ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart50b01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Minus Query: 189 tggtccagccccagccgaaccaactcacgtaccacaacggcgccgtgctgcgcggcgaca 248 ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||| Sbjct: 6192145 tggtcaagccccagccgaaccagctcacgtaccacaatggcgccgtgctgagcggcgaca 6192086 Query: 249 tccccgtctccgtcctctggtacggccgcttcacggcggcgcagaaggccatcgtctccg 308 ||||||| || |||||||||||||||| |||||| |||||||||||||| ||||| ||| Sbjct: 6192085 tccccgtgtcgatcctctggtacggccggttcacgccggcgcagaaggccgtcgtcaccg 6192026 Query: 309 acttcctcctctccctctccgccgcgccgcgcgcgtccccggcgccgtccgtgtcccagt 368 ||||| ||||||| ||| |||| ||| || ||| | ||||||||||| ||||| |||| Sbjct: 6192025 acttcgtcctctcgctcgccgcgccgctgcaggcggcgccggcgccgtcggtgtcgcagt 6191966 Query: 369 ggtggagcagcatccaccagctgtacctctccaaggcggcggccgtcggcaagcacgg 426 ||||| | || || |||| |||||||||||||||||||| ||||||||||||| |||| Sbjct: 6191965 ggtggggtagtattcaccggctgtacctctccaaggcggtggccgtcggcaagaacgg 6191908 Score = 79.8 bits (40), Expect = 7e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 226 cggcgccgtgctgcgcggcgacatccccgtctccgtcctctggtacggccgcttcacggc 285 |||||||||||| |||||||||| |||||| || || | |||||||| |||| | | Sbjct: 6210475 cggcgccgtgctcggcggcgacattcccgtcaccctcgtgtggtacgggaagttcaagcc 6210534 Query: 286 ggcgcagaaggccatcgtctccgacttcctcctctccctc 325 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 6210535 ggcgcagaaggccatcgtcgtcgacttcctcctctccctc 6210574
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Minus Query: 189 tggtccagccccagccgaaccaactcacgtaccacaacggcgccgtgctgcgcggcgaca 248 ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||| Sbjct: 105964 tggtcaagccccagccgaaccagctcacgtaccacaatggcgccgtgctgagcggcgaca 105905 Query: 249 tccccgtctccgtcctctggtacggccgcttcacggcggcgcagaaggccatcgtctccg 308 ||||||| || |||||||||||||||| |||||| |||||||||||||| ||||| ||| Sbjct: 105904 tccccgtgtcgatcctctggtacggccggttcacgccggcgcagaaggccgtcgtcaccg 105845 Query: 309 acttcctcctctccctctccgccgcgccgcgcgcgtccccggcgccgtccgtgtcccagt 368 ||||| ||||||| ||| |||| ||| || ||| | ||||||||||| ||||| |||| Sbjct: 105844 acttcgtcctctcgctcgccgcgccgctgcaggcggcgccggcgccgtcggtgtcgcagt 105785 Query: 369 ggtggagcagcatccaccagctgtacctctccaaggcggcggccgtcggcaagcacgg 426 ||||| | || || |||| |||||||||||||||||||| ||||||||||||| |||| Sbjct: 105784 ggtggggtagtattcaccggctgtacctctccaaggcggtggccgtcggcaagaacgg 105727 Score = 79.8 bits (40), Expect = 7e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 226 cggcgccgtgctgcgcggcgacatccccgtctccgtcctctggtacggccgcttcacggc 285 |||||||||||| |||||||||| |||||| || || | |||||||| |||| | | Sbjct: 124294 cggcgccgtgctcggcggcgacattcccgtcaccctcgtgtggtacgggaagttcaagcc 124353 Query: 286 ggcgcagaaggccatcgtctccgacttcctcctctccctc 325 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 124354 ggcgcagaaggccatcgtcgtcgacttcctcctctccctc 124393
>gb|AY570727.1| Oryza sativa (japonica cultivar-group) putative phi-1-like phosphate-induced protein mRNA, partial cds Length = 874 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Plus Query: 189 tggtccagccccagccgaaccaactcacgtaccacaacggcgccgtgctgcgcggcgaca 248 ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||| Sbjct: 154 tggtcaagccccagccgaaccagctcacgtaccacaatggcgccgtgctgagcggcgaca 213 Query: 249 tccccgtctccgtcctctggtacggccgcttcacggcggcgcagaaggccatcgtctccg 308 ||||||| || |||||||||||||||| |||||| |||||||||||||| ||||| ||| Sbjct: 214 tccccgtgtcgatcctctggtacggccggttcacgccggcgcagaaggccgtcgtcaccg 273 Query: 309 acttcctcctctccctctccgccgcgccgcgcgcgtccccggcgccgtccgtgtcccagt 368 ||||| ||||||| ||| |||| ||| || ||| | ||||||||||| ||||| |||| Sbjct: 274 acttcgtcctctcgctcgccgcgccgctgcaggcggcgccggcgccgtcggtgtcgcagt 333 Query: 369 ggtggagcagcatccaccagctgtacctctccaaggcggcggccgtcggcaagcacgg 426 ||||| | || || |||| |||||||||||||||||||| ||||||||||||| |||| Sbjct: 334 ggtggggtagtattcaccggctgtacctctccaaggcggtggccgtcggcaagaacgg 391
>ref|XM_467877.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1222 Score = 192 bits (97), Expect = 7e-46 Identities = 177/203 (87%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 209 caactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctgg 268 ||||||||||||||||||||| ||||| |||| |||||||||||||| || ||| ||||| Sbjct: 219 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 278 Query: 269 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 328 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 279 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 338 Query: 329 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 388 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 339 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 395 Query: 389 ctgtacctctccaaggcggcggc 411 |||||||| |||||||||||||| Sbjct: 396 ctgtacctgtccaaggcggcggc 418
