ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50f03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 ... 84 1e-16
2E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 ... 83 3e-16
3E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (... 82 7e-16
4E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 ... 78 1e-14
5EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 ... 53 4e-07
6E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 ... 50 2e-06
7E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 ... 49 5e-06
8EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudo... 42 6e-04
9PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regula... 40 0.002
10GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precur... 39 0.007
11PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regula... 35 0.13
12YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor 34 0.22
13KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-as... 33 0.48
14EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudo... 32 0.63
15FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor 30 2.4
16NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor 30 4.1
17DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Di... 29 5.3
18KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-as... 29 5.3
19VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein ... 29 5.3
20KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-as... 29 6.9
21HXD1_HUMAN (Q9GZZ0) Homeobox protein Hox-D1 29 6.9
22ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.... 29 6.9
23VANG2_HUMAN (Q9ULK5) Vang-like protein 2 (Van Gogh-like protein ... 29 6.9

>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 501

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +2

Query: 194 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 370
           +C+ K   +   +Q A+D+ACG G  DC+ +     C++P  VVAH +YA N+YYQK   
Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGK 419

Query: 371 MGATCDFMGVATLTGADPSAGSLQYP 448
              +CDF GVAT+T  DPS G+  +P
Sbjct: 420 ASGSCDFKGVATVTTTDPSRGTCVFP 445



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>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 402

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = +2

Query: 194 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 370
           YC+     +   +Q A+D+ACG G ++C++I     C+QP +V  H S+A NSYYQK   
Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 331

Query: 371 MGATCDFMGVATLTGADPSAGSLQYPAQR 457
              +CDF GVA +T  DPS GS  +P  +
Sbjct: 332 ASGSCDFKGVAMITTTDPSHGSCIFPGSK 360



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>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 461

 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 39/84 (46%), Positives = 47/84 (55%)
 Frame = +2

Query: 194 YCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGM 373
           +CV K  AN   +Q  I+YACG   DC  I S G CF P S+ AH SY  N+YYQ N   
Sbjct: 377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHT 435

Query: 374 GATCDFMGVATLTGADPSAGSLQY 445
              CDF G   +T +DPS G  +Y
Sbjct: 436 DLACDFKGTGIVTSSDPSYGGCKY 459



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>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 505

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +2

Query: 188 AMYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKN 364
           +M+CV K+DA+   +   +++ACG+G A+C  I    PC+ P  V +H S+A N YYQK 
Sbjct: 360 SMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKM 419

Query: 365 AGMGATCDFMGVATLTGADPSAGSLQY 445
              G TCDF G A  T  DPS  +  Y
Sbjct: 420 KSAGGTCDFDGTAITTTRDPSYRTCAY 446



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>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Anther-specific protein A6)
          Length = 478

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
 Frame = +2

Query: 191 MYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 367
           ++CV    AN   +++ +  AC +    C  +     C++P+S+  H SYA NSY+ +  
Sbjct: 388 VWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFR 447

Query: 368 GMGATCDFMGVATLTGADPSAGSLQYPA 451
                C F G+A  T  +P     ++P+
Sbjct: 448 NQSIQCFFNGLAHETTTNPGNDRCKFPS 475



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>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 484

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
 Frame = +2

Query: 194 YCVCKSDANPVAMQ--KAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 367
           +C+   +AN    Q   ++ YAC   ADCT +     C   +++  + SYA NSYYQ + 
Sbjct: 365 WCILAPNANLQDPQLGPSVSYACDH-ADCTSLGYGSSCGN-LNLAQNVSYAFNSYYQVSN 422

Query: 368 GMGATCDFMGVATLTGADPSAGSLQY 445
            + + C F G++ ++  DPS GS ++
Sbjct: 423 QLDSACKFPGLSIVSTRDPSVGSCKF 448



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>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 477

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
 Frame = +2

Query: 194 YCVCKSDA--NPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 367
           +CV K +   +   +  A+ YAC  G DCT +     C   +    + SYA NSYYQ   
Sbjct: 362 WCVMKPNVRLDDPQVAPAVSYACSLG-DCTSLGVGTSCAN-LDGKQNISYAFNSYYQIQD 419

