
78 emb|AJ133748.1|PAB133748 Picea abies mRNA for major intrinsic pr...
62
2e-06
79 emb|AJ005078.2|PAAJ5078 Picea abies mRNA for aquaporin-like protein
62
2e-06
80 gb|U92651.2|BOU92651 Brassica oleracea var. botrytis tonoplast i...
62
2e-06
81 gb|AY081622.1| Arabidopsis thaliana delta tonoplast intrinsic pr...
62
2e-06
82 gb|AY065181.1| Arabidopsis thaliana delta tonoplast intrinsic pr...
62
2e-06
83 gb|U62778.1|GHU62778 Gossypium hirsutum delta-tonoplast intrinsi...
62
2e-06
84 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
62
2e-06
85 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
62
2e-06
86 gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein...
62
2e-06
87 emb|BX823177.1|CNS0A5ZD Arabidopsis thaliana Full-length cDNA Co...
62
2e-06
88 emb|BX823081.1|CNS0A5VY Arabidopsis thaliana Full-length cDNA Co...
62
2e-06
89 emb|BX823757.1|CNS0A5CX Arabidopsis thaliana Full-length cDNA Co...
62
2e-06
90 dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic D...
62
2e-06
91 gb|AY085921.1| Arabidopsis thaliana clone 19689 mRNA, complete s...
62
2e-06
92 dbj|AB023046.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
62
2e-06
93 dbj|AK111931.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
94 dbj|AK111768.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
95 dbj|AK111747.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
96 dbj|AB114829.1| Oryza sativa (japonica cultivar-group) OsTIP1 mR...
62
2e-06
97 dbj|AB114828.1| Oryza sativa (japonica cultivar-group) OsTIP3 mR...
62
2e-06
98 dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
99 dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
100 dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
101 dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
102 dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
103 gb|U39486.1|ATU39486 Arabidopsis thaliana delta tonoplast integr...
62
2e-06
104 gb|U39485.1|ATU39485 Arabidopsis thaliana delta tonoplast integr...
62
2e-06
105 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
62
2e-06
106 gb|U77297.1|OSU77297 Oryza sativa transmembrane protein mRNA, co...
62
2e-06
107 dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone...
62
2e-06
108 gb|DQ237285.1| Panax ginseng tonoplast intrinsic protein (TIP1) ...
60
6e-06
109 gb|AY639596.1| Salicornia herbacea tonoplast intrinsic protein g...
60
6e-06
110 gb|AY130971.1| Brassica oleracea var. botrytis tonoplast intrins...
60
6e-06
111 gb|AF290619.1|AF290619 Nicotiana glauca putative gamma TIP (MIP3...
60
6e-06
112 gb|AF118381.1|AF118381 Brassica napus tonoplast intrinsic protei...
60
6e-06
113 ref|XM_429115.1| PREDICTED: Gallus gallus similar to aquaporin 5...
58
3e-05
114 ref|XM_428856.1| PREDICTED: Gallus gallus similar to Aquaporin 5...
58
3e-05
115 emb|X95950.1|HAST7 H.annuus mRNA for aquaporin, clone SunTIP7
58
3e-05
116 gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP)...
56
1e-04
117 ref|NM_113559.3| Arabidopsis thaliana TIP2 (TONOPLAST INTRINSIC ...
54
4e-04
118 ref|NM_188624.1| Oryza sativa (japonica cultivar-group), Ozsa822...
54
4e-04
119 ref|XM_473480.1| Oryza sativa (japonica cultivar-group), predic...
54
4e-04
120 emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4,...
54
4e-04
121 emb|AJ243309.1|PSA243309 Pisum sativum mRNA for putative tonopla...
54
4e-04
122 gb|AY079114.1| Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, comp...
54
4e-04
123 gb|AF419613.1|AF419613 Arabidopsis thaliana AT3g26520/MFE16_3 mR...
54
4e-04
124 gb|AF428341.1|AF428341 Arabidopsis thaliana AT3g26520/MFE16_3 mR...
54
4e-04
125 gb|AF004393.1|AF004393 Arabidopsis thaliana salt-stress induced ...
54
4e-04
126 gb|AF342809.1|AF342809 Zea mays tonoplast membrane integral prot...
54
4e-04
127 gb|AF326508.1|AF326508 Zea mays tonoplast membrane integral prot...
54
4e-04
128 gb|AF326504.1|AF326504 Zea mays tonoplast membrane integral prot...
54
4e-04
129 emb|BX822807.1|CNS0A75T Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
130 emb|BX822624.1|CNS0A742 Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
131 emb|BX825064.1|CNS0A6TA Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
132 emb|BX824373.1|CNS0A6WG Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
133 emb|BX824073.1|CNS0A6T2 Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
134 emb|BX822975.1|CNS0A733 Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
135 emb|BX824311.1|CNS0A6PE Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
136 emb|BX823637.1|CNS0A6I3 Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
137 emb|BX823607.1|CNS0A6MK Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
138 emb|BX822968.1|CNS0A5UC Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
139 emb|BX842163.1|CNS09YDT Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
140 emb|BX842138.1|CNS09YDN Arabidopsis thaliana Full-length cDNA Co...
54
4e-04
141 gb|AF133531.1|AF133531 Mesembryanthemum crystallinum water chann...
54
4e-04
142 gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrins...
54
4e-04
143 dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
54
4e-04
144 gb|AF057137.1|AF057137 Arabidopsis thaliana gamma tonoplast intr...
54
4e-04
145 ref|XM_473420.1| Oryza sativa (japonica cultivar-group), predic...
52
0.002
146 gb|DQ226889.1| Boechera divaricarpa isolate SLW-D-E07 mRNA sequence
52
0.002
147 gb|AF133532.1|AF133532 Mesembryanthemum crystallinum water chann...
52
0.002
148 dbj|AK070602.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.002
149 dbj|D45077.1|CUCMP23A Cucurbita cv. Kurokawa Amakuri mRNA for MP...
52
0.002
150 dbj|D84669.1| Raphanus sativus mRNA for VM23, complete sequence
52
0.002
151 gb|U92652.2|BOU92652 Brassica oleracea var. botrytis tonoplast i...
50
0.006
152 dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.006
153 gb|U43291.1|MCU43291 Mesembryanthemum crystallinum tonoplast int...
50
0.006
154 ref|NM_129238.2| Arabidopsis thaliana GAMMA-TIP; water channel A...
48
0.024
155 emb|X72581.1|ATGTIPMR A.thaliana mRNA for tonoplast intrinsic pr...
48
0.024
156 emb|X63552.1|ATGTIPARA A.thaliana gene for tonoplast intrinsic p...
48
0.024
157 gb|AY059134.1| Arabidopsis thaliana putative aquaporin (At2g3683...
48
0.024
158 gb|AF370172.1| Arabidopsis thaliana putative tonoplast intrinsic...
48
0.024
159 emb|X54854.1|ATROOTSP A. thaliana mRNA for root-specific gene
48
0.024
160 gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map ...
48
0.024
161 emb|BX819301.1|CNS0AA93 Arabidopsis thaliana Full-length cDNA Co...
48
0.024
162 emb|BX819066.1|CNS0AA99 Arabidopsis thaliana Full-length cDNA Co...
48
0.024
163 emb|BX818765.1|CNS0AA8G Arabidopsis thaliana Full-length cDNA Co...
48
0.024
164 emb|BX819619.1|CNS0A8TV Arabidopsis thaliana Full-length cDNA Co...
48
0.024
165 emb|BX819585.1|CNS0A8ZS Arabidopsis thaliana Full-length cDNA Co...
48
0.024
166 emb|BX819242.1|CNS0A8YI Arabidopsis thaliana Full-length cDNA Co...
48
0.024
167 emb|BX818836.1|CNS0A8V6 Arabidopsis thaliana Full-length cDNA Co...
48
0.024
168 emb|BX818785.1|CNS0A8WQ Arabidopsis thaliana Full-length cDNA Co...
48
0.024
169 emb|BX820166.1|CNS0A8IR Arabidopsis thaliana Full-length cDNA Co...
48
0.024
170 gb|AY087558.1| Arabidopsis thaliana clone 36633 mRNA, complete s...
48
0.024
171 gb|AF133533.1|AF133533 Mesembryanthemum crystallinum water chann...
48
0.024
172 gb|M84344.1|ATHGTIP Arabidopsis thaliana tonoplast intrinsic pro...
48
0.024
173 gb|BT016583.1| Zea mays clone Contig416 mRNA sequence
46
0.096
174 gb|AY243801.1| Zea mays aquaporin (PIP2-1) mRNA, complete cds
46
0.096
175 emb|AJ843991.1| Plantago major partial mRNA for aquaporin 1 (aqp...
46
0.096
176 gb|AF326507.1|AF326507 Zea mays tonoplast membrane integral prot...
46
0.096
177 gb|AF326492.1|AF326492 Zea mays plasma membrane integral protein...
46
0.096
178 gb|AF326491.1|AF326491 Zea mays plasma membrane integral protein...
46
0.096
179 gb|AF139816.1|AF139816 Triticum aestivum plasma membrane intrins...
46
0.096
180 dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.096
181 dbj|AK112022.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.096
182 dbj|AK111839.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.096
183 dbj|AK104037.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.096
184 dbj|AK072966.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.096
185 dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds
46
0.096
186 gb|AF020793.1|AF020793 Medicago sativa tonoplast intrinsic prote...
46
0.096
187 gb|L36881.1|ALFMCP Medicago sativa membrane channel protein mRNA...
46
0.096
188 gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, com...
46
0.096
189 ref|NM_187411.1| Oryza sativa (japonica cultivar-group), mRNA
44
0.38
190 gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq...
44
0.38
191 emb|Y08161.1|NTAQP1 N.tabacum mRNA for aquaporin 1
44
0.38
192 dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl...
44
0.38
193 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
44
0.38
194 ref|NM_001009273.1| Ovis aries aquaporin 5 (AQP5), mRNA
44
0.38
195 gb|AY177613.1| Ovis aries aquaporin 5 (AQP5) mRNA, complete cds
44
0.38
196 dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D...
44
0.38
197 ref|XM_844922.1| PREDICTED: Canis familiaris hypothetical protei...
42
1.5
198 emb|AL139092.12| Human DNA sequence from clone RP11-420G6 on chr...
42
1.5
199 emb|Y10637.1|DNAQP2X1 D.novemcinctus aqp2 gene, exon 1, partial
42
1.5
200 emb|BX294146.1| Pirellula sp. strain 1 complete genome; segment ...
42
1.5
201 emb|AJ289696.1|POC289696 Posidonia oceanica partial mRNA for put...
42
1.5
202 emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid r...
42
1.5
203 gb|AY103628.1| Zea mays PCO109231 mRNA sequence
42
1.5
204 gb|AY378170.1| Cichorium intybus aquaporine-like mRNA, partial s...
40
5.9
205 ref|NM_117838.2| Arabidopsis thaliana DELTA-TIP2/TIP2;2; water c...
40
5.9
206 gb|AE010414.1| Methanopyrus kandleri AV19 section 113 of 157 of ...
40
5.9
207 gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
40
5.9
208 ref|XM_476391.1| Oryza sativa (japonica cultivar-group), mRNA
40
5.9
209 ref|NM_012779.1| Rattus norvegicus aquaporin 5 (Aqp5), mRNA
40
5.9
210 gb|BT019863.1| Synthetic construct Homo sapiens aquaporin 5 mRNA...
40
5.9
211 gb|BC078904.1| Rattus norvegicus aquaporin 5, mRNA (cDNA clone I...
40
5.9
212 ref|NM_001651.1| Homo sapiens aquaporin 5 (AQP5), mRNA
40
5.9
213 gb|DQ164589.1| Hepatitis C virus isolate BE00-17-3630 polyprotei...
40
5.9
214 gb|DQ164581.1| Hepatitis C virus isolate BE01-17-3630 polyprotei...
40
5.9
215 gb|BC034356.1| Homo sapiens aquaporin 5, mRNA (cDNA clone IMAGE:...
40
5.9
216 ref|XM_001003734.1| PREDICTED: Mus musculus aquaporin 5 (Aqp5), ...
40
5.9
217 gb|AY243802.1| Zea mays aquaporin (PIP2-5) mRNA, complete cds
40
5.9
218 emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ...
40
5.9
219 ref|XM_743501.1| Aspergillus fumigatus Af293 MFS transporter (Af...
40
5.9
220 gb|AC126688.4| Mus musculus BAC clone RP23-152P20 from chromosom...
40
5.9
221 emb|CR688490.2|CNS0FU6U Tetraodon nigroviridis full-length cDNA
40
5.9
222 emb|CR690005.1|CNS0FVCX Tetraodon nigroviridis full-length cDNA
40
5.9
223 gb|AC144721.18| Medicago truncatula clone mth2-11o23, complete s...
40
5.9
224 ref|NM_009701.3| Mus musculus aquaporin 5 (Aqp5), mRNA
40
5.9
225 emb|Z98742.5|HS128O3 Human DNA sequence from clone RP1-128O3 on ...
40
5.9
226 gb|CP000316.1| Polaromonas sp. JS666, complete genome
40
5.9
227 emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA ...
40
5.9
228 emb|Z29946.1|TRGTIPLP T.repens (Huia) mRNA for gamma-Tip-like pr...
40
5.9
229 emb|X95951.1|HAST18 H.annuus mRNA for aquaporin, clone SunTIP18
40
5.9
230 emb|X77957.1|CVCIC C.viridis mRNA for CIC
40
5.9
231 emb|CR555306.1| Azoarcus sp. EbN1 complete genome
40
5.9
232 gb|BC032946.1| Homo sapiens aquaporin 5, mRNA (cDNA clone MGC:33...
40
5.9
233 emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, ...
40
5.9
234 gb|AC104024.8| Homo sapiens chromosome 17, clone RP11-416I2, com...
40
5.9
235 gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, comp...
40
5.9
236 gb|AC079111.7| Homo sapiens chromosome 17, clone RP11-367G9, com...
40
5.9
237 emb|AJ829443.3| Gallus gallus partial aquaporin 5 homologue (AQP...
40
5.9
238 gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
40
5.9
239 dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c...
40
5.9
240 emb|CR625526.1| full-length cDNA clone CS0DI081YK01 of Placenta ...
40
5.9
241 emb|CR601707.1| full-length cDNA clone CS0DF008YG01 of Fetal bra...
40
5.9
242 gb|AE012337.1| Xanthomonas campestris pv. campestris str. ATCC 3...
40
5.9
243 gb|CP000133.1| Rhizobium etli CFN 42, complete genome
40
5.9
244 gb|AC157522.2| Pan troglodytes BAC clone CH251-520I13 from chrom...
40
5.9
245 emb|CR542022.1| Homo sapiens full open reading frame cDNA clone ...
40
5.9
246 emb|CR541989.1| Homo sapiens full open reading frame cDNA clone ...
40
5.9
247 gb|AY056063.1| Arabidopsis thaliana AT4g17340/dl4705w mRNA, comp...
40
5.9
248 dbj|AK009302.1| Mus musculus adult male tongue cDNA, RIKEN full-...
40
5.9
249 gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ...
40
5.9
250 gb|AF367283.1|AF367283 Arabidopsis thaliana AT4g17340/dl4705w mR...
40
5.9
251 dbj|AK004736.1| Mus musculus adult male lung cDNA, RIKEN full-le...
40
5.9
252 gb|AC160656.3| Pan troglodytes BAC clone CH251-1C6 from chromoso...
40
5.9
253 gb|AF130975.1|AF130975 Zea mays plasma membrane intrinsic protei...
40
5.9
254 emb|BX825196.1|CNS0A4OU Arabidopsis thaliana Full-length cDNA Co...
40
5.9
255 emb|BX828364.1|CNS0A340 Arabidopsis thaliana Full-length cDNA Co...
40
5.9
256 gb|AC126352.6| Homo sapiens chromosome 17, clone CTD-2509K7, com...
40
5.9
257 gb|AC025154.31| Homo sapiens 12 BAC RP11-469H8 (Roswell Park Can...
40
5.9
258 dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...
40
5.9
259 gb|AC022596.9|AC022596 Homo sapiens chromosome 17, clone RP11-21...
40
5.9
260 gb|AY088929.1| Arabidopsis thaliana clone 99796 mRNA, complete s...
40
5.9
261 gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
40
5.9
262 gb|BC092572.1| Rattus norvegicus cDNA clone IMAGE:7122974, parti...
40
5.9
263 dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ...
