ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_483854.1| Oryza sativa (japonica cultivar-group), mRNA 168 1e-38
2dbj|AK065186.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
4dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
5gb|AY103941.1| Zea mays PCO095480 mRNA sequence 64 4e-07
6gb|AC109581.2| Homo sapiens chromosome 3 clone RP11-168H3, compl... 44 0.38
7gb|AC133010.2| Homo sapiens chromosome 3 clone RP13-597L11, comp... 44 0.38
8gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.5
9gb|BT014170.1| Lycopersicon esculentum clone 133309F, mRNA sequence 42 1.5
10emb|AL133472.12| Human DNA sequence from clone RP1-177C7 on chro... 42 1.5
11emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 42 1.5
12gb|AY112201.1| Zea mays CL4163_1 mRNA sequence 42 1.5
13gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.5
14gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, co... 40 5.9
15gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, comp... 40 5.9
16gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 5.9
17gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's ... 40 5.9
18gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's ... 40 5.9
19ref|XM_367879.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 5.9
20gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 5.9
21gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 5.9
22gb|AY359575.1| Zea mays W64A acc oxidase (ACO20) mRNA, complete cds 40 5.9
23gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosom... 40 5.9
24gb|AY359574.1| Zea mays B73 acc oxidase (ACO20) gene, partial cds 40 5.9
25gb|AF211176.2| Botryotinia fuckeliana cystathionine beta-lyase (... 40 5.9
26ref|XM_445693.1| Candida glabrata CBS138, CAGL0D06622g partial mRNA 40 5.9
27emb|CR665470.2|CNS0FCG4 Tetraodon nigroviridis full-length cDNA 40 5.9
28gb|CP000001.1| Bacillus cereus E33L, complete genome 40 5.9
29ref|XM_781506.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.9
30emb|CR380950.1| Candida glabrata strain CBS138 chromosome D comp... 40 5.9
31gb|AY233907.1| Ceratocystis polonica strain CMW5026 internal tra... 40 5.9
32gb|AY233906.1| Ceratocystis polonica strain CMW1165 internal tra... 40 5.9
33gb|AY233905.1| Ceratocystis polonica strain CMW7149 internal tra... 40 5.9
34gb|AY233904.1| Ceratocystis polonica strain CMW7143 internal tra... 40 5.9
35gb|AY233903.1| Ceratocystis polonica strain CMW7133 internal tra... 40 5.9
36gb|AY233902.1| Ceratocystis polonica strain CMW7152 internal tra... 40 5.9
37gb|AY233901.1| Ceratocystis polonica strain CMW1164 internal tra... 40 5.9
38gb|AY233900.1| Ceratocystis polonica strain CMW7754 internal tra... 40 5.9
39gb|AY233899.1| Ceratocystis polonica strain CMW7748 internal tra... 40 5.9
40gb|AY233898.1| Ceratocystis polonica strain CMW10522 internal tr... 40 5.9
41gb|AY233897.1| Ceratocystis polonica strain CMW2210 internal tra... 40 5.9
42gb|AY233896.1| Ceratocystis polonica strain CMW7151 internal tra... 40 5.9
43gb|AY233895.1| Ceratocystis polonica strain CMW2286 internal tra... 40 5.9
44gb|AY233894.1| Ceratocystis polonica strain CMW2284 internal tra... 40 5.9
45gb|AY233893.1| Ceratocystis polonica strain CMW2272 internal tra... 40 5.9
46gb|AY233892.1| Ceratocystis polonica strain CMW7138 internal tra... 40 5.9
47gb|AY233891.1| Ceratocystis polonica strain CMW8874 internal tra... 40 5.9
48gb|AY233890.1| Ceratocystis polonica strain CMW8845 internal tra... 40 5.9
49gb|AY233889.1| Ceratocystis polonica strain CMW8830 internal tra... 40 5.9
50gb|AY233888.1| Ceratocystis polonica strain CMW8873 internal tra... 40 5.9
51emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chr... 40 5.9
52emb|BX470109.3| Mouse DNA sequence from clone RP23-59I3 on chrom... 40 5.9
53emb|BX323006.12| Zebrafish DNA sequence from clone CH211-145H19 ... 40 5.9
54dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 5.9
55emb|BX470247.5| Zebrafish DNA sequence from clone DKEY-96N2 in l... 40 5.9
56gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete seq... 40 5.9
57gb|AC025018.6| Homo sapiens chromosome 18, clone RP11-320C19, co... 40 5.9
58ref|XM_685844.1| PREDICTED: Danio rerio similar to p130Cas-assoc... 40 5.9
59emb|AL111267.1|CNS0196Z Botrytis cinerea strain T4 cDNA library 40 5.9
60dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
61dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
62dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
63gb|DQ000647.1| Tetraodon nigroviridis interleukin enhancer bindi... 40 5.9
64dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.9
65dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
66dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
67dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
68dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
69emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, ... 40 5.9
70dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
71dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
72dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
73emb|CT030234.9| M.truncatula DNA sequence from clone MTH2-22I15 ... 40 5.9
74gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 5.9
75gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
76emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.9
77gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, comple... 40 5.9
78gb|AC131699.4| Mus musculus BAC clone RP23-440F17 from 1, comple... 40 5.9
79emb|AL714023.12| Mouse DNA sequence from clone RP23-12H6 on chro... 40 5.9
80gb|AC167197.6| Mus musculus chromosome 1, clone RP23-62B14, comp... 40 5.9