Query: 368 GMGATCDFMGVATLTGADPSAGSLQYP 448
            +   C F  ++ +T  DPS G+ ++P
Sbjct: 420 QLDTACKFPNISEVTKTDPSTGTCRFP 446



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>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal|
           development 1)
          Length = 549

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
 Frame = +2

Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 346
           S ++ CV   + +        DY C K  DC+ I +N        + P       S+  N
Sbjct: 373 SSSLKCVVADNVSTDDYSDLFDYVCAK-IDCSGINANATTGDYGAYSPCGAKDKLSFVLN 431

Query: 347 SYYQKNAGMGATCDFMGVATLTGADPSAGSLQY--PAQRSGVG 469
            YY++     + CDF G A+L  A  ++    Y   A  SG+G
Sbjct: 432 LYYEEQNESKSACDFSGSASLQSASTASSCAAYLSSAGVSGLG 474



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>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)|
          Length = 546

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
 Frame = +2

Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 346
           S ++ CV     +         Y C K  DC  I +NG       + P       S+  N
Sbjct: 375 SASLKCVVDDKVDSDDYSDLFSYICAK-IDCDGINANGTTGEYGAYSPCHSKDKLSFVMN 433

Query: 347 SYYQKNAGMGATCDFMGVATLTGADPSAGSLQY--PAQRSGVG 469
            YY++N    + CDF G A+L  A  ++    Y   A  SG+G
Sbjct: 434 LYYEQNKESKSACDFGGSASLQSAKTASSCSAYLSSAGSSGLG 476



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>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor|
           (Glycoprotein GP115)
          Length = 559

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
 Frame = +2

Query: 197 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACNSYYQK 361
           CV   D +    +   ++ C +  DC+ I++NG       +   +     S+  N YY+K
Sbjct: 379 CVVSDDVDSDDYETLFNWICNE-VDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEK 437

Query: 362 NAGMGATCDFMGVATLTGADPSA 430
           + G  + C F G ATL  A   A
Sbjct: 438 SGGSKSDCSFSGSATLQTATTQA 460



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>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)|
          Length = 548

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
 Frame = +2

Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YAC 343
           S ++ CV   D +           CG   DC+ I+++G   +   V + CS      Y  
Sbjct: 385 SKSLECVVADDVDKEDYGDLFGQVCGY-IDCSAISADGSKGE-YGVASFCSDKDRLSYVL 442

Query: 344 NSYYQKNAGMGATCDFMGVATLTGADPSAGS 436
           N YY       + CDF G A++     ++GS
Sbjct: 443 NQYYLDQDKKSSACDFKGSASINSKASASGS 473



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>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor|
          Length = 542

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
 Frame = +2

Query: 197 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YACNSYYQ 358
           CV   D +         Y C +   C  IT+NG         ++C       Y  ++YY 
Sbjct: 376 CVINDDVSSDDYSDLFSYVCNE-ISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYYS 434

Query: 359 KNAGMGATCDFMGVATLTGADPSAGS 436
                   CDF G ATL  A  + G+
Sbjct: 435 AKGD----CDFSGSATLVSASSATGT 456



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>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated|
           protein 10.8) (High sulfur keratin-associated protein
           10.8) (Keratin-associated protein 18-8)
           (Keratin-associated protein 18.8)
          Length = 259

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 200 VCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGMGA 379
           +C   ++P   Q +   AC   + C Q      C +PI  V  CS A +   QK++   A
Sbjct: 137 ICSGASSPCCQQSSCQSACCTFSPCQQACCVPICCKPICCVPVCSGASSLCCQKSSCQPA 196

Query: 380 TC 385
            C
Sbjct: 197 CC 198



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>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal|
           development 2)
          Length = 549

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
 Frame = +2

Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACN 346
           S +  CV   D +           CG   DC  I++NG       F   S     SY  N
Sbjct: 385 SQSFNCVVADDVDAEDYSTLFGEVCGY-IDCGDISANGNTGEYGGFSFCSDKDRLSYVLN 443

Query: 347 SYYQKNAGMGATCDFMGVATL 409
            YY         CDF G A++
Sbjct: 444 QYYHDQNERADACDFAGSASI 464



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>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor|
          Length = 4007