40
5.9
264 dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D...
40
5.9
265 dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic D...
40
5.9
266 dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic D...
40
5.9
267 gb|AY890983.1| Synthetic construct Homo sapiens clone FLH008137....
40
5.9
268 dbj|AK109604.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
5.9
269 gb|AY894080.1| Synthetic construct Homo sapiens clone FLH131269....
40
5.9
270 gb|AY893281.1| Synthetic construct Homo sapiens clone FLH131264....
40
5.9
271 dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic D...
40
5.9
272 gb|AF087654.1|AF087654 Mus musculus aquaporin 5 (Aqp5) mRNA, com...
40
5.9
273 gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete...
40
5.9
274 emb|AL732467.8| Mouse DNA sequence from clone RP23-147L14 on chr...
40
5.9
275 gb|U46566.1|HSAQP501 Human aquaporin-5 (AQP5) gene, exon 1
40
5.9
276 gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, comple...
40
5.9
277 gb|U16245.1|RNU16245 Rattus norvegicus aquaporin-5 (AQP5) mRNA, ...
40
5.9
278 emb|AL353996.3|HS48J14 Homo sapiens chromosome 17 sequence from ...
40
5.9
279 gb|BC110045.1| Rattus norvegicus aquaporin 5, mRNA (cDNA clone M...
40
5.9
>gb| AY525640.1 | Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA,
complete cds
Length = 853
Score = 668 bits (337), Expect = 0.0
Identities = 400/421 (95%)
Strand = Plus / Plus
Query: 20 ctctcatcctcccagcttggttttccggccattctagccaccatgccaggctccatcgcc 79
||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||
Sbjct: 13 ctctcatcctcccagttctgttcctcggccattctagccaccatgccgggctccatcgcc 72
Query: 80 tttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgagttc 139
|| |||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||
Sbjct: 73 ttcggtcgcttcgatgactccttcagcttggcctctttcaaggcctacatcgctgagttc 132
Query: 140 atctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacaccaaggtg 199
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 133 atctccaccctcatcttcgtcttcgccggcgtcggctctgccatcgcctacactaaggtg 192
Query: 200 agcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgccacgggttc 259
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 193 agcggcggcgcgccccttgacccatccgggctgattgccgtggcgatatgccacgggttc 252
Query: 260 gggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgcc 319
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gggctgttcgtcgcggtcgccatcggcgccaacatctccggcggccacgtgaaccctgcc 312
Query: 320 gtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctcttctactgg 379
||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||| |||
Sbjct: 313 gtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcatcttctattgg 372
Query: 380 gttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcaccggcgtg 439
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gttgcccagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcaccggcgtg 432
Query: 440 g 440
|
Sbjct: 433 g 433
>gb| AY525639.1 | Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA,
complete cds
Length = 817
Score = 624 bits (315), Expect = e-176
Identities = 399/423 (94%), Gaps = 3/423 (0%)
Strand = Plus / Plus
Query: 20 ctctcatcctcccagcttggttttc-cggccattcta-gccaccatgccaggctccatcg 77
|||||||||||||| ||| ||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 13 ctctcatcctccca-cttccttttctcggccattctaagccaccatgccgggctccatcg 71
Query: 78 cctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgagt 137
|||| |||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||
Sbjct: 72 ccttcggtcgcttcgatgactccttcagcttggcctctttcagggcctacatcgccgagt 131
Query: 138 tcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacaccaagg 197
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 132 tcatctccaccctcatcttcgtcttcgccggcgtcggctctgtcatcgcctacaccaagg 191
Query: 198 tgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgccacgggt 257
|||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 192 tgagcggcggcgcgccgcttgacccatccgggctgatcgccgtggcgatttgccacgggt 251
Query: 258 tcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctg 317
| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 252 ttgggctgttcgtcgcggtcgccatcggcgccaacatctccggcggccatgtgaaccctg 311
Query: 318 ccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctcttctact 377
||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||
Sbjct: 312 ccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcatcttctact 371
Query: 378 gggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcaccggcg 437
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gggttgcccagctcctcggcgccatcgtcggcgccttcctcgtccagttctgcaccggcg 431
Query: 438 tgg 440
|||
Sbjct: 432 tgg 434
>gb| U86763.1 |TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA,
complete cds
Length = 1067
Score = 624 bits (315), Expect = e-176
Identities = 399/423 (94%), Gaps = 3/423 (0%)
Strand = Plus / Plus
Query: 20 ctctcatcctcccagcttggttttc-cggccattcta-gccaccatgccaggctccatcg 77
|||||||||||||| ||| ||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 15 ctctcatcctccca-cttccttttctcggccattctaagccaccatgccgggctccatcg 73
Query: 78 cctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgagt 137
|||| |||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||
Sbjct: 74 ccttcggtcgcttcgatgactccttcagcttggcctctttcagggcctacatcgccgagt 133
Query: 138 tcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacaccaagg 197
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 134 tcatctccaccctcatcttcgtcttcgccggcgtcggctctgtcatcgcctacaccaagg 193
Query: 198 tgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgccacgggt 257
|||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 194 tgagcggcggcgcgccgcttgacccatccgggctgatcgccgtggcgatttgccacgggt 253
Query: 258 tcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctg 317
| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 254 ttgggctgttcgtcgcggtcgccatcggcgccaacatctccggcggccatgtgaaccctg 313
Query: 318 ccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctcttctact 377
||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||
Sbjct: 314 ccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcatcttctact 373
Query: 378 gggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcaccggcg 437
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gggttgcccagctcctcggcgccatcgtcggcgccttcctcgtccagttctgcaccggcg 433
Query: 438 tgg 440
|||
Sbjct: 434 tgg 436
>gb| AY525641.1 | Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA,
complete cds
Length = 829
Score = 622 bits (314), Expect = e-175
Identities = 397/422 (94%), Gaps = 2/422 (0%)
Strand = Plus / Plus
Query: 21 tctcatcctccc-agcttggttttccggccattcta-gccaccatgccaggctccatcgc 78
|||||||||||| |||| |||||| |||||||||| ||||||||||| | |||||||||
Sbjct: 9 tctcatcctccccagctcggtttttgggccattctaagccaccatgcctgcctccatcgc 68
Query: 79 ctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgagtt 138
||| ||||| |||||||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 69 cttcggtcggttcgatgactccttcagcttggcctctttcaaggcctacatcgccgagtt 128
Query: 139 catctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacaccaaggt 198
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 129 catctccaccctcatcttcgtcttcgccggcgtcggctctgccatcgcctactccaaggt 188
Query: 199 gagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgccacgggtt 258
||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 189 gagcggcggcgcgccgcttgacccatccgggctgatcgccgtggccatctgccacgggtt 248
Query: 259 cgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgc 318
|||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 249 cgggctgttcgtcgcggtcgccgtcggcgccaacatctccggcggccatgtgaaccctgc 308
Query: 319 cgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctcttctactg 378
|||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 309 cgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcatcttctactg 368
Query: 379 ggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcaccggcgt 438
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggttgcccagctcctcggcgccatcgtcggcgccttcctcgtccagttctgcaccggcgt 428
Query: 439 gg 440
||
Sbjct: 429 gg 430
>dbj| AK104464.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full
insert sequence
Length = 1194
Score = 507 bits (256), Expect = e-141
Identities = 340/368 (92%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 101 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 160
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacac 192
||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 161 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctacac 220
Query: 193 caaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcca 252
|||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | |||||
Sbjct: 221 caagttgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcca 280
Query: 253 cgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaa 312
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 281 cgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtcaa 340
Query: 313 ccctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctctt 372
||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 341 cccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtctt 400
Query: 373 ctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcac 432
||||||| | || ||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 401 ctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgcac 460
Query: 433 cggcgtgg 440
||||||||
Sbjct: 461 cggcgtgg 468
>dbj| AK104377.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G09, full
insert sequence
Length = 1196
Score = 507 bits (256), Expect = e-141
Identities = 340/368 (92%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 103 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 162
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacac 192
||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 163 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctacac 222
Query: 193 caaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcca 252
|||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | |||||
Sbjct: 223 caagttgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcca 282
Query: 253 cgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaa 312
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 283 cgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtcaa 342
Query: 313 ccctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctctt 372
||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 343 cccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtctt 402
Query: 373 ctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcac 432
||||||| | || ||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 403 ctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgcac 462
Query: 433 cggcgtgg 440
||||||||
Sbjct: 463 cggcgtgg 470
>dbj| AK104270.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full
insert sequence
Length = 1214
Score = 507 bits (256), Expect = e-141
Identities = 340/368 (92%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 103 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 162
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacac 192
||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 163 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctacac 222
Query: 193 caaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcca 252
|||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | |||||
Sbjct: 223 caagttgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcca 282
Query: 253 cgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaa 312
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 283 cgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtcaa 342
Query: 313 ccctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctctt 372
||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 343 cccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtctt 402
Query: 373 ctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcac 432
||||||| | || ||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 403 ctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgcac 462
Query: 433 cggcgtgg 440
||||||||
Sbjct: 463 cggcgtgg 470
>dbj| AK099616.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full
insert sequence
Length = 1197
Score = 507 bits (256), Expect = e-141
Identities = 340/368 (92%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 104 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 163
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacac 192
||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 164 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctacac 223
Query: 193 caaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcca 252
|||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | |||||
Sbjct: 224 caagttgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcca 283
Query: 253 cgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaa 312
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 284 cgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtcaa 343
Query: 313 ccctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctctt 372
||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 344 cccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtctt 403
Query: 373 ctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcac 432
||||||| | || ||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 404 ctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgcac 463
Query: 433 cggcgtgg 440
||||||||
Sbjct: 464 cggcgtgg 471
>dbj| AK099141.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full
insert sequence
Length = 1195
Score = 507 bits (256), Expect = e-141
Identities = 340/368 (92%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 102 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 161
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacac 192
||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 162 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctacac 221
Query: 193 caaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcca 252
|||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | |||||
Sbjct: 222 caagttgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcca 281
Query: 253 cgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaa 312
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 282 cgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtcaa 341
Query: 313 ccctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctctt 372
||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 342 cccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtctt 401
Query: 373 ctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcac 432
||||||| | || ||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 402 ctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgcac 461
Query: 433 cggcgtgg 440
||||||||
Sbjct: 462 cggcgtgg 469
>dbj| AK099015.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full
insert sequence
Length = 1202
Score = 507 bits (256), Expect = e-141
Identities = 340/368 (92%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 104 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 163
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacac 192
||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 164 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctacac 223
Query: 193 caaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcca 252
|||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | |||||
Sbjct: 224 caagctgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcca 283
Query: 253 cgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaa 312
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 284 cgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtcaa 343
Query: 313 ccctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctctt 372
||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 344 cccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtctt 403
Query: 373 ctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcac 432
||||||| | || ||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 404 ctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgcac 463
Query: 433 cggcgtgg 440
||||||||
Sbjct: 464 cggcgtgg 471
>dbj| AK073531.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full
insert sequence
Length = 1220
Score = 507 bits (256), Expect = e-141
Identities = 340/368 (92%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 102 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 161
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacac 192
||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 162 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctacac 221
Query: 193 caaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcca 252
|||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | |||||
Sbjct: 222 caagttgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcca 281
Query: 253 cgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaa 312
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 282 cgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtcaa 341
Query: 313 ccctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctctt 372
||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 342 cccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtctt 401
Query: 373 ctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgcac 432
||||||| | || ||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 402 ctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgcac 461
Query: 433 cggcgtgg 440
||||||||
Sbjct: 462 cggcgtgg 469
>dbj| AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 327 bits (165), Expect = 2e-86