>ref|XM_483854.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1538

 Score =  168 bits (85), Expect = 1e-38
 Identities = 240/291 (82%), Gaps = 3/291 (1%)
 Strand = Plus / Plus

                                                                       
Query: 151 gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaagac---gaccag 207
           ||||||||| |||| | |||||||| |||||||||||||||||||||| ||   ||||||
Sbjct: 309 gccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaacaccacgaccag 368

                                                                       
Query: 208 gccatgtcgatgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgca 267
           |||   || |||||||| ||  |||||||||| |||||||||||||||||||||||||||
Sbjct: 369 gccgcttcaatgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgca 428

                                                                       
Query: 268 ccacctgccatgcttcctgcaccttcttctgcaaagttaaacgagttgctactgccaaaa 327
           |||||  ||  ||| |||||||  |||||| |||||||| || || || |||| || || 
Sbjct: 429 ccaccaccctcgctacctgcacaatcttcttcaaagttagacaagctgttactccctaac 488

                                                                       
Query: 328 ccatttgacaggcctcgtgctgttttcttgatgcaaattgatggatcccatgactctgtc 387
           ||||||||||| || || |||||||||||| ||||||| ||||||| ||||| ||| || 
Sbjct: 489 ccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatgcctccgtt 548

                                                              
Query: 388 gatagcttcgtatctgatgccggtagtatttacaaaaccaagattgatggt 438
           || ||| ||  |||||| || ||||| || | ||||||||  |||||||||
Sbjct: 549 gaaagcatcacatctgaagctggtagcatcttcaaaaccactattgatggt 599



to top

>dbj|AK065186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D24, full
           insert sequence
          Length = 1538

 Score =  168 bits (85), Expect = 1e-38
 Identities = 240/291 (82%), Gaps = 3/291 (1%)
 Strand = Plus / Plus

                                                                       
Query: 151 gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaagac---gaccag 207
           ||||||||| |||| | |||||||| |||||||||||||||||||||| ||   ||||||
Sbjct: 309 gccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaacaccacgaccag 368

                                                                       
Query: 208 gccatgtcgatgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgca 267
           |||   || |||||||| ||  |||||||||| |||||||||||||||||||||||||||
Sbjct: 369 gccgcttcaatgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgca 428

                                                                       
Query: 268 ccacctgccatgcttcctgcaccttcttctgcaaagttaaacgagttgctactgccaaaa 327
           |||||  ||  ||| |||||||  |||||| |||||||| || || || |||| || || 
Sbjct: 429 ccaccaccctcgctacctgcacaatcttcttcaaagttagacaagctgttactccctaac 488

                                                                       
Query: 328 ccatttgacaggcctcgtgctgttttcttgatgcaaattgatggatcccatgactctgtc 387
           ||||||||||| || || |||||||||||| ||||||| ||||||| ||||| ||| || 
Sbjct: 489 ccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatgcctccgtt 548

                                                              
Query: 388 gatagcttcgtatctgatgccggtagtatttacaaaaccaagattgatggt 438
           || ||| ||  |||||| || ||||| || | ||||||||  |||||||||
Sbjct: 549 gaaagcatcacatctgaagctggtagcatcttcaaaaccactattgatggt 599



