ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188795.2| Oryza sativa (japonica cultivar-group), mRNA 92 2e-15
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
3dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
4dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
5dbj|AK065831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
6ref|NM_186227.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.006
7dbj|AP004014.5| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
8dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
9dbj|AK068296.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
10gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.34
11gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.34
12ref|XM_385423.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 44 0.34
13gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.34
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
15gb|AE005107.1| Halobacterium sp. NRC-1 section 138 of 170 of the... 44 0.34
16gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 42 1.4
17ref|NM_190499.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
18gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.4
19gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
20gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 1.4
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.4
22emb|AL031296.1|HS888M10 Human DNA sequence from clone RP5-888M10... 42 1.4
23gb|AC161447.6| Mus musculus BAC clone RP24-333C14 from chromosom... 42 1.4
24gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polye... 42 1.4
25gb|AF449714.1|AF449714 Cercopithecine herpesvirus 2 unique short... 42 1.4
26dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
27dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
28dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.4
29dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
30dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-4 mRN... 42 1.4
31dbj|AK100108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
32dbj|AK099926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
33dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
34dbj|AK066848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
35dbj|AK062894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
36gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
37ref|XM_475043.1| Oryza sativa (japonica cultivar-group), predic... 40 5.4
38ref|XM_464749.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
39ref|NM_196097.1| Oryza sativa (japonica cultivar-group) putative... 40 5.4
40gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
41ref|XM_540490.2| PREDICTED: Canis familiaris similar to NAD-depe... 40 5.4
42emb|AL590553.8| Human DNA sequence from clone RP11-272G1 on chro... 40 5.4
43gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.4
44gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
45gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 geno... 40 5.4
46emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.4
47gb|AY953282.1| Streptomyces nodosus subsp. asukaensis putative r... 40 5.4
48emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
49emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster fo... 40 5.4
50gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.4
51gb|AF515832.1| Streptomyces griseus strain IFO13350 serine prote... 40 5.4
52gb|AE011814.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.4
53gb|AC113335.1| Genomic sequence for Oryza sativa (japonica culti... 40 5.4
54gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.4
55dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
56dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
57dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
58dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
59gb|AC144411.2| Homo sapiens BAC clone GS1-146C24 from 7, complet... 40 5.4
60gb|AC133961.3| Homo sapiens BAC clone RP13-494C23 from 4, comple... 40 5.4
61gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glyco... 40 5.4
62gb|AE004854.1| Pseudomonas aeruginosa PAO1, section 415 of 529 o... 40 5.4
63gb|AY188798.1| Oryza sativa (indica cultivar-group) sedoheptulos... 40 5.4
64gb|AY188797.1| Oryza sativa (indica cultivar-group) sedoheptulos... 40 5.4
65gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.4
66dbj|AK199717.1| Mus musculus cDNA, clone:Y1G0132C24, strand:minu... 40 5.4
67dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
68dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
69dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.4
70dbj|AK120685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
71dbj|AK120526.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
72dbj|AK119209.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
73dbj|AK111176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
74dbj|AK109849.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
75dbj|AK107169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
76dbj|AK103850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
77emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.4
78dbj|AK065773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
79dbj|AK062081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
80dbj|AK060973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
81gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.4
82gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
83emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomi... 40 5.4
84emb|AL805900.10| Mouse DNA sequence from clone RP23-85B14 on chr... 40 5.4
85gb|L29018.1|STMSEPR Streptomyces griseus (clone: pDS-C) serine p... 40 5.4
86dbj|AB000322.1| Fagopyrum callianthum DNA for 5.8S rRNA, ITS1 an... 40 5.4 
>ref|NM_188795.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1571

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                       
Query: 202 gaagtcggccacctccctcctcctcggcgccgcgctcgccaccgccttcttcctcctcta 261
           ||||||||||||||| ||||| |||||||| || |||||||| | ||||||||| |||||
Sbjct: 73  gaagtcggccacctcgctcctgctcggcgcggccctcgccacggtcttcttcctgctcta 132

