Clone Name | bart50f03 |
---|---|
Clone Library Name | barley_pub |
>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 501 Score = 84.3 bits (207), Expect = 1e-16 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%) Frame = +2 Query: 194 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 370 +C+ K + +Q A+D+ACG G DC+ + C++P VVAH +YA N+YYQK Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGK 419 Query: 371 MGATCDFMGVATLTGADPSAGSLQYP 448 +CDF GVAT+T DPS G+ +P Sbjct: 420 ASGSCDFKGVATVTTTDPSRGTCVFP 445
>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 402 Score = 83.2 bits (204), Expect = 3e-16 Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%) Frame = +2 Query: 194 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 370 YC+ + +Q A+D+ACG G ++C++I C+QP +V H S+A NSYYQK Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 331 Query: 371 MGATCDFMGVATLTGADPSAGSLQYPAQR 457 +CDF GVA +T DPS GS +P + Sbjct: 332 ASGSCDFKGVAMITTTDPSHGSCIFPGSK 360
>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 461 Score = 82.0 bits (201), Expect = 7e-16 Identities = 39/84 (46%), Positives = 47/84 (55%) Frame = +2 Query: 194 YCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGM 373 +CV K AN +Q I+YACG DC I S G CF P S+ AH SY N+YYQ N Sbjct: 377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHT 435 Query: 374 GATCDFMGVATLTGADPSAGSLQY 445 CDF G +T +DPS G +Y Sbjct: 436 DLACDFKGTGIVTSSDPSYGGCKY 459
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 77.8 bits (190), Expect = 1e-14 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%) Frame = +2 Query: 188 AMYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKN 364 +M+CV K+DA+ + +++ACG+G A+C I PC+ P V +H S+A N YYQK Sbjct: 360 SMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKM 419 Query: 365 AGMGATCDFMGVATLTGADPSAGSLQY 445 G TCDF G A T DPS + Y Sbjct: 420 KSAGGTCDFDGTAITTTRDPSYRTCAY 446
>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Anther-specific protein A6) Length = 478 Score = 52.8 bits (125), Expect = 4e-07 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +2 Query: 191 MYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 367 ++CV AN +++ + AC + C + C++P+S+ H SYA NSY+ + Sbjct: 388 VWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFR 447 Query: 368 GMGATCDFMGVATLTGADPSAGSLQYPA 451 C F G+A T +P ++P+ Sbjct: 448 NQSIQCFFNGLAHETTTNPGNDRCKFPS 475
>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 484 Score = 50.4 bits (119), Expect = 2e-06 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%) Frame = +2 Query: 194 YCVCKSDANPVAMQ--KAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 367 +C+ +AN Q ++ YAC ADCT + C +++ + SYA NSYYQ + Sbjct: 365 WCILAPNANLQDPQLGPSVSYACDH-ADCTSLGYGSSCGN-LNLAQNVSYAFNSYYQVSN 422 Query: 368 GMGATCDFMGVATLTGADPSAGSLQY 445 + + C F G++ ++ DPS GS ++ Sbjct: 423 QLDSACKFPGLSIVSTRDPSVGSCKF 448
>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 477 Score = 49.3 bits (116), Expect = 5e-06 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Frame = +2 Query: 194 YCVCKSDA--NPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 367 +CV K + + + A+ YAC G DCT + C + + SYA NSYYQ Sbjct: 362 WCVMKPNVRLDDPQVAPAVSYACSLG-DCTSLGVGTSCAN-LDGKQNISYAFNSYYQIQD 419 Query: 368 GMGATCDFMGVATLTGADPSAGSLQYP 448 + C F ++ +T DPS G+ ++P Sbjct: 420 QLDTACKFPNISEVTKTDPSTGTCRFP 446
