ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549819.1| Oryza sativa (japonica cultivar-group), mRNA 268 1e-68
2dbj|AK099360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 1e-68
3dbj|AK099081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 1e-68
4dbj|AK063774.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 1e-68
5gb|AY596594.1| Saccharum officinarum clone SCCCCL3001H10, comple... 242 7e-61
6gb|AY108060.1| Zea mays PCO091037 mRNA sequence 226 4e-56
7gb|BT017939.1| Zea mays clone EL01N0520H08.c mRNA sequence 218 1e-53
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
9dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
10dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
11dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
12ref|XM_493875.1| Oryza sativa (japonica cultivar-group), predic... 82 2e-12
13dbj|AK103317.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
15gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 68 2e-08
16gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 68 2e-08
17gb|AF201084.1|AF201084 Secale cereale secalin precursor (gsec2-1... 50 0.005
18gb|BC083028.1| Xenopus laevis cDNA clone IMAGE:5156129 44 0.33
19gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.33
20gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.33
21emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.33
22gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.33
23gb|AC110907.7| Mus musculus chromosome 7, clone RP24-180J10, com... 42 1.3
24gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, co... 42 1.3
25gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.3
26ref|XM_510503.1| PREDICTED: Pan troglodytes integrin, alpha 11 (... 40 5.2
27gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 5.2
28gb|AY008372.1| Homo sapiens oxysterol binding protein-related pr... 40 5.2
29gb|AC122630.5| Rattus norvegicus 4 BAC CH230-131B2 (Children's H... 40 5.2
30ref|XM_542189.2| PREDICTED: Canis familiaris similar to signal p... 40 5.2
31gb|AC146026.2| Pan troglodytes BAC clone RP43-120F17 from 7, com... 40 5.2
32emb|AJ698723.2| Stigmatella aurantiaca myxochromide S biosynthet... 40 5.2
33ref|XM_966632.1| PREDICTED: Tribolium castaneum similar to Tyros... 40 5.2
34emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 5.2
35gb|AC183494.1| Brassica oleracea Contig C, complete sequence 40 5.2
36gb|AF392444.1|AF392444 Homo sapiens oxysterol-binding protein-li... 40 5.2
37gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 5.2
38ref|NM_015550.2| Homo sapiens oxysterol binding protein-like 3 (... 40 5.2
39ref|NM_145322.1| Homo sapiens oxysterol binding protein-like 3 (... 40 5.2
40ref|NM_145321.1| Homo sapiens oxysterol binding protein-like 3 (... 40 5.2
41ref|NM_145320.1| Homo sapiens oxysterol binding protein-like 3 (... 40 5.2
42gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 5.2
43dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.2
44emb|Y00142.1|SLXP55 Streptomyces lividans DNA for xp55 protein a... 40 5.2
45gb|AC003093.1|AC003093 Human BAC clone CTA-385F2 from 7p15, comp... 40 5.2
46dbj|AP004607.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.2
47dbj|AP000827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.2
48dbj|AP003122.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.2
49dbj|AB014604.2| Homo sapiens mRNA for KIAA0704 protein, partial cds 40 5.2
50dbj|AP004833.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.2 
>ref|XM_549819.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 877

 Score =  268 bits (135), Expect = 1e-68
 Identities = 201/223 (90%)
 Strand = Plus / Plus

                                                                       
Query: 161 gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
           ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 131 gcacaagaaggtttcgctctcccgccccaagcctggcgtcgagcgcctcgccgtctccct 190

                                                                       
Query: 221 cgacctctacaaccagggatccgcaactgcatatgatgtggccattaatgacgactcttg 280
           |||||||||||||||||||||||||||||| |||||||||  ||||||||| ||  ||||
Sbjct: 191 cgacctctacaaccagggatccgcaactgcctatgatgtgagcattaatgatgatacttg 250

                                                                       
Query: 281 gcccaaggaagcatttgaacttgtctctggagaggtctcaaagactttggaaaggcttga 340
           ||| ||||| |||||||| ||||||||||||||| | |||||||| ||||||||||||||
Sbjct: 251 gccaaaggaggcatttgagcttgtctctggagagatgtcaaagacattggaaaggcttga 310

