Clone Information

BLAST Search Result

Clone Name	bart50c07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	VIAAT_RAT (O35458) Vesicular inhibitory amino acid transporter (...	53	4e-07
2	VIAAT_MOUSE (O35633) Vesicular inhibitory amino acid transporter...	51	2e-06
3	VIAAT_MACFA (Q95KE2) Vesicular inhibitory amino acid transporter...	49	5e-06
4	VIAAT_HUMAN (Q9H598) Vesicular inhibitory amino acid transporter...	48	1e-05
5	LTBP2_RAT (O35806) Latent transforming growth factor beta-bindin...	44	2e-04
6	AVT1_YEAST (P47082) Vacuolar amino acid transporter 1	44	2e-04
7	UNC47_CAEEL (P34579) Vesicular GABA transporter (Uncoordinated p...	41	0.002
8	LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-bind...	39	0.007
9	MMP9_RAT (P50282) Matrix metalloproteinase-9 precursor (EC 3.4.2...	36	0.056
10	LTBP2_MOUSE (O08999) Latent transforming growth factor beta-bind...	36	0.056
11	LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-bind...	34	0.16
12	SALL3_HUMAN (Q9BXA9) Sal-like protein 3 (Zinc finger protein SAL...	34	0.21
13	CHST2_MOUSE (Q80WV3) Carbohydrate sulfotransferase 2 (EC 2.8.2.-...	34	0.21
14	GP137_MOUSE (Q60865) GPI-anchored protein p137 (p137GPI)	33	0.28
15	BHLH3_MOUSE (Q99PV5) Class B basic helix-loop-helix protein 3 (b...	33	0.36
16	ENV_FLVCS (Q02077) Env polyprotein precursor [Contains: Coat pro...	33	0.36
17	GP137_HUMAN (Q14444) GPI-anchored protein p137 (p137GPI) (Membra...	33	0.36
18	NFYC_HUMAN (Q13952) Nuclear transcription factor Y subunit gamma...	33	0.47
19	AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Pro...	33	0.47
20	RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats pro...	33	0.47
21	NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)	32	0.62
22	RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats prote...	32	0.80
23	CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21	31	1.4
24	RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nog...	31	1.4
25	DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)	31	1.4
26	DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)	31	1.4
27	ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B	31	1.4
28	SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)	31	1.8
29	TMCC2_MOUSE (Q80W04) Transmembrane and coiled-coil domains prote...	30	2.3
30	ELN_MOUSE (P54320) Elastin precursor (Tropoelastin)	30	2.3
31	SCEL_MOUSE (Q9EQG3) Sciellin	30	2.3
32	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	30	2.3
33	WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family mem...	30	2.3
34	KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-a...	30	2.3
35	TRME_PSEAE (Q9HT07) Probable tRNA modification GTPase trmE	30	2.3
36	CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)	30	2.3
37	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	30	2.3
38	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	30	2.3
39	SUDX_DROME (Q9Y0H4) E3 ubiquitin-protein ligase suppressor of de...	26	2.4
40	IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)	30	3.1
41	ZAN_PIG (Q28983) Zonadhesin precursor	30	3.1
42	ENV_FLVCA (Q02076) Env polyprotein precursor [Contains: Coat pro...	30	3.1
43	DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor...	30	3.1
44	APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa...	30	3.1
45	ENV_FLVGL (P08359) Env polyprotein precursor [Contains: Coat pro...	30	3.1
46	GPR37_MOUSE (Q9QY42) Probable G-protein coupled receptor 37 prec...	30	3.1
47	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	30	4.0
48	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	30	4.0
49	CJ095_HUMAN (Q9H7T3) Protein C10orf95	30	4.0
50	BSN_MOUSE (O88737) Bassoon protein	30	4.0
51	DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain)...	29	5.2
52	TESK1_MOUSE (O70146) Dual specificity testis-specific protein ki...	29	5.2
53	TBC12_HUMAN (O60347) TBC1 domain family member 12	29	5.2
54	RV167_YEAST (P39743) Reduced viability upon starvation protein 167	29	5.2
55	RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (N...	29	5.2
56	MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-pro...	29	6.8
57	FOXD1_MOUSE (Q61345) Forkhead box protein D1 (Forkhead-related p...	29	6.8
58	KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-ass...	29	6.8
59	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	29	6.8
60	ENV_FSVSM (P21445) Env polyprotein precursor [Contains: Coat pro...	29	6.8
61	ADA2B_AMBHO (O18935) Alpha-2B adrenergic receptor (Alpha-2B adre...	29	6.8
62	SLIT3_HUMAN (O75094) Slit homolog 3 protein precursor (Slit-3) (...	29	6.8
63	KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-as...	29	6.8
64	TEGU_EHV1B (P28955) Large tegument protein	29	6.8
65	WHW1_WHEAT (O64392) Wheatwin1 precursor (Pathogenesis-related pr...	28	8.9
66	PAK6_HUMAN (Q9NQU5) Serine/threonine-protein kinase PAK 6 (EC 2....	28	8.9
67	KR74_ICHV1 (Q00095) Gene 74 protein kinase (EC 2.7.11.1)	28	8.9
68	RBL_NITST (Q8VQ84) Ribulose bisphosphate carboxylase large chain...	28	8.9
69	ELN_RAT (Q99372) Elastin precursor (Tropoelastin)	28	8.9
70	RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/in...	28	8.9
71	IBP3_BOVIN (P20959) Insulin-like growth factor-binding protein 3...	28	8.9
72	ADRB1_PIG (Q28998) Beta-1 adrenergic receptor (Beta-1 adrenocept...	28	8.9

>VIAAT_RAT (O35458) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (rGVAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
 Frame = +1

Query: 154 PHDSSGELPGFEQPLLHAHGGLQAGKDPAAAHDHEAQCSPDAGG-----ATSLRTCFNGL 318
           P    G  P  E  + +  GG  A   P+ + D       + GG      T+    +N  
Sbjct: 69  PCGDEGAEPPVEGDIHYQRGG--APLPPSGSKDQAVGAGGEFGGHDKPKITAWEAGWNVT 126

Query: 319 NALSGVGLLSIPYALAEGGWXXXXXXXXXAMVCCYTGQLLQTCM 450
           NA+ G+ +L +PYA+  GG+         A+VCCYTG++L  C+
Sbjct: 127 NAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACL 170