                                     
Query: 262 cacgtccgtgggccgcgacctcggcg 287
           ||| |||||  |||||||||||||||
Sbjct: 133 cacctccgtctgccgcgacctcggcg 158
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                            
Query: 202      gaagtcggccacctccctcctcctcggcgccgcgctcgccaccgccttcttcctcctcta 261
                ||||||||||||||| ||||| |||||||| || |||||||| | ||||||||| |||||
Sbjct: 11529110 gaagtcggccacctcgctcctgctcggcgcggccctcgccacggtcttcttcctgctcta 11529169

                                          
Query: 262      cacgtccgtgggccgcgacctcggcg 287
                ||| |||||  |||||||||||||||
Sbjct: 11529170 cacctccgtctgccgcgacctcggcg 11529195



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                        
Query: 294     cgccgccggcgccacggtgggcgcc 318
               |||||||||||||||||||||||||
Sbjct: 1702077 cgccgccggcgccacggtgggcgcc 1702101



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                        
Query: 294     cgccgccggcgccacggtgggcgcc 318
               |||||||||||||||||||||||||
Sbjct: 1669497 cgccgccggcgccacggtgggcgcc 1669521
to top
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1120F06
          Length = 186712

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                         
Query: 202   gaagtcggccacctccctcctcctcggcgccgcgctcgccaccgccttcttcctcctcta 261
             ||||||||||||||| ||||| |||||||| || |||||||| | ||||||||| |||||
Sbjct: 92768 gaagtcggccacctcgctcctgctcggcgcggccctcgccacggtcttcttcctgctcta 92827

                                       
Query: 262   cacgtccgtgggccgcgacctcggcg 287
             ||| |||||  |||||||||||||||
Sbjct: 92828 cacctccgtctgccgcgacctcggcg 92853
to top
>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0446G09
          Length = 146898

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                          
Query: 202    gaagtcggccacctccctcctcctcggcgccgcgctcgccaccgccttcttcctcctcta 261
              ||||||||||||||| ||||| |||||||| || |||||||| | ||||||||| |||||
Sbjct: 138630 gaagtcggccacctcgctcctgctcggcgcggccctcgccacggtcttcttcctgctcta 138689

                                        
Query: 262    cacgtccgtgggccgcgacctcggcg 287
              ||| |||||  |||||||||||||||
Sbjct: 138690 cacctccgtctgccgcgacctcggcg 138715
to top
>dbj|AK065831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037A06, full
           insert sequence
          Length = 1571

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                       
Query: 202 gaagtcggccacctccctcctcctcggcgccgcgctcgccaccgccttcttcctcctcta 261
           ||||||||||||||| ||||| |||||||| || |||||||| | ||||||||| |||||
Sbjct: 73  gaagtcggccacctcgctcctgctcggcgcggccctcgccacggtcttcttcctgctcta 132

                                     
Query: 262 cacgtccgtgggccgcgacctcggcg 287
           ||| |||||  |||||||||||||||
Sbjct: 133 cacctccgtctgccgcgacctcggcg 158
to top
>ref|NM_186227.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1575

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 294 cgccgccggcgccacggtgggcgcc 318
           |||||||||||||||||||||||||
Sbjct: 372 cgccgccggcgccacggtgggcgcc 396
to top
>dbj|AP004014.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1606_D04
          Length = 92729

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 294   cgccgccggcgccacggtgggcgcc 318
             |||||||||||||||||||||||||
Sbjct: 44277 cgccgccggcgccacggtgggcgcc 44301



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 294   cgccgccggcgccacggtgggcgcc 318
             |||||||||||||||||||||||||
Sbjct: 11697 cgccgccggcgccacggtgggcgcc 11721
to top
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0088O14
          Length = 179483

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 294    cgccgccggcgccacggtgggcgcc 318
              |||||||||||||||||||||||||
Sbjct: 170732 cgccgccggcgccacggtgggcgcc 170756



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 294    cgccgccggcgccacggtgggcgcc 318
              |||||||||||||||||||||||||
Sbjct: 138152 cgccgccggcgccacggtgggcgcc 138176
to top
>dbj|AK068296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149H14, full
           insert sequence
          Length = 1919

