ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 198 1e-47
2gb|BT009568.1| Triticum aestivum clone wre1n.pk0015.d2:fis, full... 92 2e-15
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
4dbj|AK120712.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
5dbj|AK059102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 72 1e-09
7emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa... 72 1e-09
8gb|BT017081.1| Zea mays clone EL01N0360D03.c mRNA sequence 62 1e-06
9gb|AY105714.1| Zea mays PCO128327 mRNA sequence 62 1e-06
10gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 46 0.086
11emb|AJ543650.1|RSP543650 Rhodobacter sphaeroides smc gene 46 0.086
12gb|AY831264.1| Hyla chrysoscelis voucher MP670 clone 2 18S ribos... 44 0.34
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
14dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
15dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
16gb|AY108116.1| Zea mays PCO074348 mRNA sequence 44 0.34
17gb|L39014.1|MZEPDI Zea mays protein disulfide isomerase (pdi) mR... 44 0.34
18ref|NM_189657.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
19gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.3
20ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.3
21ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.3
22gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 42 1.3
23gb|AY372243.1| Psittacid herpesvirus 1 isolate 97-0001, complete... 42 1.3
24emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.3
25emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.3
26ref|XM_944656.1| PREDICTED: Homo sapiens hypothetical protein LO... 42 1.3
27ref|XM_374037.3| PREDICTED: Homo sapiens hypothetical LOC389105 ... 42 1.3
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
30gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.3
31gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge... 42 1.3
32gb|AC016943.7|AC016943 Homo sapiens 3 BAC RP11-380G10 (Roswell P... 42 1.3
33dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
34dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
35dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
36dbj|AK119868.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
37dbj|AK060675.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
38gb|U62582.1|PAU62582 Pseudomonas aeruginosa aromatic aminotransf... 42 1.3
39emb|CT009609.1| Desulfococcus multivorans vrl island 42 1.3
40gb|M88627.1|PSEPHHY Pseudomonas aeruginosa phenylalanine hydroxy... 42 1.3
41ref|XM_480125.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
42ref|NM_177299.2| Mus musculus RIKEN cDNA A730013G03 gene (A73001... 40 5.3
43gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.3
44gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.3
45gb|AY480051.1| Homo sapiens plectin 11 mRNA, complete cds 40 5.3
46gb|AY480050.1| Homo sapiens plectin 10 mRNA, complete cds 40 5.3
47gb|AY480049.1| Homo sapiens plectin 8 mRNA, complete cds 40 5.3
48gb|AY480048.1| Homo sapiens plectin 7 mRNA, complete cds 40 5.3
49gb|AY480047.1| Homo sapiens plectin 6 mRNA, complete cds 40 5.3
50gb|AY480046.1| Homo sapiens plectin 3 mRNA, complete cds 40 5.3
51gb|AY480045.1| Homo sapiens plectin 2 mRNA, complete cds 40 5.3
52gb|AY480044.1| Homo sapiens plectin 1 mRNA, complete cds 40 5.3
53ref|XM_799415.1| Trypanosoma cruzi strain CL Brener trichohyalin... 40 5.3
54ref|XM_797930.1| Trypanosoma cruzi strain CL Brener trichohyalin... 40 5.3
55ref|NM_000445.2| Homo sapiens plectin 1, intermediate filament b... 40 5.3
56ref|NM_201378.1| Homo sapiens plectin 1, intermediate filament b... 40 5.3
57ref|NM_201379.1| Homo sapiens plectin 1, intermediate filament b... 40 5.3
58ref|NM_201380.2| Homo sapiens plectin 1, intermediate filament b... 40 5.3
59ref|NM_201381.1| Homo sapiens plectin 1, intermediate filament b... 40 5.3
60ref|NM_201383.1| Homo sapiens plectin 1, intermediate filament b... 40 5.3
61ref|NM_201382.1| Homo sapiens plectin 1, intermediate filament b... 40 5.3
62ref|NM_201384.1| Homo sapiens plectin 1, intermediate filament b... 40 5.3
63gb|AY330167.1| Cyprinus carpio nucleolin 2 mRNA, complete cds 40 5.3
64emb|AL135924.11| Human DNA sequence from clone RP11-63P12 on chr... 40 5.3
65emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.3
66emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 40 5.3
67emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 5.3
68emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.3
69emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 40 5.3
70emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 40 5.3
71gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, co... 40 5.3
72emb|Z54367.1|HSPLECTIN H.sapiens gene for plectin 40 5.3
73ref|NM_008740.2| Mus musculus N-ethylmaleimide sensitive fusion ... 40 5.3
74dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.3
75dbj|AB169469.1| Macaca fascicularis testis cDNA, clone: QtsA-212... 40 5.3
76dbj|AK042646.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 5.3
77dbj|AK082188.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 5.3
78dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
79gb|AY166587.1| Cyprinus carpio nucleolin mRNA, complete cds 40 5.3
80gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 5.3
81dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
82dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.3
83dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.3
84dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
85dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
86dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
87dbj|AK073149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
88gb|BC006627.1| Mus musculus N-ethylmaleimide sensitive fusion pr... 40 5.3
89emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.3
90emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on ch... 40 5.3 
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score =  198 bits (100), Expect = 1e-47
 Identities = 182/210 (86%), Gaps = 12/210 (5%)
 Strand = Plus / Minus