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>VIAAT_MOUSE (O35633) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (mVIAAT) (mVGAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
 Frame = +1

Query: 160 DSSGELPGFEQPLLHAHGGLQAGKDPAAAHDHEAQCSPDAGG-----ATSLRTCFNGLNA 324
           D   E P  E  + +  GG  A   P+ + D       + GG      T+    +N  NA
Sbjct: 72  DEGAEAP-VEGDIHYQRGG--APLPPSGSKDQAVGAGGEFGGHDKPKITAWEAGWNVTNA 128

Query: 325 LSGVGLLSIPYALAEGGWXXXXXXXXXAMVCCYTGQLLQTCM 450
           + G+ +L +PYA+  GG+         A+VCCYTG++L  C+
Sbjct: 129 IQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACL 170

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>VIAAT_MACFA (Q95KE2) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (Solute carrier family 32 member 1)
          Length = 525

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
 Frame = +1

Query: 181 GFEQPL---LHAHGGLQAGKDPAAAHDHEAQCSPDAGG-----ATSLRTCFNGLNALSGV 336
           G E P+   +H   G  A   P+ + D +     + GG      T+    +N  NA+ G+
Sbjct: 74  GAEPPVEGDIHYQRGSGAPLPPSGSKD-QVGAGGEFGGHDKPKITAWEAGWNVTNAIQGM 132

Query: 337 GLLSIPYALAEGGWXXXXXXXXXAMVCCYTGQLLQTCM 450
            +L +PYA+  GG+         A+VCCYTG++L  C+
Sbjct: 133 FVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACL 170

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>VIAAT_HUMAN (Q9H598) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (hVIAAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
 Frame = +1

Query: 181 GFEQPL---LHAHGGLQAGKDPAAAHDHEAQCSPDAGG-----ATSLRTCFNGLNALSGV 336
           G E P+   +H   G  A   P+ + D +     + GG      T+    +N  NA+ G+
Sbjct: 74  GAEAPVEGDIHYQRGSGAPLPPSGSKD-QVGGGGEFGGHDKPKITAWEAGWNVTNAIQGM 132

Query: 337 GLLSIPYALAEGGWXXXXXXXXXAMVCCYTGQLLQTCM 450
            +L +PYA+  GG+         A+VCCYTG++L  C+
Sbjct: 133 FVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACL 170

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>LTBP2_RAT (O35806) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1764

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = -2

Query: 419 QQTMATRRSSTRLSHPPSA-SAYGMDSSPTPER--ALRPLKHVRRDVAPPASGEHCASWS 249
           Q  + TRRS+ R   PP+A +A+ +    TP+R  A R  +   R+V     G+ C  W+
Sbjct: 116 QSPVQTRRSNPRGQQPPAARTAHSVVRLATPQRPAAARRGRLTGRNVC---GGQCCPGWT 172

Query: 248 CAAAGS---LPACRPPCAWRSGCSKP 180
            + + +    P C+PPC  R  CS+P
Sbjct: 173 TSNSTNHCIKPVCQPPCQNRGSCSRP 198

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>AVT1_YEAST (P47082) Vacuolar amino acid transporter 1|
          Length = 602

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 277 AGGATSLRTCFNGLNALSGVGLLSIPYALAEGGW-XXXXXXXXXAMVCCYTGQLLQTCMG 453
           AG +T+ +T FN +N L G+GLL++P  L   GW          A+    T +LL  C+ 
Sbjct: 205 AGQSTAPQTIFNSINVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRCLD 264

Query: 454 ASP 462
             P
Sbjct: 265 TDP 267

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>UNC47_CAEEL (P34579) Vesicular GABA transporter (Uncoordinated protein 47)|
           (Protein unc-47)
          Length = 486

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +1

Query: 289 TSLRTCFNGLNALSGVGLLSIPYALAEGGWXXXXXXXXXAMVCCYTGQLLQTCM 450
           ++L+  +N  NA+ G+ ++ +P A+  GGW         A VC +TG LL  C+
Sbjct: 90  SALQAAWNVTNAIQGMFIVGLPIAVKVGGWWSIGAMVGVAYVCYWTGVLLIECL 143

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>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1821

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
 Frame = -2

Query: 452 PMHVCRSWPV*QQTMATRRSST----RLSHPPSASAYGMDSSPTPERALRPLKHVRRDVA 285
           P    RS P+ QQ  A R  +     RL  P  + A    + PTP R     ++V     
Sbjct: 118 PAQTRRSTPLGQQQPAPRTRAAPALPRLGTPQRSGA----APPTPPRGRLTGRNV----- 168

Query: 284 PPASGEHCASWSCAAAGS---LPACRPPCAWRSGCSKP 180
               G+ C  W+ A + +    P C PPC  R  CS+P
Sbjct: 169 --CGGQCCPGWTTANSTNHCIKPVCEPPCQNRGSCSRP 204

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>MMP9_RAT (P50282) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB)
          Length = 708

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 23/75 (30%), Positives = 31/75 (41%)
 Frame = -2

Query: 359 AYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPCAWRSGCSKP 180
           A G+D S  PE  + P+ H   D +P    +          GS P  RPP    +     
Sbjct: 407 ALGLDHSSVPEALMYPMYHYHED-SPLHEDDIKGIHHLYGRGSKPDPRPPAT--TAAEPQ 463

Query: 179 GSSPDESCGAAPPMA 135
            ++P   C  APPMA
Sbjct: 464 PTAPPTMCSTAPPMA 478

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>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1813

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
 Frame = -2

Query: 389 TRLSHPPSASAYGMDSSP------TPER--ALRPLKHVRRDVAPPASGEHCASWSCAAAG 234
           TR SHP         ++P      TP+R  A R  +   R+V     G+ C  W+ + + 
Sbjct: 121 TRRSHPRGQQQIAARAAPSVARLETPQRPAAARRGRLTGRNVC---GGQCCPGWTTSNST 177

Query: 233 S---LPACRPPCAWRSGCSKP 180
           +    P C+PPC  R  CS+P
Sbjct: 178 NHCIKPVCQPPCQNRGSCSRP 198

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>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1842