>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal| development 1) Length = 549 Score = 42.4 bits (98), Expect = 6e-04 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Frame = +2 Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 346 S ++ CV + + DY C K DC+ I +N + P S+ N Sbjct: 373 SSSLKCVVADNVSTDDYSDLFDYVCAK-IDCSGINANATTGDYGAYSPCGAKDKLSFVLN 431 Query: 347 SYYQKNAGMGATCDFMGVATLTGADPSAGSLQY--PAQRSGVG 469 YY++ + CDF G A+L A ++ Y A SG+G Sbjct: 432 LYYEEQNESKSACDFSGSASLQSASTASSCAAYLSSAGVSGLG 474
>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)| Length = 546 Score = 40.4 bits (93), Expect = 0.002 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Frame = +2 Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 346 S ++ CV + Y C K DC I +NG + P S+ N Sbjct: 375 SASLKCVVDDKVDSDDYSDLFSYICAK-IDCDGINANGTTGEYGAYSPCHSKDKLSFVMN 433 Query: 347 SYYQKNAGMGATCDFMGVATLTGADPSAGSLQY--PAQRSGVG 469 YY++N + CDF G A+L A ++ Y A SG+G Sbjct: 434 LYYEQNKESKSACDFGGSASLQSAKTASSCSAYLSSAGSSGLG 476
>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor| (Glycoprotein GP115) Length = 559 Score = 38.9 bits (89), Expect = 0.007 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = +2 Query: 197 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACNSYYQK 361 CV D + + ++ C + DC+ I++NG + + S+ N YY+K Sbjct: 379 CVVSDDVDSDDYETLFNWICNE-VDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEK 437 Query: 362 NAGMGATCDFMGVATLTGADPSA 430 + G + C F G ATL A A Sbjct: 438 SGGSKSDCSFSGSATLQTATTQA 460
>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)| Length = 548 Score = 34.7 bits (78), Expect = 0.13 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Frame = +2 Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YAC 343 S ++ CV D + CG DC+ I+++G + V + CS Y Sbjct: 385 SKSLECVVADDVDKEDYGDLFGQVCGY-IDCSAISADGSKGE-YGVASFCSDKDRLSYVL 442 Query: 344 NSYYQKNAGMGATCDFMGVATLTGADPSAGS 436 N YY + CDF G A++ ++GS Sbjct: 443 NQYYLDQDKKSSACDFKGSASINSKASASGS 473
>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor| Length = 542 Score = 33.9 bits (76), Expect = 0.22 Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 6/86 (6%) Frame = +2 Query: 197 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YACNSYYQ 358 CV D + Y C + C IT+NG ++C Y ++YY Sbjct: 376 CVINDDVSSDDYSDLFSYVCNE-ISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYYS 434 Query: 359 KNAGMGATCDFMGVATLTGADPSAGS 436 CDF G ATL A + G+ Sbjct: 435 AKGD----CDFSGSATLVSASSATGT 456
>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated| protein 10.8) (High sulfur keratin-associated protein 10.8) (Keratin-associated protein 18-8) (Keratin-associated protein 18.8) Length = 259 Score = 32.7 bits (73), Expect = 0.48 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = +2 Query: 200 VCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGMGA 379 +C ++P Q + AC + C Q C +PI V CS A + QK++ A Sbjct: 137 ICSGASSPCCQQSSCQSACCTFSPCQQACCVPICCKPICCVPVCSGASSLCCQKSSCQPA 196 Query: 380 TC 385 C Sbjct: 197 CC 198
>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal| development 2) Length = 549 Score = 32.3 bits (72), Expect = 0.63 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 5/81 (6%) Frame = +2 Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACN 346 S + CV D + CG DC I++NG F S SY N Sbjct: 385 SQSFNCVVADDVDAEDYSTLFGEVCGY-IDCGDISANGNTGEYGGFSFCSDKDRLSYVLN 443 Query: 347 SYYQKNAGMGATCDFMGVATL 409 YY CDF G A++ Sbjct: 444 QYYHDQNERADACDFAGSASI 464