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 192 bits (97), Expect = 7e-46 Identities = 177/203 (87%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 209 caactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctgg 268 ||||||||||||||||||||| ||||| |||| |||||||||||||| || ||| ||||| Sbjct: 31860043 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 31859984 Query: 269 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 328 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 31859983 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 31859924 Query: 329 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 388 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 31859923 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 31859867 Query: 389 ctgtacctctccaaggcggcggc 411 |||||||| |||||||||||||| Sbjct: 31859866 ctgtacctgtccaaggcggcggc 31859844 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 207 accaactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctct 266 |||| |||||||||||| ||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 31843545 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 31843486 Query: 267 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 326 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 31843485 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 31843426 Query: 327 ccgccgcgccg 337 ||| ||||||| Sbjct: 31843425 ccggcgcgccg 31843415 Score = 56.0 bits (28), Expect = 1e-04 Identities = 150/190 (78%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 218 taccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctggtacggccgc 277 ||||||| |||||||||||| | ||| ||||||| || ||| || |||||||||| Sbjct: 31854610 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 31854551 Query: 278 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 337 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 31854550 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 31854491 Query: 338 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 397 || || | ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 31854490 tacg---ccgccgcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 31854434 Query: 398 tccaaggcgg 407 |||||||||| Sbjct: 31854433 tccaaggcgg 31854424 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 314 ctcctctccctctccgccgcgccgcgcgc 342 |||||||||||| |||||||||||||||| Sbjct: 11756274 ctcctctccctcgccgccgcgccgcgcgc 11756302 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cggcgccgtgctgcgcggcgac 247 |||||||||||||||||||||| Sbjct: 18242146 cggcgccgtgctgcgcggcgac 18242125
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 192 bits (97), Expect = 7e-46 Identities = 177/203 (87%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 209 caactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctgg 268 ||||||||||||||||||||| ||||| |||| |||||||||||||| || ||| ||||| Sbjct: 21044 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 20985 Query: 269 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 328 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 20984 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 20925 Query: 329 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 388 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 20924 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 20868 Query: 389 ctgtacctctccaaggcggcggc 411 |||||||| |||||||||||||| Sbjct: 20867 ctgtacctgtccaaggcggcggc 20845 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 207 accaactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctct 266 |||| |||||||||||| ||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 4546 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 4487 Query: 267 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 326 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 4486 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 4427 Query: 327 ccgccgcgccg 337 ||| ||||||| Sbjct: 4426 ccggcgcgccg 4416 Score = 56.0 bits (28), Expect = 1e-04 Identities = 150/190 (78%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 218 taccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctggtacggccgc 277 ||||||| |||||||||||| | ||| ||||||| || ||| || |||||||||| Sbjct: 15611 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 15552 Query: 278 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 337 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 15551 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 15492 Query: 338 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 397 || || | ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 15491 tacg---ccgccgcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 15435 Query: 398 tccaaggcgg 407 |||||||||| Sbjct: 15434 tccaaggcgg 15425