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = -2

Query: 416 QTMATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVR-RDVAPPASGEHCASWSCAA 240
           QT  +R S  + S P + +A  +    T +R       +  R+V     G+ C  W+ A 
Sbjct: 119 QTWRSRPSGQQQSAPRARAAPALPRLETVQRPRAARGRLTGRNVC---GGQCCPGWTTAN 175

Query: 239 AGS---LPACRPPCAWRSGCSKP 180
           + +    P C+PPC  R  CS+P
Sbjct: 176 STNHCIKPVCQPPCQNRGSCSRP 198

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>SALL3_HUMAN (Q9BXA9) Sal-like protein 3 (Zinc finger protein SALL3) (hSALL3)|
          Length = 1300

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 39/118 (33%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
 Frame = -2

Query: 416 QTMATRRSSTRLSHPPSA--SAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCA 243
           Q    +R   R S  P+A  SA G   S  P  A  PL       A   SG    +   A
Sbjct: 229 QVALMQRPPPRPSLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPA---A 285

Query: 242 AAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEPRSGRCS 69
             G+ P  RP     SG S PG   + S  AAP  A       AAP P   P+S   S
Sbjct: 286 FEGAQPLSRP----ESGASTPGGPAEPSAPAAPSAAPAP----AAPAPAPAPQSAASS 335

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>CHST2_MOUSE (Q80WV3) Carbohydrate sulfotransferase 2 (EC 2.8.2.-)|
           (N-acetylglucosamine 6-O-sulfotransferase 1)
           (GlcNAc6ST-1) (Gn6st-1)
           (Galactose/N-acetylglucosamine/N-acetylglucosamine
           6-O-sulfotransferase 2) (GST-2)
          Length = 530

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 11/57 (19%)
 Frame = +3

Query: 309 QWPQRPLRR-------GAAVHPVRAGGGRVAQPGAAPPRRHGLL----LHRPAPADV 446
           +W + PL++       GAAV    AG GR   P AAPPR H  +     +RP  A V
Sbjct: 77  KWHKEPLQQCNPDGPLGAAVGAAGAGWGRPGSPPAAPPRAHSRMDPRTPYRPPAAGV 133

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>GP137_MOUSE (Q60865) GPI-anchored protein p137 (p137GPI)|
          Length = 656

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -2

Query: 242 AAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAP-PPKSEPRS 81
           A+ SLPA   P  +++G SKP  S   +  AAP  ++ + +   AP PP +EP +
Sbjct: 427 ASSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPANEPET 481

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>BHLH3_MOUSE (Q99PV5) Class B basic helix-loop-helix protein 3 (bHLHB3)|
           (Differentially expressed in chondrocytes protein 2)
           (mDEC2)
          Length = 410

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
 Frame = +1

Query: 4   ATCSCALLCASVPSIAFACVPQLQRPERG----------SDFGGGAA*R**DKMAIGGAA 153
           A CS     AS P     CVP +QR + G          S +GG A      + A+    
Sbjct: 187 APCSAGAAAASGPERVARCVPVIQRTQPGTEPEHDTDTDSGYGGEAE---QGRAAVKQEP 243

Query: 154 PHDSSGELPGFEQPLLHAHGGLQAGKDPA 240
           P DSS   P  ++P L A G L  G +PA
Sbjct: 244 PGDSS---PAPKRPKLEARGAL-LGPEPA 268

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>ENV_FLVCS (Q02077) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E] (Fragment)
          Length = 436

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 263 CASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESC-GAAPPMAI 132
           CA+W C   G     +P  +W     K GSSPD SC G   P+ +
Sbjct: 117 CAAWGCETTGEA-WWKPTSSWDYITVKRGSSPDNSCEGKCNPLVL 160

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>GP137_HUMAN (Q14444) GPI-anchored protein p137 (p137GPI) (Membrane component|
           chromosome 11 surface marker 1)
          Length = 649

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -2

Query: 242 AAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAP-PPKSEPRS 81
           A+ SLPA   P  +++G SKP  S   +  AAP  ++ + +   AP PP +EP +
Sbjct: 427 ASSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPET 481

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>NFYC_HUMAN (Q13952) Nuclear transcription factor Y subunit gamma (Nuclear|
           transcription factor Y subunit C) (NF-YC) (CAAT-box
           DNA-binding protein subunit C) (Transactivator HSM-1/2)
          Length = 458

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 14  PVLCSVPLFHPSRSRACPSCSGRSEARTSEEAPPRGSRIRWPLAE 148
           P   S+P  HP   RA  SC   S+ + S  +PP    ++W + E
Sbjct: 344 PCTSSLPTTHPPSHRAGASCVCCSQPQQSSTSPPPSDALQWVVVE 388

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>AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene AF4)|
          Length = 1217

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 1/137 (0%)
 Frame = -2

Query: 464  SGDAPMHVCRSWPV*QQTMATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVA 285
            S D+   V +   V Q+     R +  +S   ++S+     S   +      ++ R+++ 
Sbjct: 808  SCDSSSRVTKKRRVTQKKSTVTRDTNWISRKTASSSSSHTESSRTKAPRSSSENSRKEML 867

Query: 284  PPASGEHCASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDE-SCGAAPPMAILSYYL*AA 108
            PPAS    +S S +   S PA + P             PDE +C   PP +  S    + 
Sbjct: 868  PPASASSVSSSSSSQKPSRPAQKRP------------RPDEDTCSQEPPRSASSTKSSST 915

Query: 107  PPPKSEPRSGRCSWGTH 57
             PP  + R  +     H
Sbjct: 916  DPPAPKHRKVQARGSEH 932

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>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 27/98 (27%), Positives = 36/98 (36%)
 Frame = -2

Query: 380  SHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPCAW 201
            SHP +        SP P+    P         PP +   C   S   AG   + +PPC+ 
Sbjct: 1011 SHPTTGLHQVPSQSPFPQHPFVP------GGPPPITPPSCPPTSTPPAGPSSSSQPPCS- 1063

Query: 200  RSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEP 87
             +  S  GS P       P + I    L  A  P+S P
Sbjct: 1064 -AAVSSGGSVPGAPSCPLPAVQIKEEALDEAEEPESPP 1100

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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
 Frame = -2