                                                      
Query: 341 acctggtgccactgcttcgcacgcgtttgtattggagagcaaa 383
            ||||||| |||||||||||| || ||||| ||||||| ||||
Sbjct: 311 ccctggtgtcactgcttcgcatgcatttgtcttggagaccaaa 353
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>dbj|AK099360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F10, full
           insert sequence
          Length = 891

 Score =  268 bits (135), Expect = 1e-68
 Identities = 201/223 (90%)
 Strand = Plus / Plus

                                                                       
Query: 161 gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
           ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 130 gcacaagaaggtttcgctctcccgccccaagcctggcgtcgagcgcctcgccgtctccct 189

                                                                       
Query: 221 cgacctctacaaccagggatccgcaactgcatatgatgtggccattaatgacgactcttg 280
           |||||||||||||||||||||||||||||| |||||||||  ||||||||| ||  ||||
Sbjct: 190 cgacctctacaaccagggatccgcaactgcctatgatgtgagcattaatgatgatacttg 249

                                                                       
Query: 281 gcccaaggaagcatttgaacttgtctctggagaggtctcaaagactttggaaaggcttga 340
           ||| ||||| |||||||| ||||||||||||||| | |||||||| ||||||||||||||
Sbjct: 250 gccaaaggaggcatttgagcttgtctctggagagatgtcaaagacattggaaaggcttga 309

                                                      
Query: 341 acctggtgccactgcttcgcacgcgtttgtattggagagcaaa 383
            ||||||| |||||||||||| || ||||| ||||||| ||||
Sbjct: 310 ccctggtgtcactgcttcgcatgcatttgtcttggagaccaaa 352
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>dbj|AK099081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002L13, full
           insert sequence
          Length = 877

 Score =  268 bits (135), Expect = 1e-68
 Identities = 201/223 (90%)
 Strand = Plus / Plus

                                                                       
Query: 161 gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
           ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 130 gcacaagaaggtttcgctctcccgccccaagcctggcgtcgagcgcctcgccgtctccct 189

                                                                       
Query: 221 cgacctctacaaccagggatccgcaactgcatatgatgtggccattaatgacgactcttg 280
           |||||||||||||||||||||||||||||| |||||||||  ||||||||| ||  ||||
Sbjct: 190 cgacctctacaaccagggatccgcaactgcctatgatgtgagcattaatgatgatacttg 249

                                                                       
Query: 281 gcccaaggaagcatttgaacttgtctctggagaggtctcaaagactttggaaaggcttga 340
           ||| ||||| |||||||| ||||||||||||||| | |||||||| ||||||||||||||
Sbjct: 250 gccaaaggaggcatttgagcttgtctctggagagatgtcaaagacattggaaaggcttga 309

                                                      
Query: 341 acctggtgccactgcttcgcacgcgtttgtattggagagcaaa 383
            ||||||| |||||||||||| || ||||| ||||||| ||||
Sbjct: 310 ccctggtgtcactgcttcgcatgcatttgtcttggagaccaaa 352
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>dbj|AK063774.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C11, full
           insert sequence
          Length = 929

 Score =  268 bits (135), Expect = 1e-68
 Identities = 201/223 (90%)
 Strand = Plus / Plus

                                                                       
Query: 161 gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
           ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 143 gcacaagaaggtttcgctctcccgccccaagcctggcgtcgagcgcctcgccgtctccct 202

                                                                       
Query: 221 cgacctctacaaccagggatccgcaactgcatatgatgtggccattaatgacgactcttg 280
           |||||||||||||||||||||||||||||| |||||||||  ||||||||| ||  ||||
Sbjct: 203 cgacctctacaaccagggatccgcaactgcctatgatgtgagcattaatgatgatacttg 262

                                                                       
Query: 281 gcccaaggaagcatttgaacttgtctctggagaggtctcaaagactttggaaaggcttga 340
           ||| ||||| |||||||| ||||||||||||||| | |||||||| ||||||||||||||
Sbjct: 263 gccaaaggaggcatttgagcttgtctctggagagatgtcaaagacattggaaaggcttga 322

                                                      
Query: 341 acctggtgccactgcttcgcacgcgtttgtattggagagcaaa 383
            ||||||| |||||||||||| || ||||| ||||||| ||||
Sbjct: 323 ccctggtgtcactgcttcgcatgcatttgtcttggagaccaaa 365
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>gb|AY596594.1| Saccharum officinarum clone SCCCCL3001H10, complete sequence
          Length = 832

