Clone Information

BLAST Search Result

Clone Name	bart50c09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS3A_ARATH (Q42262) 40S ribosomal protein S3a	175	3e-44
2	RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)	174	8e-44
3	RS3A_HELAN (P49198) 40S ribosomal protein S3a	172	3e-43
4	RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific ...	171	5e-43
5	RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)	167	1e-41
6	RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a	140	9e-34
7	RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformatio...	136	2e-32
8	RS3A_MOUSE (P97351) 40S ribosomal protein S3a	136	2e-32
9	RS3A_HUMAN (P61247) 40S ribosomal protein S3a	136	2e-32
10	RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a	136	2e-32
11	RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)	136	2e-32
12	RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a	136	2e-32
13	RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)	136	2e-32
14	RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)	136	2e-32
15	RS3A_XENTR (Q642T2) 40S ribosomal protein S3a	135	3e-32
16	RS3A_XENLA (Q801S3) 40S ribosomal protein S3a	135	3e-32
17	RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformat...	135	3e-32
18	RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a	134	7e-32
19	RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a	134	7e-32
20	RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a	134	9e-32
21	RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a	133	1e-31
22	RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)	132	3e-31
23	RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)	132	4e-31
24	RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)	131	7e-31
25	RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich prote...	130	1e-30
26	RS3A_CAEEL (P48154) 40S ribosomal protein S3a	129	3e-30
27	RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)	126	2e-29
28	RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)	126	2e-29
29	RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)	125	3e-29
30	RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae	52	6e-07
31	RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae	51	1e-06
32	RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae	50	2e-06
33	RS3A_METTH (O27630) 30S ribosomal protein S3Ae	50	2e-06
34	RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae	49	5e-06
35	RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae	48	8e-06
36	RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae	47	2e-05
37	RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae	47	2e-05
38	RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae	46	3e-05
39	RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae	45	9e-05
40	RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae	44	1e-04
41	RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae	43	3e-04
42	RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae	42	4e-04
43	RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae	40	0.002
44	RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae	39	0.005
45	RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae	36	0.042
46	RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae	34	0.16
47	MNR2_YEAST (P35724) Manganese resistance protein MNR2	30	1.8
48	LAT_HUMAN (O43561) Linker for activation of T-cells family membe...	30	2.3
49	SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sul...	30	2.3
50	RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF	30	3.0
51	LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-bind...	29	3.9
52	HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specif...	29	5.1
53	VG78_ICHV1 (Q00167) Hypothetical gene 78 zinc-binding protein	28	6.7
54	YL54_CAEEL (P34434) Hypothetical protein F44E2.4	28	8.8
55	AMPN_STRLI (Q11010) Aminopeptidase N (EC 3.4.11.2) (Lysyl aminop...	28	8.8

>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score =  175 bits (444), Expect = 3e-44
 Identities = 86/95 (90%), Positives = 89/95 (93%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           AVDPF+KK WYD+KAP  FT+RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDN 78

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           AYRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV
Sbjct: 79  AYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLV 113

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>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 261

 Score =  174 bits (441), Expect = 8e-44
 Identities = 85/94 (90%), Positives = 87/94 (92%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF KK WYDIKAP +F  RN+GKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           YRKIRLRAEDVQG NVLTNFWGM FTTDKLRSLV
Sbjct: 80  YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLV 113

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>RS3A_HELAN (P49198) 40S ribosomal protein S3a|
          Length = 259

 Score =  172 bits (436), Expect = 3e-43
 Identities = 84/95 (88%), Positives = 88/95 (92%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A DPF+KK WYDIKAP LF +RNVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDH 78

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +YRKIRLRAEDVQG NVLTNFWGMD TTDKLRSLV
Sbjct: 79  SYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLV 113

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>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score =  171 bits (434), Expect = 5e-43
 Identities = 85/94 (90%), Positives = 85/94 (90%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF KK WYDIKAP  FT RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADL  DEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           YRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV
Sbjct: 80  YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLV 113

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>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 259

 Score =  167 bits (422), Expect = 1e-41
 Identities = 79/95 (83%), Positives = 87/95 (91%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A DPF KK WYDIKAP +F+ RNVGKTLV+RTQGTKIASEGL+HRVFE+SLADLQ DED 
Sbjct: 19  AADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDH 78