Identities = 228/249 (91%)
Strand = Plus / Plus
Query: 192 ccaaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcc 251
||||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | ||||
Sbjct: 13250418 ccaagttgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcc 13250477
Query: 252 acgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtga 311
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
Sbjct: 13250478 acgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtca 13250537
Query: 312 accctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctct 371
|||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||
Sbjct: 13250538 acccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtct 13250597
Query: 372 tctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgca 431
|||||||| | || ||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 13250598 tctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgca 13250657
Query: 432 ccggcgtgg 440
|||||||||
Sbjct: 13250658 ccggcgtgg 13250666
Score = 180 bits (91), Expect = 3e-42
Identities = 112/119 (94%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 13250218 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 13250277
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctaca 191
||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||
Sbjct: 13250278 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctaca 13250336
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 291 acatctccggcggccacgtgaaccctgccgtcacc 325
|||||||||||| |||| ||||||| |||||||||
Sbjct: 6663185 acatctccggcgcccacatgaacccggccgtcacc 6663151
>dbj| AP005449.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0427E01
Length = 146395
Score = 327 bits (165), Expect = 2e-86
Identities = 228/249 (91%)
Strand = Plus / Plus
Query: 192 ccaaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcc 251
||||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | ||||
Sbjct: 12228 ccaagttgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcc 12287
Query: 252 acgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtga 311
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
Sbjct: 12288 acgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtca 12347
Query: 312 accctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctct 371
|||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||
Sbjct: 12348 acccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtct 12407
Query: 372 tctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgca 431
|||||||| | || ||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 12408 tctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgca 12467
Query: 432 ccggcgtgg 440
|||||||||
Sbjct: 12468 ccggcgtgg 12476
Score = 180 bits (91), Expect = 3e-42
Identities = 112/119 (94%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 12028 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 12087
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctaca 191
||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||
Sbjct: 12088 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctaca 12146
>dbj| AP004784.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0012F14
Length = 168629
Score = 327 bits (165), Expect = 2e-86
Identities = 228/249 (91%)
Strand = Plus / Plus
Query: 192 ccaaggtgagcggcggcgcgccccttgacccatccgggctgattgccgtggcgatctgcc 251
||||| ||| |||||||||||| |||||||| |||||||| | ||||||||| | ||||
Sbjct: 167606 ccaagttgaccggcggcgcgccgcttgacccggccgggctggtcgccgtggcggtgtgcc 167665
Query: 252 acgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtga 311
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
Sbjct: 167666 acgggttcgggctgttcgtggcggtggccatcggcgccaacatctccggcggccacgtca 167725
Query: 312 accctgccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctct 371
|||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||
Sbjct: 167726 acccggccgtcaccttcggcctcgccctcggcggccagatcaccatcctcaccggcgtct 167785
Query: 372 tctactgggttgcgcagctcctcggtgccatcgtcggcgccttcctcgtccagttctgca 431
|||||||| | || ||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 167786 tctactggatcgcccagctcctcggcgccatcgtcggcgccgtcctcgtccagttctgca 167845
Query: 432 ccggcgtgg 440
|||||||||
Sbjct: 167846 ccggcgtgg 167854
Score = 180 bits (91), Expect = 3e-42
Identities = 112/119 (94%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 167406 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 167465
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctaca 191
||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||
Sbjct: 167466 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctaca 167524
>dbj| AK100193.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full
insert sequence
Length = 1074
Score = 218 bits (110), Expect = 1e-53
Identities = 140/150 (93%)
Strand = Plus / Plus
Query: 73 catcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgc 132
||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 102 catcgccttcggccgcttcgatgactccttcagcgcggcctccctcaaggcctacgtcgc 161
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacac 192
||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 162 cgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcctacac 221
Query: 193 caaggtgagcggcggcgcgccccttgaccc 222
|||| ||| |||||||||||| ||||||||
Sbjct: 222 caagttgaccggcggcgcgccgcttgaccc 251
Score = 139 bits (70), Expect = 9e-30
Identities = 88/94 (93%)
Strand = Plus / Plus
Query: 347 cagatcaccatcctcaccggcctcttctactgggttgcgcagctcctcggtgccatcgtc 406
||||||||||||||||||||| ||||||||||| | || ||||||||||| |||||||||
Sbjct: 255 cagatcaccatcctcaccggcgtcttctactggatcgcccagctcctcggcgccatcgtc 314
Query: 407 ggcgccttcctcgtccagttctgcaccggcgtgg 440
|||||| |||||||||||||||||||||||||||
Sbjct: 315 ggcgccgtcctcgtccagttctgcaccggcgtgg 348
>gb| AY243804.1 | Zea mays tonoplast water channel mRNA, complete cds
Length = 968
Score = 141 bits (71), Expect = 2e-30
Identities = 101/111 (90%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||
Sbjct: 225 cgccaacatctccggcggccacctgaaccccgccgtcaccttcggcctcgccgtcggcgg 284
Query: 346 tcagatcaccatcctcaccggcctcttctactgggttgcgcagctcctcgg 396
|| |||||||||||||||||| || ||||||||||||| ||||| |||||
Sbjct: 285 ccacatcaccatcctcaccggcatcctctactgggttgcccagcttctcgg 335
Score = 77.8 bits (39), Expect = 3e-11
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 116 ctcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggc 175
||||||||||| || |||||||||||| |||| || ||||||| ||||||||||||||
Sbjct: 55 ctcaaggcctatgtggccgagttcatcgccacgctgctcttcgtgttcgccggcgtcggg 114
Query: 176 tctgccattgcctac 190
|| ||||||||||||
Sbjct: 115 tccgccattgcctac 129
>gb| AF326503.1 |AF326503 Zea mays tonoplast membrane integral protein ZmTIP2-3 mRNA,
complete cds
Length = 1042
Score = 141 bits (71), Expect = 2e-30
Identities = 101/111 (90%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||
Sbjct: 293 cgccaacatctccggcggccacctgaaccccgccgtcaccttcggcctcgccgtcggcgg 352
Query: 346 tcagatcaccatcctcaccggcctcttctactgggttgcgcagctcctcgg 396
|| |||||||||||||||||| || ||||||||||||| ||||| |||||
Sbjct: 353 ccacatcaccatcctcaccggcatcctctactgggttgcccagcttctcgg 403
Score = 69.9 bits (35), Expect = 7e-09
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 116 ctcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggc 175
||||||||||| || ||||||||||| |||| || ||||||| ||||||||||||||
Sbjct: 123 ctcaaggcctatgtggccgagttcattgccacgctgctcttcgtgttcgccggcgtcggg 182
Query: 176 tctgccattgcctac 190
|| ||||||||||||
Sbjct: 183 tccgccattgcctac 197
>gb| AY106931.1 | Zea mays PCO140073 mRNA sequence
Length = 1069
Score = 141 bits (71), Expect = 2e-30
Identities = 101/111 (90%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||
Sbjct: 302 cgccaacatctccggcggccacctgaaccccgccgtcaccttcggcctcgccgtcggcgg 361
Query: 346 tcagatcaccatcctcaccggcctcttctactgggttgcgcagctcctcgg 396
|| |||||||||||||||||| || ||||||||||||| ||||| |||||
Sbjct: 362 ccacatcaccatcctcaccggcatcctctactgggttgcccagcttctcgg 412
Score = 77.8 bits (39), Expect = 3e-11
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 116 ctcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggc 175
||||||||||| || |||||||||||| |||| || ||||||| ||||||||||||||
Sbjct: 132 ctcaaggcctatgtggccgagttcatcgccacgctgctcttcgtgttcgccggcgtcggg 191
Query: 176 tctgccattgcctac 190
|| ||||||||||||
Sbjct: 192 tccgccattgcctac 206
>gb| AF057183.1 |AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds
Length = 1060
Score = 141 bits (71), Expect = 2e-30
Identities = 101/111 (90%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||
Sbjct: 284 cgccaacatctccggcggccacctgaaccccgccgtcaccttcggcctcgccgtcggcgg 343
Query: 346 tcagatcaccatcctcaccggcctcttctactgggttgcgcagctcctcgg 396
|| |||||||||||||||||| || ||||||||||||| ||||| |||||
Sbjct: 344 ccacatcaccatcctcaccggcatcctctactgggttgcccagcttctcgg 394
Score = 77.8 bits (39), Expect = 3e-11
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 116 ctcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggc 175
||||||||||| || |||||||||||| |||| || ||||||| ||||||||||||||
Sbjct: 114 ctcaaggcctatgtggccgagttcatcgccacgctgctcttcgtgttcgccggcgtcggg 173
Query: 176 tctgccattgcctac 190
|| ||||||||||||
Sbjct: 174 tccgccattgcctac 188
>gb| AF254799.1 |AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
complete cds
Length = 65979
Score = 123 bits (62), Expect = 5e-25
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcggt 346
||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||
Sbjct: 44328 gccaacatctccggcggccacctgaaccccgccgtcacgttcggcctcgccgtcggcggc 44387
Query: 347 cagatcaccatcctcaccggcctcttctactgggttgcgcagctcctcgg 396
|| |||||||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 44388 cacgtcaccatcctcaccgggctcttctactgggtcgcccagctgctcgg 44437
Score = 71.9 bits (36), Expect = 2e-09
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 123 cctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgcca 182
|||| ||||| ||||||||| |||||||| ||||||| |||||||||||||| || ||||
Sbjct: 44078 cctatgtcgcggagttcatcgccaccctcctcttcgtgttcgccggcgtcgggtccgcca 44137
Query: 183 ttgcctac 190
|| |||||
Sbjct: 44138 tttcctac 44145
Score = 65.9 bits (33), Expect = 1e-07
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 123 cctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgcca 182
||||| |||||||||||||||||||| || ||||||| ||| ||| ||||||||| ||||
Sbjct: 45423 cctacttcgccgagttcatctccaccttcctcttcgtgttcaccgccgtcggctccgcca 45482
Query: 183 t 183
|
Sbjct: 45483 t 45483
Score = 60.0 bits (30), Expect = 6e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 256 gttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccc 315
||||||||| |||| |||||| ||||| |||| || |||||||||||||||| |||||
Sbjct: 45664 gttcgggctcttcgccgcggtgttcatcgccgccgacgtctccggcggccacgtcaaccc 45723
Query: 316 tgccgtcaccttcg 329
|||||||| ||||
Sbjct: 45724 ggccgtcacgttcg 45737
>ref| XM_473424.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2307
Score = 119 bits (60), Expect = 8e-24
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 257 ttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccct 316
|||| ||||||||||| ||| |||| | ||||||||||||||| |||||| |||||||
Sbjct: 193 ttcgcgctgttcgtcggagtttccatggccgccaacatctccggtggccacttgaacccc 252
Query: 317 gccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctcttctac 376
| ||||||||||||||||| |||| || || |||||||||||||||||| ||||||||
Sbjct: 253 gttgtcaccttcggcctcgccgtcggtggccacatcaccatcctcaccggcatcttctac 312
Query: 377 tgggttgcgcagctcctcgg 396
||||| || ||||| |||||
Sbjct: 313 tgggtcgctcagctgctcgg 332
Score = 75.8 bits (38), Expect = 1e-10
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 117 tcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggct 176
|||||||||| ||||| |||||||| |||| ||| |||| || ||||||||||||||||
Sbjct: 53 tcaaggcctatgtcgcggagttcattgccacactcctctttgtgttcgccggcgtcggct 112
Query: 177 ctgccattgcctac 190
| ||||||||||||
Sbjct: 113 ccgccattgcctac 126
>emb| AL663000.4 |OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17,
complete sequence
Length = 127259
Score = 119 bits (60), Expect = 8e-24
Identities = 120/140 (85%)
Strand = Plus / Minus
Query: 257 ttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccct 316
|||| ||||||||||| ||| |||| | ||||||||||||||| |||||| |||||||
Sbjct: 93063 ttcgcgctgttcgtcggagtttccatggccgccaacatctccggtggccacttgaacccc 93004
Query: 317 gccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctcttctac 376
| ||||||||||||||||| |||| || || |||||||||||||||||| ||||||||
Sbjct: 93003 gttgtcaccttcggcctcgccgtcggtggccacatcaccatcctcaccggcatcttctac 92944
Query: 377 tgggttgcgcagctcctcgg 396
||||| || ||||| |||||
Sbjct: 92943 tgggtcgctcagctgctcgg 92924
Score = 75.8 bits (38), Expect = 1e-10
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 117 tcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggct 176
|||||||||| ||||| |||||||| |||| ||| |||| || ||||||||||||||||
Sbjct: 93307 tcaaggcctatgtcgcggagttcattgccacactcctctttgtgttcgccggcgtcggct 93248
Query: 177 ctgccattgcctac 190
| ||||||||||||
Sbjct: 93247 ccgccattgcctac 93234
Score = 52.0 bits (26), Expect = 0.002
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 256 gttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccc 315
||||||||| |||| |||||| ||||| |||| || |||||||||||||||| |||||
Sbjct: 73874 gttcgggctcttcgccgcggtgttcatcgccgccgacgtctccggcggccacgtcaaccc 73815
Query: 316 tgccgt 321
|||||
Sbjct: 73814 cgccgt 73809
>dbj| AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 119 bits (60), Expect = 8e-24
Identities = 120/140 (85%)
Strand = Plus / Minus
Query: 257 ttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccct 316
|||| ||||||||||| ||| |||| | ||||||||||||||| |||||| |||||||
Sbjct: 27569087 ttcgcgctgttcgtcggagtttccatggccgccaacatctccggtggccacttgaacccc 27569028
Query: 317 gccgtcaccttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctcttctac 376
| ||||||||||||||||| |||| || || |||||||||||||||||| ||||||||
Sbjct: 27569027 gttgtcaccttcggcctcgccgtcggtggccacatcaccatcctcaccggcatcttctac 27568968
Query: 377 tgggttgcgcagctcctcgg 396
||||| || ||||| |||||
Sbjct: 27568967 tgggtcgctcagctgctcgg 27568948
Score = 75.8 bits (38), Expect = 1e-10
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 117 tcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggct 176
|||||||||| ||||| |||||||| |||| ||| |||| || ||||||||||||||||
Sbjct: 27569331 tcaaggcctatgtcgcggagttcattgccacactcctctttgtgttcgccggcgtcggct 27569272
Query: 177 ctgccattgcctac 190
| ||||||||||||
Sbjct: 27569271 ccgccattgcctac 27569258
Score = 54.0 bits (27), Expect = 4e-04
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
||||||||||| |||| | ||||| ||||||||||||||||||
Sbjct: 28020250 catctccggcgcccacatcaacccggccgtcaccttcggcctc 28020292
Score = 52.0 bits (26), Expect = 0.002
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 256 gttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccc 315
||||||||| |||| |||||| ||||| |||| || |||||||||||||||| |||||
Sbjct: 27549898 gttcgggctcttcgccgcggtgttcatcgccgccgacgtctccggcggccacgtcaaccc 27549839
Query: 316 tgccgt 321
|||||
Sbjct: 27549838 cgccgt 27549833
>ref| XM_467137.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 747
Score = 107 bits (54), Expect = 3e-20
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 222 cgccaacatctccggcggccaccttaacccggccgtgacgttcggcctcgccgtcggcgg 281
Query: 346 tcagatcaccatcctcaccggcctcttctactgg 379
|| ||||||||||||||||| ||||||||||||
Sbjct: 282 ccacatcaccatcctcaccggactcttctactgg 315
Score = 85.7 bits (43), Expect = 1e-13
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 119 aaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctct 178
||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 55 aaggcctacgtggcggagttcatcgccaccctcctcttcgtcttcgctggcgtcggatcc 114
Query: 179 gccattgccta 189
|||||||||||
Sbjct: 115 gccattgccta 125
>dbj| AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 107 bits (54), Expect = 3e-20
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 26627762 cgccaacatctccggcggccaccttaacccggccgtgacgttcggcctcgccgtcggcgg 26627703
Query: 346 tcagatcaccatcctcaccggcctcttctactgg 379
|| ||||||||||||||||| ||||||||||||
Sbjct: 26627702 ccacatcaccatcctcaccggactcttctactgg 26627669
Score = 85.7 bits (43), Expect = 1e-13
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 119 aaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctct 178
||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 26628009 aaggcctacgtggcggagttcatcgccaccctcctcttcgtcttcgctggcgtcggatcc 26627950
Query: 179 gccattgccta 189
|||||||||||
Sbjct: 26627949 gccattgccta 26627939
>dbj| AP005006.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0519E06
Length = 170634
Score = 107 bits (54), Expect = 3e-20
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 170143 cgccaacatctccggcggccaccttaacccggccgtgacgttcggcctcgccgtcggcgg 170084
Query: 346 tcagatcaccatcctcaccggcctcttctactgg 379
|| ||||||||||||||||| ||||||||||||
Sbjct: 170083 ccacatcaccatcctcaccggactcttctactgg 170050
Score = 85.7 bits (43), Expect = 1e-13
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 119 aaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctct 178
||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 170390 aaggcctacgtggcggagttcatcgccaccctcctcttcgtcttcgctggcgtcggatcc 170331
Query: 179 gccattgccta 189
|||||||||||
Sbjct: 170330 gccattgccta 170320
>dbj| AP005289.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1112_F09
Length = 139371
Score = 107 bits (54), Expect = 3e-20
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 61923 cgccaacatctccggcggccaccttaacccggccgtgacgttcggcctcgccgtcggcgg 61864
Query: 346 tcagatcaccatcctcaccggcctcttctactgg 379
|| ||||||||||||||||| ||||||||||||
Sbjct: 61863 ccacatcaccatcctcaccggactcttctactgg 61830
Score = 85.7 bits (43), Expect = 1e-13