 Score =  242 bits (122), Expect = 7e-61
 Identities = 203/230 (88%)
 Strand = Plus / Minus

                                                                       
Query: 161 gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
           ||||||||||||  | || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 672 gcacaagaaggtttcgctgtcccgccccaagccgggcgtcgagcgcgtcgccgtctccct 613

                                                                       
Query: 221 cgacctctacaaccagggatccgcaactgcatatgatgtggccattaatgacgactcttg 280
           |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||
Sbjct: 612 cgacctctacaaccagggatccgcgactgcctatgatgtgtccattaatgacgactcttg 553

                                                                       
Query: 281 gcccaaggaagcatttgaacttgtctctggagaggtctcaaagactttggaaaggcttga 340
           ||| |  ||||||||||| |||||| ||||||||   || ||||||||||||||||||||
Sbjct: 552 gccaactgaagcatttgagcttgtcactggagagaaatcgaagactttggaaaggcttga 493

                                                             
Query: 341 acctggtgccactgcttcgcacgcgtttgtattggagagcaaaacacagg 390
            |||||||||||||| || ||| | | |||  |||||| |||||||||||
Sbjct: 492 ccctggtgccactgcatcacacacatatgtcctggagaccaaaacacagg 443
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>gb|AY108060.1| Zea mays PCO091037 mRNA sequence
          Length = 1057

 Score =  226 bits (114), Expect = 4e-56
 Identities = 189/214 (88%)
 Strand = Plus / Plus

                                                                       
Query: 177 ctctcccgccccaagcccggcgtcgagcgcctcgccgtctccctcgacctctacaaccag 236
           ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 309 ctctcccgccccaagccgggcgtcgagcgcgtcgccgtctccctcgacctctacaaccag 368

                                                                       
Query: 237 ggatccgcaactgcatatgatgtggccattaatgacgactcttggcccaaggaagcattt 296
           |||||||| ||||| ||||||||| |||||||||||||||||||||| |  ||||  |||
Sbjct: 369 ggatccgcgactgcctatgatgtgtccattaatgacgactcttggccaacagaagtgttt 428

                                                                       
Query: 297 gaacttgtctctggagaggtctcaaagactttggaaaggcttgaacctggtgccactgct 356
           || |||||| ||||||||   || ||||| |||||||||||||| |||||||||||||||
Sbjct: 429 gagcttgtcactggagagaaatcgaagacattggaaaggcttgaccctggtgccactgct 488

                                             
Query: 357 tcgcacgcgtttgtattggagagcaaaacacagg 390
           || ||| | | |||  |||||| |||||||||||
Sbjct: 489 tcacacacatatgtcctggagaccaaaacacagg 522
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>gb|BT017939.1| Zea mays clone EL01N0520H08.c mRNA sequence
          Length = 839

 Score =  218 bits (110), Expect = 1e-53
 Identities = 200/230 (86%)
 Strand = Plus / Plus

                                                                       
Query: 161 gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
           ||||||||||||  | ||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 138 gcacaagaaggtttcgctctcccgccccaagccgggcgtcgagcgcgtcgccgtctccct 197

                                                                       
Query: 221 cgacctctacaaccagggatccgcaactgcatatgatgtggccattaatgacgactcttg 280
           |||||||||||||||||||||||| ||||| ||||||||| |  ||||||||||||||||
Sbjct: 198 cgacctctacaaccagggatccgcgactgcctatgatgtgtcacttaatgacgactcttg 257

                                                                       
Query: 281 gcccaaggaagcatttgaacttgtctctggagaggtctcaaagactttggaaaggcttga 340
           ||| |   |||||||||| |||||| ||||||||   || ||||| ||||||||||||||
Sbjct: 258 gccaacacaagcatttgagcttgtcactggagagaaatcgaagacattggaaaggcttga 317

                                                             
Query: 341 acctggtgccactgcttcgcacgcgtttgtattggagagcaaaacacagg 390
            ||||||||||||||| | ||| | | |||  |||||| |||||||||||
Sbjct: 318 ccctggtgccactgctacacacacatatgtcctggagaccaaaacacagg 367
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  135 bits (68), Expect = 1e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                          
Query: 161    gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
              ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 147230 gcacaagaaggtttcgctctcccgccccaagcctggcgtcgagcgcctcgccgtctccct 147289

