ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart50e02 |
|---|---|
| Clone Library Name | barley_pub |
>PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) (Fragment)| Length = 377 Score = 115 bits (289), Expect = 3e-26 Identities = 56/97 (57%), Positives = 74/97 (76%), Gaps = 1/97 (1%) Frame = +2 Query: 95 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 271 ++VT+LS+DGGG++GIIPAI+L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 18 EMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMI 77 Query: 272 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQNCRGSIF 382 T P+++ RP KD+ FY + P IF N GSIF Sbjct: 78 TTPNENNRPFAAAKDIVPFYFEHGPHIF--NYSGSIF 112
>PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein)| Length = 386 Score = 115 bits (289), Expect = 3e-26 Identities = 56/97 (57%), Positives = 74/97 (76%), Gaps = 1/97 (1%) Frame = +2 Query: 95 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 271 ++VT+LS+DGGG++GIIPAI+L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 27 EMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMI 86 Query: 272 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQNCRGSIF 382 T P+++ RP KD+ FY + P IF N GSIF Sbjct: 87 TTPNENNRPFAAAKDIVPFYFEHGPHIF--NYSGSIF 121
>PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) (Potato tuber| protein) Length = 386 Score = 114 bits (286), Expect = 7e-26 Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 1/103 (0%) Frame = +2 Query: 95 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 271 ++VT+LS+DGGG++GIIPAI+L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 27 EMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMI 86 Query: 272 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQNCRGSIFSQIGSG 400 T P+++ RP KD+ FY + P IF N GSI + G Sbjct: 87 TTPNENNRPFAAAKDIVPFYFEHGPHIF--NYSGSIIGPMYDG 127
>PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein)| Length = 386 Score = 114 bits (286), Expect = 7e-26 Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 1/103 (0%) Frame = +2 Query: 95 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 271 ++VT+LS+DGGG++GIIPAI+L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 27 EMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMI 86 Query: 272 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQNCRGSIFSQIGSG 400 T P+++ RP KD+ FY + P IF N GSI + G Sbjct: 87 TTPNENNRPFAAAKDIVPFYFEHGPHIF--NYSGSILGPMYDG 127
>PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein)| Length = 386 Score = 114 bits (285), Expect = 9e-26 Identities = 55/97 (56%), Positives = 73/97 (75%), Gaps = 1/97 (1%) Frame = +2 Query: 95 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 271 ++VT+LS+DGGG++GIIPA +L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 27 EMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAMI 86 Query: 272 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQNCRGSIF 382 T P++ RP KD+ FY + PKIF + GSIF Sbjct: 87 TTPNETNRPFAAAKDIVPFYFEHGPKIFQSS--GSIF 121
>PA2G6_HUMAN (O60733) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 806 Score = 41.2 bits (95), Expect = 0.001 Identities = 23/55 (41%), Positives = 32/55 (58%) Frame = +2 Query: 107 ILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVML 271 +L +DGGGV+G+I +L +EK D FD VAGTSTGG+L + + Sbjct: 480 LLCLDGGGVKGLIIIQLLIAIEK------ASGVATKDLFDWVAGTSTGGILALAI 528
>PA2G6_MOUSE (P97819) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 752 Score = 40.8 bits (94), Expect = 0.001 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +2 Query: 107 ILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVML 271 +L +DGGGV+G++ +L +EK D FD VAGTSTGG+L + + Sbjct: 426 LLCLDGGGVKGLVIIQLLIAIEK------ASGVATKDLFDWVAGTSTGGILALAI 474