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 119 aaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctct 178
||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 62170 aaggcctacgtggcggagttcatcgccaccctcctcttcgtcttcgctggcgtcggatcc 62111
Query: 179 gccattgccta 189
|||||||||||
Sbjct: 62110 gccattgccta 62100
>dbj| AB114830.1 | Oryza sativa (japonica cultivar-group) OsTIP2 mRNA for tonoplast
intrinsic protein, complete cds
Length = 1013
Score = 107 bits (54), Expect = 3e-20
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 295 cgccaacatctccggcggccaccttaacccggccgtgacgttcggcctcgccgtcggcgg 354
Query: 346 tcagatcaccatcctcaccggcctcttctactgg 379
|| ||||||||||||||||| ||||||||||||
Sbjct: 355 ccacatcaccatcctcaccggactcttctactgg 388
Score = 85.7 bits (43), Expect = 1e-13
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 119 aaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctct 178
||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 128 aaggcctacgtggcggagttcatcgccaccctcctcttcgtcttcgctggcgtcggatcc 187
Query: 179 gccattgccta 189
|||||||||||
Sbjct: 188 gccattgccta 198
>dbj| AK064728.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A10, full
insert sequence
Length = 873
Score = 107 bits (54), Expect = 3e-20
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 97 cgccaacatctccggcggccaccttaacccggccgtgacgttcggcctcgccgtcggcgg 156
Query: 346 tcagatcaccatcctcaccggcctcttctactgg 379
|| ||||||||||||||||| ||||||||||||
Sbjct: 157 ccacatcaccatcctcaccggactcttctactgg 190
>emb| AJ307662.1 |OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
Length = 339972
Score = 107 bits (54), Expect = 3e-20
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 332576 cgccaacatctccggcggccaccttaacccggccgtgacgttcggcctcgccgtcggcgg 332517
Query: 346 tcagatcaccatcctcaccggcctcttctactgg 379
|| ||||||||||||||||| ||||||||||||
Sbjct: 332516 ccacatcaccatcctcaccggactcttctactgg 332483
Score = 107 bits (54), Expect = 3e-20
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcgg 345
|||||||||||||||||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 250072 cgccaacatctccggcggccaccttaacccggccgtgacgttcggcctcgccgtcggcgg 250131
Query: 346 tcagatcaccatcctcaccggcctcttctactgg 379
|| ||||||||||||||||| ||||||||||||
Sbjct: 250132 ccacatcaccatcctcaccggactcttctactgg 250165
Score = 85.7 bits (43), Expect = 1e-13
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 119 aaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctct 178
||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 332823 aaggcctacgtggcggagttcatcgccaccctcctcttcgtcttcgctggcgtcggatcc 332764
Query: 179 gccattgccta 189
|||||||||||
Sbjct: 332763 gccattgccta 332753
Score = 85.7 bits (43), Expect = 1e-13
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 119 aaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctct 178
||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 249825 aaggcctacgtggcggagttcatcgccaccctcctcttcgtcttcgctggcgtcggatcc 249884
Query: 179 gccattgccta 189
|||||||||||
Sbjct: 249885 gccattgccta 249895
>gb| AF326501.1 |AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA,
complete cds
Length = 1110
Score = 103 bits (52), Expect = 5e-19
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 95 gactccttcagcgtggcctctctcaaggcctacgtcgccgagttcatctccaccctcatc 154
||||||||||||| |||| ||||||||||||| |||||||||||| |||||||| ||
Sbjct: 258 gactccttcagcgccacctccatcaaggcctacgtggccgagttcatcgccaccctcctc 317
Query: 155 ttcgtcttcgccggcgtcggctctgccattgcctac 190
|||||||||||||||||||| || ||||| ||||||
Sbjct: 318 ttcgtcttcgccggcgtcggttccgccatcgcctac 353
Score = 65.9 bits (33), Expect = 1e-07
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 290 aacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcggtcag 349
|||||||| ||||||||| ||||||| ||||| || ||||| || || | ||||| ||
Sbjct: 453 aacatctcgggcggccacctgaacccggccgtgacgttcgggctggccgtgggcggccac 512
Query: 350 atcaccatcctcaccggcctcttctactgggttgcgcagct 390
||||||||||| || ||| ||||||||||||| || |||||
Sbjct: 513 atcaccatcctgacgggcgtcttctactgggtggcccagct 553
>gb| AY105015.1 | Zea mays PCO137646 mRNA sequence
Length = 1238
Score = 103 bits (52), Expect = 5e-19
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 95 gactccttcagcgtggcctctctcaaggcctacgtcgccgagttcatctccaccctcatc 154
||||||||||||| |||| ||||||||||||| |||||||||||| |||||||| ||
Sbjct: 257 gactccttcagcgccacctccatcaaggcctacgtggccgagttcatcgccaccctcctc 316
Query: 155 ttcgtcttcgccggcgtcggctctgccattgcctac 190
|||||||||||||||||||| || ||||| ||||||
Sbjct: 317 ttcgtcttcgccggcgtcggttccgccatcgcctac 352
Score = 65.9 bits (33), Expect = 1e-07
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 290 aacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcggtcag 349
|||||||| ||||||||| ||||||| ||||| || ||||| || || | ||||| ||
Sbjct: 452 aacatctcgggcggccacctgaacccggccgtgacgttcgggctggccgtgggcggccac 511
Query: 350 atcaccatcctcaccggcctcttctactgggttgcgcagct 390
||||||||||| || ||| ||||||||||||| || |||||
Sbjct: 512 atcaccatcctgacgggcgtcttctactgggtggcccagct 552
>gb| DQ442393.1 | Striga asiatica clone St461 aquaporin mRNA, partial cds
Length = 493
Score = 101 bits (51), Expect = 2e-18
Identities = 105/123 (85%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcggt 346
||||||||||||||||||||||| ||||| ||||||||||| || || ||| | |||||
Sbjct: 244 gccaacatctccggcggccacgtcaacccggccgtcacctttgggctggcggtgggcggc 303
Query: 347 cagatcaccatcctcaccggcctcttctactgggttgcgcagctcctcggtgccatcgtc 406
|| ||||||||||||||||| | ||||||||| |||| ||||| || || ||| |||||
Sbjct: 304 caaatcaccatcctcaccggaatattctactggattgcccagcttctgggcgccgtcgtc 363
Query: 407 ggc 409
|||
Sbjct: 364 ggc 366
Score = 65.9 bits (33), Expect = 1e-07
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 92 gatgactccttcagcgtggcctctctcaaggcctacgtcgccgagttcatctccaccctc 151
|||||||| |||||| ||||||| | ||||| ||| | ||||||||||| ||||| |
Sbjct: 49 gatgactcgttcagcctggcctcggtgaaggcttacattgccgagttcatttccacgttg 108
Query: 152 atcttcgtcttcgccggcgtcggctctgccattgcct 188
| || |||||||||||||||||||| ||||||||||
Sbjct: 109 ctttttgtcttcgccggcgtcggctcagccattgcct 145
>emb| AJ245953.1 |SOL245953 Spinacia oleracea mRNA for delta tonoplast intrinsic protein (dtip
gene)
Length = 1101
Score = 97.6 bits (49), Expect = 3e-17
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 290 aacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcggtcag 349
|||||||||||||| ||||| ||||| ||||||||||||||| | || |||||||||||
Sbjct: 328 aacatctccggcggtcacgtcaaccccgccgtcaccttcggcttggccctcggcggtcaa 387
Query: 350 atcaccatcctcaccgg 366
|||||||||||||||||
Sbjct: 388 atcaccatcctcaccgg 404
>emb| AJ314583.1 |POC314583 Posidonia oceanica mRNA for putative tonoplast intrinsic protein
(tip1 gene)
Length = 1112
Score = 95.6 bits (48), Expect = 1e-16
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 116 ctcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggc 175
||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 137 ctcaaggccaccctcgccgagttcatctccaccctcatcttcgtcttcgccggcgaaggc 196
Query: 176 tctgccattgcctaca 191
|||| ||| |||||||
Sbjct: 197 tctggcatcgcctaca 212
Score = 58.0 bits (29), Expect = 3e-05
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 305 ggcgccaacatctccggtggccatgtcaaccctgccgtcac 345
>gb| AF326502.1 |AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA,
complete cds
Length = 1073
Score = 91.7 bits (46), Expect = 2e-15
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 95 gactccttcagcgtggcctctctcaaggcctacgtcgccgagttcatctccaccctcatc 154
|||||||||||||| |||| ||||||||||||| || ||||||||| |||||||| ||
Sbjct: 98 gactccttcagcgtcacctccatcaaggcctacgtggcggagttcatcgccaccctcctc 157
Query: 155 ttcgtcttcgccggcgtcggctctgccattgcct 188
||||||||||||||||| || || ||||| ||||
Sbjct: 158 ttcgtcttcgccggcgtgggttccgccatcgcct 191
Score = 89.7 bits (45), Expect = 7e-15
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 290 aacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcggtcag 349
|||| ||||||||||||| ||||||| ||||| || |||||||| || | ||||| ||
Sbjct: 293 aacacctccggcggccacctgaaccccgccgtgacgttcggcctggccgtgggcggccac 352
Query: 350 atcaccatcctcaccggcctcttctactgggttgcgcagct 390
|||||| ||||||||||||||||||||||||| || |||||
Sbjct: 353 atcaccgtcctcaccggcctcttctactgggtggcccagct 393
>ref| XM_470213.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 753
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 264
Query: 323 accttcggc 331
|||||||||
Sbjct: 265 accttcggc 273
Score = 77.8 bits (39), Expect = 3e-11
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gccgagttcatctccaccctcatcttcgtcttcgccggc 111
>gb| DP000009.1 | Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 2545277 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 2545218
Query: 323 accttcggc 331
|||||||||
Sbjct: 2545217 accttcggc 2545209
Score = 77.8 bits (39), Expect = 3e-11
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||
Sbjct: 2546163 gccgagttcatctccaccctcatcttcgtcttcgccggc 2546125
>gb| AC090485.3 |AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0067N01, from chromosome 3, complete sequence
Length = 159636
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 124817 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 124876
Query: 323 accttcggc 331
|||||||||
Sbjct: 124877 accttcggc 124885
Score = 77.8 bits (39), Expect = 3e-11
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||
Sbjct: 123931 gccgagttcatctccaccctcatcttcgtcttcgccggc 123969
>dbj| AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 2545387 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 2545328
Query: 323 accttcggc 331
|||||||||
Sbjct: 2545327 accttcggc 2545319
Score = 77.8 bits (39), Expect = 3e-11
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||
Sbjct: 2546273 gccgagttcatctccaccctcatcttcgtcttcgccggc 2546235
>gb| AF275315.1 |AF275315 Lotus japonicus water-selective transport intrinsic membrane
protein 1 mRNA, complete cds
Length = 1162
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcacc 325
|||||||| || ||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 267 ttcgtcgccgtctccatcagcgccaacatctccggcggccacgtcaaccccgccgtcacc 326
Query: 326 ttcggcctc 334
|||||||||
Sbjct: 327 ttcggcctc 335
Score = 63.9 bits (32), Expect = 4e-07
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 134 gagttcatctccaccctcatcttcgtcttcgccggc 169
||||||||||||||| ||||||||||||||||||||
Sbjct: 135 gagttcatctccaccttcatcttcgtcttcgccggc 170
>dbj| D25534.1 |RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds
Length = 1080
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 283 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 342
Query: 323 accttcggc 331
|||||||||
Sbjct: 343 accttcggc 351
Score = 77.8 bits (39), Expect = 3e-11
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gccgagttcatctccaccctcatcttcgtcttcgccggc 189
>dbj| AK110727.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E06, full
insert sequence
Length = 1024
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 686 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 627
Query: 323 accttcggc 331
|||||||||
Sbjct: 626 accttcggc 618
>dbj| AK104123.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full
insert sequence
Length = 1034
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 292 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 351
Query: 323 accttcggc 331
|||||||||
Sbjct: 352 accttcggc 360
Score = 77.8 bits (39), Expect = 3e-11
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gccgagttcatctccaccctcatcttcgtcttcgccggc 198
>dbj| AK068986.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full
insert sequence
Length = 1082
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 294 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 353
Query: 323 accttcggc 331
|||||||||
Sbjct: 354 accttcggc 362
Score = 77.8 bits (39), Expect = 3e-11
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gccgagttcatctccaccctcatcttcgtcttcgccggc 200
>dbj| AK060994.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full
insert sequence
Length = 870
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 290 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 349
Query: 323 accttcggc 331
|||||||||
Sbjct: 350 accttcggc 358
Score = 77.8 bits (39), Expect = 3e-11
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gccgagttcatctccaccctcatcttcgtcttcgccggc 196
>dbj| AK058322.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full
insert sequence
Length = 1055
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 263 ctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtc 322
|||||||| ||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 290 ctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaacccggccgtg 349
Query: 323 accttcggc 331
|||||||||
Sbjct: 350 accttcggc 358
Score = 77.8 bits (39), Expect = 3e-11
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gccgagttcatctccaccctcatcttcgtcttcgccggc 196
>dbj| AP004479.1 | Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012b,
complete sequence
Length = 41820
Score = 89.7 bits (45), Expect = 7e-15
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcacc 325
|||||||| || ||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 10638 ttcgtcgccgtctccatcagcgccaacatctccggcggccacgtcaaccccgccgtcacc 10579
Query: 326 ttcggcctc 334
|||||||||
Sbjct: 10578 ttcggcctc 10570
Score = 63.9 bits (32), Expect = 4e-07
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 134 gagttcatctccaccctcatcttcgtcttcgccggc 169
||||||||||||||| ||||||||||||||||||||
Sbjct: 10770 gagttcatctccaccttcatcttcgtcttcgccggc 10735
>emb| X95650.1 |TGTIP1GEN T.gesneriana mRNA for tonoplast intrinsic protein
Length = 992
Score = 87.7 bits (44), Expect = 3e-14
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 249 ggcgccaacatctccggcggccatgtgaaccctgccgtcaccttcggc 296
>gb| AY389618.1 | Hyacinthus orientalis mitochondrial tonoplast intrinsic protein
(TIP1) mRNA, partial cds
Length = 662
Score = 81.8 bits (41), Expect = 2e-12
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 110
Score = 48.1 bits (24), Expect = 0.024
Identities = 90/112 (80%)
Strand = Plus / Plus
Query: 282 tcggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcg 341
|||| ||||||||||| || |||||||| ||||| || ||||| |||||| | ||||
Sbjct: 223 tcggggccaacatctcgggaggccacgtcaacccggcagtcacgttcggcgccttcctcg 282
Query: 342 gcggtcagatcaccatcctcaccggcctcttctactgggttgcgcagctcct 393
|||| | ||||| || || ||||||| |||||||||| |||||||||||
Sbjct: 283 gcggcaacatcacgctcttccgcggcctcctctactgggtggcgcagctcct 334
>gb| AF326500.1 |AF326500 Zea mays tonoplast membrane integral protein ZmTIP1-2 mRNA,
complete cds
Length = 1021
Score = 81.8 bits (41), Expect = 2e-12
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 243 gccaacatctccggcggccacgtgaaccctgccgtgaccttcggc 287
Score = 79.8 bits (40), Expect = 7e-12
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 118 caaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggc 169
||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 74 caaggccgccgtcgccgagttcatctccacgctcatcttcgtcttcgccggc 125
>gb| AY112388.1 | Zea mays CL24208_1 mRNA sequence
Length = 833
Score = 81.8 bits (41), Expect = 2e-12
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 767 gccaacatctccggcggccacgtgaaccctgccgtgaccttcggc 723
>emb| AJ242805.1 |SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic
protein (TIP)
Length = 1146
Score = 79.8 bits (40), Expect = 7e-12
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcct 188
|||| |||||||||||||||||||||||||||||||||||| ||||| | | | ||||
Sbjct: 153 tcgctgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcgtggcct 212
Query: 189 acaccaaggtgagcggcggc 208
||| |||| |||||||||||
Sbjct: 213 acagcaagctgagcggcggc 232
Score = 54.0 bits (27), Expect = 4e-04
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 285 gcgccaacatctccggcggccacgtgaaccc 315
||||||||||||||||||| |||||||||||
Sbjct: 306 gcgccaacatctccggcggtcacgtgaaccc 336
>gb| U86762.1 |TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA,
complete cds
Length = 1133
Score = 77.8 bits (39), Expect = 3e-11
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 257 ttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccct 316
|||| ||||||||| ||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 293 ttcgcgctgttcgtggcggtgtccgtgggcgccaacatctccggcgggcacgtgaacccg 352
Query: 317 gccgtcaccttcggc 331
||||| |||||||||
Sbjct: 353 gccgtgaccttcggc 367
Score = 73.8 bits (37), Expect = 4e-10
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 169
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 165 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 205
>dbj| AB010416.1 | Raphanus sativus VIP3 mRNA for delta-VM23, complete cds
Length = 911
Score = 77.8 bits (39), Expect = 3e-11
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcacc 325
||||| |||||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 243 ttcgtggcggttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcact 302
Query: 326 ttcggcctcgcgctcggcggtcagatcaccatcctcaccggcctcttctactgggttgcg 385
|| ||||| || |||| ||||| ||||| | ||||||| | ||||||||||| ||
Sbjct: 303 tttggccttgctgtcggtggtcaaatcacactaatcaccggagttttctactgggtggct 362
Query: 386 cagctcctcgg 396
||||| |||||
Sbjct: 363 cagcttctcgg 373
>gb| BT016509.1 | Zea mays clone Contig342 mRNA sequence
Length = 1237
Score = 75.8 bits (38), Expect = 1e-10
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
|||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 387 cgccaacatctccggcggccacgtcaacccggccgtcaccttcggc 432
>dbj| AB048248.1 | Pyrus communis Py-gTIP mRNA for gamma tonoplast intrinsic protein,
complete cds
Length = 1122
Score = 75.8 bits (38), Expect = 1e-10
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcacc 325
|||||||| || ||||| ||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 279 ttcgtcgccgtctccatcagcgccaacatctccggcggacacgttaacccggccgtcacc 338