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           ++RKIRLRAED+QG NVLTNFWGMDFTTDKLRSLV
Sbjct: 79  SFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLV 113

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>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a|
          Length = 247

 Score =  140 bits (354), Expect = 9e-34
 Identities = 72/94 (76%), Positives = 77/94 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYDIKAP        G+    RT GTKIAS+GL  RVFEVSLADLQNDEDQA
Sbjct: 20  VDPFSKKDWYDIKAPPRSRRARSGRRC-HRTAGTKIASDGLNFRVFEVSLADLQNDEDQA 78

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RKI+LRAEDVQG NVLTNFWGMDFTTDKLRSLV
Sbjct: 79  FRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLV 112

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>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector|
           protein) [Contains: 40S ribosomal protein S3b]
          Length = 263

 Score =  136 bits (343), Expect = 2e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_MOUSE (P97351) 40S ribosomal protein S3a|
          Length = 263

 Score =  136 bits (343), Expect = 2e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_HUMAN (P61247) 40S ribosomal protein S3a|
          Length = 263

 Score =  136 bits (343), Expect = 2e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a|
          Length = 263

 Score =  136 bits (343), Expect = 2e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)|
          Length = 263

 Score =  136 bits (343), Expect = 2e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMV 113

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>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a|
          Length = 263

 Score =  136 bits (343), Expect = 2e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)|
          Length = 260

 Score =  136 bits (343), Expect = 2e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 18  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 76

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 77  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 110

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>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)|
          Length = 255

 Score =  136 bits (342), Expect = 2e-32
 Identities = 64/94 (68%), Positives = 79/94 (84%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFT+K W+DIKAP  F +RNVGKTL++R+ G K A++GLK RVFEV LADLQ  ED +
Sbjct: 20  VDPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHS 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           YRKI+LR ++VQG N+LTNF G+DFT+DKLRSLV
Sbjct: 80  YRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLV 113

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>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a|
          Length = 263

 Score =  135 bits (341), Expect = 3e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a|
          Length = 263

 Score =  135 bits (341), Expect = 3e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector|
           protein)
          Length = 265

 Score =  135 bits (341), Expect = 3e-32
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a|
          Length = 266

 Score =  134 bits (338), Expect = 7e-32
 Identities = 67/94 (71%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a|
          Length = 263

 Score =  134 bits (338), Expect = 7e-32
 Identities = 67/94 (71%), Positives = 77/94 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK  VFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGHVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a|
          Length = 263

 Score =  134 bits (337), Expect = 9e-32
 Identities = 67/94 (71%), Positives = 77/94 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N L NF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMV 113

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>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a|
          Length = 265

 Score =  133 bits (335), Expect = 1e-31
 Identities = 66/94 (70%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RV+EVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L  EDVQG N LTNF GMD T DK+ S+V
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMV 113

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>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)|
          Length = 254

 Score =  132 bits (333), Expect = 3e-31
 Identities = 63/94 (67%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHS 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RKI+LR ++VQG N+LTNF GMDFTTDKLRS+V
Sbjct: 80  FRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMV 113

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>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)|
          Length = 254

 Score =  132 bits (331), Expect = 4e-31
 Identities = 62/94 (65%), Positives = 78/94 (82%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHS 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK++LR ++VQG N+LTNF GMDFTTDKLRS+V
Sbjct: 80  FRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMV 113

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>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)|
          Length = 268

 Score =  131 bits (329), Expect = 7e-31
 Identities = 66/96 (68%), Positives = 79/96 (82%), Gaps = 2/96 (2%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQN--DED 312
           VDPFT+K WYD+KAP +F +R  GKTLV+RTQGTKIAS+GLK RVFEVSLADLQN  D +
Sbjct: 21  VDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAE 80

Query: 313 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +++RK +L AE V G +VLTNF GM  TTDKLRS+V
Sbjct: 81  RSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMV 116

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>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)|
          Length = 264

 Score =  130 bits (328), Expect = 1e-30
 Identities = 66/94 (70%), Positives = 77/94 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFTKK+WYD+KAP +F  R +GKTLV+R+QGTKIAS+ LK RVFEVSLADLQNDE   
Sbjct: 21  VDPFTKKEWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDE-VT 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK +L AE+VQG NVLTNF GM  T DKL S+V
Sbjct: 80  FRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMV 113