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 217      atgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgcaccacc 272
                |||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 28387363 atgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgcaccacc 28387418



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 151      gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaa 198
                ||||||||| |||| | |||||||| ||||||||||||||||||||||
Sbjct: 28387126 gccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaa 28387173



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 328      ccatttgacaggcctcgtgctgttttcttgatgcaaattgatggatcccatg 379
                ||||||||||| || || |||||||||||| ||||||| ||||||| |||||
Sbjct: 28387558 ccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatg 28387609



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 77      tcctcctccttcctctcatc 96
               ||||||||||||||||||||
Sbjct: 1020271 tcctcctccttcctctcatc 1020290



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     tcctcctccttcctctcatc 96
              ||||||||||||||||||||
Sbjct: 685270 tcctcctccttcctctcatc 685251



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     tcctcctccttcctctcatc 96
              ||||||||||||||||||||
Sbjct: 499586 tcctcctccttcctctcatc 499605



to top

>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0044E16
          Length = 153296

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                      
Query: 217    atgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgcaccacc 272
              |||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 116169 atgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgcaccacc 116224



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                              
Query: 151    gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaa 198
              ||||||||| |||| | |||||||| ||||||||||||||||||||||
Sbjct: 115932 gccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaa 115979



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 328    ccatttgacaggcctcgtgctgttttcttgatgcaaattgatggatcccatg 379
              ||||||||||| || || |||||||||||| ||||||| ||||||| |||||
Sbjct: 116364 ccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatg 116415



to top

>gb|AY103941.1| Zea mays PCO095480 mRNA sequence
          Length = 1596

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 100/122 (81%), Gaps = 3/122 (2%)
 Strand = Plus / Plus

                                                                       
Query: 151 gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaagacgac---cag 207
           |||| ||||||||| | | |||||||||||||||| ||||| ||||||| ||||   |||
Sbjct: 225 gccgtcttcatcgatgcctcgtcgcaccgctaccttcgggaccagcaagccgaccaccag 284

                                                                       
Query: 208 gccatgtcgatgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgca 267
           | |   || |||||  |  ||||||||||||| | ||||||||||||||||||||| |||
Sbjct: 285 gacgcttcaatgtcgttaaatgaagtttctgcggttgtttctgtcttgcttggtttcgca 344

             
Query: 268 cc 269
           ||
Sbjct: 345 cc 346



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 328 ccatttgacaggcctcgtgctgttttcttgatgcaaattgatgg 371
           |||||||| || || |||||||||||| |  |||||||||||||
Sbjct: 405 ccatttgatagaccgcgtgctgttttcctcgtgcaaattgatgg 448



to top

>gb|AC109581.2| Homo sapiens chromosome 3 clone RP11-168H3, complete sequence
          Length = 155332

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 75     cctcctcctccttcctctcatc 96
              ||||||||||||||||||||||
Sbjct: 126726 cctcctcctccttcctctcatc 126705



to top

>gb|AC133010.2| Homo sapiens chromosome 3 clone RP13-597L11, complete sequence
          Length = 165036

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 75   cctcctcctccttcctctcatc 96
            ||||||||||||||||||||||
Sbjct: 8399 cctcctcctccttcctctcatc 8378



to top

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 50     ggcgaccatggcttgccggcg 70
              |||||||||||||||||||||
Sbjct: 101198 ggcgaccatggcttgccggcg 101218



to top

>gb|BT014170.1| Lycopersicon esculentum clone 133309F, mRNA sequence
          Length = 1482

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 251 tcttgcttggttttgcaccacctgc 275
           ||||||||||||||||||| |||||
Sbjct: 208 tcttgcttggttttgcacctcctgc 232



to top

>emb|AL133472.12| Human DNA sequence from clone RP1-177C7 on chromosome 6 Contains the 5'
             end of the gene for a novel protein (FLJ30976) and the 5'
             end of the KIAA0274 gene (similar to the novel protein
             CG17840). Contains a CpG island, complete sequence
          Length = 87434