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 192 bits (97), Expect = 7e-46 Identities = 177/203 (87%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 209 caactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctgg 268 ||||||||||||||||||||| ||||| |||| |||||||||||||| || ||| ||||| Sbjct: 155841 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 155782 Query: 269 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 328 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 155781 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 155722 Query: 329 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 388 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 155721 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 155665 Query: 389 ctgtacctctccaaggcggcggc 411 |||||||| |||||||||||||| Sbjct: 155664 ctgtacctgtccaaggcggcggc 155642 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 207 accaactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctct 266 |||| |||||||||||| ||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 139343 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 139284 Query: 267 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 326 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 139283 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 139224 Query: 327 ccgccgcgccg 337 ||| ||||||| Sbjct: 139223 ccggcgcgccg 139213 Score = 56.0 bits (28), Expect = 1e-04 Identities = 150/190 (78%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 218 taccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctggtacggccgc 277 ||||||| |||||||||||| | ||| ||||||| || ||| || |||||||||| Sbjct: 150408 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 150349 Query: 278 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 337 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 150348 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 150289 Query: 338 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 397 || || | ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 150288 tacg---ccgccgcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 150232 Query: 398 tccaaggcgg 407 |||||||||| Sbjct: 150231 tccaaggcgg 150222
>dbj|AK063605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C09, full insert sequence Length = 1222 Score = 192 bits (97), Expect = 7e-46 Identities = 177/203 (87%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 209 caactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctgg 268 ||||||||||||||||||||| ||||| |||| |||||||||||||| || ||| ||||| Sbjct: 219 caactcacgtaccacaacggcaccgtgttgcggggcgacatccccgtgtcggtcgtctgg 278 Query: 269 tacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctcc 328 ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 279 tacggccgcttcacgccggcgcagaaggccgtcgtctccgacttcctcctcttgctcacc 338 Query: 329 gccgcgccgcgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccag 388 | ||| ||| || | ||| | ||||||||||| |||||||||| || |||| ||||| Sbjct: 339 gtcgcctcgc---cggcgccgaccccgtccgtgtcgcagtggtggaacaccatcaaccag 395 Query: 389 ctgtacctctccaaggcggcggc 411 |||||||| |||||||||||||| Sbjct: 396 ctgtacctgtccaaggcggcggc 418
>dbj|AK061401.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G10, full insert sequence Length = 962 Score = 186 bits (94), Expect = 4e-44 Identities = 178/206 (86%) Strand = Plus / Plus Query: 221 cacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctggtacggccgcttc 280 ||||| |||||||||||| |||||||||||||||| || |||||||||||||||| ||| Sbjct: 1 cacaatggcgccgtgctgagcggcgacatccccgtgtcgatcctctggtacggccggttc 60 Query: 281 acggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccgcgc 340 ||| |||||||||||||| ||||| |||||||| ||||||| ||| |||| ||| || Sbjct: 61 acgccggcgcagaaggccgtcgtcaccgacttcgtcctctcgctcgccgcgccgctgcag 120 Query: 341 gcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctctcc 400 ||| | ||||||||||| ||||| ||||||||| | || || |||| ||||||||||||| Sbjct: 121 gcggcgccggcgccgtcggtgtcgcagtggtggggtagtattcaccggctgtacctctcc 180 Query: 401 aaggcggcggccgtcggcaagcacgg 426 ||||||| ||||||||||||| |||| Sbjct: 181 aaggcggtggccgtcggcaagaacgg 206
>dbj|AK099621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053E02, full insert sequence Length = 837 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Minus Query: 189 tggtccagccccagccgaaccaactcacgtaccacaacggcgccgtgctgcgcggcgaca 248 ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||| Sbjct: 568 tggtcaagccccagccgaaccagctcacgtaccacaatggcgccgtgctgagcggcgaca 509 Query: 249 tccccgtctccgtcctctggtacggccgcttcacggcggcgcagaaggccatcgtctccg 308 ||||||| || |||||||||||||||| |||||| |||||||||||||| ||||| ||| Sbjct: 508 tccccgtgtcgatcctctggtacggccggttcacgccggcgcagaaggccgtcgtcaccg 449 Query: 309 acttcctcctctc 321 ||||| ||||||| Sbjct: 448 acttcgtcctctc 436