                                                                         
Query: 196   cggatgggcgcgcgcggcggaggccaccgggtgcggggcgtcgctgtcgccgtctatgac 255
             ||||||||||||||||||||||| |   |||||||||||||||||||||||||| |||||
Sbjct: 95085 cggatgggcgcgcgcggcggaggtc---gggtgcggggcgtcgctgtcgccgtcgatgac 95029

                                                                         
Query: 256   gcggttcgggatcgccgcgcgcttcaacgccacctcgtcggccgtgtcggaggccgc--- 312
             ||||||||||||| ||||| ||||||||||||  ||||||||||| ||| |||||||   
Sbjct: 95028 gcggttcgggatcaccgcgtgcttcaacgccatgtcgtcggccgtctcgaaggccgccgc 94969

                                                                         
Query: 313   ------cgccgcgtctcgcgccgtccacgcgatgccgcggaccgagcccgtcgtgtccgc 366
                   |||||||||  ||| |||||||||| |||||| ||| ||||| || ||||||||
Sbjct: 94968 caccaacgccgcgtcgagcgtcgtccacgcggtgccgcagactgagcctgttgtgtccgc 94909

                                           
Query: 367   cgagtggctgcacgccaacctcagggaccc 396
             ||||||||||||||||||||||||||||||
Sbjct: 94908 cgagtggctgcacgccaacctcagggaccc 94879
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>gb|BT009568.1| Triticum aestivum clone wre1n.pk0015.d2:fis, full insert mRNA
           sequence
          Length = 1165

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                     
Query: 339 tgccgcggaccgagcccgtcgtgtccgccgagtggctgcacgccaacctcagggaccc 396
           |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 12  tgccgcggaccgagcctgtcgtgtccgctgagtggctccacgccaacctcagggaccc 69
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 333      acgcgatgccgcggaccgagcccgtcgtgtccgccgagtggctgcacgccaacctcaggg 392
                ||||| ||||| |||| |||||||| || || ||||||||||||||||||||||||| ||
Sbjct: 25740045 acgcgctgccgaggacggagcccgtggtttcggccgagtggctgcacgccaacctcaagg 25739986

                    
Query: 393      accc 396
                ||||
Sbjct: 25739985 accc 25739982



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 259      gttcgggatcgccgcgcgcttcaacgccacctcgtcg 295
                |||||||||||| ||||||| ||||||||||||||||
Sbjct: 25740104 gttcgggatcgcggcgcgctgcaacgccacctcgtcg 25740068



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 164      ggcggcgcccggctcctccc 183
                ||||||||||||||||||||
Sbjct: 17340866 ggcggcgcccggctcctccc 17340885
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>dbj|AK120712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001O05, full
           insert sequence
          Length = 1450