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 294 cgccgccggcgccacggtgggcgcc 318
           |||||||||||||||||||||||||
Sbjct: 523 cgccgccggcgccacggtgggcgcc 547
to top
>gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1653_D06,
            complete sequence
          Length = 71193

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 238  cgccaccgccttcttcctcctc 259
            ||||||||||||||||||||||
Sbjct: 6204 cgccaccgccttcttcctcctc 6225
to top
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03,
              complete sequence
          Length = 185881

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 238    cgccaccgccttcttcctcctc 259
              ||||||||||||||||||||||
Sbjct: 173872 cgccaccgccttcttcctcctc 173893
to top
>ref|XM_385423.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05247.1)
           partial mRNA
          Length = 753

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 239 gccaccgccttcttcctcctct 260
           ||||||||||||||||||||||
Sbjct: 711 gccaccgccttcttcctcctct 690
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 286     cgcgaggacgccgccggcgcca 307
               ||||||||||||||||||||||
Sbjct: 4487335 cgcgaggacgccgccggcgcca 4487314
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 238      cgccaccgccttcttcctcctc 259
                ||||||||||||||||||||||
Sbjct: 10789272 cgccaccgccttcttcctcctc 10789293



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 225      tcggcgccgcgctcgccacc 244
                ||||||||||||||||||||
Sbjct: 18433487 tcggcgccgcgctcgccacc 18433468
to top
>gb|AE005107.1| Halobacterium sp. NRC-1 section 138 of 170 of the complete genome
          Length = 13368

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 225   tcggcgccgcgctcgccaccgc 246
             ||||||||||||||||||||||
Sbjct: 12681 tcggcgccgcgctcgccaccgc 12660
to top
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 217    cctcctcctcggcgccgcgctcgcc 241
              |||||||| ||||||||||||||||
Sbjct: 136385 cctcctccccggcgccgcgctcgcc 136409
to top
>ref|NM_190499.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1173

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 219 tcctcctcggcgccgcgctcgccaccgccttcttcctcctc 259
           ||||||||||||||  | ||||| || ||||||||||||||
Sbjct: 140 tcctcctcggcgccctgatcgcctcctccttcttcctcctc 180
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 222    tcctcggcgccgcgctcgccaccgc 246
              ||||||||||| |||||||||||||
Sbjct: 760862 tcctcggcgccacgctcgccaccgc 760838
to top
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map
              near C10769, complete sequence
          Length = 194856

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 214    ctccctcctcctcggcgccgc 234
              |||||||||||||||||||||
Sbjct: 118306 ctccctcctcctcggcgccgc 118286
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 292    gacgccgccggcgccacggtgggcgccgg 320
              ||||||| ||||||||||| |||||||||
Sbjct: 902884 gacgccggcggcgccacggcgggcgccgg 902912
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 214      ctccctcctcctcggcgccgc 234
                |||||||||||||||||||||
Sbjct: 29020985 ctccctcctcctcggcgccgc 29021005



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 284     ggcgcgaggacgccgccggc 303
               ||||||||||||||||||||
Sbjct: 2121959 ggcgcgaggacgccgccggc 2121940
to top
>emb|AL031296.1|HS888M10 Human DNA sequence from clone RP5-888M10 on chromosome 1p36.11-36.31
             Contains the 3' end of the VPS13D gene for vacuolar
             protein sorting 13D (yeast) and a novel gene, complete
             sequence
          Length = 124874

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 131   cccaccaccacccatcttcctggcc 155
             |||||| ||||||||||||||||||
Sbjct: 91843 cccacctccacccatcttcctggcc 91819
to top
>gb|AC161447.6| Mus musculus BAC clone RP24-333C14 from chromosome 17, complete sequence
          Length = 182569

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 365    gtcaaagaggtgagcaagggcgcgg 389
              |||||||||||||||||||| ||||
Sbjct: 127853 gtcaaagaggtgagcaagggggcgg 127829
to top
>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
            biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 223  cctcggcgccgcgctcgccaccgcc 247
            ||||||||||||||||| |||||||
Sbjct: 2470 cctcggcgccgcgctcggcaccgcc 2494
to top
>gb|AF449714.1|AF449714 Cercopithecine herpesvirus 2 unique short region, partial sequence
          Length = 9811