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 79.8 bits (40), Expect = 7e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 226 cggcgccgtgctgcgcggcgacatccccgtctccgtcctctggtacggccgcttcacggc 285 |||||||||||| |||||||||| |||||| || || | |||||||| |||| | | Sbjct: 4551 cggcgccgtgctcggcggcgacattcccgtcaccctcgtgtggtacgggaagttcaagcc 4610 Query: 286 ggcgcagaaggccatcgtctccgacttcctcctctccctc 325 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 4611 ggcgcagaaggccatcgtcgtcgacttcctcctctccctc 4650
>ref|XM_506983.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.37-2 mRNA Length = 1129 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 207 accaactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctct 266 |||| |||||||||||| ||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 211 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 270 Query: 267 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 326 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 271 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 330 Query: 327 ccgccgcgccg 337 ||| ||||||| Sbjct: 331 ccggcgcgccg 341
>ref|XM_467873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1127 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 207 accaactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctct 266 |||| |||||||||||| ||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 209 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 268 Query: 267 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 326 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 269 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 328 Query: 327 ccgccgcgccg 337 ||| ||||||| Sbjct: 329 ccggcgcgccg 339
>ref|XM_467872.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 207 accaactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctct 266 |||| |||||||||||| ||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 210 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 269 Query: 267 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 326 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 270 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 329 Query: 327 ccgccgcgccg 337 ||| ||||||| Sbjct: 330 ccggcgcgccg 340
>dbj|AK119695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-C06, full insert sequence Length = 1110 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 207 accaactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctct 266 |||| |||||||||||| ||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 210 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 269 Query: 267 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 326 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 270 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 329 Query: 327 ccgccgcgccg 337 ||| ||||||| Sbjct: 330 ccggcgcgccg 340
>dbj|AK101655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057F02, full insert sequence Length = 1128 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 207 accaactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctct 266 |||| |||||||||||| ||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 211 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 270 Query: 267 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 326 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 271 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 330 Query: 327 ccgccgcgccg 337 ||| ||||||| Sbjct: 331 ccggcgcgccg 341
>dbj|AK063454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G05, full insert sequence Length = 1127 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 207 accaactcacgtaccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctct 266 |||| |||||||||||| ||||| |||||| | ||||||||||| || ||| |||||| Sbjct: 209 accagctcacgtaccaccacggcagcgtgctcagtggcgacatcccggtgtccatcctct 268 Query: 267 ggtacggccgcttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctct 326 |||||||| |||||| || |||||| | | ||| || |||||||| || |||| ||| Sbjct: 269 ggtacggcaaattcacgccgacgcagatgtcgatcatcgccgacttcgtcgtctcgctca 328 Query: 327 ccgccgcgccg 337 ||| ||||||| Sbjct: 329 ccggcgcgccg 339
>ref|XM_467876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1193 Score = 56.0 bits (28), Expect = 1e-04 Identities = 150/190 (78%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 218 taccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctggtacggccgc 277 ||||||| |||||||||||| | ||| ||||||| || ||| || |||||||||| Sbjct: 237 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 296 Query: 278 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 337 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 297 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 356 Query: 338 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 397 ||| || ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 357 tacgccgcc---gcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 413 Query: 398 tccaaggcgg 407 |||||||||| Sbjct: 414 tccaaggcgg 423