Query: 404 TRRSSTRLSHPPSASAYGMDS---------SPTPERALRPLKHVRRDVAPPASGEHCASW 252
           T RSST + HPP  S     S         SP+P     P+ H R+    PAS     S 
Sbjct: 144 TPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPHPRK--RSPASPSPSPSL 201

Query: 251 SCAAAGS-LPACRPPCAWRSGCSKPGSSP-DESCGAAP 144
           S + + S  P+  P  +       P SSP DES   AP
Sbjct: 202 SKSPSPSESPSLAPSPSDSVASLAPSSSPSDESPSPAP 239

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>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-related protein)
          Length = 1559

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
 Frame = -2

Query: 380  SHPPSASAYGMDS-SPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPCA 204
            SHP +   + + S SP P+    P         PP +   C   S   AG   + +PPC+
Sbjct: 1010 SHPTTGGLHQVPSQSPFPQHPFVP------GGPPPITPPSCPPTSTPPAGPSSSSQPPCS 1063

Query: 203  WRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEP 87
              +  S  G+ P       P + I    L  A  P+S P
Sbjct: 1064 --AAVSSGGNVPGAPSCPLPAVQIKEEALDEAEEPESPP 1100

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>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21|
          Length = 348

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 23/82 (28%), Positives = 32/82 (39%)
 Frame = -2

Query: 398 RSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPAC 219
           RS + LSH  S+ +     S +  R+  PL H R   +   S     S   ++    PA 
Sbjct: 266 RSRSPLSHSRSSRSRSRSRSRSRSRSRSPLSHSRSSRSRSPSRSRSPSRCASSRSRSPAH 325

Query: 218 RPPCAWRSGCSKPGSSPDESCG 153
           RP     S  + PG  P    G
Sbjct: 326 RPRRHSSSRVNPPGPPPRRPAG 347

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>RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
           (Foocen) (Glut4 vesicle 20 kDa protein)
          Length = 1163

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 30/105 (28%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
 Frame = -2

Query: 374 PPSASA----YGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPC 207
           PP+A+A    +  DS P   R   P        APPA+ E   SW  + A   P+  P  
Sbjct: 71  PPAAAAPLLDFSSDSVPPAPRGPLP-------AAPPAAPERQPSWERSPAAPAPSLPPAA 123

Query: 206 AWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPP--PKSEPRSG 78
           A           P       PP         AAPP  P +  R G
Sbjct: 124 AVLPSKLPEDDEPPARPPPPPPAGASPLAEPAAPPSTPAAPKRRG 168

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>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)|
          Length = 867

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 38/131 (29%), Positives = 45/131 (34%), Gaps = 5/131 (3%)
 Frame = -2

Query: 452  PMHVCRSWPV*QQTMATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPAS 273
            P  V  SW   Q   A RRS T              SSPTP+R    +   R     PA 
Sbjct: 755  PPPVDDSWLQVQSVPAGRRSPT--------------SSPTPQRRAPAVPPARPGSRGPAP 800

Query: 272  GEHCASWSCAAAGSLPACRPPCAWRSGCS-----KPGSSPDESCGAAPPMAILSYYL*AA 108
            G          AGS     PP   R G S      P   P     A P +  L  +   +
Sbjct: 801  GP-------PPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNRAPPGVPSLGAWRLNS 853

Query: 107  PPPKSEPRSGR 75
            P  K E R+G+
Sbjct: 854  PQGKHENRAGK 864

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>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 39/128 (30%), Positives = 47/128 (36%)
 Frame = -2

Query: 452  PMHVCRSWPV*QQTMATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPAS 273
            P  V  SW   Q   A RRS T              SSPTP+R    +   R     PA 
Sbjct: 755  PPPVDDSWLQVQSVPAGRRSPT--------------SSPTPQRRAPAVPPARPGSRGPAP 800

Query: 272  GEHCASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKS 93
            G   A  +   A  +P            S+PG+SPD      PP  + S    A  PP  
Sbjct: 801  GPPPAGSALGGAPPVP------------SRPGASPDP---FGPPPQVPSRPNRA--PPGV 843

Query: 92   EPRSGRCS 69
              RSG+ S
Sbjct: 844  PSRSGQAS 851

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>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B|
          Length = 648

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 10/62 (16%)
 Frame = -2

Query: 296 RDVAPPASG---EHCASWSCAAAGSLPACRPPCAWRSGCSKPGS-------SPDESCGAA 147
           R V  P SG   E   SWS A   S P    PC +R  CS  G+       SP  SCG  
Sbjct: 579 RGVEHPLSGVQGETLTSWSLATDPSYPCLAGPCTFRI-CSWMGTGLCPGPLSPRMSCGGG 637

Query: 146 PP 141
            P
Sbjct: 638 RP 639

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>SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)|
          Length = 705

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
 Frame = -2

Query: 341 SPTPERALRPLKHVRR---DVAPPASGEHCASWSCAAA-GSLPACRPPCAWRSGCSKPGS 174
           SP P+R   P    ++     APP  G+   S   A   G+ PA RPP           +
Sbjct: 502 SPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPP-----------A 550

Query: 173 SPDESCGAAPPMAILSYYL*AAPPPKS 93
           SP     A PP A     +    PPK+
Sbjct: 551 SPSPQRQAGPPQATRQTSVSGPAPPKA 577

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>TMCC2_MOUSE (Q80W04) Transmembrane and coiled-coil domains protein 2|
          Length = 706

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 327 LRRGAAVHPVRAGGGRVAQPGAAPPRRHGLLLHRPAPAD 443
           ++RGA++H     GGR A+  +  P+R    L R AP D
Sbjct: 161 IKRGASLHSSGGSGGRRAKSSSLEPQRGSPHLLRKAPQD 199

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>ELN_MOUSE (P54320) Elastin precursor (Tropoelastin)|
          Length = 860

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 29/97 (29%), Positives = 39/97 (40%)
 Frame = +1

Query: 85  RGSDFGGGAA*R**DKMAIGGAAPHDSSGELPGFEQPLLHAHGGLQAGKDPAAAHDHEAQ 264
           + + +G G A       A+GG  P    G LPG   P +   GG+     PAAA    A 
Sbjct: 481 KAAKYGAGGA------GALGGLVPGAVPGALPG-AVPAVPGAGGVPGAGTPAAA---AAA 530