>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor| Length = 4007 Score = 30.4 bits (67), Expect = 2.4 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Frame = +2 Query: 197 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQP-ISVVAHCSYACNSYYQKNAGM 373 C+C Q + CGKG ++ +G C + +S CSY YQ Sbjct: 242 CICDRGEVRCHKQACLPLRCGKGQ--SRARRHGQCCEECVSPAGSCSYDGVVRYQDEMWK 299 Query: 374 GATCDF 391 G+ C+F Sbjct: 300 GSACEF 305
>NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor| Length = 1278 Score = 29.6 bits (65), Expect = 4.1 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +2 Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITS 289 ++AMY C+ P + KA+ CGK AD T+ Sbjct: 153 ANAMYNACRDVEAPSSNDKALGLLCGKDADACNATN 188
>DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide| dehydrogenase) Length = 479 Score = 29.3 bits (64), Expect = 5.3 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 7/78 (8%) Frame = +1 Query: 10 TPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALARHVRR--- 180 T + PR A AL +E+ + NG ++G AL V + Sbjct: 210 TVVEFAPRCAPTLDSDVTDALVGALKRNGEDEVPMTGIEGVNGTNNGSIALTLEVEQAGG 269 Query: 181 ----LRCDVLRVQVGREP 222 L CD L V VGR P Sbjct: 270 QAETLHCDALLVSVGRRP 287
>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated| protein 10.5) (High sulfur keratin-associated protein 10.5) (Keratin-associated protein 18-5) (Keratin-associated protein 18.5) Length = 271 Score = 29.3 bits (64), Expect = 5.3 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Frame = +2 Query: 203 CKSDANPVAMQKAIDYACGKGADCTQ-----ITSNGPCFQPISVVAHCSYACNSYYQKNA 367 C D++ + C + C Q + CF+PI V CS A S Q+++ Sbjct: 145 CSEDSSSCCQHSSCQPTCCTSSPCQQSCYVPVCCKPVCFKPICCVPVCSGASTSCCQQSS 204 Query: 368 GMGATC 385 A C Sbjct: 205 CQPACC 210
>VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein 2)| (Loop-tail-associated protein) (Loop-tail protein 1) Length = 521 Score = 29.3 bits (64), Expect = 5.3 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 Query: 163 QEHEDQRSRHCSKQRDGAR 107 ++H D+R RH SK RDG+R Sbjct: 21 RKHRDRRDRHRSKSRDGSR 39
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 5/67 (7%) Frame = +2 Query: 200 VCKSDANPVAMQKAIDYACGKGADCTQ-----ITSNGPCFQPISVVAHCSYACNSYYQKN 364 VC D++ Q + AC + C Q + C +P+ V CS A + Q++ Sbjct: 242 VCSEDSSSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCKPVGSVPICSGASSLCCQQS 301 Query: 365 AGMGATC 385 + A C Sbjct: 302 SCQPACC 308
>HXD1_HUMAN (Q9GZZ0) Homeobox protein Hox-D1| Length = 328 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = +2 Query: 203 CKSDANPVAMQKAIDYACGKGA--DCTQITSNGPCFQPISVVAHCS 334 C+SDA PVA+Q A G GA C + + P P + A S Sbjct: 28 CRSDARPVALQPAFPLGNGDGAFVSCLPLAAARPSPSPPAAPARPS 73
>ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2813 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = -3 Query: 222 GFASDLHTQYIASEPANMASKSMRTRGAAIAASSGMELELFSRRRGQSTSSWQAKR 55 GF D+ QY+ + A++++ S+ A+ SS +SR G+ST S Q++R Sbjct: 169 GFFLDV-AQYLLPDEADISTLSLARASPALTRSSPAPGSGYSRSGGRSTPSTQSQR 223
>VANG2_HUMAN (Q9ULK5) Vang-like protein 2 (Van Gogh-like protein 2) (Strabismus| 1) (Loop-tail protein 1 homolog) Length = 521 Score = 28.9 bits (63), Expect = 6.9 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 163 QEHEDQRSRHCSKQRDGAR 107 ++H D+R RH SK RDG R Sbjct: 21 RKHRDRRDRHRSKSRDGGR 39 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,785,429 Number of Sequences: 219361 Number of extensions: 940135 Number of successful extensions: 3724 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3535 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3719 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)