>dbj|AK062900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F03, full insert sequence Length = 1193 Score = 56.0 bits (28), Expect = 1e-04 Identities = 150/190 (78%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 218 taccacaacggcgccgtgctgcgcggcgacatccccgtctccgtcctctggtacggccgc 277 ||||||| |||||||||||| | ||| ||||||| || ||| || |||||||||| Sbjct: 237 taccacagcggcgccgtgctccagggcaacatcccggtgtccatctactggtacggcaag 296 Query: 278 ttcacggcggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccg 337 |||||| ||||||||||| | || ||| |||||||||||| || ||||| | ||||| Sbjct: 297 ttcacgccggcgcagaagtcgatactcttcgacttcctcctgtcgctctcggtggcgccc 356 Query: 338 cgcgcgtccccggcgccgtccgtgtcccagtggtggagcagcatccaccagctgtacctc 397 ||| || ||||||||||| | |||||||||||||||||| || |||| ||| | Sbjct: 357 tacgccgcc---gcgccgtccgttgcgcagtggtggagcagcatcgacgagctctactta 413 Query: 398 tccaaggcgg 407 |||||||||| Sbjct: 414 tccaaggcgg 423
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 286 ggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccgc 338 ||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 17962 ggcgcagaaggccatcgtcgttaacttcctcctctccctcacggccacgccgc 18014
>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11, complete sequence Length = 98103 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 286 ggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccgc 338 ||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 54889 ggcgcagaaggccatcgtcgttaacttcctcctctccctcacggccacgccgc 54941
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 286 ggcgcagaaggccatcgtctccgacttcctcctctccctctccgccgcgccgc 338 ||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 19689888 ggcgcagaaggccatcgtcgttaacttcctcctctccctcacggccacgccgc 19689940
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0477B05 Length = 142166 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 314 ctcctctccctctccgccgcgccgcgcgc 342 |||||||||||| |||||||||||||||| Sbjct: 64164 ctcctctccctcgccgccgcgccgcgcgc 64192
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 333 cgccgcgcgcgtccccggcgccg 355 ||||||||||||||||||||||| Sbjct: 86700 cgccgcgcgcgtccccggcgccg 86678
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 333 cgccgcgcgcgtccccggcgccg 355 ||||||||||||||||||||||| Sbjct: 24609798 cgccgcgcgcgtccccggcgccg 24609776 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ctccctctccgccgcgccgc 338 |||||||||||||||||||| Sbjct: 13024258 ctccctctccgccgcgccgc 13024277
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 333 cgccgcgcgcgtccccggcgccg 355 ||||||||||||||||||||||| Sbjct: 24921468 cgccgcgcgcgtccccggcgccg 24921446 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ctccctctccgccgcgccgc 338 |||||||||||||||||||| Sbjct: 13104437 ctccctctccgccgcgccgc 13104456
>ref|XM_483034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 ctctggtacggccgcttcacggcggcgcag 292 |||||||||||||||||||| |||||||| Sbjct: 205 ctctggtacggccgcttcaccccggcgcag 234
>ref|XM_465905.1| Oryza sativa (japonica cultivar-group), mRNA Length = 777 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cggcgccgtgctgcgcggcgac 247 |||||||||||||||||||||| Sbjct: 300 cggcgccgtgctgcgcggcgac 321
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 tcctcctctccctctccgccgcgccg 337 |||||||||||| ||||||||||||| Sbjct: 7860525 tcctcctctccccctccgccgcgccg 7860550 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 327 ccgccgcgccgcgcgcgtccccggcgccg 355 |||||||||||| |||||||||||||||| Sbjct: 7084609 ccgccgcgccgc-cgcgtccccggcgccg 7084582 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 gccgtcggcaagcacggcgccggc 433 ||||||||| |||||||||||||| Sbjct: 12794606 gccgtcggcgagcacggcgccggc 12794583
>emb|AL080251.23|HSDJ93P18 Human DNA sequence from clone RP1-93P18 on chromosome 1p35.2-36.23 Contains the 5' end of the ALDH4A1 gene for aldehyde dehydrogenase 4 family, member A1, a novel gene and a CpG island, complete sequence Length = 103216 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 183 tgttcctggtccagccccagcc 204 |||||||||||||||||||||| Sbjct: 90519 tgttcctggtccagccccagcc 90540
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 263 ctctggtacggccgcttcacggcggcgcag 292 |||||||||||||||||||| |||||||| Sbjct: 23963195 ctctggtacggccgcttcaccccggcgcag 23963166 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acttcctcctctccctctcc 328 |||||||||||||||||||| Sbjct: 22765819 acttcctcctctccctctcc 22765838
