ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart50b08 |
|---|---|
| Clone Library Name | barley_pub |
>BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui| Length = 677 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 52 SRARKAEGERQPPPPSVASVHPLPPSHSYSERTPTETYLASP 177 SRA+K+ + QPPPP H PP S ++ P + P Sbjct: 327 SRAQKSPQQHQPPPPKSPQQHQPPPPKSPQQQPPPQREQTPP 368
>PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2| Length = 691 Score = 32.0 bits (71), Expect = 0.39 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +1 Query: 61 RKAEGERQPPPPSVASVHPLPPSHSYSERTPTETYLASPAVESL 192 ++ + ++Q PPP S HP P S + + PT + PA + L Sbjct: 190 QQQQQQQQQPPPPPTSQHPQPASQAPPQSQPTPPHQPPPASQQL 233
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 30.8 bits (68), Expect = 0.88 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYSERTP 153 PPPPS PLPPS S ++ TP Sbjct: 310 PPPPSRPGPPPLPPSSSGNDETP 332
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 30.8 bits (68), Expect = 0.88 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +2 Query: 32 IPTRLLLHAHGRQRGRGNHPPPP-LLQFIRSLRPIPIP 142 +PT + +G+ GRG PPPP F+ S P P P Sbjct: 237 MPTGQTIGGYGQPAGRGGPPPPPSFAPFLVSTTPGPFP 274
>EXTN_DAUCA (P06599) Extensin precursor| Length = 306 Score = 30.8 bits (68), Expect = 0.88 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = +1 Query: 79 RQPPPPSVASVHPLPPSHSYSERTPTETYLASP 177 + PPPP+ P PP HS TP Y + P Sbjct: 224 KSPPPPTPVYKSPPPPEHSPPPPTPVYKYKSPP 256 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Frame = +1 Query: 76 ERQPPPPSVASVH--PLPPSHSYSERTPTETYLASP 177 E PPPP+ + P PP HS TP Y + P Sbjct: 240 EHSPPPPTPVYKYKSPPPPMHSPPPPTPVYKYKSPP 275
>ODP2_RAT (P08461) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (PDC-E2) (70 kDa mitochondrial autoantigen of Length = 555 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = +1 Query: 85 PPPPSVASVHPLP----PSHSYSERTPTETYLASPAVESLIWETGADL 216 P PP VA+V P+P P+ S + P SP + L E G DL Sbjct: 234 PVPPPVAAVPPIPQPLAPTPSAAPAGPKGRVFVSPLAKKLAAEKGIDL 281
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +1 Query: 55 RARKAEGERQPPPPSVASVHPLPPSHSYSERTPTETYLASPAVE 186 R + R+P PPS HP PP+ Y++ PT Y SP V+ Sbjct: 159 RGQHPPSHRRPSPPSRHG-HPPPPT--YAQPPPTPIYSPSPQVQ 199 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYSERTPTETYLASPA 180 PPPP +H PP H + RTPT TY P+ Sbjct: 538 PPPPR--QIHSPPPPH-WQPRTPTPTYGQPPS 566 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHS-----YSERTPTETYLASPAVES 189 PPPP+ A PLPP++S YS P TY P S Sbjct: 418 PPPPTYAQPPPLPPTYSPPPPAYSP-PPPPTYSPPPPTYS 456 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHS-----YSERTPTETYLASP 177 PPPP+ A P PP++S YS P+ Y P Sbjct: 457 PPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPP 492 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYSERTPTETY 165 PPPP+ P PPS + + PT + Sbjct: 206 PPPPTHVQPTPSPPSRGHQPQPPTHRH 232
>ALF_PETHY (O22621) Protein ALF (Aberrant leaf and flower protein)| Length = 412 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +1 Query: 52 SRARKAEGERQPPPPSVASVHPLPPSHSYSER 147 +R +A QPPPP + PLPP++S R Sbjct: 23 NRLLEAVAPPQPPPPPLPPPQPLPPAYSIRTR 54
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYS-ERTPTETYLASPAVES 189 PPPPS AS P S + S ER T +ASPA S Sbjct: 32 PPPPSAASPGATPGSAAASAERASTAAPVASPAAPS 67
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYS-ERTPTETYLASPAVES 189 PPPPS AS P S + S ER T +ASPA S Sbjct: 32 PPPPSAASPGATPGSATASAERASTAAPVASPAAPS 67
>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) (Brain-derived HLMN protein) Length = 5038 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +1 Query: 61 RKAEGERQPPPPSVASVHPLPPSHSYSERTPTETYLASPA 180 +KAE +++PPP V+ P P + + P +T PA Sbjct: 927 KKAEKDKKPPPGKVSKPPPTEPEKAVLAQKPDKTTKPKPA 966