>PA2G6_RAT (P97570) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 751 Score = 40.8 bits (94), Expect = 0.001 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +2 Query: 107 ILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVML 271 +L +DGGGV+G++ +L +EK D FD VAGTSTGG+L + + Sbjct: 425 LLCLDGGGVKGLVIIQLLIAIEK------ASGVATKDLFDWVAGTSTGGILALAI 473
>DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) Length = 510 Score = 33.9 bits (76), Expect = 0.16 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 4/86 (4%) Frame = -2 Query: 352 DFGRLVDVELGQILAVEQRPAILVRRREHH----RQEAPGARAGDDIEVVRDPSIRPVQF 185 D R ++V + + A L + REH RQE+ R+ +D + V+DPS Q Sbjct: 284 DDSRTIEVMSDSTENPDSKEAGLGQSREHSKSESRQESEENRSPEDSQDVQDPSSESSQE 343 Query: 184 LELLFKESEDDGRDDSSHAAAVDAQD 107 ++L +E+ + ++++ H + D D Sbjct: 344 VDLPSQENSSESQEEALHESRGDNPD 369
>DUS18_PONPY (Q5R8X2) Dual specificity protein phosphatase 18 (EC 3.1.3.48) (EC| 3.1.3.16) Length = 188 Score = 31.2 bits (69), Expect = 1.0 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%) Frame = +2 Query: 59 ANSKVMAAGDQAKVVTILSVDGGGVRGIIPAIVLAFLEKELQKL-----DGPDARIADYF 223 AN+K+M + +Q +V +SV+ V+ L +++Q L D PD+R+ D+F Sbjct: 35 ANNKLMLSSNQITMVINVSVE-----------VVNTLYEDIQYLQVPVADAPDSRLCDFF 83 Query: 224 DVVA 235 D VA Sbjct: 84 DPVA 87
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.8 bits (68), Expect = 1.4 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = -3 Query: 288 SLSGAVSITVKRPPVLVPA-TTSK*SAILASGPSNFWSSFSRKARTMAGMIPLTPPPSTL 112 +L A+ +T PP A TT+ L+ PS S R P PST+ Sbjct: 4240 TLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTV 4299 Query: 111 RMVTTFAWSPAAITL 67 + TT AW+P L Sbjct: 4300 QTTTTSAWTPTPTPL 4314
>Y2003_STRP8 (P67375) Hypothetical UPF0230 protein spyM18_2003| Length = 286 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +2 Query: 161 AFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYI 334 A + ++L + D PDA + + D +A G LT++ G+ L + KD+ + I Sbjct: 100 ALMARDLVREDYPDA-VIEIVDTLAAAGGEGYLTILAAEARDSGKNLLETKDIVEAVI 156
>Y1936_STRP1 (P67374) Hypothetical UPF0230 protein SPy1936/M5005_Spy1650| Length = 286 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +2 Query: 161 AFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYI 334 A + ++L + D PDA + + D +A G LT++ G+ L + KD+ + I Sbjct: 100 ALMARDLVREDYPDA-VIEIVDTLAAAGGEGYLTILAAEARDSGKNLLETKDIVEAVI 156
>Y1658_STRP6 (Q5X9X0) Hypothetical UPF0230 protein M6_Spy1658| Length = 286 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +2 Query: 161 AFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYI 334 A + ++L + D PDA + + D +A G LT++ G+ L + KD+ + I Sbjct: 100 ALMARDLVREDYPDA-VIEIVDTLAAAGGEGYLTILAAEARDSGKNLLETKDIVEAVI 156
>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)| Length = 1176 Score = 29.6 bits (65), Expect = 3.0 Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 3/96 (3%) Frame = -2 Query: 340 LVDVEL-GQILAVEQRPAILVRR--REHHRQEAPGARAGDDIEVVRDPSIRPVQFLELLF 170 L+D+++ G+++ +E+ +L R+ E G R G +EV+ ++ V+ Sbjct: 201 LMDLQVFGRVVVIERNGWVLSRQVDGEAGALVLEGVR-GLGVEVLTRKRVKEVEC----- 254 Query: 169 KESEDDGRDDSSHAAAVDAQDGHHLRLVTCCHHFGV 62 ES+D+G + + +DG +L T C G+ Sbjct: 255 DESKDEGEKEKKRVKGIRFEDGEYLACSTICFAIGI 290
>MURA_PELLD (Q3B5D7) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC| 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) Length = 424 Score = 29.3 bits (64), Expect = 3.9 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Frame = +2 Query: 86 DQAKVVTILS---VDGGGV--RGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAGTSTG 250 D+ + TIL+ + GG V RG+IP+ +E LQK RI D V STG Sbjct: 234 DRIEAGTILAAAAITGGSVTIRGVIPS----HMESVLQKFSDAGCRIETTDDTVILKSTG 289 Query: 251 GLLTVMLTA 277 L +TA Sbjct: 290 RLKATDITA 298