Query: 326 ttcggc 331
||||||
Sbjct: 339 ttcggc 344
Score = 56.0 bits (28), Expect = 1e-04
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggcg 170
|||||||||||||| || ||||||||||| ||||||||||
Sbjct: 144 gccgagttcatctcgacgctcatcttcgttttcgccggcg 183
>gb| BT016300.1 | Zea mays clone Contig133 mRNA sequence
Length = 1112
Score = 73.8 bits (37), Expect = 4e-10
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 251 cacgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtg 310
|||| ||||| ||||||||| ||||| | | ||||| |||||||||||||| ||||||
Sbjct: 290 cacgcgttcgcgctgttcgtggcggtgtcggtgggcgcgaacatctccggcgggcacgtg 349
Query: 311 aaccctgccgtcaccttcggc 331
||||||||||| |||||||||
Sbjct: 350 aaccctgccgtgaccttcggc 370
Score = 73.8 bits (37), Expect = 4e-10
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 168 tcgctgagttcatctccaccctcatcttcgtcttcgccggc 208
>emb| X80266.1 |HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
Length = 1020
Score = 73.8 bits (37), Expect = 4e-10
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 169
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 134 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 174
Score = 58.0 bits (29), Expect = 3e-05
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 251 cacgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtg 310
|||| ||||| ||||||||| ||||| | | |||||||||||||| ||||| ||||||
Sbjct: 256 cacgcgttcgcgctgttcgtggcggtgtcggtgggcgccaacatctcgggcgggcacgtg 315
Query: 311 aaccctgccgtcaccttcggc 331
||||| || || |||||||||
Sbjct: 316 aacccggcggtgaccttcggc 336
>gb| AY243803.1 | Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds
Length = 1039
Score = 73.8 bits (37), Expect = 4e-10
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 72 tcgctgagttcatctccaccctcatcttcgtcttcgccggc 112
Score = 58.0 bits (29), Expect = 3e-05
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 251 cacgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtg 310
|||| ||||| ||||||||| ||||| | | ||||| |||||||| ||||| ||||||
Sbjct: 194 cacgcgttcgcgctgttcgtggcggtgtcggtgggcgcgaacatctcgggcgggcacgtg 253
Query: 311 aaccctgccgtcaccttcggc 331
||||| ||||| |||||||||
Sbjct: 254 aacccggccgtgaccttcggc 274
>gb| AY104464.1 | Zea mays PCO114899 mRNA sequence
Length = 1167
Score = 73.8 bits (37), Expect = 4e-10
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 167 tcgctgagttcatctccaccctcatcttcgtcttcgccggc 207
Score = 65.9 bits (33), Expect = 1e-07
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 251 cacgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtg 310
|||| ||||| ||||||||| ||||| | | ||||| |||||||||||||| ||||||
Sbjct: 289 cacgcgttcgcgctgttcgtggcggtgtcggtgggcgcgaacatctccggcgggcacgtg 348
Query: 311 aaccctgccgtcaccttcggc 331
||||| ||||| |||||||||
Sbjct: 349 aacccggccgtgaccttcggc 369
>gb| AF037061.1 |AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds
Length = 1097
Score = 73.8 bits (37), Expect = 4e-10
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 251 cacgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtg 310
|||| ||||| ||||||||| ||||| | | ||||| |||||||||||||| ||||||
Sbjct: 286 cacgcgttcgcgctgttcgtggcggtgtctgtgggcgcgaacatctccggcgggcacgtg 345
Query: 311 aaccctgccgtcaccttcggc 331
||||||||||| |||||||||
Sbjct: 346 aaccctgccgtgaccttcggc 366
Score = 73.8 bits (37), Expect = 4e-10
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 169
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 164 tcgctgagttcatctccaccctcatcttcgtcttcgccggc 204
>emb| X95952.1 |HAAP H.annuus mRNA for aquaporin
Length = 931
Score = 71.9 bits (36), Expect = 2e-09
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 123 cctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgcca 182
||||||| || ||||||||||||||||| ||||||||||||| || |||||||| ||||
Sbjct: 111 cctacgttgcagagttcatctccacccttctcttcgtcttcgcgggtgtcggctccgcca 170
Query: 183 ttgc 186
||||
Sbjct: 171 ttgc 174
Score = 56.0 bits (28), Expect = 1e-04
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 269 gtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcaccttc 328
|||||||| |||||| ||| |||||||| |||||||| || || || || |||||||||
Sbjct: 257 gtcgcggtctccatcgccgctaacatctctggcggccatgtcaatccagctgtcaccttc 316
Query: 329 ggcctcgcgctcggcggtcagatcaccatcctcaccggcctcttctactgggttgc 384
|| | || | |||||||| ||||||||||| || ||| |||| |||||| ||||
Sbjct: 317 ggattggctgttggcggtcaaatcaccatcctaactggcatcttttactggattgc 372
>gb| L12257.1 |SOYNODA Glycine max nodulin-26 mRNA, complete cds
Length = 1047
Score = 71.9 bits (36), Expect = 2e-09
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 288 ccaacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
|||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 341 ccaacatctccggcggccacgtcaaccccgccgtcaccttcggc 384
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 134 gagttcatctccaccctcatcttcgtcttcgccgg 168
||||||||||||||| | |||||||| ||||||||
Sbjct: 187 gagttcatctccaccttgatcttcgtgttcgccgg 221
>emb| AJ289866.2 |VVI289866 Vitis vinifera mRNA for putative aquaporin (delta-TIP gene)
Length = 1017
Score = 67.9 bits (34), Expect = 3e-08
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 285 gcgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcg 344
|||||||||||||||| ||||| || |||||||| || |||||||| || | | || |
Sbjct: 221 gcgccaacatctccggtggccatgttaaccctgcggtgaccttcgggctggttgttggtg 280
Query: 345 gtcagatcaccatcctcaccggcctcttctactgggttgcgcagct 390
||||||||||||| ||||| ||| |||| |||||| |||| |||||
Sbjct: 281 gtcagatcaccattctcactggcatcttgtactggattgcccagct 326
Score = 48.1 bits (24), Expect = 0.024
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 80 tttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctac 127
||||| ||||||||||| |||||||| ||||||| |||||||||||
Sbjct: 16 tttggccgcttcgatgattccttcagtttggcctccttcaaggcctac 63
>gb| AF271661.1 |AF271661 Vitis berlandieri x Vitis rupestris putative aquaporin TIP1 (TIP1)
mRNA, complete cds
Length = 1057
Score = 67.9 bits (34), Expect = 3e-08
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 285 gcgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcg 344
|||||||||||||||| ||||| || |||||||| || |||||||| || | | || |
Sbjct: 263 gcgccaacatctccggtggccatgttaaccctgcagtgaccttcgggctggttgttggtg 322
Query: 345 gtcagatcaccatcctcaccggcctcttctactgggttgcgcagct 390
||||||||||||| ||||| ||| |||| |||||| |||| |||||
Sbjct: 323 gtcagatcaccattctcactggcatcttgtactggattgcccagct 368
Score = 52.0 bits (26), Expect = 0.002
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||| || ||||||||||| |||||||| ||||||| ||||||||||| | || |||
Sbjct: 55 gccttcggccgcttcgatgattccttcagtttggcctccttcaaggcctaccttgctgag 114
Query: 137 ttcatctccaccctcatcttcgtctt 162
||| ||||||| | ||||||||||
Sbjct: 115 ttccactccaccatactcttcgtctt 140
>gb| AF326509.1 |AF326509 Zea mays tonoplast membrane integral protein ZmTIP5-1 mRNA,
complete cds
Length = 1021
Score = 67.9 bits (34), Expect = 3e-08
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 256 gttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccc 315
||||||||| |||| |||||| ||||| |||| || |||||||||||||||| |||||
Sbjct: 250 gttcgggctcttcgccgcggtgctcatcgccgccgacgtctccggcggccacgtcaaccc 309
Query: 316 tgccgtcaccttcg 329
||||||||| ||||
Sbjct: 310 tgccgtcacgttcg 323
Score = 65.9 bits (33), Expect = 1e-07
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 123 cctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgcca 182
||||| |||||||||||||||||||| || ||||||| ||| ||| ||||||||| ||||
Sbjct: 114 cctacctcgccgagttcatctccaccttcctcttcgtgttcaccgccgtcggctcagcca 173
Query: 183 t 183
|
Sbjct: 174 t 174
>dbj| AB211518.1 | Lycopersicon esculentum mRNA for similar to aquaporin, complete
cds, clone:FC01AB01
Length = 986
Score = 67.9 bits (34), Expect = 3e-08
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 257 ttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccct 316
|||||| |||||||||| || || |||| || |||||||||||||||||||| ||||||
Sbjct: 252 ttcgggttgttcgtcgccgtctccgtcggtgctaacatctccggcggccacgtcaaccct 311
Query: 317 gccgtcaccttcgg 330
|| || ||||||||
Sbjct: 312 gctgttaccttcgg 325
>dbj| AB126924.1 | Prunus persica Pr-gTIP1 mRNA for tonoplast intrinsic protein,
complete cds
Length = 1143
Score = 67.9 bits (34), Expect = 3e-08
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggcg 170
||||||||||||||||||| || |||||||||||||||||||
Sbjct: 171 tcgccgagttcatctccacgctgatcttcgtcttcgccggcg 212
Score = 44.1 bits (22), Expect = 0.38
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 290 aacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
|||||||||||||| ||||| ||||| || ||||| ||||||
Sbjct: 332 aacatctccggcggacacgtcaaccccgcggtcactttcggc 373
>gb| DQ202710.1 | Olea europaea tonoplast intrinsic protein (tip) mRNA, complete cds
Length = 1064
Score = 67.9 bits (34), Expect = 3e-08
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 tcggcgccaacatctccggcggccacgtgaaccctgccgtcacctt 327
|||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 319 tcggtgccaacatctccggcggccacgtaaaccctgctgtcacctt 364
>gb| AF047173.1 | Vernicia fordii aquaporin mRNA, complete cds
Length = 1049
Score = 65.9 bits (33), Expect = 1e-07
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 282 tcggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcg 341
|||| |||||||||||||| ||||| || |||||||| ||| |||| ||| | || || |
Sbjct: 299 tcggtgccaacatctccggtggccatgtaaaccctgctgtcgcctttggcttggctcttg 358
Query: 342 gcggtcagatcaccatcctcaccggcctcttctactgggttgcgcagct 390
| ||||| |||||||| ||||| ||| | ||||||||| |||| |||||
Sbjct: 359 gtggtcaaatcaccattctcactggcattttctactggattgctcagct 407
>ref| NM_112495.2 | Arabidopsis thaliana DELTA-TIP; water channel AT3G16240 (DELTA-TIP)
mRNA, complete cds
Length = 1125
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 312 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 370
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 123 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 182
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 183 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 236
>ref| NM_197137.1 | Oryza sativa (japonica cultivar-group) putative beta-tonoplast
intrinsic protein (OSJNBa0051D19.19), mRNA
Length = 1186
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 394 caacatctccggcggccacgtcaacccggccatcaccttcggc 436
Score = 42.1 bits (21), Expect = 1.5
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 367 cctcttctactgggttgcgcagctcctcggtgccatcgtcg 407
||||||||||||| | || ||||||||||| ||| ||||||
Sbjct: 472 cctcttctactggctcgcccagctcctcggcgccgtcgtcg 512
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 132 ccgagttcatctccaccctcatcttcgtcttcgccg 167
|||||||| || ||||| |||||||||||||||||
Sbjct: 240 ccgagttcctcgccaccgccatcttcgtcttcgccg 275
>ref| NM_189497.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 759
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 118 caaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccgg 168
||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 60 caaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccgg 110
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccc 315
||||||||||||||||| |||||||||||
Sbjct: 229 gccaacatctccggcgggcacgtgaaccc 257
>gb| AC023240.9 | Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
sequence
Length = 131984
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 26654 caacatctccggcggccacgtcaacccggccatcaccttcggc 26612
Score = 42.1 bits (21), Expect = 1.5
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 367 cctcttctactgggttgcgcagctcctcggtgccatcgtcg 407
||||||||||||| | || ||||||||||| ||| ||||||
Sbjct: 26576 cctcttctactggctcgcccagctcctcggcgccgtcgtcg 26536
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 132 ccgagttcatctccaccctcatcttcgtcttcgccg 167
|||||||| || ||||| |||||||||||||||||
Sbjct: 26910 ccgagttcctcgccaccgccatcttcgtcttcgccg 26875
>emb| Y08962.1 |OSTRAMBPR O.sativa mRNA for transmembrane protein
Length = 1179
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 392 catctccggcggccacatcaacccggccgtcaccttcggcctc 434
>emb| AJ271796.1 |ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene)
Length = 1364
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 408 catctccggcggccacatcaacccggccgtcaccttcggcctc 450
>emb| AJ133748.1 |PAB133748 Picea abies mRNA for major intrinsic protein
Length = 1168
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||||||||| || || |||||||||
Sbjct: 340 caacatctccggcggccacgtgaacccggcggtgaccttcggc 382
Score = 56.0 bits (28), Expect = 1e-04
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggcg 170
||||||||| ||||||| ||||||||||||||||| ||||
Sbjct: 182 gccgagttcttctccacgctcatcttcgtcttcgctggcg 221
>emb| AJ005078.2 |PAAJ5078 Picea abies mRNA for aquaporin-like protein
Length = 1007
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 297 ggcgccaacatctccggtggccacgttaaccctgcagttaccttcgg 343
>gb| U92651.2 |BOU92651 Brassica oleracea var. botrytis tonoplast intrinsic protein
bobTIP26-1 mRNA, complete cds
Length = 942
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 262 ggcgccaacatctccggtggacacgttaaccctgccgtcacgttcgg 308
>gb| AY081622.1 | Arabidopsis thaliana delta tonoplast intrinsic protein (At3g16230)
mRNA, complete cds
Length = 853
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 202 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 260
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 13 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 72
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 73 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 126
>gb| AY065181.1 | Arabidopsis thaliana delta tonoplast intrinsic protein (At3g16230;
MYA6.5) mRNA, complete cds
Length = 929
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 273 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 331
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 84 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 143
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 144 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 197
>gb| U62778.1 |GHU62778 Gossypium hirsutum delta-tonoplast intrinsic protein mRNA, complete
cds
Length = 997
Score = 61.9 bits (31), Expect = 2e-06
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 74 atcgcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgcc 133
||||||||||||||||| ||||| |||||||| ||| || ||||||||||| | ||
Sbjct: 47 atcgcctttggtcgctttgatgattccttcagtttggggactgtcaaggcctaccttgct 106
Query: 134 gagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctacacc 193
||||| ||||| || | | || || ||||||||||| |||||||||||||| |||| |
Sbjct: 107 gagtttatctcaactttggtgtttgttttcgccggcgttggctctgccattgcttacaac 166
Query: 194 aag 196
|||
Sbjct: 167 aag 169
Score = 40.1 bits (20), Expect = 5.9
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 281 atcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| ||||||||||| || ||||| || |||||||| |||||
Sbjct: 254 atcggtgccaacatctcaggtggccatgtcaaccctgcagtcac 297
>dbj| AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 18186474 caacatctccggcggccacgtcaacccggccatcaccttcggc 18186516
Score = 42.1 bits (21), Expect = 1.5
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 367 cctcttctactgggttgcgcagctcctcggtgccatcgtcg 407
||||||||||||| | || ||||||||||| ||| ||||||
Sbjct: 18186552 cctcttctactggctcgcccagctcctcggcgccgtcgtcg 18186592
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 132 ccgagttcatctccaccctcatcttcgtcttcgccg 167
|||||||| || ||||| |||||||||||||||||
Sbjct: 18186218 ccgagttcctcgccaccgccatcttcgtcttcgccg 18186253
>dbj| AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 118 caaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccgg 168
||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 43109448 caaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccgg 43109398
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 287 gccaacatctccggcggccacgtgaaccc 315
||||||||||||||||| |||||||||||
Sbjct: 43109198 gccaacatctccggcgggcacgtgaaccc 43109170
Score = 50.1 bits (25), Expect = 0.006
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 127 cgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccat 183
|||||||||| || || |||| || ||||||||||| ||||||||||||| |||||
Sbjct: 7296843 cgtcgccgagctcctcctcaccttcctcttcgtcttctccggcgtcggctccgccat 7296899
Score = 46.1 bits (23), Expect = 0.096
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 294 tctccggcggccacgtgaaccctgccgtcaccttcggcctcgc 336
|||||||||||||| | ||||| |||||||| ||||||||||
Sbjct: 7297090 tctccggcggccacatcaacccggccgtcacgctcggcctcgc 7297132
>gb| AF326489.1 |AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete
cds
Length = 1338
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 399 catctccggcggccacatcaacccggccgtcaccttcggcctc 441
>emb| BX823177.1 |CNS0A5ZD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZE06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 903
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 250 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 308
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 61 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 120
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 121 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 174
>emb| BX823081.1 |CNS0A5VY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB88ZH07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 957
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 255 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 313
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 66 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 125
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 126 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 179