Query: 265 CSPDAGGATSLRTCFNGLNALSGVGLLSIPYALAEGG 375
            +  A     L     G+    GVG+  IP  +  GG
Sbjct: 531 AAAKAAAKAGLGPGVGGVP--GGVGVGGIPGGVGVGG 565

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>SCEL_MOUSE (Q9EQG3) Sciellin|
          Length = 652

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 371 PSASAYGMDSSPTPER-ALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPP 210
           P+ S++  +++ T    A  P+K  R+   PP    H AS S AA+   PA  PP
Sbjct: 110 PAVSSFNANTTATASTPATTPVKKKRQSWFPPPPPGHNASPSTAASRRDPALHPP 164

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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/76 (30%), Positives = 35/76 (46%)
 Frame = -2

Query: 380 SHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPCAW 201
           S P  A + G   +P P+ A RP        APPA+    ++ + A +G  P    P A 
Sbjct: 115 SAPAPAPSQGPRPTPGPKPAPRPAPAAPEFTAPPAAPAAPSTPAPAPSGPKPGGARPGAP 174

Query: 200 RSGCSKPGSSPDESCG 153
           + G ++P S P +  G
Sbjct: 175 KPGGARP-SGPGQDRG 189

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>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
           (Verprolin homology domain-containing protein 2)
          Length = 498

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 32/115 (27%), Positives = 38/115 (33%), Gaps = 7/115 (6%)
 Frame = -2

Query: 401 RRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPA 222
           R S    SHPP A   G    P P  A  P         PP  G             +P 
Sbjct: 291 RSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPP---PPPPPMIG-------------IPP 334

Query: 221 CRPPCAWRSGCSKPGSSP-------DESCGAAPPMAILSYYL*AAPPPKSEPRSG 78
             PP  + S  + P  SP       D +    PP    + Y    PPP S+P  G
Sbjct: 335 PPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGG 389

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>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated|
           protein 10.11) (High sulfur keratin-associated protein
           10.11) (Keratin-associated protein 18-11)
           (Keratin-associated protein 18.11)
          Length = 298

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = -2

Query: 263 CASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYY 120
           CAS SC  A  +P C  P    S CS+  SS  +     P     S Y
Sbjct: 137 CASSSCQPACCVPVCCKPVCCVSTCSEDSSSCCQQSSCQPACCTSSSY 184

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>TRME_PSEAE (Q9HT07) Probable tRNA modification GTPase trmE|
          Length = 455

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -1

Query: 459 RRAHARLQELAGVAADHGDEEEQHQAEPPALRQRVRDGQQPHAGE 325
           RR H     LAG A +HG  +  H      L + +R  QQ H GE
Sbjct: 390 RRRHLEALRLAGQALEHGHSQLIHNGAGELLAEDLRQAQQ-HLGE 433

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>CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)|
          Length = 1655

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = -2

Query: 233 SLPACRPPCAWR--SGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEPRSGRCSWGT 60
           +LP   PP A R       PGS+PD    AAPP +       AAPP  + P       G+
Sbjct: 361 ALPTLPPPSASRIEENGPSPGSTPDAPGSAAPPGS-------AAPPGSAAPPGSAAPPGS 413

Query: 59  HA 54
            A
Sbjct: 414 AA 415

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>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = -2

Query: 281 PASGEHCASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPP 102
           P  G +  S + +  G+ P  RPP +  +G  +PG  P    G  PP    S    A  P
Sbjct: 156 PRPGNNPFSSTASGMGTRPTPRPPASGGTGAPRPGPRPHP--GMMPPRPGAS----AGGP 209

Query: 101 PKSE---PRSGRCSWGTHANAMDGTEA 30
           P+ +   P++ R   GT A    G+ A
Sbjct: 210 PRPQAPRPQAPRPGPGT-AGGRPGSSA 235

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 38/128 (29%), Positives = 48/128 (37%)
 Frame = -2

Query: 401 RRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPA 222
           RR S R   PP          P P R  R    VRR     AS    +S S ++    P 
Sbjct: 315 RRPSPRRRTPPRRM-------PPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPP 367

Query: 221 CRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEPRSGRCSWGTHANAMD 42
            +PP   R+  S P  +   S  A+PP         A+PPPK   RS        A    
Sbjct: 368 KKPP--KRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPR-RSPTPQQSNRARKSR 424

Query: 41  GTEAQSRA 18
           G+ +  RA
Sbjct: 425 GSVSPGRA 432

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>SUDX_DROME (Q9Y0H4) E3 ubiquitin-protein ligase suppressor of deltex (EC|
           6.3.2.-)
          Length = 949

 Score = 26.2 bits (56), Expect(2) = 2.4
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 136 AIGGAAPHDSSGELPGFEQPLLHAHGGLQAGKDPAAAHDHEAQCSPDAGGA 288
           A+   AP+      P   +PL   +G L     PAA +       P  GGA
Sbjct: 282 AVPQTAPYPQQPPAPALARPLTQVYGALPENTQPAAVY------LPAGGGA 326



 Score = 22.7 bits (47), Expect(2) = 2.4
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 324 PLRRGAAVHPVRAGGGRVAQPGAAPP 401
           P   GAAV P    G  + QPG   P
Sbjct: 321 PAGGGAAVGPPGVAGPPIEQPGVGLP 346

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>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)|
          Length = 1233

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 37/153 (24%), Positives = 49/153 (32%), Gaps = 28/153 (18%)
 Frame = -2

Query: 407  ATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSL 228
            AT RSS  +  PP       + + + E     L   RR     + G        A  GS 
Sbjct: 908  ATSRSSPSVRCPPQLHPAPREETGSEEYMNMDLGPGRRATWQESGGVELGRIGPAPPGSA 967

Query: 227  PACRPP----------CAWRSGCSK----------PGSSPDESCGAAPPMAILSYYL*AA 108
              CRP              + GC +          P S  D   G A   A L     AA
Sbjct: 968  TVCRPTRSVPNSRGDYMTMQIGCPRQSYVDTSPVAPVSYADMRTGIAAEKASLPRPTGAA 1027