                                      
Query: 221    cgacctctacaaccagggatccgc 244
              ||||||||||||||||||||||||
Sbjct: 147290 cgacctctacaaccagggatccgc 147313



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                          
Query: 245    aactgcatatgatgtggccattaatgacgactcttggcccaaggaagcatttgaacttgt 304
              |||||| |||||||||  ||||||||| ||  ||||||| ||||| |||||||| |||||
Sbjct: 148450 aactgcctatgatgtgagcattaatgatgatacttggccaaaggaggcatttgagcttgt 148509

                                                  
Query: 305    ctctggagaggtctcaaagactttggaaaggcttga 340
              |||||||||| | |||||||| ||||||||||||||
Sbjct: 148510 ctctggagagatgtcaaagacattggaaaggcttga 148545



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 344    tggtgccactgcttcgcacgcgtttgtattggagagcaaa 383
              ||||| |||||||||||| || ||||| ||||||| ||||
Sbjct: 148634 tggtgtcactgcttcgcatgcatttgtcttggagaccaaa 148673
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>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0672D08
          Length = 173729

 Score =  135 bits (68), Expect = 1e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                          
Query: 161    gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
              ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 145032 gcacaagaaggtttcgctctcccgccccaagcctggcgtcgagcgcctcgccgtctccct 145091

                                      
Query: 221    cgacctctacaaccagggatccgc 244
              ||||||||||||||||||||||||
Sbjct: 145092 cgacctctacaaccagggatccgc 145115



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                          
Query: 245    aactgcatatgatgtggccattaatgacgactcttggcccaaggaagcatttgaacttgt 304
              |||||| |||||||||  ||||||||| ||  ||||||| ||||| |||||||| |||||
Sbjct: 146252 aactgcctatgatgtgagcattaatgatgatacttggccaaaggaggcatttgagcttgt 146311

                                                  
Query: 305    ctctggagaggtctcaaagactttggaaaggcttga 340
              |||||||||| | |||||||| ||||||||||||||
Sbjct: 146312 ctctggagagatgtcaaagacattggaaaggcttga 146347



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 344    tggtgccactgcttcgcacgcgtttgtattggagagcaaa 383
              ||||| |||||||||||| || ||||| ||||||| ||||
Sbjct: 146436 tggtgtcactgcttcgcatgcatttgtcttggagaccaaa 146475
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>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0455C04
          Length = 147940

 Score =  135 bits (68), Expect = 1e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                         
Query: 161   gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
             ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 95776 gcacaagaaggtttcgctctcccgccccaagcctggcgtcgagcgcctcgccgtctccct 95835

                                     
Query: 221   cgacctctacaaccagggatccgc 244
             ||||||||||||||||||||||||
Sbjct: 95836 cgacctctacaaccagggatccgc 95859



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                         
Query: 245   aactgcatatgatgtggccattaatgacgactcttggcccaaggaagcatttgaacttgt 304
             |||||| |||||||||  ||||||||| ||  ||||||| ||||| |||||||| |||||
Sbjct: 96996 aactgcctatgatgtgagcattaatgatgatacttggccaaaggaggcatttgagcttgt 97055

                                                 
Query: 305   ctctggagaggtctcaaagactttggaaaggcttga 340
             |||||||||| | |||||||| ||||||||||||||
Sbjct: 97056 ctctggagagatgtcaaagacattggaaaggcttga 97091



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 344   tggtgccactgcttcgcacgcgtttgtattggagagcaaa 383
             ||||| |||||||||||| || ||||| ||||||| ||||
Sbjct: 97180 tggtgtcactgcttcgcatgcatttgtcttggagaccaaa 97219
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>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0402A09
          Length = 141966

 Score =  135 bits (68), Expect = 1e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                          
Query: 161    gcacaagaaggtggccctctcccgccccaagcccggcgtcgagcgcctcgccgtctccct 220
              ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 132160 gcacaagaaggtttcgctctcccgccccaagcctggcgtcgagcgcctcgccgtctccct 132219