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 333 acgcgatgccgcggaccgagcccgtcgtgtccgccgagtggctgcacgccaacctcaggg 392
           ||||| ||||| |||| |||||||| || || ||||||||||||||||||||||||| ||
Sbjct: 329 acgcgctgccgaggacggagcccgtggtttcggccgagtggctgcacgccaacctcaagg 388

               
Query: 393 accc 396
           ||||
Sbjct: 389 accc 392



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 259 gttcgggatcgccgcgcgcttcaacgccacctcgtcg 295
           |||||||||||| ||||||| ||||||||||||||||
Sbjct: 270 gttcgggatcgcggcgcgctgcaacgccacctcgtcg 306
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>dbj|AK059102.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D02, full
           insert sequence
          Length = 1212

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 333 acgcgatgccgcggaccgagcccgtcgtgtccgccgagtggctgcacgccaacctcaggg 392
           ||||| ||||| |||| |||||||| || || ||||||||||||||||||||||||| ||
Sbjct: 28  acgcgctgccgaggacggagcccgtggtttcggccgagtggctgcacgccaacctcaagg 87

               
Query: 393 accc 396
           ||||
Sbjct: 88  accc 91
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 333      acgcgatgccgcggaccgagcccgtcgtgtccgccgagtggctgcacgccaacctcaggg 392
                ||||| ||||| |||| |||||||| || || ||||||||||||||||||||||||| ||
Sbjct: 25668221 acgcgctgccgaggacggagcccgtggtttcggccgagtggctgcacgccaacctcaagg 25668162

                    
Query: 393      accc 396
                ||||
Sbjct: 25668161 accc 25668158



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 259      gttcgggatcgccgcgcgcttcaacgccacctcgtcg 295
                |||||||||||| ||||||| ||||||||||||||||
Sbjct: 25668280 gttcgggatcgcggcgcgctgcaacgccacctcgtcg 25668244



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 164      ggcggcgcccggctcctccc 183
                ||||||||||||||||||||
Sbjct: 17295237 ggcggcgcccggctcctccc 17295256
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>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 167131

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                          
Query: 333    acgcgatgccgcggaccgagcccgtcgtgtccgccgagtggctgcacgccaacctcaggg 392
              ||||| ||||| |||| |||||||| || || ||||||||||||||||||||||||| ||
Sbjct: 107283 acgcgctgccgaggacggagcccgtggtttcggccgagtggctgcacgccaacctcaagg 107224

                  
Query: 393    accc 396
              ||||
Sbjct: 107223 accc 107220



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 259    gttcgggatcgccgcgcgcttcaacgccacctcgtcg 295
              |||||||||||| ||||||| ||||||||||||||||
Sbjct: 107342 gttcgggatcgcggcgcgctgcaacgccacctcgtcg 107306
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>gb|BT017081.1| Zea mays clone EL01N0360D03.c mRNA sequence
          Length = 1426

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 350 gagcccgtcgtgtccgccgagtggctgcacgccaacctcagggaccc 396
           |||||||| ||||| ||||||||||| ||||||||||||| ||||||
Sbjct: 373 gagcccgtggtgtcggccgagtggctccacgccaacctcaaggaccc 419



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 259 gttcgggatcgccgcgcgcttcaacgccacctcgtc 294
           |||||||||||| ||||| | ||||||||| |||||
Sbjct: 288 gttcgggatcgcggcgcggtgcaacgccacgtcgtc 323
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>gb|AY105714.1| Zea mays PCO128327 mRNA sequence
          Length = 1362

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 350 gagcccgtcgtgtccgccgagtggctgcacgccaacctcagggaccc 396
           |||||||| ||||| ||||||||||| ||||||||||||| ||||||
Sbjct: 245 gagcccgtggtgtcggccgagtggctccacgccaacctcaaggaccc 291



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 259 gttcgggatcgccgcgcgcttcaacgccacctcgtc 294
           |||||||||||| ||||| | ||||||||| |||||
Sbjct: 160 gttcgggatcgcggcgcggtgcaacgccacgtcgtc 195
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 130     ctcgcgcgccgcctcggccgcct 152
               |||||||||||||||||||||||
Sbjct: 2625545 ctcgcgcgccgcctcggccgcct 2625567
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>emb|AJ543650.1|RSP543650 Rhodobacter sphaeroides smc gene
          Length = 3456