Query: 107  PPPKS--------EPRSGRCSWGTHANAMDGTE 33
            PPP S         P+       TH++ + G +
Sbjct: 1028 PPPSSTASSSASVTPQGATAEQATHSSLLGGPQ 1060

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>ZAN_PIG (Q28983) Zonadhesin precursor|
          Length = 2476

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 314  PLKHVRRDVAPPASGEHCASWSCAAAG-SLPACRPPCAWRSGCSKPGSS 171
            P     R VAP +S   C    CA  G +L  CR   A+ S C++ G +
Sbjct: 1395 PFSQCHRVVAPQSSFSSCLYGQCATKGDTLTLCRSLQAYASLCARAGQA 1443

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>ENV_FLVCA (Q02076) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E] (Fragment)
          Length = 410

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 263 CASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESC-GAAPPMAI 132
           CA+W C   G     +P  +W     K GSS D SC G   P+ +
Sbjct: 107 CAAWGCETTGEA-WWKPTSSWDYITVKRGSSQDNSCEGKCNPLVL 150

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>DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)|
           dopamine receptor)
          Length = 467

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 34/100 (34%), Positives = 37/100 (37%), Gaps = 7/100 (7%)
 Frame = -2

Query: 419 QQTMATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASG---EHCASWS 249
           Q+    RR+      P   S  G   SPTP     P      D APPA G     C    
Sbjct: 220 QRWEVARRAKLHGRAPRRPSGPG-PPSPTPPAPRLPQDPCGPDCAPPAPGLPRGPCGPDC 278

Query: 248 CAAAGSLP--ACRPPCAWRSGCSKPGSSPDESCG--AAPP 141
             AA  LP   C P CA       PG  P + CG   APP
Sbjct: 279 APAAPGLPPDPCGPDCA----PPAPG-LPQDPCGPDCAPP 313

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>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor|
           (45/47 kDa antigen) (Fibronectin attachment protein)
           (FAP-A)
          Length = 381

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 10/129 (7%)
 Frame = -2

Query: 431 WPV*QQTMATRRSSTRLSHPPSASAYGMDSSPTP-ERALRPLKHVRRDVAPPASGEHCAS 255
           W     T  +  S+  ++ P ++ A     +P P   A  P    RR    PA      +
Sbjct: 15  WTTLAITTVSGASAVVIALPETSHADPEVPTPVPPSTATTPHPRRRRIPGQPADNAQAGA 74

Query: 254 WSCAAAGS---------LPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPP 102
            + A  G          +P   PP A   G    G+ P    GA PP    +    A PP
Sbjct: 75  PAPAPNGQQRPPRRRRMIPTRAPPPA---GAPPNGAPPAAPNGAPPPPVDPN----APPP 127

Query: 101 PKSEPRSGR 75
           P ++P +GR
Sbjct: 128 PPADPNAGR 136

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>ENV_FLVGL (P08359) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E]
          Length = 642

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 263 CASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESC-GAAPPMAI 132
           CA+W C   G     +P  +W     K GSS D SC G   P+ +
Sbjct: 147 CAAWGCETTGEA-WWKPTSSWDYITVKRGSSQDNSCEGKCNPLVL 190

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>GPR37_MOUSE (Q9QY42) Probable G-protein coupled receptor 37 precursor|
          Length = 600

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 293 DVAPPASGEHCASWSCAAAGSL-PACRPPCAWR 198
           D+ PP  G+       AAAG L P  +PP AWR
Sbjct: 86  DLPPPRGGDTGVIEEAAAAGPLGPPTKPPSAWR 118

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 33/115 (28%), Positives = 44/115 (38%)
 Frame = -2

Query: 437 RSWPV*QQTMATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCA 258
           RS+   ++    RR S R   PP          P P R  R    VRR     AS    +
Sbjct: 307 RSYSPRRRPSPRRRPSPRRRTPPRRM-------PPPPRHRRSRSPVRRRRRSSASLSGSS 359

Query: 257 SWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKS 93
           S S ++    P  +PP   +   S P  +   S  A+PP         A PPPK+
Sbjct: 360 SSSSSSRSRSPPKKPP---KRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKT 411

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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 33/115 (28%), Positives = 44/115 (38%)
 Frame = -2

Query: 437 RSWPV*QQTMATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCA 258
           RS+   ++    RR S R   PP          P P R  R    VRR     AS    +
Sbjct: 307 RSYSPRRRPSPRRRPSPRRRTPPRRM-------PPPPRHRRSRSPVRRRRRSSASLSGSS 359

Query: 257 SWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKS 93
           S S ++    P  +PP   +   S P  +   S  A+PP         A PPPK+
Sbjct: 360 SSSSSSRSRSPPKKPP---KRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKT 411

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>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = -2

Query: 281 PASGEHCASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPP 102
           P     CAS S AA+         C  R  CS P ++   +CGA P  A       AA P
Sbjct: 197 PTPAPTCASPSAAASSC-------CRRRRACSSPTTAWSGACGAGPTAAT------AAQP 243

Query: 101 --PKSEPRSGR 75
             P+S    GR
Sbjct: 244 GKPRSAAAPGR 254

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>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
 Frame = -2

Query: 215  PPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPP-----PKSEPRSGRCSWGTHAN 51
            PP + R+   KP S  D   GA  P    SY+  ++PP     P   P       G  A 
Sbjct: 1446 PPGSGRAPREKPLSGGDSEVGAPQPSRGYSYFTGSSPPLSPSTPSESPTFSPGKLGPRAT 1505

Query: 50   AMDGTEAQS 24
            A   T+  S
Sbjct: 1506 AEFSTQTPS 1514

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>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)|
          Length = 851

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 29/96 (30%), Positives = 35/96 (36%)
 Frame = -2

Query: 452 PMHVCRSWPV*QQTMATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPAS 273
           P  V  SW   Q   A RRS T              SSPTP+R    +   R     PA 
Sbjct: 755 PPPVDDSWLQVQSVPAGRRSPT--------------SSPTPQRRAPAVPPARPGSRGPAP 800

Query: 272 GEHCASWSCAAAGSLPACRPPCAWRSGCSKPGSSPD 165
           G   A  +   A  +P            S+PG+SPD
Sbjct: 801 GPPPAGSALGGAPPVP------------SRPGASPD 824

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>TESK1_MOUSE (O70146) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 627