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>RS3A_CAEEL (P48154) 40S ribosomal protein S3a|
          Length = 256

 Score =  129 bits (324), Expect = 3e-30
 Identities = 66/95 (69%), Positives = 76/95 (80%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           AVDPF++K+WYDIKAP +F +R VGKTL++RTQGTKIASEGLK RVFEVSL DL N E  
Sbjct: 18  AVDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEAD 77

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            +RK +L AEDVQG NVLTNF  M  T DKL S+V
Sbjct: 78  -FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIV 111

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>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)|
          Length = 267

 Score =  126 bits (317), Expect = 2e-29
 Identities = 64/96 (66%), Positives = 77/96 (80%), Gaps = 2/96 (2%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 312
           VDPF++K WYD+KAP +F +R +GKTLV+RTQG +IAS+ LK RVFEVSLADLQ D D  
Sbjct: 21  VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPE 80

Query: 313 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +++RK RL AEDVQ  NVL NF GMD TTDK RS+V
Sbjct: 81  RSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMV 116

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>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)|
          Length = 251

 Score =  126 bits (316), Expect = 2e-29
 Identities = 59/94 (62%), Positives = 76/94 (80%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF++K+WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ A
Sbjct: 20  VDPFSRKEWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK++LR ED+QG + LT+F G+  T+DKLRSLV
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLV 113

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>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)|
          Length = 251

 Score =  125 bits (315), Expect = 3e-29
 Identities = 59/94 (62%), Positives = 75/94 (79%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF++K WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ +
Sbjct: 20  VDPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHS 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           +RK++LR ED+QG + LT+F G D T+DKLRSLV
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLV 113

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>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 34/95 (35%), Positives = 45/95 (47%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +
Sbjct: 11  AKDKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVMNRVVEVTLKDITGDFTK 63

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            + K+  +  DV+G N  T F GM      +RSLV
Sbjct: 64  GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLV 98

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>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 33/93 (35%), Positives = 45/93 (48%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +++
Sbjct: 11  DKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDVTGDFTKSH 63

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            K+  +  DV+G N  T F GM      +RSLV
Sbjct: 64  VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLV 96

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>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 34/95 (35%), Positives = 45/95 (47%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +
Sbjct: 10  AKDKWKLKQWYVIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDITGDFLK 62

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            + K+  +  DV+G N  T F GM      +RSLV
Sbjct: 63  GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLV 97

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>RS3A_METTH (O27630) 30S ribosomal protein S3Ae|
          Length = 195

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 30/93 (32%), Positives = 48/93 (51%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D + +K+WY IK+P LF    +G      T  ++     LK RV E ++ +L  D  + Y
Sbjct: 11  DTWKEKKWYVIKSPKLFGENEIG------TTPSRDPDFLLKRRV-EATMRELTGDFSKQY 63

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            K++ + + V G    T F G   TTD +RS++
Sbjct: 64  VKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMI 96

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>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae|
          Length = 200

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 31/95 (32%), Positives = 44/95 (46%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  K+WY + AP  F S+ +G T            E +  RV E +L DL  D  +
Sbjct: 13  AKDKWKMKEWYIVYAPDFFGSKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTK 65

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            + K+  +  DV+G N  T F G       +RSLV
Sbjct: 66  GHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLV 100

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>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 28/93 (30%), Positives = 47/93 (50%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           DP+  K+W+ + AP       +G   ++     +  ++ L  R  EVSL D+  D     
Sbjct: 20  DPWALKKWFSVYAPSY-----LGGVFLAEVPANE--AQKLLMRTLEVSLYDITKDISHLP 72

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            K++ +   V+G+  LT F G++ T D +RSLV
Sbjct: 73  IKLKFQIHRVEGLKALTRFKGLELTRDYIRSLV 105

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>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae|
          Length = 203

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 29/94 (30%), Positives = 46/94 (48%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           +D +  K+WY+I+AP+      VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPVYLNRAIVGNTMAG-------DPSLLVGRNVETTVGELTNDMTKN 62