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 130  ctcgcgcgccgcctcggccgcct 152
            |||||||||||||||||||||||
Sbjct: 1116 ctcgcgcgccgcctcggccgcct 1094
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>gb|AY831264.1| Hyla chrysoscelis voucher MP670 clone 2 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1,
           complete sequence; and 5.8S ribosomal RNA gene, partial
           sequence
          Length = 533

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 134 cgcgccgcctcggccgccttcg 155
           ||||||||||||||||||||||
Sbjct: 186 cgcgccgcctcggccgccttcg 165
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 202     ggcgcgcgcggcggaggccacc 223
               ||||||||||||||||||||||
Sbjct: 6618525 ggcgcgcgcggcggaggccacc 6618546



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 130      ctcgcgcgccgcctcggccgccttc 154
                ||||||||||||||||||| |||||
Sbjct: 28002102 ctcgcgcgccgcctcggcctccttc 28002126



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 200      tgggcgcgcgcggcggaggc 219
                ||||||||||||||||||||
Sbjct: 30353480 tgggcgcgcgcggcggaggc 30353461
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>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0425F05
          Length = 162858

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 202   ggcgcgcgcggcggaggccacc 223
             ||||||||||||||||||||||
Sbjct: 52651 ggcgcgcgcggcggaggccacc 52672
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>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0690H04
          Length = 137319

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 202    ggcgcgcgcggcggaggccacc 223
              ||||||||||||||||||||||
Sbjct: 134901 ggcgcgcgcggcggaggccacc 134922
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>gb|AY108116.1| Zea mays PCO074348 mRNA sequence
          Length = 1955

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 153 tcgccctccgcggcggcgcccggctcctcc 182
           |||||||||||||||||| | |||||||||
Sbjct: 145 tcgccctccgcggcggcggcgggctcctcc 116
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>gb|L39014.1|MZEPDI Zea mays protein disulfide isomerase (pdi) mRNA, complete cds
          Length = 1823

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 153 tcgccctccgcggcggcgcccggctcctcc 182
           |||||||||||||||||| | |||||||||
Sbjct: 137 tcgccctccgcggcggcggcgggctcctcc 108
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>ref|NM_189657.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1398

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 136 cgccgcctcggccgccttcgc 156
           |||||||||||||||||||||
Sbjct: 213 cgccgcctcggccgccttcgc 193
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 137     gccgcctcggccgccttcgcc 157
               |||||||||||||||||||||
Sbjct: 2796602 gccgcctcggccgccttcgcc 2796622
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>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
            mRNA
          Length = 3549

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 308  gccgccgccgcgtctcgcgcc 328
            |||||||||||||||||||||
Sbjct: 2804 gccgccgccgcgtctcgcgcc 2824
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>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
            mRNA
          Length = 3549

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 308  gccgccgccgcgtctcgcgcc 328
            |||||||||||||||||||||
Sbjct: 2804 gccgccgccgcgtctcgcgcc 2824
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 131   tcgcgcgccgcctcggccgcc 151
             |||||||||||||||||||||
Sbjct: 36754 tcgcgcgccgcctcggccgcc 36734
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>gb|AY372243.1| Psittacid herpesvirus 1 isolate 97-0001, complete genome
          Length = 163025

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 151   cttcgccctccgcggcggcgc 171
             |||||||||||||||||||||
Sbjct: 37625 cttcgccctccgcggcggcgc 37605
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>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   gccgcctcggccgccttcgcc 157
             |||||||||||||||||||||
Sbjct: 28078 gccgcctcggccgccttcgcc 28098
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>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14
          Length = 306550

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 137    gccgcctcggccgccttcgcc 157
              |||||||||||||||||||||
Sbjct: 256915 gccgcctcggccgccttcgcc 256935
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>ref|XM_944656.1| PREDICTED: Homo sapiens hypothetical protein LOC651410 (LOC651410),
            mRNA
          Length = 3818