>CABL2_HUMAN (Q9BTV7) CDK5 and ABL1 enzyme substrate 2 (Interactor with CDK3 2)| (Ik3-2) Length = 478 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +1 Query: 73 GERQPPPPSVASVHPLPPSHSYSERTPTETYLASPAVESLIWETGADL*EDSMPTG 240 GE+ PPPP+ A P PP PT +PA + L+ T +PTG Sbjct: 68 GEKPPPPPAEAREPPAPP----PPEPPTGLPARTPAPQGLLSPT-------QVPTG 112
>MMP21_HUMAN (Q8N119) Matrix metalloproteinase-21 precursor (EC 3.4.24.-)| (MMP-21) Length = 569 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 52 SRARKAEGERQPPPPSVASVHPLPPSHSYSERTP 153 +R R + +PPPPS P PP + S R+P Sbjct: 113 NRPRCGVPDMRPPPPSAPPSPPGPPPRARSRRSP 146
>T22D4_HUMAN (Q9Y3Q8) TSC22 domain family protein 4 (TSC22-related-inducible| leucine zipper protein 2) (Tsc-22-like protein THG-1) Length = 395 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = -2 Query: 112 ELKQRRGGVVASPPLPSVRVK*EAGGNG 29 E + G A+ PLPS+RV+ EAGG+G Sbjct: 199 ETGESAGTSRAATPLPSLRVEAEAGGSG 226
>RPGR_MOUSE (Q9R0X5) X-linked retinitis pigmentosa GTPase regulator (mRpgr)| Length = 1001 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +1 Query: 58 ARKAEGERQPPPPSVASVHPLPPSHSYSERTPTETYLASP 177 AR ER+ PP S + V LPP S T Y +SP Sbjct: 407 ARLRRRERERPPCSASMVGTLPPLEGTSASTSAYFYPSSP 446
>CWC27_NEUCR (Q7SBX8) Peptidyl-prolyl isomerase cwc-27 (EC 5.2.1.8)| Length = 541 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = +1 Query: 70 EGERQPPPPSVASVHPLPPSHSYSERTPTETYLASPAVESLIWETGADL 216 E R P P VA PP YSE + E P +SL+ +T ++ Sbjct: 304 ESRRSPSPQPVAQKKEQPPKKHYSEHSSPEP--EEPKKKSLLEKTNEEI 350
>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated| protein 114) (SAP 114) (SF3a120) Length = 793 Score = 28.1 bits (61), Expect = 5.7 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 70 EGERQPPPPSVASVHPLPPS 129 EG++ PPPP PLPP+ Sbjct: 364 EGQKVPPPPETPMPPPLPPT 383
>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)| Length = 1468 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYSERTPTETYLASPAVE 186 PPPP P PP S+ + + Y PA+E Sbjct: 957 PPPPPPGLAPPPPPGLSFGLSSSSSQYPRKPAIE 990
>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)| (Proline-rich synapse associated protein 2) (ProSAP2) (SPANK-2) Length = 1815 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = +1 Query: 70 EGERQPPPPSVASVHPLPPSHSYSERTPTETYLASPAVESLIWET 204 EG PPPP A P PP+ Y + P T+ P ++T Sbjct: 883 EGRGIPPPPQTAP--PPPPAPYYFDSGPPPTFSPPPPPPGRAYDT 925
>RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/interference| protein 3) Length = 980 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +1 Query: 49 TSRARKAEGERQPPPPSVASVHPLPPSHSYSERTP 153 TS K R PPPP + +V P+ P+ + P Sbjct: 265 TSPTSKGSPRRPPPPPPLPTVPPIGPARPLAPPVP 299
>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)| Length = 1206 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYSERTPTETYLASPAVE 186 PPPP P PP S+ + + Y PA+E Sbjct: 731 PPPPPPGLAPPPPPGLSFGLSSSSSQYPRKPAIE 764
>EMX2_HUMAN (Q04743) Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty| spiracles-like protein 2) Length = 252 Score = 28.1 bits (61), Expect = 5.7 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 Query: 88 PPPSVASVHPLPPSHS 135 PPP + HPLP SHS Sbjct: 89 PPPHALAAHPLPSSHS 104 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +1 Query: 67 AEGERQPPPPSVASVHPLPPSHSYSERTPTETYLASPAVES 189 AE PP P+V VHP+PP H+ + ++ P S Sbjct: 72 AEAVSHPPNPAVP-VHPVPPPHALAAHPLPSSHSPHPLFAS 111
>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)| Length = 791 Score = 28.1 bits (61), Expect = 5.7 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 70 EGERQPPPPSVASVHPLPPS 129 EG++ PPPP PLPP+ Sbjct: 362 EGQKVPPPPETPMPPPLPPT 381
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 58 ARKAEGERQPPPPSVASVHPLPPSHSYSERTP 153 A + + PPPP + PL P+ S S+ TP Sbjct: 552 APQQQTSSSPPPPLLTPPPPLQPASSISDHTP 583