                                      
Query: 221    cgacctctacaaccagggatccgc 244
              ||||||||||||||||||||||||
Sbjct: 132220 cgacctctacaaccagggatccgc 132243



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                          
Query: 245    aactgcatatgatgtggccattaatgacgactcttggcccaaggaagcatttgaacttgt 304
              |||||| |||||||||  ||||||||| ||  ||||||| ||||| |||||||| |||||
Sbjct: 133380 aactgcctatgatgtgagcattaatgatgatacttggccaaaggaggcatttgagcttgt 133439

                                                  
Query: 305    ctctggagaggtctcaaagactttggaaaggcttga 340
              |||||||||| | |||||||| ||||||||||||||
Sbjct: 133440 ctctggagagatgtcaaagacattggaaaggcttga 133475



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 344    tggtgccactgcttcgcacgcgtttgtattggagagcaaa 383
              ||||| |||||||||||| || ||||| ||||||| ||||
Sbjct: 133564 tggtgtcactgcttcgcatgcatttgtcttggagaccaaa 133603
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>ref|XM_493875.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 579

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 195 ggcgtcgagcgcctcgccgtctccctcgacctctacaaccagggatccgcaactgcatat 254
           ||||| ||||||||||||||| ||||| |||||||||||||||| ||||| || || |||
Sbjct: 130 ggcgtggagcgcctcgccgtcaccctcaacctctacaaccagggttccgcgaccgcctat 189

                                                                    
Query: 255 gatgtggccattaatgacgactcttggcccaaggaagcatttgaacttgtctctgga 311
           |||||   | | || ||||||||||||||  |||| || ||| ||||| ||||||||
Sbjct: 190 gatgttagcttgaacgacgactcttggccacaggaggcttttcaacttatctctgga 246
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>dbj|AK103317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125H15, full
           insert sequence
          Length = 857

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 195 ggcgtcgagcgcctcgccgtctccctcgacctctacaaccagggatccgcaactgcatat 254
           ||||| ||||||||||||||| ||||| |||||||||||||||| ||||| || || |||
Sbjct: 162 ggcgtggagcgcctcgccgtcaccctcaacctctacaaccagggttccgcgaccgcctat 221

                                                                    
Query: 255 gatgtggccattaatgacgactcttggcccaaggaagcatttgaacttgtctctgga 311
           |||||   | | || ||||||||||||||  |||| || ||| ||||| ||||||||
Sbjct: 222 gatgttagcttgaacgacgactcttggccacaggaggcttttcaacttatctctgga 278
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                
Query: 195    ggcgtcgagcgcctcgccgtctccctcgacctctacaaccagggatccgc 244
              ||||| ||||||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 153235 ggcgtggagcgcctcgccgtcaccctcaacctctacaaccagggttccgc 153186
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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
             complete sequence
          Length = 160603

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 195   ggcgtcgagcgcctcgccgtctccctcgacctctacaaccagggatccgc 244
             ||||| ||||||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 35419 ggcgtggagcgcctcgccgtcaccctcaacctctacaaccagggttccgc 35370
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
              complete sequence
          Length = 156772

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                
Query: 195    ggcgtcgagcgcctcgccgtctccctcgacctctacaaccagggatccgc 244
              ||||| ||||||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 153235 ggcgtggagcgcctcgccgtcaccctcaacctctacaaccagggttccgc 153186
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>gb|AF201084.1|AF201084 Secale cereale secalin precursor (gsec2-1) gene, complete cds
          Length = 4971

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 192  cccggcgtcgagcgcctcgccgtctccctcgacctctacaaccagggatccgc 244
            |||||| |||||| ||||||| || ||||| ||||||||||| |||| |||||
Sbjct: 3191 cccggcatcgagcacctcgccatcaccctcaacctctacaactagggctccgc 3139



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 267  aatgacgactcttggcccaaggaagcatttga 298
            ||||| |||||||||||  |||||||||||||
Sbjct: 2580 aatgatgactcttggccgcaggaagcatttga 2549
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>gb|BC083028.1| Xenopus laevis cDNA clone IMAGE:5156129
          Length = 2348