>emb| BX823757.1 |CNS0A5CX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS72ZD10 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 945
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 252 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 310
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 63 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 122
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 123 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 176
>dbj| AP003627.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0459B04
Length = 142475
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 118 caaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccgg 168
||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 106477 caaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccgg 106427
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 287 gccaacatctccggcggccacgtgaaccc 315
||||||||||||||||| |||||||||||
Sbjct: 106227 gccaacatctccggcgggcacgtgaaccc 106199
>gb| AY085921.1 | Arabidopsis thaliana clone 19689 mRNA, complete sequence
Length = 978
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 274 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 332
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 85 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 144
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 145 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 198
>dbj| AB023046.1 | Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYA6
Length = 75289
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 18702 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 18760
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 18410 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 18469
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 18470 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 18523
>dbj| AK111931.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C03, full
insert sequence
Length = 1200
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 403 caacatctccggcggccacgtcaacccggccatcaccttcggc 445
Score = 42.1 bits (21), Expect = 1.5
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 367 cctcttctactgggttgcgcagctcctcggtgccatcgtcg 407
||||||||||||| | || ||||||||||| ||| ||||||
Sbjct: 481 cctcttctactggctcgcccagctcctcggcgccgtcgtcg 521
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 132 ccgagttcatctccaccctcatcttcgtcttcgccg 167
|||||||| || ||||| |||||||||||||||||
Sbjct: 249 ccgagttcctcgccaccgccatcttcgtcttcgccg 284
>dbj| AK111768.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023066H10, full
insert sequence
Length = 1346
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 118 caaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccgg 168
||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 84 caaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccgg 134
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccc 315
||||||||||||||||| |||||||||||
Sbjct: 253 gccaacatctccggcgggcacgtgaaccc 281
>dbj| AK111747.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023050B20, full
insert sequence
Length = 1149
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 118 caaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccgg 168
||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 133 caaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccgg 183
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccc 315
||||||||||||||||| |||||||||||
Sbjct: 302 gccaacatctccggcgggcacgtgaaccc 330
>dbj| AB114829.1 | Oryza sativa (japonica cultivar-group) OsTIP1 mRNA for tonoplast
intrinsic protein, complete cds
Length = 970
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 118 caaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccgg 168
||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 70 caaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccgg 120
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccc 315
||||||||||||||||| |||||||||||
Sbjct: 239 gccaacatctccggcgggcacgtgaaccc 267
>dbj| AB114828.1 | Oryza sativa (japonica cultivar-group) OsTIP3 mRNA for tonoplast
intrinsic protein, complete cds
Length = 1178
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 386 caacatctccggcggccacgtcaacccggccatcaccttcggc 428
Score = 42.1 bits (21), Expect = 1.5
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 367 cctcttctactgggttgcgcagctcctcggtgccatcgtcg 407
||||||||||||| | || ||||||||||| ||| ||||||
Sbjct: 464 cctcttctactggctcgcccagctcctcggcgccgtcgtcg 504
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 132 ccgagttcatctccaccctcatcttcgtcttcgccg 167
|||||||| || ||||| |||||||||||||||||
Sbjct: 232 ccgagttcctcgccaccgccatcttcgtcttcgccg 267
>dbj| AK106383.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full
insert sequence
Length = 1787
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 685 caacatctccggcggccacgtcaacccggccatcaccttcggc 643
Score = 42.1 bits (21), Expect = 1.5
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 367 cctcttctactgggttgcgcagctcctcggtgccatcgtcg 407
||||||||||||| | || ||||||||||| ||| ||||||
Sbjct: 607 cctcttctactggctcgcccagctcctcggcgccgtcgtcg 567
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 132 ccgagttcatctccaccctcatcttcgtcttcgccg 167
|||||||| || ||||| |||||||||||||||||
Sbjct: 941 ccgagttcctcgccaccgccatcttcgtcttcgccg 906
>dbj| AK104736.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D02, full
insert sequence
Length = 1163
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 386 catctccggcggccacatcaacccggccgtcaccttcggcctc 428
>dbj| AK098849.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013000E16, full
insert sequence
Length = 1164
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 387 catctccggcggccacatcaacccggccgtcaccttcggcctc 429
>dbj| AK065188.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013002E02, full
insert sequence
Length = 1167
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 389 catctccggcggccacatcaacccggccgtcaccttcggcctc 431
>dbj| AK058323.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B07, full
insert sequence
Length = 1462
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 685 catctccggcggccacatcaacccggccgtcaccttcggcctc 727
>gb| U39486.1 |ATU39486 Arabidopsis thaliana delta tonoplast integral protein gene, partial
cds
Length = 2235
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 1454 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 1512
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 1162 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 1221
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 1222 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 1275
>gb| U39485.1 |ATU39485 Arabidopsis thaliana delta tonoplast integral protein mRNA,
complete cds
Length = 939
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 266 ttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
||||| || ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 219 ttcgtggccgttgcaatcggagccaacatctccggtggccatgtgaacccagccgtcac 277
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 30 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 89
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 90 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 143
>gb| AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 18195727 caacatctccggcggccacgtcaacccggccatcaccttcggc 18195769
Score = 42.1 bits (21), Expect = 1.5
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 367 cctcttctactgggttgcgcagctcctcggtgccatcgtcg 407
||||||||||||| | || ||||||||||| ||| ||||||
Sbjct: 18195805 cctcttctactggctcgcccagctcctcggcgccgtcgtcg 18195845
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 132 ccgagttcatctccaccctcatcttcgtcttcgccg 167
|||||||| || ||||| |||||||||||||||||
Sbjct: 18195471 ccgagttcctcgccaccgccatcttcgtcttcgccg 18195506
>gb| U77297.1 |OSU77297 Oryza sativa transmembrane protein mRNA, complete cds
Length = 1179
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 392 catctccggcggccacatcaacccggccgtcaccttcggcctc 434
>dbj| AP004484.1 | Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017,
complete sequence
Length = 121127
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 34684 catctccggcggccacatcaaccccgccgtcaccttcggcctc 34726
>gb| DQ237285.1 | Panax ginseng tonoplast intrinsic protein (TIP1) mRNA, complete cds
Length = 940
Score = 60.0 bits (30), Expect = 6e-06
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 282 tcggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
|||| |||||||||||||||||||| || ||||||||||| || ||||||
Sbjct: 282 tcggagccaacatctccggcggccatgttaaccctgccgttacattcggc 331
>gb| AY639596.1 | Salicornia herbacea tonoplast intrinsic protein gamma mRNA,
complete cds
Length = 1108
Score = 60.0 bits (30), Expect = 6e-06
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 241 ggcgatctgccacgggttcgggctgttcgtcgcggttgccatcggcgccaacatctccgg 300
|||||||| || ||||||| ||||| || ||||| || |||| || |||||||||||
Sbjct: 248 ggcgatctctcatgggttcgccctgtttgtggcggtggctgtcggagctaacatctccgg 307
Query: 301 cggccacgtgaaccctgccgtcaccttcgg 330
||| ||||| |||||||||||||| |||||
Sbjct: 308 cggacacgtcaaccctgccgtcacattcgg 337
>gb| AY130971.1 | Brassica oleracea var. botrytis tonoplast intrinsic protein
bobTIP26-2 gene, complete cds
Length = 1442
Score = 60.0 bits (30), Expect = 6e-06
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 282 tcggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||||||||||| || ||||| ||||| |||||||| ||||||
Sbjct: 224 tcggcgccaacatctccggtggacacgttaaccccgccgtcactttcggc 273
>gb| AF290619.1 |AF290619 Nicotiana glauca putative gamma TIP (MIP3) mRNA, complete cds
Length = 1016
Score = 60.0 bits (30), Expect = 6e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 257 ttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccct 316
|||||||||||||| || || || |||| || |||||||||||||||||||| || ||
Sbjct: 259 ttcgggctgttcgtggccgtctccgtcggtgctaacatctccggcggccacgttaatccc 318
Query: 317 gccgtcaccttcgg 330
||||| ||||||||
Sbjct: 319 gccgttaccttcgg 332
>gb| AF118381.1 |AF118381 Brassica napus tonoplast intrinsic protein (gamma-TIP2) mRNA,
complete cds
Length = 1020
Score = 60.0 bits (30), Expect = 6e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 257 ttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccct 316
||||| || |||||||| ||| | |||| |||||||||||||| || ||||| ||||||
Sbjct: 211 ttcggtctcttcgtcgctgtttctgtcggtgccaacatctccggtggacacgttaaccct 270
Query: 317 gccgtcaccttcgg 330
||||| ||||||||
Sbjct: 271 gccgttaccttcgg 284
>ref| XM_429115.1 | PREDICTED: Gallus gallus similar to aquaporin 5 (LOC431562),
partial mRNA
Length = 1194
Score = 58.0 bits (29), Expect = 3e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctc 177
||||||||||||||| ||||||||||||||| |||| |||||||
Sbjct: 48 cgagttcatctccactctcatcttcgtcttcatcggcctcggctc 92
>ref| XM_428856.1 | PREDICTED: Gallus gallus similar to Aquaporin 5 (LOC431305), mRNA
Length = 1233
Score = 58.0 bits (29), Expect = 3e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 133 cgagttcatctccaccctcatcttcgtcttcgccggcgtcggctc 177
||||||||||||||| ||||||||||||||| |||| |||||||
Sbjct: 48 cgagttcatctccactctcatcttcgtcttcatcggcctcggctc 92
>emb| X95950.1 |HAST7 H.annuus mRNA for aquaporin, clone SunTIP7
Length = 894
Score = 58.0 bits (29), Expect = 3e-05
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 117 tcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggct 176
||||||||||| | || ||||||||||||||| | ||||||||||||| || |||||||
Sbjct: 83 tcaaggcctacattgctgagttcatctccaccttgctcttcgtcttcgctggtgtcggct 142
Query: 177 c 177
|
Sbjct: 143 c 143
>gb| AF521135.1 | Kandelia candel tonoplast intrinsic protein (TIP) mRNA, complete
cds
Length = 1099
Score = 56.0 bits (28), Expect = 1e-04
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttcgccggcg 170
|||||||||||||||||||| || ||||| ||||||||||
Sbjct: 171 gccgagttcatctccacccttattttcgtattcgccggcg 210
Score = 52.0 bits (26), Expect = 0.002
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 285 gcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||||| || |||||||| ||||| |||||||| |||||
Sbjct: 325 gcgccaacatctcaggtggccacgttaaccccgccgtcactttcgg 370
>ref| NM_113559.3 | Arabidopsis thaliana TIP2 (TONOPLAST INTRINSIC PROTEIN 2); water
channel AT3G26520 (TIP2) mRNA, complete cds
Length = 1201
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 341 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 387
>ref| NM_188624.1 | Oryza sativa (japonica cultivar-group), Ozsa8227 predicted mRNA
Length = 756
Score = 54.0 bits (27), Expect = 4e-04
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 127 cgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgc 186
|||||||||| || || |||| || ||||||||||| ||||||||||||| ||||| ||
Sbjct: 63 cgtcgccgagctcctcctcaccttcctcttcgtcttctccggcgtcggctccgccatggc 122
Query: 187 ctacaccaaggtgagcggcggcg 209
| | ||||| || |||||||||
Sbjct: 123 cgccgccaagctgggcggcggcg 145
Score = 46.1 bits (23), Expect = 0.096
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 294 tctccggcggccacgtgaaccctgccgtcaccttcggcctcgc 336
|||||||||||||| | ||||| |||||||| ||||||||||
Sbjct: 227 tctccggcggccacatcaacccggccgtcacgctcggcctcgc 269
>ref| XM_473480.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 849
Score = 54.0 bits (27), Expect = 4e-04
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
||||||||||| |||| | ||||| ||||||||||||||||||
Sbjct: 309 catctccggcgcccacatcaacccggccgtcaccttcggcctc 351
>emb| AL606687.3 |OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
complete sequence
Length = 147806
Score = 54.0 bits (27), Expect = 4e-04
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
||||||||||| |||| | ||||| ||||||||||||||||||
Sbjct: 27476 catctccggcgcccacatcaacccggccgtcaccttcggcctc 27518
>emb| AJ243309.1 |PSA243309 Pisum sativum mRNA for putative tonoplast intrinsic protein (gene
tip1-1)
Length = 1104
Score = 54.0 bits (27), Expect = 4e-04
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 134 gagttcatctccaccctcatcttcgtcttcgccgg 168
|||||||||||||| |||||||||||||||||||
Sbjct: 151 gagttcatctccactttcatcttcgtcttcgccgg 185
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 290 aacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||| || ||||| ||||| |||||||||||||||
Sbjct: 307 aacatctccggtggacacgtcaaccccgccgtcaccttcggc 348
>gb| AY079114.1 | Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds
Length = 762
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 229 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 275
>gb| AF419613.1 |AF419613 Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds
Length = 1061
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 291 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 337
>gb| AF428341.1 |AF428341 Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds
Length = 1066
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 296 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 342
>gb| AF004393.1 |AF004393 Arabidopsis thaliana salt-stress induced tonoplast intrinsic
protein mRNA, complete cds
Length = 1072
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 303 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 349
>gb| AF342809.1 |AF342809 Zea mays tonoplast membrane integral protein ZmTIP3-2 mRNA,
complete cds
Length = 1156
Score = 54.0 bits (27), Expect = 4e-04
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
|||| |||| ||||| ||||||||||| |||||||||||||||
Sbjct: 365 caacgtctcgggcgggcacgtgaacccggccgtcaccttcggc 407
Score = 48.1 bits (24), Expect = 0.024
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 132 ccgagttcatctccaccctcatcttcgtcttcgccg 167
||||||||||| ||||| |||||||||||||||||
Sbjct: 202 ccgagttcatcgccaccgccatcttcgtcttcgccg 237
>gb| AF326508.1 |AF326508 Zea mays tonoplast membrane integral protein ZmTIP4-4 mRNA,
complete cds
Length = 955
Score = 54.0 bits (27), Expect = 4e-04
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 129 tcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccat 183
|||||||| ||||| |||| || ||||||||||||||||||| ||||| |||||
Sbjct: 159 tcgccgagctcatcctcaccttcctcttcgtcttcgccggcgttggctccgccat 213
>gb| AF326504.1 |AF326504 Zea mays tonoplast membrane integral protein ZmTIP3-1 mRNA,
complete cds
Length = 989
Score = 54.0 bits (27), Expect = 4e-04
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 289 caacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 293 caacatctcgggcgggcacgtgaacccggcggtcaccttcggc 335
Score = 48.1 bits (24), Expect = 0.024
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 132 ccgagttcatctccaccctcatcttcgtcttcgccg 167
||||||||||| ||||| |||||||||||||||||
Sbjct: 139 ccgagttcatcgccaccgccatcttcgtcttcgccg 174
>emb| BX822807.1 |CNS0A75T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB65ZD08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1010
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 279 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 325
>emb| BX822624.1 |CNS0A742 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB53ZH08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1020
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 277 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 323
>emb| BX825064.1 |CNS0A6TA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH92ZF07 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 931
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 265 ggcgctaacatttccggtggccacgtcaaccctgccgttaccttcgg 311
>emb| BX824373.1 |CNS0A6WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH44ZA10 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 887
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 108 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 154