>DEND_RAT (P50617) Dendrin| Length = 653 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 8/56 (14%) Frame = -2 Query: 154 LASARNRNGTEGADELKQR--------RGGVVASPPLPSVRVK*EAGGNGKGREGA 11 LA+A +G +G + K G ++SPP P R + G+ KG+EG+ Sbjct: 266 LAAAGLNSGGDGHSQAKTTGPVTEVALSGSTISSPPRPVPRSRQHLRGSRKGKEGS 321
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 7/42 (16%) Frame = +1 Query: 85 PPPPSVASVHPLPP-----SHS--YSERTPTETYLASPAVES 189 PPPP P PP SHS +R+PT T SP++ S Sbjct: 636 PPPPPKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRSPSLSS 677
>NETR_GORGO (Q5G270) Neurotrypsin precursor (EC 3.4.21.-)| Length = 876 Score = 27.7 bits (60), Expect = 7.4 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%) Frame = +2 Query: 17 FPSLPIPTRLLLHAHGRQRGRGNHPPPPLLQFIRSLRPIPI--PSGRQQRHI*LAPLWRA 190 +PS +PT+ QR PPPPL +F R R +P P Q H W Sbjct: 43 YPSYYLPTQ--------QRPPRTRPPPPLPRFPRPPRALPAQRPHALQAGHTPRPHPWGC 94 Query: 191 *FGRP 205 G P Sbjct: 95 PAGEP 99
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic| chromosome-associated protein) (MCAP) Length = 1400 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = +1 Query: 49 TSRARKAEGERQPPPPSVASVHPLPPSHSYSERTPTET 162 TS+ + + QP P + AS +P PP S + +T Sbjct: 23 TSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQT 60
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)| Length = 1362 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = +1 Query: 49 TSRARKAEGERQPPPPSVASVHPLPPSHSYSERTPTET 162 TS+ + + QP P + AS +P PP S + +T Sbjct: 23 TSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQT 60
>LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large| tumor suppressor homolog 1) (WARTS protein kinase) Length = 1129 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +1 Query: 52 SRARKAEGER--QPPPPSVASVHPLPP 126 ++A + G+R PPPP V SV P PP Sbjct: 224 AQAHPSNGQRVNPPPPPQVRSVTPPPP 250
>ALX4_MOUSE (O35137) Homeobox protein aristaless-like 4 (ALX-4)| Length = 399 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 82 QPPPPSVASVHPLPPSHSYSERTPTET 162 QPP P P PP+H Y +R +T Sbjct: 93 QPPTPQPPPAPPAPPAHLYLQRGACKT 119
>ACE_RABIT (P12822) Angiotensin-converting enzyme, somatic isoform precursor| (EC 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II) [Contains: Angiotensin-converting enzyme, somatic isoform, soluble form] Length = 1310 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +2 Query: 56 AHGRQRGRGNHPPPPLLQFIRSLRPIP 136 A GR+ R PPPPLL + LRP P Sbjct: 4 APGRRGPRLLRPPPPLLLLLLLLRPPP 30
>STNB_DROME (Q24212) Protein stoned-B (StonedB) (Stn-B)| Length = 1262 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +1 Query: 82 QPPPPSVASVHPLPPSHSYSERTPTETYLASP 177 +PPPP A P PP + +R P +P Sbjct: 237 RPPPPRPAPPRPAPPGQAAPQRPPPPLAAVNP 268
>CP2BA_MOUSE (P12791) Cytochrome P450 2B10 (EC 1.14.14.1) (CYPIIB10)| (Testosterone 16-alpha hydroxylase) (P450-16-alpha) (Clone PF3/46) Length = 500 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 44 LLLHAHGRQRGRGNHPPPPLLQFIRSLRPIPI 139 LLL A G + RGN PP P RP+P+ Sbjct: 16 LLLLARGHPKSRGNFPPGP--------RPLPL 39
>ABI3_MOUSE (Q8BYZ1) ABI gene family member 3 (New molecule including SH3)| (Nesh) Length = 367 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYSERTPTETYLASPAVE 186 PPPP VA V P PP S E +L P +E Sbjct: 238 PPPPPVAPVTPPPPPLS------AEVFLPPPPLE 265
>CATA_BOVIN (P00432) Catalase (EC 1.11.1.6)| Length = 526 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 261 DEHPPHGSRRHAVLSKICSGLPNQALHS 178 D HP +GSR A+L K P A+H+ Sbjct: 483 DVHPEYGSRIQALLDKYNEEKPKNAVHT 510
>BIB_DROME (P23645) Neurogenic protein big brain| Length = 696 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +1 Query: 49 TSRARKAEGERQPPPPSVASVHPLP---PSHSYSERTPTETYLASPAVES 189 T AR E PPPP + P P +H RT +E +++P V S Sbjct: 590 TPPARHPSVEPSPPPPPMLMYAPPPQPNAAHPQPIRTQSERKVSAPVVVS 639