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = -2

Query: 335 TPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPCAWRSGCSKPGSSPD-ES 159
           TP+  ++P   VRR  + P+S E       A  G  P+   P   R  C   GSSP+ E 
Sbjct: 423 TPDILVQPETPVRRCRSLPSSPELPRRMETALPGPGPSPMGPTEERMDCE--GSSPEPEP 480

Query: 158 CGAAP--PMAILSYYL*AAPPPKSEPRSGR 75
            G AP  P+A+ +    +     S+P S R
Sbjct: 481 PGLAPQLPLAVATDNFISTCSSASQPWSPR 510

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>TBC12_HUMAN (O60347) TBC1 domain family member 12|
          Length = 769

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 23/82 (28%), Positives = 28/82 (34%), Gaps = 20/82 (24%)
 Frame = -2

Query: 194 GCSKPGSSPDESCGAAPPMAILSYYL*AA--------------------PPPKSEPRSGR 75
           G  +P    DE     PP  +L  YL AA                    PPP + PRS  
Sbjct: 44  GAVEPPEEADEE-EETPPRQLLQRYLAAAGEQLEPGLCYCPLPAGQAGAPPPSAAPRSDA 102

Query: 74  CSWGTHANAMDGTEAQSRAQEH 9
           C  G+ +       A  RA  H
Sbjct: 103 CLLGSGSKHRGAEVADGRAPRH 124

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>RV167_YEAST (P39743) Reduced viability upon starvation protein 167|
          Length = 482

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 20/87 (22%), Positives = 33/87 (37%)
 Frame = -2

Query: 383 LSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPCA 204
           +S   S   YG    P    +  P  +     AP  + +  A +  AAA    A     A
Sbjct: 301 VSGASSGVGYGAGYDPATATSPTPTGYGYGAAAPSYAAQPAAQYGTAAAVGTAAAVGTAA 360

Query: 203 WRSGCSKPGSSPDESCGAAPPMAILSY 123
             +  + PG+ P  +   +PP+  L +
Sbjct: 361 GAAAGAVPGTYPQYAAAQSPPLTGLGF 387

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>RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
          Length = 1162

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
 Frame = -2

Query: 374 PPSASA---YGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPCA 204
           PP+A+    +  DS P   R   P        APP + E   SW  + A S P+  P  A
Sbjct: 70  PPAAAPLLDFSSDSVPPAPRGPLP-------AAPPTAPERQPSWERSPAASAPSLPPAAA 122

Query: 203 WRSG----CSKPGSSPDESCGAAP 144
                     +P + P    GA+P
Sbjct: 123 VLPSKLPEDDEPPARPPAPAGASP 146

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>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC|
            2.7.11.1)
          Length = 1309

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
 Frame = -2

Query: 371  PSASAYGMDSSPT-PERALRPLKHVRRDVAPPASGEHCAS-WSCAAAG-SLPACRPPCAW 201
            P +  + +  SPT P R+  P        +PP++    +S  S AAAG + P+     A 
Sbjct: 1107 PGSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAAAGHTRPSSLHGLAA 1166

Query: 200  RSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEPRSG 78
            + G  +P +   +S  + PP  +    + A PP    P  G
Sbjct: 1167 KLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSPSPLPG 1207

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>FOXD1_MOUSE (Q61345) Forkhead box protein D1 (Forkhead-related protein FKHL8)|
           (Forkhead-related transcription factor 4) (FREAC-4)
           (Brain factor-2) (HFH-BF-2)
          Length = 456

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/80 (25%), Positives = 32/80 (40%)
 Frame = -2

Query: 284 PPASGEHCASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAP 105
           PPA G    ++ CA    LP C PP A  +  +   ++        PP           P
Sbjct: 266 PPACGY--GAYGCAYGLQLPPCAPPSALFAAAAAAAAAAFHPHSPPPPPPP------PPP 317

Query: 104 PPKSEPRSGRCSWGTHANAM 45
           PP +     R ++G  ++A+
Sbjct: 318 PPGAAAELARTAFGYRSHAL 337

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>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein|
           5.8) (Ultrahigh sulfur keratin-associated protein 5.8)
           (Keratin, ultra high-sulfur matrix protein B) (UHS
           keratin B) (UHS KerB)
          Length = 187

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 263 CASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCGAA 147
           C S  C ++    +C  PC  +S C KP  S    CG++
Sbjct: 95  CCSSGCGSSCCQSSCCKPCCSQSSCCKP-CSCSSGCGSS 132

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>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 26/98 (26%), Positives = 35/98 (35%)
 Frame = -2

Query: 380  SHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPCAW 201
            SHPP+         P  +    P         PP +   C S S   AG   + +PPC+ 
Sbjct: 1019 SHPPTGLHQVAPQPPFAQHPFVP------GGPPPITPPTCPSTSTPPAGPGTSAQPPCS- 1071

Query: 200  RSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEP 87
                +  GS    S    P + I    L  A  P+S P
Sbjct: 1072 -GAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 1108

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>ENV_FSVSM (P21445) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E]
          Length = 645

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -2

Query: 263 CASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESC 156
           CA+W C   G     +P  +W     K GSS D SC
Sbjct: 150 CAAWGCETTGEA-WWKPTSSWDYITVKRGSSQDTSC 184

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>ADA2B_AMBHO (O18935) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 386

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 31/119 (26%), Positives = 43/119 (36%), Gaps = 8/119 (6%)
 Frame = -2

Query: 407 ATRRSSTRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSL 228
           ATR   ++L HP +A A      PT   +L           P  +GE   +       +L
Sbjct: 199 ATREGESKLPHPMAAGASASAKPPTLTSSLAVAGEANGHSKP--TGEEGETLEDPVTSTL 256

Query: 227 PACRPPCAWRSGCSKPG---SSP-----DESCGAAPPMAILSYYL*AAPPPKSEPRSGR 75
           P   P         K G   +SP     +E CG   P A+      A  PP  +P+  R
Sbjct: 257 PPSWPALPNSDQGQKEGVCETSPEEDDEEEECG---PQAVPVSPASAGSPPLQQPQGSR 312

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>SLIT3_HUMAN (O75094) Slit homolog 3 protein precursor (Slit-3) (Multiple|
           epidermal growth factor-like domains 5)
          Length = 1523