>emb| BX824073.1 |CNS0A6T2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH1ZE06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1008
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 277 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 323
>emb| BX822975.1 |CNS0A733 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB78ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1054
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 268 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 314
>emb| BX824311.1 |CNS0A6PE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH38ZH05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 995
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 286 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 332
>emb| BX823637.1 |CNS0A6I3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS5ZE05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 960
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 100 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 146
>emb| BX823607.1 |CNS0A6MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS56ZB09 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1012
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 277 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 323
>emb| BX822968.1 |CNS0A5UC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB77ZF06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 945
Score = 54.0 bits (27), Expect = 4e-04
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 282 tcggcgccaacatctccggcggccacgtgaaccctgccgtcac 324
|||| |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 273 tcggagccaacatctccggtggccatgtgaacccagccgtcac 315
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 77 gcctttggtcgcttcgatgactccttcagcgtggcctctctcaaggcctacgtcgccgag 136
||||||||| ||| ||||| || |||||| |||| ||||| | || ||| |||| |||
Sbjct: 65 gcctttggttcctttgatgattcattcagcttggcttctctaagagcttacctcgctgag 124
Query: 137 ttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccattgcctac 190
||||||||||| | |||| || ||||| || || ||||||||||||||||||
Sbjct: 125 ttcatctccactttactctttgttttcgctggtgttggctctgccattgcctac 178
>emb| BX842163.1 |CNS09YDT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH74ZE01 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 921
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 277 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 323
>emb| BX842138.1 |CNS09YDN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS54ZD02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1062
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 277 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 323
>gb| AF133531.1 |AF133531 Mesembryanthemum crystallinum water channel protein MipI (MipI)
mRNA, complete cds
Length = 1035
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| |||||||| || || |||||||||||||| |||||||||||
Sbjct: 296 ggcgctaacatctctggtggacacgtgaaccctgctgtcaccttcgg 342
>gb| AF139814.1 |AF139814 Triticum aestivum plasma membrane intrinsic protein 1 (PIP1) mRNA,
complete cds
Length = 1283
Score = 54.0 bits (27), Expect = 4e-04
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
||||||||| |||||| | ||||| ||||||||||||||||||
Sbjct: 389 catctccgggggccacatcaacccggccgtcaccttcggcctc 431
>dbj| AB028611.1 | Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MFE16
Length = 82646
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 16069 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 16023
>gb| AF057137.1 |AF057137 Arabidopsis thaliana gamma tonoplast intrinsic protein 2 (TIP2)
mRNA, complete cds
Length = 1035
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 284 ggcgccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||| ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 282 ggcgctaacatttccggtggccacgttaaccctgccgttaccttcgg 328
>ref| XM_473420.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 783
Score = 52.0 bits (26), Expect = 0.002
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 256 gttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccc 315
||||||||| |||| |||||| ||||| |||| || |||||||||||||||| |||||
Sbjct: 189 gttcgggctcttcgccgcggtgttcatcgccgccgacgtctccggcggccacgtcaaccc 248
Query: 316 tgccgt 321
|||||
Sbjct: 249 cgccgt 254
>gb| DQ226889.1 | Boechera divaricarpa isolate SLW-D-E07 mRNA sequence
Length = 980
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 290 aacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
||||||||||| || ||||| |||||||||||||| ||||||
Sbjct: 245 aacatctccggtggacacgttaaccctgccgtcactttcggc 286
>gb| AF133532.1 |AF133532 Mesembryanthemum crystallinum water channel protein MipK (MipK)
mRNA, complete cds
Length = 1076
Score = 52.0 bits (26), Expect = 0.002
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 290 aacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcggtcag 349
||||||||||||||||| || ||||| || ||||||||||| | || | || || |||
Sbjct: 308 aacatctccggcggccatgtcaacccagctgtcaccttcggattggctgttggtggccag 367
Query: 350 atcaccatcctcac 363
||||||||||||||
Sbjct: 368 atcaccatcctcac 381
>dbj| AK070602.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023055O11, full
insert sequence
Length = 1161
Score = 52.0 bits (26), Expect = 0.002
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 256 gttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccc 315
||||||||| |||| |||||| ||||| |||| || |||||||||||||||| |||||
Sbjct: 267 gttcgggctcttcgccgcggtgttcatcgccgccgacgtctccggcggccacgtcaaccc 326
Query: 316 tgccgt 321
|||||
Sbjct: 327 cgccgt 332
>dbj| D45077.1 |CUCMP23A Cucurbita cv. Kurokawa Amakuri mRNA for MP23 precursor, complete
cds
Length = 1249
Score = 52.0 bits (26), Expect = 0.002
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 134 gagttcatctccaccctcatcttcgtcttcgccggcgtcggctctg 179
|||||||| ||||| ||||||||||||||||||||| |||||||
Sbjct: 323 gagttcatttccactttcatcttcgtcttcgccggcgaaggctctg 368
>dbj| D84669.1 | Raphanus sativus mRNA for VM23, complete sequence
Length = 1054
Score = 52.0 bits (26), Expect = 0.002
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 257 ttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccct 316
||||| || |||||||| ||| || |||| || |||||||| || || ||||| ||||||
Sbjct: 272 ttcggtctcttcgtcgctgtttccgtcggtgctaacatctctggtggtcacgttaaccct 331
Query: 317 gccgtcaccttcgg 330
||||| ||||||||
Sbjct: 332 gccgttaccttcgg 345
>gb| U92652.2 |BOU92652 Brassica oleracea var. botrytis tonoplast intrinsic protein
bobTIP26-2 mRNA, partial cds
Length = 599
Score = 50.1 bits (25), Expect = 0.006
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcggc 331
|||||||||||||| || ||||| ||||| |||||||| ||||||
Sbjct: 1 gccaacatctccggtggacacgttaaccccgccgtcactttcggc 45
>dbj| AP001550.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0431F01
Length = 143209
Score = 50.1 bits (25), Expect = 0.006
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 127 cgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggctctgccat 183
|||||||||| || || |||| || ||||||||||| ||||||||||||| |||||
Sbjct: 98273 cgtcgccgagctcctcctcaccttcctcttcgtcttctccggcgtcggctccgccat 98329
Score = 46.1 bits (23), Expect = 0.096
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 294 tctccggcggccacgtgaaccctgccgtcaccttcggcctcgc 336
|||||||||||||| | ||||| |||||||| ||||||||||
Sbjct: 98520 tctccggcggccacatcaacccggccgtcacgctcggcctcgc 98562
>gb| U43291.1 |MCU43291 Mesembryanthemum crystallinum tonoplast intrinsic protein (TIP)
mRNA, complete cds
Length = 1235
Score = 50.1 bits (25), Expect = 0.006
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 134 gagttcatctccaccctcatcttcgtcttcgccggcg 170
||||||||||||||| | |||||||||||||| ||||
Sbjct: 127 gagttcatctccaccttgatcttcgtcttcgctggcg 163
>ref| NM_129238.2 | Arabidopsis thaliana GAMMA-TIP; water channel AT2G36830 (GAMMA-TIP)
mRNA, complete cds
Length = 1058
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 293 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 336
>emb| X72581.1 |ATGTIPMR A.thaliana mRNA for tonoplast intrinsic protein gamma (gamma-TIP)
Length = 933
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 262 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 305
>emb| X63552.1 |ATGTIPARA A.thaliana gene for tonoplast intrinsic protein gamma-TIP(Ara)
Length = 1398
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 587 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 630
>gb| AY059134.1 | Arabidopsis thaliana putative aquaporin (At2g36830) mRNA, complete
cds
Length = 787
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 229 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 272
>gb| AF370172.1 | Arabidopsis thaliana putative tonoplast intrinsic protein gamma,
aquaporin (At2g36830) mRNA, complete cds
Length = 1030
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 287 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 330
>emb| X54854.1 |ATROOTSP A. thaliana mRNA for root-specific gene
Length = 993
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 271 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 314
>gb| AC006922.7 | Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete
sequence
Length = 134151
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 6897 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 6940
>emb| BX819301.1 |CNS0AA93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB66ZE04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 996
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 268 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 311
>emb| BX819066.1 |CNS0AA99 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB42ZA01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1009
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 258 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 301
>emb| BX818765.1 |CNS0AA8G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB10ZD11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 950
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 273 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 316
>emb| BX819619.1 |CNS0A8TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZA10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 885
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 274 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 317
>emb| BX819585.1 |CNS0A8ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB91ZD10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 975
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 274 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 317
>emb| BX819242.1 |CNS0A8YI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB5ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 904
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 272 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 315
>emb| BX818836.1 |CNS0A8V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB18ZB03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 995
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 273 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 316
>emb| BX818785.1 |CNS0A8WQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB13ZC03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 973
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 272 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 315
>emb| BX820166.1 |CNS0A8IR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS84ZH08 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 961
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 263 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 306
>gb| AY087558.1 | Arabidopsis thaliana clone 36633 mRNA, complete sequence
Length = 1042
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 293 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 336
>gb| AF133533.1 |AF133533 Mesembryanthemum crystallinum water channel protein MipL (MipL)
mRNA, partial cds
Length = 768
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 341 ggcggtcagatcaccatcctcaccggcctcttctactgggttgc 384
||||| || |||||| ||||||| |||||| |||||||||||||
Sbjct: 145 ggcggccacatcaccgtcctcactggcctcatctactgggttgc 188
>gb| M84344.1 |ATHGTIP Arabidopsis thaliana tonoplast intrinsic protein (gamma-TIP) gene,
complete cds
Length = 1398
Score = 48.1 bits (24), Expect = 0.024
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 287 gccaacatctccggcggccacgtgaaccctgccgtcaccttcgg 330
||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 587 gccaacatctctggtggacacgttaaccctgccgtcactttcgg 630
>gb| BT016583.1 | Zea mays clone Contig416 mRNA sequence
Length = 1348
Score = 46.1 bits (23), Expect = 0.096
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 368 catctcggggggccacatcaaccccgccgtcaccttcggcctc 410
>gb| AY243801.1 | Zea mays aquaporin (PIP2-1) mRNA, complete cds
Length = 1133
Score = 46.1 bits (23), Expect = 0.096
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 316 catctcggggggccacatcaaccccgccgtcaccttcggcctc 358
>emb| AJ843991.1 | Plantago major partial mRNA for aquaporin 1 (aqp1 gene)
Length = 871
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 350 atcaccatcctcaccggcctcttctactgggttgc 384
||||||||| |||| ||||||||||||||| ||||
Sbjct: 240 atcaccatcatcactggcctcttctactggattgc 274
Score = 40.1 bits (20), Expect = 5.9
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 153 tcttcgtcttcgccggcgtcggctctgccattgcctacaccaag 196
||||||| ||||| || || ||||||||||| ||||||| ||||
Sbjct: 43 tcttcgttttcgcgggtgttggctctgccatagcctacaacaag 86
>gb| AF326507.1 |AF326507 Zea mays tonoplast membrane integral protein ZmTIP4-3 mRNA,
complete cds
Length = 1045
Score = 46.1 bits (23), Expect = 0.096
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 291 acatctccggcggccacgtgaaccctgccgt 321
||||||||||||||||||| ||||| |||||
Sbjct: 329 acatctccggcggccacgtcaacccggccgt 359
>gb| AF326492.1 |AF326492 Zea mays plasma membrane integral protein ZmPIP2-2 mRNA, complete
cds
Length = 1268
Score = 46.1 bits (23), Expect = 0.096
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 440 catctcggggggccacatcaacccggccgtcaccttcggcctc 482
>gb| AF326491.1 |AF326491 Zea mays plasma membrane integral protein ZmPIP2-1 mRNA, complete
cds
Length = 1171
Score = 46.1 bits (23), Expect = 0.096
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcggcctc 334
|||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 387 catctcggggggccacatcaaccccgccgtcaccttcggcctc 429
>gb| AF139816.1 |AF139816 Triticum aestivum plasma membrane intrinsic protein 3 (PIP3) mRNA,
complete cds
Length = 1271
Score = 46.1 bits (23), Expect = 0.096
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcgg 330
|||||||||||||||| | ||||| || |||||||||||
Sbjct: 412 catctccggcggccacatcaaccccgcggtcaccttcgg 450
>dbj| AP003569.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0425F05
Length = 162858
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 291 acatctccggcggccacgtgaaccctgccgtcacc 325
|||||||||||| |||| ||||||| |||||||||
Sbjct: 97311 acatctccggcgcccacatgaacccggccgtcacc 97277
>dbj| AK112022.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D01, full
insert sequence
Length = 1524
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 291 acatctccggcggccacgtgaaccctgccgtcacc 325
|||||||||||| |||| ||||||| |||||||||
Sbjct: 477 acatctccggcgcccacatgaacccggccgtcacc 511
>dbj| AK111839.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023140M01, full
insert sequence
Length = 2364
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 291 acatctccggcggccacgtgaaccctgccgtcacc 325
|||||||||||| |||| ||||||| |||||||||
Sbjct: 630 acatctccggcgcccacatgaacccggccgtcacc 664
>dbj| AK104037.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F07, full
insert sequence
Length = 1513
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 291 acatctccggcggccacgtgaaccctgccgtcacc 325
|||||||||||| |||| ||||||| |||||||||
Sbjct: 466 acatctccggcgcccacatgaacccggccgtcacc 500
>dbj| AK072966.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023144P06, full
insert sequence
Length = 1447
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 291 acatctccggcggccacgtgaaccctgccgtcacc 325
|||||||||||| |||| ||||||| |||||||||
Sbjct: 476 acatctccggcgcccacatgaacccggccgtcacc 510
>dbj| AB009308.2 | Hordeum vulgare HvPIP1;3 mRNA, complete cds
Length = 1285
Score = 46.1 bits (23), Expect = 0.096
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcgg 330
|||||||||||||||| | ||||| || |||||||||||
Sbjct: 416 catctccggcggccacatcaacccggcggtcaccttcgg 454
>gb| AF020793.1 |AF020793 Medicago sativa tonoplast intrinsic protein homolog MSMCP1 (msmcp1)
mRNA, complete cds
Length = 1103
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 134 gagttcatctccaccctcatcttcgtcttcgccgg 168
||||||||||| ||| ||||||| |||||||||||
Sbjct: 141 gagttcatctcaaccttcatctttgtcttcgccgg 175
>gb| L36881.1 |ALFMCP Medicago sativa membrane channel protein mRNA, complete cds
Length = 1066
Score = 46.1 bits (23), Expect = 0.096
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 134 gagttcatctccaccctcatcttcgtcttcgccgg 168
||||||||||| ||| ||||||| |||||||||||
Sbjct: 141 gagttcatctcaaccttcatctttgtcttcgccgg 175
>gb| AF366564.1 | Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds
Length = 1248
Score = 46.1 bits (23), Expect = 0.096
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcaccttcgg 330
|||||||||||||||| | ||||| || |||||||||||
Sbjct: 401 catctccggcggccacatcaaccccgcggtcaccttcgg 439
>ref| NM_187411.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 921
Score = 44.1 bits (22), Expect = 0.38
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 350 atcaccatcctcaccggcctct 371
||||||||||||||||||||||
Sbjct: 436 atcaccatcctcaccggcctct 457
