Clone Name | bart50d07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LRC4B_MOUSE (P0C192) Leucine-rich repeat-containing protein 4B p... | 30 | 2.3 | 2 | LRC4B_HUMAN (Q9NT99) Leucine-rich repeat-containing protein 4B p... | 29 | 5.2 |
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>LRC4B_MOUSE (P0C192) Leucine-rich repeat-containing protein 4B precursor| Length = 709 Score = 30.0 bits (66), Expect = 2.3 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -3 Query: 410 GGSLSRPRGQHREPRLPRPQGAWAAGR 330 G +PRG +EP P GAW GR Sbjct: 499 GEEAQQPRGTEKEPPGPTTDGAWGGGR 525
>LRC4B_HUMAN (Q9NT99) Leucine-rich repeat-containing protein 4B precursor| Length = 713 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = -3 Query: 410 GGSLSRPRGQHREPRLPRPQGAWAAGRCG 324 G +PRG +EP P G W GR G Sbjct: 500 GEEALQPRGTEKEPPGPTTDGVWGGGRPG 528 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,325,408 Number of Sequences: 219361 Number of extensions: 322836 Number of successful extensions: 1116 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1084 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1115 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)