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 56  cccatccaccaccatggggacg 77
           ||||||||||||||||||||||
Sbjct: 608 cccatccaccaccatggggacg 629
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 196     gcgtcgagcgcctcgccgtctccctcgacc 225
               |||||||||||||||||||| || ||||||
Sbjct: 3233736 gcgtcgagcgcctcgccgtcgccgtcgacc 3233765
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 196    gcgtcgagcgcctcgccgtctccctcgacc 225
              |||||||||||||||||||| || ||||||
Sbjct: 747424 gcgtcgagcgcctcgccgtcgccgtcgacc 747395
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 196    gcgtcgagcgcctcgccgtctccctcgacc 225
              |||||||||||||||||||| || ||||||
Sbjct: 556069 gcgtcgagcgcctcgccgtcgccgtcgacc 556040
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 196    gcgtcgagcgcctcgccgtctccctcgacc 225
              |||||||||||||||||||| || ||||||
Sbjct: 509557 gcgtcgagcgcctcgccgtcgccgtcgacc 509528
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>gb|AC110907.7| Mus musculus chromosome 7, clone RP24-180J10, complete sequence
          Length = 179750

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   ggccctctcccgccccaagcc 193
             |||||||||||||||||||||
Sbjct: 56826 ggccctctcccgccccaagcc 56806
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>gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, complete sequence
          Length = 219863

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    ggccctctcccgccccaagcc 193
              |||||||||||||||||||||
Sbjct: 219672 ggccctctcccgccccaagcc 219652
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 190     agcccggcgtcgagcgcctcg 210
               |||||||||||||||||||||
Sbjct: 1984357 agcccggcgtcgagcgcctcg 1984337
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>ref|XM_510503.1| PREDICTED: Pan troglodytes integrin, alpha 11 (LOC453537), mRNA
          Length = 3105

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 ctcttggcccaaggaagcatttga 298
           |||||||||||||| |||||||||
Sbjct: 471 ctcttggcccaaggcagcatttga 494
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 196     gcgtcgagcgcctcgccgtc 215
               ||||||||||||||||||||
Sbjct: 3287294 gcgtcgagcgcctcgccgtc 3287313
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>gb|AY008372.1| Homo sapiens oxysterol binding protein-related protein 3 (ORP3) mRNA,
            complete cds
          Length = 6631

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaggaagcatttgaacttgt 304
            ||||||||||||||||||||
Sbjct: 3588 aaggaagcatttgaacttgt 3607
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>gb|AC122630.5| Rattus norvegicus 4 BAC CH230-131B2 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 211343

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   caaagactttggaaaggctt 338
             ||||||||||||||||||||
Sbjct: 10602 caaagactttggaaaggctt 10583
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>ref|XM_542189.2| PREDICTED: Canis familiaris similar to signal peptide
           peptidase-like 2B isoform 2 (LOC485071), mRNA
          Length = 2643

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 aggtggccctctcccgcccc 188
           ||||||||||||||||||||
Sbjct: 98  aggtggccctctcccgcccc 79
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>gb|AC146026.2| Pan troglodytes BAC clone RP43-120F17 from 7, complete sequence
          Length = 169511

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   aaggaagcatttgaacttgt 304
             ||||||||||||||||||||
Sbjct: 61821 aaggaagcatttgaacttgt 61840
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>emb|AJ698723.2| Stigmatella aurantiaca myxochromide S biosynthetic gene cluster
          Length = 29111

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  cggcgtcgagcgcctcgccg 213
            ||||||||||||||||||||
Sbjct: 8835 cggcgtcgagcgcctcgccg 8816
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>ref|XM_966632.1| PREDICTED: Tribolium castaneum similar to Tyrosine-protein
            phosphatase non-receptor type 13 (Protein-tyrosine
            phosphatase 1E) (PTP-E1) (hPTPE1) (PTP-BAS)
            (Protein-tyrosine phosphatase PTPL1) (Fas-associated
            protein-tyrosine phosphatase 1) (FAP-1) (LOC660401), mRNA
          Length = 2307

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  ctccctcgacctctacaacc 234
            ||||||||||||||||||||
Sbjct: 1590 ctccctcgacctctacaacc 1609
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>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    gcccggcgtcgagcgcctcg 210
              ||||||||||||||||||||
Sbjct: 257490 gcccggcgtcgagcgcctcg 257471
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>gb|AC183494.1| Brassica oleracea Contig C, complete sequence
          Length = 285752