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 217  cctcctcctcggcgccgcgctcgcc 241
            |||||||| ||||||||||||||||
Sbjct: 3335 cctcctccccggcgccgcgctcgcc 3359
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 214      ctccctcctcctcggcgccgc 234
                |||||||||||||||||||||
Sbjct: 29112407 ctccctcctcctcggcgccgc 29112427



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 284     ggcgcgaggacgccgccggc 303
               ||||||||||||||||||||
Sbjct: 2121971 ggcgcgaggacgccgccggc 2121952
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 219      tcctcctcggcgccgcgctcgccaccgccttcttcctcctc 259
                ||||||||||||||  | ||||| || ||||||||||||||
Sbjct: 35890456 tcctcctcggcgccctgatcgcctcctccttcttcctcctc 35890496
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 225     tcggcgccgcgctcgccaccg 245
               |||||||||||||||||||||
Sbjct: 1690961 tcggcgccgcgctcgccaccg 1690981



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 243     ccgccttcttcctcctctac 262
               ||||||||||||||||||||
Sbjct: 6314335 ccgccttcttcctcctctac 6314354
to top
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506B12
          Length = 170759

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 219    tcctcctcggcgccgcgctcgccaccgccttcttcctcctc 259
              ||||||||||||||  | ||||| || ||||||||||||||
Sbjct: 154914 tcctcctcggcgccctgatcgcctcctccttcttcctcctc 154954
to top
>dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-4 mRNA for
           UDP-glucuronic acid decarboxylase, complete cds
          Length = 1404

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 219 tcctcctcggcgccgcgctcgccaccgccttcttcctcctc 259
           ||||||||||||||  | ||||| || ||||||||||||||
Sbjct: 140 tcctcctcggcgccctgatcgcctcctccttcttcctcctc 180
to top
>dbj|AK100108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004N24, full
           insert sequence
          Length = 1484

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 214 ctccctcctcctcggcgccgc 234
           |||||||||||||||||||||
Sbjct: 303 ctccctcctcctcggcgccgc 323
to top
>dbj|AK099926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116N22, full
           insert sequence
          Length = 1810

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 214 ctccctcctcctcggcgccgc 234
           |||||||||||||||||||||
Sbjct: 631 ctccctcctcctcggcgccgc 651
to top
>dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008F13, full
           insert sequence
          Length = 2387

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 219 tcctcctcggcgccgcgctcgccaccgccttcttcctcctc 259
           ||||||||||||||  | ||||| || ||||||||||||||
Sbjct: 173 tcctcctcggcgccctgatcgcctcctccttcttcctcctc 213
to top
>dbj|AK066848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079N02, full
            insert sequence
          Length = 3145

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 214  ctccctcctcctcggcgccgc 234
            |||||||||||||||||||||
Sbjct: 1210 ctccctcctcctcggcgccgc 1190
to top
>dbj|AK062894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-E07, full
           insert sequence
          Length = 974

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 219 tcctcctcggcgccgcgctcgccaccgccttcttcctcctc 259
           ||||||||||||||  | ||||| || ||||||||||||||
Sbjct: 183 tcctcctcggcgccctgatcgcctcctccttcttcctcctc 223
to top
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09,
              complete sequence
          Length = 167222

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    ggcgcgaggacgccgccggc 303
              ||||||||||||||||||||
Sbjct: 159382 ggcgcgaggacgccgccggc 159363
to top
>ref|XM_475043.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1179

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 296  ccgccggcgccacggtgggcgccg 319
            ||||||||||||| ||||||||||
Sbjct: 1148 ccgccggcgccaccgtgggcgccg 1171
to top
>ref|XM_464749.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2148

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 279 acctcggcgcgaggacgccgccgg 302
           |||||||||||| |||||||||||
Sbjct: 632 acctcggcgcgacgacgccgccgg 655
to top
>ref|NM_196097.1| Oryza sativa (japonica cultivar-group) putative PPR-repeat protein
           (OJ1003C07.14), mRNA
          Length = 2742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 cggccacctccctcctcctc 226
           ||||||||||||||||||||
Sbjct: 170 cggccacctccctcctcctc 189
to top
>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
             complete sequence
          Length = 156163