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 73    tgcctcctcctccttcctctc 93
             |||||||||||||||||||||
Sbjct: 18990 tgcctcctcctccttcctctc 19010



to top

>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 151    gccgccttcatcgacggcgcg 171
              |||||||||||||||||||||
Sbjct: 187020 gccgccttcatcgacggcgcg 187000



to top

>gb|AY112201.1| Zea mays CL4163_1 mRNA sequence
          Length = 1038

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 cgccttcatcgacggcgcgtc 173
           |||||||||||||||||||||
Sbjct: 654 cgccttcatcgacggcgcgtc 674



to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 153     cgccttcatcgacggcgcgtc 173
               |||||||||||||||||||||
Sbjct: 2501776 cgccttcatcgacggcgcgtc 2501756



to top

>gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, complete sequence
          Length = 189241

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    agtatttacaaaaccaagat 431
              ||||||||||||||||||||
Sbjct: 184354 agtatttacaaaaccaagat 184373



to top

>gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, complete sequence
          Length = 194413

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    agtatttacaaaaccaagat 431
              ||||||||||||||||||||
Sbjct: 121184 agtatttacaaaaccaagat 121165



to top

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     ttttcttgatgcaaattgat 369
               ||||||||||||||||||||
Sbjct: 3154069 ttttcttgatgcaaattgat 3154088



to top

>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 204000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    cctcctcctccttcctctca 94
             ||||||||||||||||||||
Sbjct: 69996 cctcctcctccttcctctca 69977



to top

>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 227955

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     tgcctcctcctccttcctct 92
              ||||||||||||||||||||
Sbjct: 107135 tgcctcctcctccttcctct 107116



to top

>ref|XM_367879.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG07783.4) partial mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 133 ggtcagggacacgccgctgccgcc 156
           |||||||||| |||||||||||||
Sbjct: 555 ggtcagggactcgccgctgccgcc 578



to top

>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     ttttcttgatgcaaattgat 369
               ||||||||||||||||||||
Sbjct: 3076174 ttttcttgatgcaaattgat 3076193



to top

>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     ttttcttgatgcaaattgat 369
               ||||||||||||||||||||
Sbjct: 3076740 ttttcttgatgcaaattgat 3076759



to top

>gb|AY359575.1| Zea mays W64A acc oxidase (ACO20) mRNA, complete cds
          Length = 1262

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 ccgccgtcgccgcccctgag 132
           ||||||||||||||||||||
Sbjct: 689 ccgccgtcgccgcccctgag 670



to top

>gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosome 10, complete sequence
          Length = 178936

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     cctcctcctccttcctctca 94
              ||||||||||||||||||||
Sbjct: 103899 cctcctcctccttcctctca 103880



to top

>gb|AY359574.1| Zea mays B73 acc oxidase (ACO20) gene, partial cds
          Length = 1516

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 ccgccgtcgccgcccctgag 132
           ||||||||||||||||||||
Sbjct: 470 ccgccgtcgccgcccctgag 451



to top

>gb|AF211176.2| Botryotinia fuckeliana cystathionine beta-lyase (metC) gene,
           complete cds
          Length = 2921

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ttgatgaagtttctgcagct 243
           ||||||||||||||||||||
Sbjct: 397 ttgatgaagtttctgcagct 378



to top

>ref|XM_445693.1| Candida glabrata CBS138, CAGL0D06622g partial mRNA
          Length = 3537

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 gtttctgtcttgcttggttt 263
           ||||||||||||||||||||
Sbjct: 283 gtttctgtcttgcttggttt 264



to top

>emb|CR665470.2|CNS0FCG4 Tetraodon nigroviridis full-length cDNA
          Length = 1441

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cctcctcctccttcctctca 94
            ||||||||||||||||||||
Sbjct: 1206 cctcctcctccttcctctca 1187



to top

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     ttttcttgatgcaaattgat 369
               ||||||||||||||||||||
Sbjct: 3123419 ttttcttgatgcaaattgat 3123438



to top

>ref|XM_781506.1| PREDICTED: Strongylocentrotus purpuratus similar to carcinoma
          related gene (LOC581513), mRNA
          Length = 848