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +2

Query: 197 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQP-ISVVAHCSYACNSYYQKNAGM 373
           C+C         Q  +   CGKG   ++   +G C +  +S    CSY     YQ     
Sbjct: 242 CICDRGEVRCHKQACLPLRCGKGQ--SRARRHGQCCEECVSPAGSCSYDGVVRYQDEMWK 299

Query: 374 GATCDF 391
           G+ C+F
Sbjct: 300 GSACEF 305



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>NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor|
          Length = 1278

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 182 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITS 289
           ++AMY  C+    P +  KA+   CGK AD    T+
Sbjct: 153 ANAMYNACRDVEAPSSNDKALGLLCGKDADACNATN 188



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>DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide|
           dehydrogenase)
          Length = 479

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
 Frame = +1

Query: 10  TPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALARHVRR--- 180
           T +   PR A             AL     +E+ +      NG ++G  AL   V +   
Sbjct: 210 TVVEFAPRCAPTLDSDVTDALVGALKRNGEDEVPMTGIEGVNGTNNGSIALTLEVEQAGG 269

Query: 181 ----LRCDVLRVQVGREP 222
               L CD L V VGR P
Sbjct: 270 QAETLHCDALLVSVGRRP 287



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>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated|
           protein 10.5) (High sulfur keratin-associated protein
           10.5) (Keratin-associated protein 18-5)
           (Keratin-associated protein 18.5)
          Length = 271

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
 Frame = +2

Query: 203 CKSDANPVAMQKAIDYACGKGADCTQ-----ITSNGPCFQPISVVAHCSYACNSYYQKNA 367
           C  D++      +    C   + C Q     +     CF+PI  V  CS A  S  Q+++
Sbjct: 145 CSEDSSSCCQHSSCQPTCCTSSPCQQSCYVPVCCKPVCFKPICCVPVCSGASTSCCQQSS 204

Query: 368 GMGATC 385
              A C
Sbjct: 205 CQPACC 210



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>VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein 2)|
           (Loop-tail-associated protein) (Loop-tail protein 1)
          Length = 521

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 163 QEHEDQRSRHCSKQRDGAR 107
           ++H D+R RH SK RDG+R
Sbjct: 21  RKHRDRRDRHRSKSRDGSR 39



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>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated|
           protein 10.4) (High sulfur keratin-associated protein
           10.4) (Keratin-associated protein 18-4)
           (Keratin-associated protein 18.4)
          Length = 401

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
 Frame = +2

Query: 200 VCKSDANPVAMQKAIDYACGKGADCTQ-----ITSNGPCFQPISVVAHCSYACNSYYQKN 364
           VC  D++    Q +   AC   + C Q     +     C +P+  V  CS A +   Q++
Sbjct: 242 VCSEDSSSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCKPVGSVPICSGASSLCCQQS 301

Query: 365 AGMGATC 385
           +   A C
Sbjct: 302 SCQPACC 308



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>HXD1_HUMAN (Q9GZZ0) Homeobox protein Hox-D1|
          Length = 328

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +2

Query: 203 CKSDANPVAMQKAIDYACGKGA--DCTQITSNGPCFQPISVVAHCS 334
           C+SDA PVA+Q A     G GA   C  + +  P   P +  A  S
Sbjct: 28  CRSDARPVALQPAFPLGNGDGAFVSCLPLAAARPSPSPPAAPARPS 73



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>ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase TEL1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2813

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = -3

Query: 222 GFASDLHTQYIASEPANMASKSMRTRGAAIAASSGMELELFSRRRGQSTSSWQAKR 55
           GF  D+  QY+  + A++++ S+     A+  SS      +SR  G+ST S Q++R
Sbjct: 169 GFFLDV-AQYLLPDEADISTLSLARASPALTRSSPAPGSGYSRSGGRSTPSTQSQR 223



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>VANG2_HUMAN (Q9ULK5) Vang-like protein 2 (Van Gogh-like protein 2) (Strabismus|
           1) (Loop-tail protein 1 homolog)
          Length = 521

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 163 QEHEDQRSRHCSKQRDGAR 107
           ++H D+R RH SK RDG R
Sbjct: 21  RKHRDRRDRHRSKSRDGGR 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,785,429
Number of Sequences: 219361
Number of extensions: 940135
Number of successful extensions: 3724
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3719
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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