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   tcggcgccgcgctcgccacc 244
             ||||||||||||||||||||
Sbjct: 73324 tcggcgccgcgctcgccacc 73305
to top
>ref|XM_540490.2| PREDICTED: Canis familiaris similar to NAD-dependent deacetylase
           sirtuin-7 (SIR2-like protein 7) (LOC483371), mRNA
          Length = 1582

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 220 cctcctcggcgccgcgctc-gccaccgccttc 250
           |||||||||||| |||||| ||||||||||||
Sbjct: 163 cctcctcggcgctgcgctcggccaccgccttc 132
to top
>emb|AL590553.8| Human DNA sequence from clone RP11-272G1 on chromosome 6, complete
              sequence
          Length = 171882

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    ccgccttcttcctcctctac 262
              ||||||||||||||||||||
Sbjct: 105406 ccgccttcttcctcctctac 105425
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     cggcgccgcgctcgccaccg 245
               ||||||||||||||||||||
Sbjct: 3801380 cggcgccgcgctcgccaccg 3801361
to top
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030C11, complete sequence
          Length = 156647

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   ggcgcgaggacgccgccggc 303
             ||||||||||||||||||||
Sbjct: 12253 ggcgcgaggacgccgccggc 12234
to top
>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence,
            complete sequence
          Length = 106110

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  cggccacctccctcctcctc 226
            ||||||||||||||||||||
Sbjct: 7533 cggccacctccctcctcctc 7552
to top
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16
          Length = 348068

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    cggcgccgcgctcgccaccg 245
              ||||||||||||||||||||
Sbjct: 182016 cggcgccgcgctcgccaccg 181997
to top
>gb|AY953282.1| Streptomyces nodosus subsp. asukaensis putative redoxin, putative
           AT-rich DNA-binding protein, and glutamyl-tRNA reductase
           (gtr) genes, complete cds; and putative porphobilinogen
           deaminase (hemC) gene, partial cds
          Length = 3393

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cctcggcgccgcgctcgcca 242
           ||||||||||||||||||||
Sbjct: 944 cctcggcgccgcgctcgcca 963
to top
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 296    ccgccggcgccacggtgggcgccg 319
              ||||||||||||| ||||||||||
Sbjct: 118176 ccgccggcgccaccgtgggcgccg 118153
to top
>emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster for borrelidin biosynthesis
          Length = 74787

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  gcgccgcgctcgccaccgcc 247
            ||||||||||||||||||||
Sbjct: 1540 gcgccgcgctcgccaccgcc 1559
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 288     cgaggacgccgccggcgcca 307
               ||||||||||||||||||||
Sbjct: 5172644 cgaggacgccgccggcgcca 5172625
to top
>gb|AF515832.1| Streptomyces griseus strain IFO13350 serine protease (sprC) gene,
            complete cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  acgccgccggcgccacggtg 312
            ||||||||||||||||||||
Sbjct: 1857 acgccgccggcgccacggtg 1876
to top
>gb|AE011814.1| Xanthomonas axonopodis pv. citri str. 306,  section 192 of 469 of the
            complete genome
          Length = 16675

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  ggccgcgacctcggcgcgag 291
            ||||||||||||||||||||
Sbjct: 4790 ggccgcgacctcggcgcgag 4809
to top
>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1003C07, from chromosome 10, complete
             sequence
          Length = 115188