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 73 tgcctcctcctccttcctct 92
          ||||||||||||||||||||
Sbjct: 87 tgcctcctcctccttcctct 68



to top

>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    gtttctgtcttgcttggttt 263
              ||||||||||||||||||||
Sbjct: 632577 gtttctgtcttgcttggttt 632596



to top

>gb|AY233907.1| Ceratocystis polonica strain CMW5026 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233906.1| Ceratocystis polonica strain CMW1165 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233905.1| Ceratocystis polonica strain CMW7149 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233904.1| Ceratocystis polonica strain CMW7143 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233903.1| Ceratocystis polonica strain CMW7133 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233902.1| Ceratocystis polonica strain CMW7152 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233901.1| Ceratocystis polonica strain CMW1164 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233900.1| Ceratocystis polonica strain CMW7754 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233899.1| Ceratocystis polonica strain CMW7748 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233898.1| Ceratocystis polonica strain CMW10522 internal transcribed spacer
           1, 5.8S ribosomal RNA gene, and internal transcribed
           spacer 2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233897.1| Ceratocystis polonica strain CMW2210 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233896.1| Ceratocystis polonica strain CMW7151 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233895.1| Ceratocystis polonica strain CMW2286 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233894.1| Ceratocystis polonica strain CMW2284 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233893.1| Ceratocystis polonica strain CMW2272 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233892.1| Ceratocystis polonica strain CMW7138 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233891.1| Ceratocystis polonica strain CMW8874 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233890.1| Ceratocystis polonica strain CMW8845 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233889.1| Ceratocystis polonica strain CMW8830 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>gb|AY233888.1| Ceratocystis polonica strain CMW8873 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 tgccggtagtatttacaaaa 424
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99



to top

>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+
              transporting ATP synthase mitochondrial F0 complex subunit
              g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1)
              pseudogene, three novel genes, the gene for a novel ENTH
              domain containing protein, the 5' end of the Sox30 gene for
              SRY-box containing gene 30 and three Cpg islands, complete
              sequence
          Length = 207877

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    caccacctgccatgcttcct 285
              ||||||||||||||||||||
Sbjct: 126869 caccacctgccatgcttcct 126888



to top

>emb|BX470109.3| Mouse DNA sequence from clone RP23-59I3 on chromosome 4, complete
              sequence
          Length = 228869

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    atgccggtagtatttacaaa 423
              ||||||||||||||||||||
Sbjct: 124753 atgccggtagtatttacaaa 124772



to top

>emb|BX323006.12| Zebrafish DNA sequence from clone CH211-145H19 in linkage group 15,
              complete sequence
          Length = 161776

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    ttctgcagctgtttctgtct 253
              ||||||||||||||||||||
Sbjct: 129193 ttctgcagctgtttctgtct 129212



to top

>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 342     tcgtgctgttttcttgatgc 361
               ||||||||||||||||||||
Sbjct: 1817818 tcgtgctgttttcttgatgc 1817837



to top

>emb|BX470247.5| Zebrafish DNA sequence from clone DKEY-96N2 in linkage group 24,
             complete sequence
          Length = 59900

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   ccacctgccatgcttcctgc 287
             ||||||||||||||||||||
Sbjct: 18658 ccacctgccatgcttcctgc 18677



to top

>gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete sequence
          Length = 112570

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   tgcctcctcctccttcctct 92
            ||||||||||||||||||||
Sbjct: 8117 tgcctcctcctccttcctct 8136



to top

>gb|AC025018.6| Homo sapiens chromosome 18, clone RP11-320C19, complete sequence
          Length = 159942

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tgcctcctcctccttcctct 92
             ||||||||||||||||||||
Sbjct: 88061 tgcctcctcctccttcctct 88042



to top

>ref|XM_685844.1| PREDICTED: Danio rerio similar to p130Cas-associated protein
            (p140Cap) (SNAP-25-interacting protein) (SNIP)
            (LOC562465), mRNA
          Length = 6326

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  ccacctgccatgcttcctgc 287
            ||||||||||||||||||||
Sbjct: 3050 ccacctgccatgcttcctgc 3069



to top

>emb|AL111267.1|CNS0196Z Botrytis cinerea strain T4 cDNA library
          Length = 780

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 ttgatgaagtttctgcagct 243
           ||||||||||||||||||||
Sbjct: 261 ttgatgaagtttctgcagct 280



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 271      cctgccatgcttcctgcacc 290
                ||||||||||||||||||||
Sbjct: 13900542 cctgccatgcttcctgcacc 13900523



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 144      cgccgctgccgccttcatcg 163
                ||||||||||||||||||||
Sbjct: 16899790 cgccgctgccgccttcatcg 16899771