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 164  ggcggcgcccggctcctcccc 184
            |||||||||||||||||||||
Sbjct: 1215 ggcggcgcccggctcctcccc 1195
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>ref|XM_374037.3| PREDICTED: Homo sapiens hypothetical LOC389105 (LOC389105), mRNA
          Length = 3110

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 164 ggcggcgcccggctcctcccc 184
           |||||||||||||||||||||
Sbjct: 510 ggcggcgcccggctcctcccc 490
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 115    ggcggcctcgctcctctcgcgcgccgcctcggccgcc 151
              ||||||||||| |  ||| ||||||||||||||||||
Sbjct: 397483 ggcggcctcgcgcagctcccgcgccgcctcggccgcc 397447
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 136     cgccgcctcggccgccttcgc 156
               |||||||||||||||||||||
Sbjct: 4825915 cgccgcctcggccgccttcgc 4825895



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 308      gccgccgccgcgtctcgcgc 327
                ||||||||||||||||||||
Sbjct: 28583133 gccgccgccgcgtctcgcgc 28583152
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 133     gcgcgccgcctcggccgccttcgcc 157
               |||||||||||||||| ||||||||
Sbjct: 4677807 gcgcgccgcctcggccaccttcgcc 4677831



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cgccgcctcggccgccttcg 155
              ||||||||||||||||||||
Sbjct: 803163 cgccgcctcggccgccttcg 803182
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>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 207    gcgcggcggaggccaccgggtgcgg 231
              ||||||||||||||||| |||||||
Sbjct: 185834 gcgcggcggaggccacctggtgcgg 185858
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>gb|AC016943.7|AC016943 Homo sapiens 3 BAC RP11-380G10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 175992

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   ggcggcgcccggctcctcccc 184
             |||||||||||||||||||||
Sbjct: 65828 ggcggcgcccggctcctcccc 65808
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>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0547F09
          Length = 140615

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 130   ctcgcgcgccgcctcggccgccttc 154
             ||||||||||||||||||| |||||
Sbjct: 46921 ctcgcgcgccgcctcggcctccttc 46945
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>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0710E05
          Length = 179714

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   cgccgcctcggccgccttcgc 156
             |||||||||||||||||||||
Sbjct: 70564 cgccgcctcggccgccttcgc 70544
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>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1359_D06
          Length = 146805

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 115    ggcggcctcgctcctctcgcgcgccgcctcggccgcc 151
              ||||||||||| |  ||| ||||||||||||||||||
Sbjct: 126267 ggcggcctcgcgcagctcccgcgccgcctcggccgcc 126231
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>dbj|AK119868.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B12, full
           insert sequence
          Length = 1834

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 136 cgccgcctcggccgccttcgc 156
           |||||||||||||||||||||
Sbjct: 326 cgccgcctcggccgccttcgc 306
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>dbj|AK060675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A04, full
           insert sequence
          Length = 1332

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 115 ggcggcctcgctcctctcgcgcgccgcctcggccgcc 151
           ||||||||||| |  ||| ||||||||||||||||||
Sbjct: 122 ggcggcctcgcgcagctcccgcgccgcctcggccgcc 86
to top
>gb|U62582.1|PAU62582 Pseudomonas aeruginosa aromatic aminotransferase (phhC) gene,
           partial cds and penicillin-binding protein 5 (pbpG)
           gene, complete cds
          Length = 1666

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 132 cgcgcgccgcctcggccgcct 152
           |||||||||||||||||||||
Sbjct: 206 cgcgcgccgcctcggccgcct 226
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>emb|CT009609.1| Desulfococcus multivorans vrl island
          Length = 89210

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 251 atgacgcggttcgggatcgcc 271
           |||||||||||||||||||||
Sbjct: 405 atgacgcggttcgggatcgcc 425
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>gb|M88627.1|PSEPHHY Pseudomonas aeruginosa phenylalanine hydroxylase gene, complete cds
          Length = 2843

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 132  cgcgcgccgcctcggccgcct 152
            |||||||||||||||||||||
Sbjct: 2744 cgcgcgccgcctcggccgcct 2764
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>ref|XM_480125.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2315