>gb| AE016795.2 | Vibrio vulnificus CMCP6 chromosome I complete sequence
Length = 3281944
Score = 44.1 bits (22), Expect = 0.38
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 296 tccggcggccacgtgaaccctgccgtcacc 325
|||||| ||||| |||||||||||||||||
Sbjct: 2007356 tccggctgccacttgaaccctgccgtcacc 2007327
>emb| Y08161.1 |NTAQP1 N.tabacum mRNA for aquaporin 1
Length = 978
Score = 44.1 bits (22), Expect = 0.38
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 257 ttcgggctgttcgtcgcggttgccatcggcgccaacatctccggcggccacgtgaaccct 316
||||||||||| || || || || |||| || ||||||||||||||||| || || ||
Sbjct: 259 ttcgggctgtttgtggccgtctccgtcggtgctaacatctccggcggccatgttaatccc 318
Query: 317 gccgtcaccttcgg 330
||||| ||||||||
Sbjct: 319 gccgttaccttcgg 332
>dbj| BA000037.2 | Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
Length = 3354505
Score = 44.1 bits (22), Expect = 0.38
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 296 tccggcggccacgtgaaccctgccgtcacc 325
|||||| ||||| |||||||||||||||||
Sbjct: 2434535 tccggctgccacttgaaccctgccgtcacc 2434564
>dbj| AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 44.1 bits (22), Expect = 0.38
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 350 atcaccatcctcaccggcctct 371
||||||||||||||||||||||
Sbjct: 19919802 atcaccatcctcaccggcctct 19919781
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 279 ccatcggcgccaacatctcc 298
||||||||||||||||||||
Sbjct: 9528955 ccatcggcgccaacatctcc 9528936
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttcgtcttcgccggcgtcg 173
||||||||||||||||||||
Sbjct: 466805 cttcgtcttcgccggcgtcg 466824
>ref| NM_001009273.1 | Ovis aries aquaporin 5 (AQP5), mRNA
Length = 815
Score = 44.1 bits (22), Expect = 0.38
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttcgccggcgtcggctc 177
|||||||||||||||||||| |||| |||||||
Sbjct: 71 ccaccctcatcttcgtcttcttcggcctcggctc 104
>gb| AY177613.1 | Ovis aries aquaporin 5 (AQP5) mRNA, complete cds
Length = 815
Score = 44.1 bits (22), Expect = 0.38
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttcgccggcgtcggctc 177
|||||||||||||||||||| |||| |||||||
Sbjct: 71 ccaccctcatcttcgtcttcttcggcctcggctc 104
>dbj| AP005103.5 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0036M16
Length = 158880
Score = 44.1 bits (22), Expect = 0.38
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 350 atcaccatcctcaccggcctct 371
||||||||||||||||||||||
Sbjct: 84452 atcaccatcctcaccggcctct 84431
>ref| XM_844922.1 | PREDICTED: Canis familiaris hypothetical protein LOC608029
(LOC608029), mRNA
Length = 969
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 328 cggcctcgcgctcggcggtca 348
|||||||||||||||||||||
Sbjct: 26 cggcctcgcgctcggcggtca 46
>emb| AL139092.12 | Human DNA sequence from clone RP11-420G6 on chromosome 6 Contains the
gene for werners helicase interacting protein (WHIP)
(RUVBL), the SERPINB1 gene for serine (or cysteine)
proteinase inhibitor clade B (ovalbumin) member 1, a
putative novel gene and the 3' end of a putative novel
gene, complete sequence
Length = 168147
Score = 42.1 bits (21), Expect = 1.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 20 ctctcatcctcccagcttggt 40
|||||||||||||||||||||
Sbjct: 110449 ctctcatcctcccagcttggt 110429
>emb| Y10637.1 |DNAQP2X1 D.novemcinctus aqp2 gene, exon 1, partial
Length = 328
Score = 42.1 bits (21), Expect = 1.5
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 131 gccgagttcatctccaccctcatcttcgtcttc 163
||||||||| | ||||||||||||||||||||
Sbjct: 29 gccgagttcctggccaccctcatcttcgtcttc 61
>emb| BX294146.1 | Pirellula sp. strain 1 complete genome; segment 14/24
Length = 324450
Score = 42.1 bits (21), Expect = 1.5
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 149 ctcatcttcgtcttcgccggcgtcg 173
|||||||||||||||||| ||||||
Sbjct: 124610 ctcatcttcgtcttcgcccgcgtcg 124634
>emb| AJ289696.1 |POC289696 Posidonia oceanica partial mRNA for putative aquaporin (aq1 gene)
Length = 428
Score = 42.1 bits (21), Expect = 1.5
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 292 catctccggcggccacgtgaaccctgccgtcac 324
|||||||||||| || ||||||||||||||||
Sbjct: 1 catctccggcggtcatttgaaccctgccgtcac 33
>emb| X57073.1 |SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid reductoisomerase
Length = 2050
Score = 42.1 bits (21), Expect = 1.5
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 3 cagcgacaacatttcatctctcatcctcc 31
|||||||||||||| |||||||||||||
Sbjct: 42 cagcgacaacattttctctctcatcctcc 70
>gb| AY103628.1 | Zea mays PCO109231 mRNA sequence
Length = 1907
Score = 42.1 bits (21), Expect = 1.5
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 149 ctcatcttcgtcttcgccggcgtcg 173
|||||||||||| ||||||||||||
Sbjct: 1495 ctcatcttcgtcctcgccggcgtcg 1519
>gb| AY378170.1 | Cichorium intybus aquaporine-like mRNA, partial sequence
Length = 415
Score = 40.1 bits (20), Expect = 5.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 145 caccctcatcttcgtcttcgccgg 168
||||||||||||||| ||||||||
Sbjct: 107 caccctcatcttcgtgttcgccgg 130
>ref| NM_117838.2 | Arabidopsis thaliana DELTA-TIP2/TIP2;2; water channel AT4G17340
(DELTA-TIP2/TIP2;2) mRNA, complete cds
Length = 977
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgt 321
|||||||||||||||||| ||| | ||||| |||||
Sbjct: 287 cgccaacatctccggcggacaccttaaccccgccgt 322
>gb| AE010414.1 | Methanopyrus kandleri AV19 section 113 of 157 of the complete genome
Length = 12092
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 117 tcaaggcctacgtcgccgag 136
||||||||||||||||||||
Sbjct: 6648 tcaaggcctacgtcgccgag 6629
>gb| CP000152.1 | Burkholderia sp. 383 chromosome 2, complete sequence
Length = 3587082
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 250 ccacgggttcgggctgttcg 269
||||||||||||||||||||
Sbjct: 1800010 ccacgggttcgggctgttcg 1799991
>ref| XM_476391.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 1468
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttcgtcttcgccggcgtcg 173
||||||||||||||||||||
Sbjct: 520 cttcgtcttcgccggcgtcg 539
>ref| NM_012779.1 | Rattus norvegicus aquaporin 5 (Aqp5), mRNA
Length = 1426
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 168 ccaccctcatcttcgtcttc 187
>gb| BT019863.1 | Synthetic construct Homo sapiens aquaporin 5 mRNA, partial cds
Length = 798
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 59 ccaccctcatcttcgtcttc 78
>gb| BC078904.1 | Rattus norvegicus aquaporin 5, mRNA (cDNA clone IMAGE:7124184),
partial cds
Length = 1442
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 162 ccaccctcatcttcgtcttc 181
>ref| NM_001651.1 | Homo sapiens aquaporin 5 (AQP5), mRNA
Length = 1316
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 577 ccaccctcatcttcgtcttc 596
>gb| DQ164589.1 | Hepatitis C virus isolate BE00-17-3630 polyprotein gene, partial
cds
Length = 543
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 355 catcctcaccggcctcttct 374
||||||||||||||||||||
Sbjct: 460 catcctcaccggcctcttct 479
>gb| DQ164581.1 | Hepatitis C virus isolate BE01-17-3630 polyprotein gene, partial
cds
Length = 543
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 355 catcctcaccggcctcttct 374
||||||||||||||||||||
Sbjct: 460 catcctcaccggcctcttct 479
>gb| BC034356.1 | Homo sapiens aquaporin 5, mRNA (cDNA clone IMAGE:4755120), partial
cds
Length = 1417
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 680 ccaccctcatcttcgtcttc 699
>ref| XM_001003734.1 | PREDICTED: Mus musculus aquaporin 5 (Aqp5), mRNA
Length = 1769
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 521 ccaccctcatcttcgtcttc 540
>gb| AY243802.1 | Zea mays aquaporin (PIP2-5) mRNA, complete cds
Length = 1104
Score = 40.1 bits (20), Expect = 5.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 311 aaccctgccgtcaccttcggcctc 334
||||| ||||||||||||||||||
Sbjct: 322 aacccggccgtcaccttcggcctc 345
>emb| AM039952.1 | Xanthomonas campestris pv. vesicatoria complete genome
Length = 5178466
Score = 40.1 bits (20), Expect = 5.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 322 caccttcggcctcgcgctcggcgg 345
||||||||| ||||||||||||||
Sbjct: 2601022 caccttcggactcgcgctcggcgg 2601045
Score = 40.1 bits (20), Expect = 5.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 325 cttcggcctcgcgctcggcggtca 348
||||| ||||||||||||||||||
Sbjct: 1206197 cttcgtcctcgcgctcggcggtca 1206220
>ref| XM_743501.1 | Aspergillus fumigatus Af293 MFS transporter (Afu3g02720) partial
mRNA
Length = 1734
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 315 ctgccgtcaccttcggcctc 334
||||||||||||||||||||
Sbjct: 863 ctgccgtcaccttcggcctc 882
>gb| AC126688.4 | Mus musculus BAC clone RP23-152P20 from chromosome 7, complete
sequence
Length = 205673
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 agccaccatgccaggctcca 74
||||||||||||||||||||
Sbjct: 6198 agccaccatgccaggctcca 6217
>emb| CR688490.2 |CNS0FU6U Tetraodon nigroviridis full-length cDNA
Length = 1604
Score = 40.1 bits (20), Expect = 5.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 298 cggcggccacgtgaaccctgccgtcaccttcg 329
|||||||||| | ||||| |||||||||||||
Sbjct: 600 cggcggccacatcaaccccgccgtcaccttcg 631
>emb| CR690005.1 |CNS0FVCX Tetraodon nigroviridis full-length cDNA
Length = 1987
Score = 40.1 bits (20), Expect = 5.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 298 cggcggccacgtgaaccctgccgtcaccttcg 329
|||||||||| | ||||| |||||||||||||
Sbjct: 589 cggcggccacatcaaccccgccgtcaccttcg 620
>gb| AC144721.18 | Medicago truncatula clone mth2-11o23, complete sequence
Length = 135959
Score = 40.1 bits (20), Expect = 5.9
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 347 cagatcaccatcctcaccggcctcttctactgggttgcgcagct 390
||||| ||||||||||| || ||||||||||| |||| |||||
Sbjct: 71582 cagattaccatcctcactggtatcttctactggattgctcagct 71539
>ref| NM_009701.3 | Mus musculus aquaporin 5 (Aqp5), mRNA
Length = 1796
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 552 ccaccctcatcttcgtcttc 571
>emb| Z98742.5 |HS128O3 Human DNA sequence from clone RP1-128O3 on chromosome 6q21-22 Contains
the 5' end of the SNX3 gene for sorting nexin 3, a
pseudogene similar to hypothetical protein HSPC016, a
novel gene, and the 5' end of the LACE1 gene for
lactation elevated 1 a ribosomal protein L36a pseudogene
(RPL36A) and four CpG islands, complete sequence
Length = 119350
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 agccaccatgccaggctcca 74
||||||||||||||||||||
Sbjct: 67971 agccaccatgccaggctcca 67990
>gb| CP000316.1 | Polaromonas sp. JS666, complete genome
Length = 5200264
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 395 ggtgccatcgtcggcgcctt 414
||||||||||||||||||||
Sbjct: 3143162 ggtgccatcgtcggcgcctt 3143181
>emb| Z97343.1 |ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8
Length = 207674
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgt 321
|||||||||||||||||| ||| | ||||| |||||
Sbjct: 64310 cgccaacatctccggcggacaccttaaccccgccgt 64345
>emb| Z29946.1 |TRGTIPLP T.repens (Huia) mRNA for gamma-Tip-like protein
Length = 991
Score = 40.1 bits (20), Expect = 5.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 134 gagttcatctccaccctcatcttcgtcttcgc 165
||||| ||||| ||| ||||||||||||||||
Sbjct: 66 gagttaatctcaaccttcatcttcgtcttcgc 97
>emb| X95951.1 |HAST18 H.annuus mRNA for aquaporin, clone SunTIP18
Length = 980
Score = 40.1 bits (20), Expect = 5.9
Identities = 83/104 (79%)
Strand = Plus / Plus
Query: 290 aacatctccggcggccacgtgaaccctgccgtcaccttcggcctcgcgctcggcggtcag 349
|||||||| ||||| || |||||||| || |||||||| || | || | ||||| |||
Sbjct: 258 aacatctctggcggtcatgtgaacccagctgtcacctttggattggccgttggcggccag 317
Query: 350 atcaccatcctcaccggcctcttctactgggttgcgcagctcct 393
||||||||||| || ||| | || |||||| |||| || |||||
Sbjct: 318 atcaccatcctaacgggcttgttttactggattgctcaactcct 361
Score = 40.1 bits (20), Expect = 5.9
Identities = 53/64 (82%)
Strand = Plus / Plus
Query: 117 tcaaggcctacgtcgccgagttcatctccaccctcatcttcgtcttcgccggcgtcggct 176
|||| |||||| | || |||||||||||||| | ||||||||||||| || ||||| |
Sbjct: 85 tcaaagcctacattgctgagttcatctccactttgctcttcgtcttcgcgggtgtcggtt 144
Query: 177 ctgc 180
||||
Sbjct: 145 ctgc 148
>emb| X77957.1 |CVCIC C.viridis mRNA for CIC
Length = 357
Score = 40.1 bits (20), Expect = 5.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 311 aaccctgccgtcaccttcggcctc 334
|||||||||||||||| |||||||
Sbjct: 1 aaccctgccgtcacctgcggcctc 24
>emb| CR555306.1 | Azoarcus sp. EbN1 complete genome
Length = 4296230
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 256 gttcgggctgttcgtcgcgg 275
||||||||||||||||||||
Sbjct: 3847784 gttcgggctgttcgtcgcgg 3847803
>gb| BC032946.1 | Homo sapiens aquaporin 5, mRNA (cDNA clone MGC:33163
IMAGE:5269384), complete cds
Length = 1388
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 131 ccaccctcatcttcgtcttc 150
>emb| AL161546.2 |ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46
Length = 198788
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgt 321
|||||||||||||||||| ||| | ||||| |||||
Sbjct: 53675 cgccaacatctccggcggacaccttaaccccgccgt 53710
>gb| AC104024.8 | Homo sapiens chromosome 17, clone RP11-416I2, complete sequence
Length = 97645
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 24 catcctcccagcttggtttt 43
||||||||||||||||||||
Sbjct: 32026 catcctcccagcttggtttt 32007
>gb| AC101690.7 | Mus musculus chromosome 7, clone RP23-218E6, complete sequence
Length = 229964
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 agccaccatgccaggctcca 74
||||||||||||||||||||
Sbjct: 205484 agccaccatgccaggctcca 205503
>gb| AC079111.7 | Homo sapiens chromosome 17, clone RP11-367G9, complete sequence
Length = 163410
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 catcctcccagcttggtttt 43
||||||||||||||||||||
Sbjct: 1385 catcctcccagcttggtttt 1404
>emb| AJ829443.3 | Gallus gallus partial aquaporin 5 homologue (AQP5 gene)
Length = 1405
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 142 ctccaccctcatcttcgtcttcgccggcgtcggctc 177
|||||| ||||||||||||||| |||| |||||||
Sbjct: 1 ctccactctcatcttcgtcttcatcggcctcggctc 36
>gb| CP000301.1 | Rhodopseudomonas palustris BisB18, complete genome
Length = 5513844
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 283 cggcgccaacatctccggcg 302
||||||||||||||||||||
Sbjct: 531765 cggcgccaacatctccggcg 531784
>dbj| AP008229.1 | Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
Length = 4940217
Score = 40.1 bits (20), Expect = 5.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 325 cttcggcctcgcgctcggcggtca 348
||||| ||||||||||||||||||
Sbjct: 3918338 cttcgtcctcgcgctcggcggtca 3918315
>emb| CR625526.1 | full-length cDNA clone CS0DI081YK01 of Placenta Cot 25-normalized
of Homo sapiens (human)
Length = 1317
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 109 ccaccctcatcttcgtcttc 128
>emb| CR601707.1 | full-length cDNA clone CS0DF008YG01 of Fetal brain of Homo sapiens
(human)
Length = 1420
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 207 ccaccctcatcttcgtcttc 226
>gb| AE012337.1 | Xanthomonas campestris pv. campestris str. ATCC 33913, section 245
of 460 of the complete genome
Length = 11412
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 327 tcggcctcgcgctcggcggt 346
||||||||||||||||||||
Sbjct: 4836 tcggcctcgcgctcggcggt 4855
>gb| CP000133.1 | Rhizobium etli CFN 42, complete genome
Length = 4381608
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 325 cttcggcctcgcgctcggcg 344
||||||||||||||||||||
Sbjct: 3662686 cttcggcctcgcgctcggcg 3662705
>gb| AC157522.2 | Pan troglodytes BAC clone CH251-520I13 from chromosome unknown,
complete sequence
Length = 221631
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 agccaccatgccaggctcca 74
||||||||||||||||||||
Sbjct: 49101 agccaccatgccaggctcca 49120
>emb| CR542022.1 | Homo sapiens full open reading frame cDNA clone RZPDo834E0735D for
gene AQP5, aquaporin 5; complete cds, without stopcodon
Length = 795
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 59 ccaccctcatcttcgtcttc 78
>emb| CR541989.1 | Homo sapiens full open reading frame cDNA clone RZPDo834D0635D for
gene AQP5, aquaporin 5; complete cds, incl. stopcodon
Length = 798
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 59 ccaccctcatcttcgtcttc 78
>gb| AY056063.1 | Arabidopsis thaliana AT4g17340/dl4705w mRNA, complete cds
Length = 753
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgt 321
|||||||||||||||||| ||| | ||||| |||||
Sbjct: 222 cgccaacatctccggcggacaccttaaccccgccgt 257
>dbj| AK009302.1 | Mus musculus adult male tongue cDNA, RIKEN full-length enriched
library, clone:2310011H11 product:aquaporin 5, full
insert sequence
Length = 1428
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 ccaccctcatcttcgtcttc 163
||||||||||||||||||||
Sbjct: 188 ccaccctcatcttcgtcttc 207
>gb| CP000050.1 | Xanthomonas campestris pv. campestris str. 8004, complete genome
Length = 5148708
Score = 40.1 bits (20), Expect = 5.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 322 caccttcggcctcgcgctcggcgg 345
||||||||| ||||||||||||||
Sbjct: 2465736 caccttcggactcgcgctcggcgg 2465759
Score = 40.1 bits (20), Expect = 5.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 327 tcggcctcgcgctcggcggt 346
||||||||||||||||||||
Sbjct: 2210982 tcggcctcgcgctcggcggt 2210963
>gb| AF367283.1 |AF367283 Arabidopsis thaliana AT4g17340/dl4705w mRNA, complete cds
Length = 972
Score = 40.1 bits (20), Expect = 5.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 286 cgccaacatctccggcggccacgtgaaccctgccgt 321
|||||||||||||||||| ||| | ||||| |||||
Sbjct: 284 cgccaacatctccggcggacaccttaaccccgccgt 319
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,221,831
Number of Sequences: 3902068
Number of extensions: 3221831
Number of successful extensions: 79227
Number of sequences better than 10.0: 279
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76661
Number of HSP's gapped (non-prelim): 2557
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)