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 77      tcctcctccttcctctcatc 96
               ||||||||||||||||||||
Sbjct: 8956987 tcctcctccttcctctcatc 8956968



to top

>gb|DQ000647.1| Tetraodon nigroviridis interleukin enhancer binding factor 2 (ILF2)
            mRNA, complete cds
          Length = 1380

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cctcctcctccttcctctca 94
            ||||||||||||||||||||
Sbjct: 1162 cctcctcctccttcctctca 1143



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 151     gccgccttcatcgacggcgc 170
               ||||||||||||||||||||
Sbjct: 8802346 gccgccttcatcgacggcgc 8802365



to top

>dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1423D04
          Length = 154474

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   cgccgctgccgccttcatcg 163
             ||||||||||||||||||||
Sbjct: 32812 cgccgctgccgccttcatcg 32793



to top

>dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0025G03
          Length = 139560

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    cgccgctgccgccttcatcg 163
              ||||||||||||||||||||
Sbjct: 129948 cgccgctgccgccttcatcg 129929



to top

>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     tcctcctccttcctctcatc 96
              ||||||||||||||||||||
Sbjct: 183009 tcctcctccttcctctcatc 183028



to top

>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0060K08
          Length = 159626

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    tcctcctccttcctctcatc 96
             ||||||||||||||||||||
Sbjct: 29596 tcctcctccttcctctcatc 29577



to top

>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence
          Length = 256446

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    ttctgcagctgtttctgtct 253
              ||||||||||||||||||||
Sbjct: 249740 ttctgcagctgtttctgtct 249721



to top

>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0007D08
          Length = 183142

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    tcctcctccttcctctcatc 96
             ||||||||||||||||||||
Sbjct: 89546 tcctcctccttcctctcatc 89565



to top

>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498H04
          Length = 151046

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     tcctcctccttcctctcatc 96
              ||||||||||||||||||||
Sbjct: 112648 tcctcctccttcctctcatc 112629



to top

>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1005_B05
          Length = 144799

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    tcctcctccttcctctcatc 96
             ||||||||||||||||||||
Sbjct: 48798 tcctcctccttcctctcatc 48817



to top

>emb|CT030234.9| M.truncatula DNA sequence from clone MTH2-22I15 on chromosome 3,
             complete sequence
          Length = 112511

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 76    ctcctcctccttcctctcatcgcgctcg 103
             ||||||||||||| ||||||||| ||||
Sbjct: 47393 ctcctcctccttcttctcatcgctctcg 47366



to top

>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     ttttcttgatgcaaattgat 369
               ||||||||||||||||||||
Sbjct: 3076046 ttttcttgatgcaaattgat 3076065



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 271      cctgccatgcttcctgcacc 290
                ||||||||||||||||||||
Sbjct: 13854822 cctgccatgcttcctgcacc 13854803



to top

>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144552

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   cctgccatgcttcctgcacc 290
             ||||||||||||||||||||
Sbjct: 37170 cctgccatgcttcctgcacc 37151



to top

>gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, complete sequence
          Length = 225031

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     ctcctcctccttcctctcat 95
              ||||||||||||||||||||
Sbjct: 117856 ctcctcctccttcctctcat 117875



to top

>gb|AC131699.4| Mus musculus BAC clone RP23-440F17 from 1, complete sequence
          Length = 200544

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 372    atcccatgactctgtcgata 391
              ||||||||||||||||||||
Sbjct: 134929 atcccatgactctgtcgata 134948



to top

>emb|AL714023.12| Mouse DNA sequence from clone RP23-12H6 on chromosome 2, complete
             sequence
          Length = 211570

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tgcctcctcctccttcctct 92
             ||||||||||||||||||||
Sbjct: 93133 tgcctcctcctccttcctct 93152



to top

>gb|AC167197.6| Mus musculus chromosome 1, clone RP23-62B14, complete sequence
          Length = 220763

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 372    atcccatgactctgtcgata 391
              ||||||||||||||||||||
Sbjct: 117451 atcccatgactctgtcgata 117470


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,818,843
Number of Sequences: 3902068
Number of extensions: 4818843
Number of successful extensions: 145760
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144635
Number of HSP's gapped (non-prelim): 1123
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top