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +1

Query: 241 AAHDHEAQCSPDAGGATSLRTCFNGLNALSGVGLLSIPYALAEG 372
           A H     C+ ++    S  TC N +    G GL+ IP  L EG
Sbjct: 265 APHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLPEG 308

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>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated|
           protein 5.11) (Ultrahigh sulfur keratin-associated
           protein 5.11)
          Length = 156

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = -2

Query: 284 PPASGEHCASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESC 156
           P  S   C S+ C ++ S P C      +S C KP       C
Sbjct: 90  PCCSSSGCGSFCCQSSCSKPCCCQSSCCQSSCCKPCCCQSSCC 132

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>TEGU_EHV1B (P28955) Large tegument protein|
          Length = 3421

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
 Frame = -2

Query: 374  PPSASAYGMDSSPTPERALR-PLKHVRRDVAPPASGEHCASWSCAAAGSLPACRPPCAWR 198
            PPS S     +   P+ A+  P     +  A PA+    ++ + AAA +  A  P  A  
Sbjct: 2776 PPSDSNVTQSTKEPPKPAVETPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPA 2835

Query: 197  SGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEPRS 81
               + P ++P +S  AAP          AA P K + +S
Sbjct: 2836 KSAAAPAAAPAKSA-AAP----------AAAPAKDQTKS 2863

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>WHW1_WHEAT (O64392) Wheatwin1 precursor (Pathogenesis-related protein 4a)|
           (Protein 0.14)
          Length = 146

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -2

Query: 293 DVAPPASGEHCASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCG 153
           D+  PA   +CA+W    A    + R    W + C   G+    SCG
Sbjct: 42  DLGAPAVSAYCATWD---ASKPLSWRSKYGWTAFCGPAGAHGQASCG 85

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>PAK6_HUMAN (Q9NQU5) Serine/threonine-protein kinase PAK 6 (EC 2.7.11.1)|
           (p21-activated kinase 6) (PAK-6) (PAK-5)
          Length = 681

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 29/109 (26%), Positives = 41/109 (37%)
 Frame = -2

Query: 392 STRLSHPPSASAYGMDSSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACRP 213
           ST  + PPS+S  G      P  + RP    ++D  P            A A SLP+ +P
Sbjct: 267 STAATAPPSSSKPGPPPQSKPNSSFRP---PQKDNPPSL---------VAKAQSLPSDQP 314

Query: 212 PCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEPRSGRCSW 66
              +    +   SSP +S   AP    L        P +S P     +W
Sbjct: 315 VGTFSPLTTSDTSSPQKSLRTAPATGQL--------PGRSSPAGSPRTW 355

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>KR74_ICHV1 (Q00095) Gene 74 protein kinase (EC 2.7.11.1)|
          Length = 673

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
 Frame = -2

Query: 188 SKPGSSPDESCGAAPPMAILSYYL------*AAPPPKSEPR-SGRCSWGTHA 54
           S PG +P    GAAP + ++S  +         P P  +PR   R SWG +A
Sbjct: 411 SGPGPAPPPVIGAAPAVRVVSNAVEFRSRWGVRPSPAMDPRLEARTSWGKNA 462

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>RBL_NITST (Q8VQ84) Ribulose bisphosphate carboxylase large chain (EC|
           4.1.1.39) (RuBisCO large subunit)
          Length = 473

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 344 SSPTPERALRPLKHVRRDVAPPASGEHCASWSCAAAGSLPACR 216
           ++PTPE   +  +H +   AP    ++ A   CA AG    CR
Sbjct: 236 TAPTPEEMYKRAEHAKEIGAPIIMHDYLAGGLCANAGLANWCR 278

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>ELN_RAT (Q99372) Elastin precursor (Tropoelastin)|
          Length = 870

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 25/80 (31%), Positives = 33/80 (41%)
 Frame = +1

Query: 136 AIGGAAPHDSSGELPGFEQPLLHAHGGLQAGKDPAAAHDHEAQCSPDAGGATSLRTCFNG 315
           A+ GA P    G LPG   P +   GG+     PAAA    A  +    G   L     G
Sbjct: 512 AVPGALPGAVPGALPG-AVPGVPGTGGVPGAGTPAAAAAAAAAKAAAKAGQYGLGPGVGG 570

Query: 316 LNALSGVGLLSIPYALAEGG 375
           +    GVG+  +P  +  GG
Sbjct: 571 VP--GGVGVGGLPGGVGPGG 588

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>RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 980

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
 Frame = -2

Query: 344 SSPTPERALRPLKHVRRDVAPPASGE--HCASWSCAAAGSLPACRPPCA---WRSGCSKP 180
           + P P   L P  H+    AP A G   H       A  SLP  RP      +     KP
Sbjct: 301 AGPLPNSPLTPTSHL----APHAPGPPGHSNQPPMKACESLP--RPAVGLGPFGEEEMKP 354

Query: 179 GSSPDESCGAAPPMAILSYYL*AAPP 102
           G++P+    A PP   L   L AAPP
Sbjct: 355 GTTPNPLHQAPPPPLPLKKALPAAPP 380

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>IBP3_BOVIN (P20959) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 291

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/58 (34%), Positives = 25/58 (43%)
 Frame = -2

Query: 260 ASWSCAAAGSLPACRPPCAWRSGCSKPGSSPDESCGAAPPMAILSYYL*AAPPPKSEP 87
           A W+ AA  +L   R P A R+G    G+ P   C      A+       APPP S P
Sbjct: 7   ALWA-AALTALTLLRGPPAARAGAGTMGAGPVVRCEPCDARAVAQ----CAPPPPSPP 59

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>ADRB1_PIG (Q28998) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 468

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
 Frame = -2

Query: 260 ASWSCAAAGSLP-------ACRPPCAWRSGCSKPGSSPDESCGAAPPMAIL 129
           A  SCAAAG  P         RPP +   G +      +E  GAAPP  +L
Sbjct: 388 ARGSCAAAGDGPRASGCLAVARPPPS--PGAASDDDDDEEDVGAAPPAPLL 436


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,893,102
Number of Sequences: 219361
Number of extensions: 1275209
Number of successful extensions: 5926
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 5318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5887
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result