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   cggccacctccctcctcctc 226
             ||||||||||||||||||||
Sbjct: 98354 cggccacctccctcctcctc 98373
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 198     cgatgaagtcggccacctcc 217
               ||||||||||||||||||||
Sbjct: 1077056 cgatgaagtcggccacctcc 1077037
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 296     ccgccggcgccacggtgggcgccg 319
               ||||||||||||| ||||||||||
Sbjct: 9033442 ccgccggcgccaccgtgggcgccg 9033419
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 207      cggccacctccctcctcctc 226
                ||||||||||||||||||||
Sbjct: 11060703 cggccacctccctcctcctc 11060684
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     cggccacctccctcctcctc 226
               ||||||||||||||||||||
Sbjct: 4329877 cggccacctccctcctcctc 4329858
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 279     acctcggcgcgaggacgccgccgg 302
               |||||||||||| |||||||||||
Sbjct: 7097194 acctcggcgcgacgacgccgccgg 7097217
to top
>gb|AC144411.2| Homo sapiens BAC clone GS1-146C24 from 7, complete sequence
          Length = 178059

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    ctccattattcccacccctc 33
             ||||||||||||||||||||
Sbjct: 44003 ctccattattcccacccctc 43984
to top
>gb|AC133961.3| Homo sapiens BAC clone RP13-494C23 from 4, complete sequence
          Length = 177787

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   cttcctggcctgatcaccac 165
             ||||||||||||||||||||
Sbjct: 47273 cttcctggcctgatcaccac 47254
to top
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase,
             polyketide synthase type Is, acyl transferase, membrane
             protein, ABC transporter, sugar dehydratase/epimerase,
             sugar epimerase, sugar nucleotidyltransferase, sugar
             dehydratase/epimerase, thioesterase, acyl CoA ligase,
             amine oxidase, phosphopantetheinyl transferase,
             transcriptional regulator,
             carboxylase/carboxyltransferase, amidinohydrolase, amide
             synthetase, 5-aminolevulinate synthase, and acyl CoA
             ligase genes, complete cds; and unknown gene
          Length = 161719

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   gcgcgaggacgccgccggcg 304
             ||||||||||||||||||||
Sbjct: 39354 gcgcgaggacgccgccggcg 39335
to top
>gb|AE004854.1| Pseudomonas aeruginosa PAO1, section 415 of 529 of the complete
            genome
          Length = 11884

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  tcctcggcgccgcgctcgcc 241
            ||||||||||||||||||||
Sbjct: 9632 tcctcggcgccgcgctcgcc 9651
to top
>gb|AY188798.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase
            precursor, gene, complete cds; nuclear gene for
            chloroplast product
          Length = 2594

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 296  ccgccggcgccacggtgggcgccg 319
            ||||||||||||| ||||||||||
Sbjct: 2350 ccgccggcgccaccgtgggcgccg 2373
to top
>gb|AY188797.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase
            precursor, mRNA, complete cds; nuclear gene for
            chloroplast product
          Length = 1566

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 296  ccgccggcgccacggtgggcgccg 319
            ||||||||||||| ||||||||||
Sbjct: 1298 ccgccggcgccaccgtgggcgccg 1321
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     cggcgccgcgctcgccaccg 245
               ||||||||||||||||||||
Sbjct: 2770352 cggcgccgcgctcgccaccg 2770333
to top
>dbj|AK199717.1| Mus musculus cDNA, clone:Y1G0132C24, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000067664, based on BLAT search
          Length = 376

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 ccacctccctcctcctcggc 229
           ||||||||||||||||||||
Sbjct: 310 ccacctccctcctcctcggc 329
to top
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0495C02
          Length = 151467

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 279    acctcggcgcgaggacgccgccgg 302
              |||||||||||| |||||||||||
Sbjct: 100613 acctcggcgcgacgacgccgccgg 100636
to top
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0568D10
          Length = 63101

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   cggccacctccctcctcctc 226
             ||||||||||||||||||||
Sbjct: 21457 cggccacctccctcctcctc 21438
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     cgtcgtcgatgaagtcggcc 211
               ||||||||||||||||||||
Sbjct: 4532595 cgtcgtcgatgaagtcggcc 4532576
to top
>dbj|AK120685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164N07, full
           insert sequence
          Length = 3527

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 cggccacctccctcctcctc 226
           ||||||||||||||||||||
Sbjct: 191 cggccacctccctcctcctc 210
to top
>dbj|AK120526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127B22, full
            insert sequence
          Length = 2156