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgcctcggccgccttcgccctcc 161
           ||||||||||||||||| ||||||
Sbjct: 544 ccgcctcggccgccttctccctcc 521
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>ref|NM_177299.2| Mus musculus RIKEN cDNA A730013G03 gene (A730013G03Rik), mRNA
          Length = 2097

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  cgagaggccagggccctacc 106
           ||||||||||||||||||||
Sbjct: 904 cgagaggccagggccctacc 923
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 307    ggccgccgccgcgtctcgcgccgt 330
              ||||||||||||||| ||||||||
Sbjct: 537526 ggccgccgccgcgtcacgcgccgt 537549
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 307     ggccgccgccgcgtctcgcgccgt 330
               ||||||||||||||| ||||||||
Sbjct: 3237543 ggccgccgccgcgtcacgcgccgt 3237520
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>gb|AY480051.1| Homo sapiens plectin 11 mRNA, complete cds
          Length = 14797

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4720 tctcgcgcgccgcctcggcc 4701
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>gb|AY480050.1| Homo sapiens plectin 10 mRNA, complete cds
          Length = 14689

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4612 tctcgcgcgccgcctcggcc 4593
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>gb|AY480049.1| Homo sapiens plectin 8 mRNA, complete cds
          Length = 14675

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4598 tctcgcgcgccgcctcggcc 4579
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>gb|AY480048.1| Homo sapiens plectin 7 mRNA, complete cds
          Length = 14646

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4569 tctcgcgcgccgcctcggcc 4550
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>gb|AY480047.1| Homo sapiens plectin 6 mRNA, complete cds
          Length = 15249

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 5172 tctcgcgcgccgcctcggcc 5153
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>gb|AY480046.1| Homo sapiens plectin 3 mRNA, complete cds
          Length = 14751

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4674 tctcgcgcgccgcctcggcc 4655
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>gb|AY480045.1| Homo sapiens plectin 2 mRNA, complete cds
          Length = 14626

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4549 tctcgcgcgccgcctcggcc 4530
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>gb|AY480044.1| Homo sapiens plectin 1 mRNA, complete cds
          Length = 14755

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4678 tctcgcgcgccgcctcggcc 4659
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>ref|XM_799415.1| Trypanosoma cruzi strain CL Brener trichohyalin
            (Tc00.1047053511805.20) partial mRNA
          Length = 2067

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 136  cgccgcctcggccgccttcgccctccgc 163
            |||| |||||||| ||||||||||||||
Sbjct: 1881 cgcctcctcggcctccttcgccctccgc 1854



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 136  cgccgcctcggccgccttcgccctccgc 163
            |||| |||||||| ||||||||||||||
Sbjct: 1563 cgcctcctcggcctccttcgccctccgc 1536



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 136  cgccgcctcggccgccttcgccctccgc 163
            |||| |||||||| ||||||||||||||
Sbjct: 1245 cgcctcctcggcctccttcgccctccgc 1218



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 136 cgccgcctcggccgccttcgccctccgc 163
           |||| |||||||| ||||||||||||||
Sbjct: 927 cgcctcctcggcctccttcgccctccgc 900



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 136 cgccgcctcggccgccttcgccctccgc 163
           |||| |||||||| ||||||||||||||
Sbjct: 609 cgcctcctcggcctccttcgccctccgc 582



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 136 cgccgcctcggccgccttcgccctccgc 163
           |||| |||||||| ||||||||||||||
Sbjct: 291 cgcctcctcggcctccttcgccctccgc 264
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>ref|XM_797930.1| Trypanosoma cruzi strain CL Brener trichohyalin
            (Tc00.1047053511015.30) partial mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 136  cgccgcctcggccgccttcgccctccgc 163
            |||| |||||||| ||||||||||||||
Sbjct: 1245 cgcctcctcggcctccttcgccctccgc 1218



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 136 cgccgcctcggccgccttcgccctccgc 163
           |||| |||||||| ||||||||||||||
Sbjct: 927 cgcctcctcggcctccttcgccctccgc 900



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 136 cgccgcctcggccgccttcgccctccgc 163
           |||| |||||||| ||||||||||||||
Sbjct: 609 cgcctcctcggcctccttcgccctccgc 582