>DYHC_EMENI (P45444) Dynein heavy chain, cytosolic (DYHC)| Length = 4344 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +1 Query: 136 YSERTPTETYLASPAVESLIWETGADL*EDSMPTG 240 ++E T T + + + VESL +T DL +DS+P+G Sbjct: 2368 FNEDTVTPSMIITNYVESLKTKTFEDLDDDSVPSG 2402
>RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX) (Enhancer factor| C) (EF-C) Length = 979 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1 Query: 64 KAEGERQPPPPSVASVHPLPPSHSYSERTPTETYLASP 177 +A+ + PPPP A P PP+ + + + T L SP Sbjct: 24 QAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSP 61
>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (mDomino) Length = 3072 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +1 Query: 61 RKAEGERQPPPPSVASVHPLPPSHSYSERTPTETYLASPAVE 186 ++ + ++QPPPP P+P + S +TP PAV+ Sbjct: 2472 QQQQQQQQPPPPPQQPPPPVPQPQAASSQTPA----GQPAVQ 2509
>EMX2_MOUSE (Q04744) Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty| spiracles-like protein 2) Length = 253 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 67 AEGERQPPPPSVASVHPLPPSHS 135 AE PP P+V VHP+PP H+ Sbjct: 73 AEAVSHPPNPAVP-VHPVPPPHA 94
>CP2BK_MOUSE (Q62397) Cytochrome P450 2B20 (EC 1.14.14.1) (CYPIIB20) (P24)| (Fragment) Length = 470 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 44 LLLHAHGRQRGRGNHPPPPLLQFIRSLRPIPI 139 LLL A G + RGN PP P RP+P+ Sbjct: 16 LLLLARGHPKSRGNFPPGP--------RPLPL 39
>RAGE_BOVIN (Q28173) Advanced glycosylation end product-specific receptor| precursor (Receptor for advanced glycosylation end products) Length = 416 Score = 27.3 bits (59), Expect = 9.7 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +2 Query: 92 PPPLLQFIRSLRPIPIPSG 148 PPP + +I+ RP+P+P G Sbjct: 275 PPPQIHWIKDGRPLPLPPG 293
>NFIA_MOUSE (Q02780) Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A)| (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 532 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYSERTPTETYLASP 177 PPPP +A PLP + T TE ASP Sbjct: 463 PPPPPMARPVPLPMPDTKPPTTSTEGGAASP 493
>NETR_SAGLB (Q5G265) Neurotrypsin precursor (EC 3.4.21.-)| Length = 875 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Frame = +2 Query: 47 LLHAH---GRQRGRGNHPPPPLLQFIRSLRPIP 136 LL+ H QR R PPPPL +F R R +P Sbjct: 41 LLYPHYLPTEQRHRRTRPPPPLPRFPRPPRALP 73
>NFIA_RAT (P09414) Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A)| (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 509 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYSERTPTETYLASP 177 PPPP +A PLP + T TE ASP Sbjct: 440 PPPPPMARPVPLPMPDTKPPTTSTEGGAASP 470
>NFIA_HUMAN (Q12857) Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A)| (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 509 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +1 Query: 85 PPPPSVASVHPLPPSHSYSERTPTETYLASP 177 PPPP +A PLP + T TE ASP Sbjct: 440 PPPPPMARPVPLPVPDTKPPTTSTEGGAASP 470
>LATS1_HUMAN (O95835) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large| tumor suppressor homolog 1) (WARTS protein kinase) (h-warts) Length = 1130 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +1 Query: 55 RARKAEGER--QPPPPSVASVHPLPP 126 +A + G+R PPPP V SV P PP Sbjct: 225 QAHPSNGQRVNPPPPPQVRSVTPPPP 250
>CU01_ANOGA (Q17015) Cuticle protein (Fragment)| Length = 160 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 94 PSVASVHPLPPSHSYSERTPTETYLASPAV 183 P+VA P+ + SY+ T+TY+A PA+ Sbjct: 103 PAVAYAAPVAKTISYAAPVATKTYVAQPAL 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.130 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,145,076 Number of Sequences: 219361 Number of extensions: 849837 Number of successful extensions: 4565 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3614 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4440 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