>ETFA_BRAJA (P53573) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 314 Score = 28.9 bits (63), Expect = 5.1 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 17/131 (12%) Frame = +2 Query: 59 ANSKVMAAGDQAKVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAG 238 A+ +V+ AG+ AK + GV+ ++ A + + L +A +D + Sbjct: 30 ADVEVLVAGEGAKAAADAAAKLAGVKKVLLADGALYAHDLAEPLAALIVSLAPSYDAIVA 89 Query: 239 TSTGGLLTVM-----------------LTAPDKDGRPLFDGKDLAKFYIDESPKIFPQNC 367 +T VM + APD RP++ G + ++ K+ Sbjct: 90 PATSRFKNVMPRVAALLDVMQVSEIIKVVAPDTYERPIYAGNAIQTVKSKDAKKVI--TV 147 Query: 368 RGSIFSQIGSG 400 R S F+ G G Sbjct: 148 RTSTFAAAGEG 158
>DUS18_HUMAN (Q8NEJ0) Dual specificity protein phosphatase 18 (EC 3.1.3.48) (EC| 3.1.3.16) (Low molecular weight dual specificity phosphatase 20) Length = 188 Score = 28.9 bits (63), Expect = 5.1 Identities = 15/59 (25%), Positives = 32/59 (54%) Frame = +2 Query: 59 ANSKVMAAGDQAKVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVA 235 AN+K+M + +Q +V +SV+ ++ + ++ D P++R+ D+FD +A Sbjct: 35 ANNKLMLSSNQITMVINVSVE------VVNTLYEDIQYMQVPVADSPNSRLCDFFDPIA 87
>THID_STAAR (Q6GEY2) Phosphomethylpyrimidine kinase (EC 2.7.4.7) (HMP-phosphate| kinase) (HMP-P kinase) Length = 276 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 245 TGGLLTVMLTAPDKDGRPLFDGKDLAKFYIDESPKIFPQNCRG 373 TG + ++TA GRPLF+ AK +I S + P+ RG Sbjct: 213 TGCTFSAVITAELAKGRPLFEAVHKAKKFISMSIQYTPEIGRG 255
>THID_STAAN (P99124) Phosphomethylpyrimidine kinase (EC 2.7.4.7) (HMP-phosphate| kinase) (HMP-P kinase) Length = 276 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 245 TGGLLTVMLTAPDKDGRPLFDGKDLAKFYIDESPKIFPQNCRG 373 TG + ++TA GRPLF+ AK +I S + P+ RG Sbjct: 213 TGCTFSAVITAELAKGRPLFEAVHKAKKFISMSIQYTPEIGRG 255
>THID_STAAM (P66915) Phosphomethylpyrimidine kinase (EC 2.7.4.7) (HMP-phosphate| kinase) (HMP-P kinase) Length = 276 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 245 TGGLLTVMLTAPDKDGRPLFDGKDLAKFYIDESPKIFPQNCRG 373 TG + ++TA GRPLF+ AK +I S + P+ RG Sbjct: 213 TGCTFSAVITAELAKGRPLFEAVHKAKKFISMSIQYTPEIGRG 255
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = -2 Query: 283 VRRREHHRQEAPGARAGDDIEVVRDP-----SIRPVQFLELLFKESEDDGRDDSS 134 VR+R+HH + EV+ +P S RP+ LE F+ E++ +D + Sbjct: 1022 VRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLEPTFEIEEEEEEEDEN 1076
>HMSH_DROME (Q03372) Muscle segmentation homeobox (Protein drop) (Protein msh)| Length = 515 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -3 Query: 204 ASGPSNFWSSFSRKARTMAGMIPLTPPPSTLRMVTTFAWSPAAI 73 A GP N SS + + A P PP S V + PAA+ Sbjct: 153 ADGPQNLTSSAATSPISQASSTPPPPPASAAAQVPANTFHPAAV 196
>MYLK_MOUSE (Q6PDN3) Myosin light chain kinase, smooth muscle and non-muscle| isozymes (EC 2.7.11.18) (MLCK) [Contains: Telokin (Kinase-related protein) (KRP)] Length = 1941 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 8/43 (18%) Frame = +1 Query: 259 DGDAHGA--------GQGWPAAVRRQGSGQVLHRRVAQNLPTE 363 DGD HG GQGWP + +L RRV L TE Sbjct: 830 DGDRHGTLRPCWPARGQGWPEEEDGEDVRGLLKRRVETRLHTE 872
>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Runt-related transcription factor-binding protein 2) (Monocytic leukemia zinc finger protein) (Zinc finger protei Length = 2004 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = -2 Query: 283 VRRREHHRQEAPGARAGDDIEVVRDP-----SIRPVQFLELLFKESEDDGRDDSS 134 VR+R+HH + EV+ +P S RP+ LE F+ E++ +D + Sbjct: 1023 VRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLEPTFEIDEEEEEEDEN 1077
>TBX2_CANFA (Q863A2) T-box transcription factor TBX2 (T-box protein 2)| Length = 702 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = -3 Query: 240 VPATTSK*SAILASGP---SNFWSSFSRKARTMAGMIPLTPPPSTLRMVTTFA 91 +PAT++ +A A+G S+F S + R IP+T PPST + T A Sbjct: 580 LPATSAAAAAAAAAGSLSRSHFLGSARPRLRFSPYQIPVTIPPSTSLLTTGLA 632
>BGAL_KLULA (P00723) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1025 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -2 Query: 172 FKESEDDGRDDSSHAAAVDAQDGHHLRLVTCCHHFG 65 FK S++ G D+++HA V H+LRL H G Sbjct: 962 FKISDEYGVDEAAHACDVKRYGRHYLRLDHAIHGVG 997
>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112| Length = 2799 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -3 Query: 180 SSFSRKARTMAGMIPLTPPPSTLRMVTTFAWSPAAITLEFANTSTS 43 ++++ T P TP +TL +T+F +SP + E + TS Sbjct: 1744 TNYATSLNTPVSYPPWTPSSATLPSLTSFVYSPHSTEAEISTPKTS 1789
>APT_CLOPE (Q8XJ22) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)| Length = 172 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 83 GDQAKVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDAR 208 G K +T L DG G+R + + F +K + + GP+AR Sbjct: 17 GISFKDITTLIADGEGLRDSVDQMAEFFKDKNIDVVVGPEAR 58
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 28.1 bits (61), Expect = 8.8 Identities = 22/91 (24%), Positives = 46/91 (50%) Frame = -3 Query: 315 SLPSNSGRPSLSGAVSITVKRPPVLVPATTSK*SAILASGPSNFWSSFSRKARTMAGMIP 136 S ++S S S + + T P++TS S++ ++ S+ +S S+ + + + Sbjct: 202 STSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSS--TSTSQSSTSTSSSST 259 Query: 135 LTPPPSTLRMVTTFAWSPAAITLEFANTSTS 43 T P ST ++ + SP++ + ++TSTS Sbjct: 260 STSPSSTSTSSSSTSTSPSSKSTSASSTSTS 290
>PA_IAVI7 (P31343) Polymerase acidic protein (RNA-directed RNA polymerase| subunit P2) Length = 716 Score = 28.1 bits (61), Expect = 8.8 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 19/99 (19%) Frame = +2 Query: 170 EKELQKLDGPDARIADYFDVVAGTSTGGLLTVMLTAPDKDGRP-------LFDGKD---- 316 E + +LD P+A + F+++ G TV+ + + G L+D K+ Sbjct: 59 ESIVVELDDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGAEKPKFLPDLYDYKENRFI 118 Query: 317 --------LAKFYIDESPKIFPQNCRGSIFSQIGSGLAT 409 + +Y++++ KI +N IFS G G+AT Sbjct: 119 EIGVTRREVHIYYLEKANKIKSENTHIHIFSFTGEGMAT 157
>YBBA_SCHPO (O60072) Putative helicase C13G1.10c (EC 3.6.1.-)| Length = 1935 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 215 DYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYIDESPKIF 355 +Y+D G LT +L + GRP FD +A+ ++ + K F Sbjct: 1473 EYYDAKIGGYKDMDLTDVLQMLGRAGRPQFDNSGVARIFVQDIKKSF 1519
>PRIM_LISMO (P47762) DNA primase (EC 2.7.7.-)| Length = 626 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +2 Query: 191 DGPDARIADYFDVVAGTSTGGLLTV--MLTAPDKDGRPLFDG--KDLAKFYIDESPKIFP 358 +G DA + D V + GL++ M+ +PD+ G+P F+ + L ++ +++ K Sbjct: 532 EGNDADPTKFMDSVPDAAMKGLISSLEMVISPDEQGKPQFEDYIRSLKRYKLEQKKKELE 591 Query: 359 Q 361 Q Sbjct: 592 Q 592
>ERF1_LOXST (Q5CD84) Eukaryotic peptide chain release factor subunit 1 (eRF1)| (Eukaryotic release factor 1) Length = 436 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +2 Query: 89 QAKVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAGTS 244 +AKVVTI+ V+ GG G AI L+ ++ + K I F+ VA S Sbjct: 245 RAKVVTIIDVNYGGENGFNQAIELSQVQLQNVKFIKEKNLITKLFEEVAQNS 296 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,392,168 Number of Sequences: 219361 Number of extensions: 1029459 Number of successful extensions: 4096 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3944 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4087 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