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 136 cgccgcctcggccgccttcgccctccgc 163
           |||| |||||||| ||||||||||||||
Sbjct: 291 cgcctcctcggcctccttcgccctccgc 264
to top
>ref|NM_000445.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 1, mRNA
          Length = 14755

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4678 tctcgcgcgccgcctcggcc 4659
to top
>ref|NM_201378.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 2, mRNA
          Length = 14626

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4549 tctcgcgcgccgcctcggcc 4530
to top
>ref|NM_201379.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 3, mRNA
          Length = 14751

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4674 tctcgcgcgccgcctcggcc 4655
to top
>ref|NM_201380.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 6, mRNA
          Length = 15249

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 5172 tctcgcgcgccgcctcggcc 5153
to top
>ref|NM_201381.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 7, mRNA
          Length = 14646

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4569 tctcgcgcgccgcctcggcc 4550
to top
>ref|NM_201383.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 10, mRNA
          Length = 14689

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4612 tctcgcgcgccgcctcggcc 4593
to top
>ref|NM_201382.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 8, mRNA
          Length = 14675

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4598 tctcgcgcgccgcctcggcc 4579
to top
>ref|NM_201384.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa
            (PLEC1), transcript variant 11, mRNA
          Length = 14797

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 4720 tctcgcgcgccgcctcggcc 4701
to top
>gb|AY330167.1| Cyprinus carpio nucleolin 2 mRNA, complete cds
          Length = 2619

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 136  cgccgcctcggccgccttcgccct 159
            |||| |||||||||||||||||||
Sbjct: 1807 cgccccctcggccgccttcgccct 1784
to top
>emb|AL135924.11| Human DNA sequence from clone RP11-63P12 on chromosome 9q21.11-21.33
             Contains the ZNF216 gene for zinc finger protein 216, a
             novel gene (FLJ37891), an (NM23B) expressed in
             non-metastatic cells 2 (NME2) pseudogene, a novel gene,
             the 3' end of the GDA gene for guanine deaminase and a CpG
             island, complete sequence
          Length = 162985

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   cctccgcggcggcgcccggc 176
             ||||||||||||||||||||
Sbjct: 42034 cctccgcggcggcgcccggc 42053
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   cgcgccgcctcggccgcctt 153
             ||||||||||||||||||||
Sbjct: 72128 cgcgccgcctcggccgcctt 72147
to top
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    cgcgccgcctcggccgcctt 153
              ||||||||||||||||||||
Sbjct: 165519 cgcgccgcctcggccgcctt 165500
to top
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    cgcgccgcctcggccgcctt 153
              ||||||||||||||||||||
Sbjct: 210681 cgcgccgcctcggccgcctt 210662
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 307     ggccgccgccgcgtctcgcgccgt 330
               ||||||||||||||| ||||||||
Sbjct: 2967408 ggccgccgccgcgtcacgcgccgt 2967385
to top
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    acgccacctcgtcggccgtg 301
              ||||||||||||||||||||
Sbjct: 288306 acgccacctcgtcggccgtg 288325
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ccgcctcggccgccttcgcc 157
             ||||||||||||||||||||
Sbjct: 75628 ccgcctcggccgccttcgcc 75609
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>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence
          Length = 215342

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tctcgcgcgccgcctcggcc 148
              ||||||||||||||||||||
Sbjct: 146557 tctcgcgcgccgcctcggcc 146538
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>emb|Z54367.1|HSPLECTIN H.sapiens gene for plectin
          Length = 14189

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  tctcgcgcgccgcctcggcc 148
            ||||||||||||||||||||
Sbjct: 5002 tctcgcgcgccgcctcggcc 4983
to top
>ref|NM_008740.2| Mus musculus N-ethylmaleimide sensitive fusion protein (Nsf), mRNA
          Length = 3787