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
             K+ LR  +V G    T+  G + TTD +RS+V
Sbjct: 63  NTKVILRINNVVGDIATTDLMGHELTTDYIRSIV 96

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>RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae|
          Length = 225

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 29/95 (30%), Positives = 48/95 (50%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  K WYDI     +T ++ G  ++ +T     A+  L  R+ E+SL DL N+  +
Sbjct: 15  AKDTWKSKVWYDI-----YTPQSFGGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSK 67

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
              ++  + + V G N  + F G D T + L+S V
Sbjct: 68  HMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQV 102

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>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQND--EDQ 315
           D +T K+W+ + AP  F    +G+T       +K+       R  E +LA+L ND     
Sbjct: 12  DKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVVG-----RTVETTLAELTNDYSNQN 64

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSL 417
            Y+K+  +   V G N  T FW  + T + L SL
Sbjct: 65  TYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSL 98

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>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae|
          Length = 204

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 29/94 (30%), Positives = 45/94 (47%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           +D +  K+WY+I+AP       VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPAYLNRVIVGTTMAG-------DPSLLVGRNVETTVGELTNDMTKN 62

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
             K+ LR  +V G    T+  G + TTD +RS+V
Sbjct: 63  NTKVILRVNNVVGDIATTDLMGHELTTDYVRSIV 96

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>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 30/93 (32%), Positives = 44/93 (47%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  K WY I AP +F +  VG+T            E +  RV E +L D+ +D  + +
Sbjct: 4   DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            K+  R  DV+G    + F G     D +RSLV
Sbjct: 57  IKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLV 89

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>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae|
          Length = 213

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 26/89 (29%), Positives = 41/89 (46%)
 Frame = +1

Query: 154 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 333
           +K+WY ++AP  F    +GKT            + +  R  E +L +L ND  +   K+ 
Sbjct: 12  QKRWYTVQAPEQFDREVLGKTPAEE-------PDKVLGRTIETTLGELTNDASENNTKLT 64

Query: 334 LRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            +  +V   +  T F   + T D LRSLV
Sbjct: 65  FKINEVASDSAYTEFIRHELTRDYLRSLV 93

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>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae|
          Length = 193

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 30/93 (32%), Positives = 46/93 (49%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  K+W+ I AP  F     G+ ++  T     A++ L  +V E +L DL  D    Y
Sbjct: 9   DKWKLKKWFTIVAPKTF-----GEVVLGTTPAFD-ANQALNRKV-ETTLYDLTGDYSLVY 61

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
             +  R   V+G  +LT F G + + D +RSLV
Sbjct: 62  VHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLV 94

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>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae|
          Length = 208

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTL---VSRTQGTKIASEGLKHRVFEVSLADLQNDED 312
           D +  K+WY +  P  F   ++G T    +++T G ++          E +L DL  D  
Sbjct: 10  DKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRV----------ETTLYDLTGDFS 59

Query: 313 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
           Q Y  +  +    +G  ++T F G + + D LRSL+
Sbjct: 60  QVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLI 95

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>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae|
          Length = 197

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  K+WY I AP +F     G+ L+  T    I ++ L  ++ EV+L DL  D +  Y
Sbjct: 11  DKWKLKKWYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVY 63

Query: 322 RKIRLRA-EDVQGMNVLTNFWGMDFTTDKLRSLV 420
             +  +   ++ G  + T F+G + + D +RSLV
Sbjct: 64  IHLYFKILGNISGDKLSTIFYGHELSRDYIRSLV 97

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>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae|
          Length = 206

 Score = 35.8 bits (81), Expect = 0.042
 Identities = 24/89 (26%), Positives = 42/89 (47%)
 Frame = +1

Query: 154 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 333
           +K+WY + AP  F    +G+TL           + +  R  + +L+D+++  D    K+ 
Sbjct: 12  EKRWYTVLAPEEFDRAELGETLAEE-------PDQVYDRTIQAALSDVRDGGDNNI-KLT 63

Query: 334 LRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            + +DV   +  T F   + T D  RSLV
Sbjct: 64  FQIDDVGSDSASTQFVQAELTRDYQRSLV 92

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>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 24/93 (25%), Positives = 41/93 (44%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           + + +K WY ++AP    S+ V   L          S  + +RV EV +++L  +  ++ 
Sbjct: 12  EKWKEKVWYTVEAPPYLGSKEVSVALGE-------DSNSMVNRVVEVPISELTGNFKKSN 64