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  tcggcgccgcgctcgccacc 244
            ||||||||||||||||||||
Sbjct: 1099 tcggcgccgcgctcgccacc 1118
to top
>dbj|AK119209.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E03, full
            insert sequence
          Length = 1605

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 296  ccgccggcgccacggtgggcgccg 319
            ||||||||||||| ||||||||||
Sbjct: 1364 ccgccggcgccaccgtgggcgccg 1387
to top
>dbj|AK111176.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-F03, full
            insert sequence
          Length = 2733

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  tcggcgccgcgctcgccacc 244
            ||||||||||||||||||||
Sbjct: 1134 tcggcgccgcgctcgccacc 1153
to top
>dbj|AK109849.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F06, full
           insert sequence
          Length = 2145

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 279 acctcggcgcgaggacgccgccgg 302
           |||||||||||| |||||||||||
Sbjct: 632 acctcggcgcgacgacgccgccgg 655
to top
>dbj|AK107169.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-F12, full
            insert sequence
          Length = 2424

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  tcggcgccgcgctcgccacc 244
            ||||||||||||||||||||
Sbjct: 1269 tcggcgccgcgctcgccacc 1288
to top
>dbj|AK103850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148L04, full
           insert sequence
          Length = 1179

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 284 ggcgcgaggacgccgccggc 303
           ||||||||||||||||||||
Sbjct: 270 ggcgcgaggacgccgccggc 251
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 373     ggtgagcaagggcgcggtcg 392
               ||||||||||||||||||||
Sbjct: 5696590 ggtgagcaagggcgcggtcg 5696609
to top
>dbj|AK065773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039M24, full
            insert sequence
          Length = 1541

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 296  ccgccggcgccacggtgggcgccg 319
            ||||||||||||| ||||||||||
Sbjct: 1209 ccgccggcgccaccgtgggcgccg 1232
to top
>dbj|AK062081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F10, full
            insert sequence
          Length = 1454

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 296  ccgccggcgccacggtgggcgccg 319
            ||||||||||||| ||||||||||
Sbjct: 1276 ccgccggcgccaccgtgggcgccg 1299
to top
>dbj|AK060973.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E02, full
           insert sequence
          Length = 1178

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 284 ggcgcgaggacgccgccggc 303
           ||||||||||||||||||||
Sbjct: 267 ggcgcgaggacgccgccggc 248
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 31      ctcgctcgccgccgggcttg 50
               ||||||||||||||||||||
Sbjct: 2342279 ctcgctcgccgccgggcttg 2342260
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 207      cggccacctccctcctcctc 226
                ||||||||||||||||||||
Sbjct: 11067143 cggccacctccctcctcctc 11067124
to top
>emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomic region of the
             paromomycin biosynthesis gene cluster, strain NRRL 2455
          Length = 48169

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 78    gctgccacggccagctccagcgcc 101
             |||||||||||| |||||||||||
Sbjct: 34098 gctgccacggcccgctccagcgcc 34075
to top
>emb|AL805900.10| Mouse DNA sequence from clone RP23-85B14 on chromosome 4, complete
            sequence
          Length = 103933

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  cctcctcctcggcgccgcgc 236
            ||||||||||||||||||||
Sbjct: 4749 cctcctcctcggcgccgcgc 4730
to top
>gb|L29018.1|STMSEPR Streptomyces griseus (clone: pDS-C) serine protease gene, complete
            cds
          Length = 1424

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  acgccgccggcgccacggtg 312
            ||||||||||||||||||||
Sbjct: 1293 acgccgccggcgccacggtg 1312
to top
>dbj|AB000322.1| Fagopyrum callianthum DNA for 5.8S rRNA, ITS1 and ITS2
          Length = 629

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 acccctcgctcgccgccggg 46
          ||||||||||||||||||||
Sbjct: 67 acccctcgctcgccgccggg 86


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,053,596
Number of Sequences: 3902068
Number of extensions: 4053596
Number of successful extensions: 116451
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 113080
Number of HSP's gapped (non-prelim): 3372
length of query: 402
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 380
effective length of database: 17,147,199,772
effective search space: 6515935913360
effective search space used: 6515935913360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top