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    caggcacgagatcagatcag 53
             ||||||||||||||||||||
Sbjct: 81867 caggcacgagatcagatcag 81848
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>gb|AF392444.1|AF392444 Homo sapiens oxysterol-binding protein-like protein OSBPL3 (OSBPL3)
            mRNA, complete cds
          Length = 6689

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaggaagcatttgaacttgt 304
            ||||||||||||||||||||
Sbjct: 3667 aaggaagcatttgaacttgt 3686
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 64      ccaccatggggacgacgcgc 83
               ||||||||||||||||||||
Sbjct: 2200384 ccaccatggggacgacgcgc 2200403
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>ref|NM_015550.2| Homo sapiens oxysterol binding protein-like 3 (OSBPL3), transcript
            variant 1, mRNA
          Length = 6730

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaggaagcatttgaacttgt 304
            ||||||||||||||||||||
Sbjct: 3687 aaggaagcatttgaacttgt 3706
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>ref|NM_145322.1| Homo sapiens oxysterol binding protein-like 3 (OSBPL3), transcript
            variant 4, mRNA
          Length = 6529

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaggaagcatttgaacttgt 304
            ||||||||||||||||||||
Sbjct: 3486 aaggaagcatttgaacttgt 3505
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>ref|NM_145321.1| Homo sapiens oxysterol binding protein-like 3 (OSBPL3), transcript
            variant 3, mRNA
          Length = 6622

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaggaagcatttgaacttgt 304
            ||||||||||||||||||||
Sbjct: 3579 aaggaagcatttgaacttgt 3598
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>ref|NM_145320.1| Homo sapiens oxysterol binding protein-like 3 (OSBPL3), transcript
            variant 2, mRNA
          Length = 6637

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaggaagcatttgaacttgt 304
            ||||||||||||||||||||
Sbjct: 3594 aaggaagcatttgaacttgt 3613
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 64      ccaccatggggacgacgcgc 83
               ||||||||||||||||||||
Sbjct: 1245288 ccaccatggggacgacgcgc 1245269
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 208     tcgccgtctccctcgacctc 227
               ||||||||||||||||||||
Sbjct: 1601385 tcgccgtctccctcgacctc 1601404
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>emb|Y00142.1|SLXP55 Streptomyces lividans DNA for xp55 protein and p49 protein
          Length = 4540

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 191  gcccggcgtcgagcgcctcg 210
            ||||||||||||||||||||
Sbjct: 3894 gcccggcgtcgagcgcctcg 3875
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>gb|AC003093.1|AC003093 Human BAC clone CTA-385F2 from 7p15, complete sequence
          Length = 122000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    aaggaagcatttgaacttgt 304
              ||||||||||||||||||||
Sbjct: 106007 aaggaagcatttgaacttgt 105988
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>dbj|AP004607.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-529A4, complete
              sequence
          Length = 160683

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    ctcccgccccaagcccggcg 198
              ||||||||||||||||||||
Sbjct: 140338 ctcccgccccaagcccggcg 140357
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>dbj|AP000827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-716D19, complete
             sequence
          Length = 168579

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   ctcccgccccaagcccggcg 198
             ||||||||||||||||||||
Sbjct: 22419 ctcccgccccaagcccggcg 22438
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>dbj|AP003122.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-313I2, complete
              sequence
          Length = 137888

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    ctcccgccccaagcccggcg 198
              ||||||||||||||||||||
Sbjct: 137679 ctcccgccccaagcccggcg 137660
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>dbj|AB014604.2| Homo sapiens mRNA for KIAA0704 protein, partial cds
          Length = 6137

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaggaagcatttgaacttgt 304
            ||||||||||||||||||||
Sbjct: 3695 aaggaagcatttgaacttgt 3714
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>dbj|AP004833.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-358N4, complete
            sequence
          Length = 75416

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ctcccgccccaagcccggcg 198
            ||||||||||||||||||||
Sbjct: 1984 ctcccgccccaagcccggcg 1965


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,455,245
Number of Sequences: 3902068
Number of extensions: 2455245
Number of successful extensions: 48193
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47447
Number of HSP's gapped (non-prelim): 743
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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