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLV 420
            K   R  + +G    T F G     D +R LV
Sbjct: 65  EKALFRITNCEGTKCKTIFIGHYIGDDYIRRLV 97

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>MNR2_YEAST (P35724) Manganese resistance protein MNR2|
          Length = 969

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +1

Query: 187  LFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGMNV 366
            + +S N  + L+SR+    +A          + +  + ND +    KI +    V  MNV
Sbjct: 871  MVSSLNHYEKLLSRSHSNYLAQ-------INIDMTKVNNDMNDVLGKITILGTIVLPMNV 923

Query: 367  LTNFWGMD 390
            +T  WGM+
Sbjct: 924  ITGLWGMN 931

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>LAT_HUMAN (O43561) Linker for activation of T-cells family member 1 (36 kDa|
           phospho-tyrosine adapter protein) (pp36) (p36-38)
          Length = 262

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 251 EAILVPCVLDTRVLPTLRLVKSSGALMSYHCFLVNGS 141
           EAILVPCVL   +LP L ++ +    +  HC  + GS
Sbjct: 3   EAILVPCVLGLLLLPILAMLMA----LCVHCHRLPGS 35

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>SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate|
           adenylate transferase) (SAT) (ATP-sulfurylase)
          Length = 437

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 12/57 (21%)
 Frame = -2

Query: 157 SW*TDPRPSSCYPSS-------PWRCACSCRPPWLPLRVEW-----RRCGGWSGGLR 23
           +W T   PS+  PSS       PWR   SCRP  L    E      RR G   G LR
Sbjct: 298 AWVTTTVPSTPRPSSMTKCQRAPWRSRSSCRPHGLLQEAEQDCDDARRAGSHQGRLR 354

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>RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF|
          Length = 365

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -2

Query: 355 LAHPQHGV*SSCRPGPHRSEDQLEILQTP----GASGPLR 248
           L  P+     SCR GPHR E  L++  TP    G+SG  R
Sbjct: 242 LQRPEEERLGSCRVGPHRDEVSLQLGGTPARRFGSSGQQR 281

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>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3|
            precursor (LTBP-3)
          Length = 1302

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
 Frame = -2

Query: 136  PSSCYPSS----PWRCACSCRPPWLP 71
            P++C P      P    C CRPPW+P
Sbjct: 1088 PAACRPGRCVNLPGSYRCECRPPWVP 1113

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>HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specific,|
           mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic
           acid synthase) (Delta-aminolevulinate synthase)
           (Delta-ALA synthetase) (ALAS-E)
          Length = 583

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 200 RLVKSSGALMSYHCFLVNGSTAFFLLPFLP 111
           RL +  GAL+   CF+ N ST F L   LP
Sbjct: 240 RLHQKDGALVFSSCFVANDSTLFTLAKMLP 269

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>VG78_ICHV1 (Q00167) Hypothetical gene 78 zinc-binding protein|
          Length = 400

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 253 LRQSWYPVSWTRGSCRRCG 197
           L   WYP S TRG+C  CG
Sbjct: 143 LGADWYPKSRTRGTCGYCG 161

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>YL54_CAEEL (P34434) Hypothetical protein F44E2.4|
          Length = 1283

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 290  ARDTSNTRCFRPSEAILVPCVLDTRVLPTLRLVKSSGALMS 168
            A  T +    RP +A +VP     RV PTL  V SS  ++S
Sbjct: 971  AMSTPDICPIRPHQAPIVPINQPARVTPTLETVLSSSTMVS 1011

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>AMPN_STRLI (Q11010) Aminopeptidase N (EC 3.4.11.2) (Lysyl aminopeptidase)|
           (Lys-AP) (Alanine aminopeptidase)
          Length = 857

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +1

Query: 295 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSL 417
           L ND+D +Y K+RL   D Q + V+T   G DFT    R+L
Sbjct: 536 LLNDDDLSYAKVRL---DEQSLAVVTEHLG-DFTESLPRAL 572


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,749,607
Number of Sequences: 219361
Number of extensions: 1142722
Number of successful extensions: 3569
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 3435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3542
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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