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tgggcgcgcgcggcggaggc 219
           ||||||||||||||||||||
Sbjct: 9   tgggcgcgcgcggcggaggc 28
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 140     gcctcggccgccttcgccctccgc 163
               |||||||||||||||||| |||||
Sbjct: 1648036 gcctcggccgccttcgccatccgc 1648013
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>dbj|AB169469.1| Macaca fascicularis testis cDNA, clone: QtsA-21272, similar to
           human ATP synthase, H+ transporting, mitochondrial F0
           complex,subunit s (factor B) (ATP5S), mRNA, RefSeq:
           NM_015684.1
          Length = 815

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 199 atgggcgcgcgcggcggagg 218
           ||||||||||||||||||||
Sbjct: 2   atgggcgcgcgcggcggagg 21
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>dbj|AK042646.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730013G03 product:hypothetical
           protein, full insert sequence
          Length = 1554

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  cgagaggccagggccctacc 106
           ||||||||||||||||||||
Sbjct: 411 cgagaggccagggccctacc 430
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>dbj|AK082188.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230021F18 product:hypothetical
           protein, full insert sequence
          Length = 2097

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  cgagaggccagggccctacc 106
           ||||||||||||||||||||
Sbjct: 904 cgagaggccagggccctacc 923
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 138     ccgcctcggccgccttcgccctcc 161
               ||||||||||||||||| ||||||
Sbjct: 2966982 ccgcctcggccgccttctccctcc 2966959
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>gb|AY166587.1| Cyprinus carpio nucleolin mRNA, complete cds
          Length = 2784

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 136  cgccgcctcggccgccttcgccct 159
            |||| |||||||||||||||||||
Sbjct: 1977 cgccccctcggccgccttcgccct 1954
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 151     cttcgccctccgcggcggcg 170
               ||||||||||||||||||||
Sbjct: 1563260 cttcgccctccgcggcggcg 1563241
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>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C09
          Length = 170226

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    gccgccgccgcgtctcgcgc 327
              ||||||||||||||||||||
Sbjct: 109572 gccgccgccgcgtctcgcgc 109591
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 132     cgcgcgccgcctcggccgcc 151
               ||||||||||||||||||||
Sbjct: 2582537 cgcgcgccgcctcggccgcc 2582556
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 293     tcggccgtgtcggaggccg-ccgccgcg 319
               ||||||||||||||||||| ||||||||
Sbjct: 4708068 tcggccgtgtcggaggccgtccgccgcg 4708095
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>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548E04
          Length = 138037

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    tgggcgcgcgcggcggaggc 219
              ||||||||||||||||||||
Sbjct: 100075 tgggcgcgcgcggcggaggc 100056
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>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0443G08
          Length = 162139

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 138    ccgcctcggccgccttcgccctcc 161
              ||||||||||||||||| ||||||
Sbjct: 140044 ccgcctcggccgccttctccctcc 140021
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>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1349_D05
          Length = 174478

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 138   ccgcctcggccgccttcgccctcc 161
             ||||||||||||||||| ||||||
Sbjct: 17705 ccgcctcggccgccttctccctcc 17682
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>dbj|AK073149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010L07, full
           insert sequence
          Length = 2315

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgcctcggccgccttcgccctcc 161
           ||||||||||||||||| ||||||
Sbjct: 544 ccgcctcggccgccttctccctcc 521
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>gb|BC006627.1| Mus musculus N-ethylmaleimide sensitive fusion protein, mRNA (cDNA
           clone MGC:11511 IMAGE:3968733), complete cds
          Length = 3787

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tgggcgcgcgcggcggaggc 219
           ||||||||||||||||||||
Sbjct: 9   tgggcgcgcgcggcggaggc 28
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>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 154826

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   ggcggcgcccggctcctccc 183
             ||||||||||||||||||||
Sbjct: 62503 ggcggcgcccggctcctccc 62484
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>emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on chromosome 1, complete
             sequence
          Length = 189860

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    cgagaggccagggccctacc 106
             ||||||||||||||||||||
Sbjct: 79068 cgagaggccagggccctacc 79087


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,644,854
Number of Sequences: 3902068
Number of extensions: 2644854
Number of successful extensions: 63929
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 60315
Number of HSP's gapped (non-prelim): 3613
length of query: 396
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 374
effective length of database: 17,147,199,772
effective search space: 6413052714728
effective search space used: 6413052714728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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