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 tcctcctctccctctccgccgcgccg 337 |||||||||||| ||||||||||||| Sbjct: 7858360 tcctcctctccccctccgccgcgccg 7858385 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 327 ccgccgcgccgcgcgcgtccccggcgccg 355 |||||||||||| |||||||||||||||| Sbjct: 7082504 ccgccgcgccgc-cgcgtccccggcgccg 7082477 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ctccctctccgccgcgccgc 338 |||||||||||||||||||| Sbjct: 24737596 ctccctctccgccgcgccgc 24737615 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 gccgtcggcaagcacggcgccggc 433 ||||||||| |||||||||||||| Sbjct: 12791369 gccgtcggcgagcacggcgccggc 12791346
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 tcctcctctccctctccgccgcgccg 337 |||||||||||| ||||||||||||| Sbjct: 46123 tcctcctctccccctccgccgcgccg 46148
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052M16 Length = 145423 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cggcgccgtgctgcgcggcgac 247 |||||||||||||||||||||| Sbjct: 43359 cggcgccgtgctgcgcggcgac 43338
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cggcgccgtgctgcgcggcgac 247 |||||||||||||||||||||| Sbjct: 165547 cggcgccgtgctgcgcggcgac 165526
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 263 ctctggtacggccgcttcacggcggcgcag 292 |||||||||||||||||||| |||||||| Sbjct: 96346 ctctggtacggccgcttcaccccggcgcag 96317
>dbj|AK121154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O05, full insert sequence Length = 1956 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 tcctcctctccctctccgccgcgccg 337 |||||||||||| ||||||||||||| Sbjct: 254 tcctcctctccccctccgccgcgccg 279
>dbj|AK073011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145I01, full insert sequence Length = 922 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 ctctggtacggccgcttcacggcggcgcag 292 |||||||||||||||||||| |||||||| Sbjct: 205 ctctggtacggccgcttcaccccggcgcag 234
>gb|DQ333338.1| Oryza sativa (japonica cultivar-group) UDP-glucuronic acid 4-epimerase isoform 1 mRNA, complete cds Length = 1455 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 tcctcctctccctctccgccgcgccg 337 |||||||||||| ||||||||||||| Sbjct: 191 tcctcctctccccctccgccgcgccg 216
>gb|BC025264.1| Homo sapiens YTH domain family, member 1, mRNA (cDNA clone IMAGE:5087992), partial cds Length = 1763 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1473 cctcctcctcctcctggcgct 1453
>gb|BC016920.2| Homo sapiens YTH domain family, member 1, mRNA (cDNA clone IMAGE:3853372), partial cds Length = 2683 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1353 cctcctcctcctcctggcgct 1333
>gb|BC003681.1| Homo sapiens YTH domain family, member 1, mRNA (cDNA clone IMAGE:3453235), partial cds Length = 2952 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1610 cctcctcctcctcctggcgct 1590
>ref|XM_525419.1| PREDICTED: Pan troglodytes YTH domain family 1 (LOC470035), mRNA Length = 3021 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1540 cctcctcctcctcctggcgct 1520
>ref|NM_193227.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1089 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 cctctccgccgcgccgcgcgc 342 ||||||||||||||||||||| Sbjct: 318 cctctccgccgcgccgcgcgc 298
>ref|XM_426003.1| PREDICTED: Gallus gallus similar to eomesodermin; t box, brain, 2; eomesodermin (Xenopus laevis) homolog (LOC428443), mRNA Length = 2064 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 acggcgccgtgctgcgcggcg 245 ||||||||||||||||||||| Sbjct: 410 acggcgccgtgctgcgcggcg 390
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 aggcggcggccgtcggcaagc 422 ||||||||||||||||||||| Sbjct: 1171038 aggcggcggccgtcggcaagc 1171018
>gb|AC133946.3| Mus musculus BAC clone RP24-188D7 from chromosome 17, complete sequence Length = 170090 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 agaagcctcctcctcctcctg 118 ||||||||||||||||||||| Sbjct: 118686 agaagcctcctcctcctcctg 118666
>ref|XM_543093.2| PREDICTED: Canis familiaris similar to YTH domain protein 1 (Dermatomyositis associated with cancer putative autoantigen-1 homolog) (DACA-1 homolog) (LOC485968), mRNA Length = 3041 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 2401 cctcctcctcctcctggcgct 2381
>ref|XM_805419.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508811.55) partial mRNA Length = 918 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 gcctcctcctcctcctggcgc 122 ||||||||||||||||||||| Sbjct: 449 gcctcctcctcctcctggcgc 429
>gb|AC122053.3| Mus musculus BAC clone RP24-463C3 from 3, complete sequence Length = 151640 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 gaagcctcctcctcctcctgg 119 ||||||||||||||||||||| Sbjct: 57812 gaagcctcctcctcctcctgg 57792
>emb|AL645504.10| Human DNA sequence from clone RP11-90L20 on chromosome 1 Contains the 3' end of the NAV1 gene for neuron navigator 1, two novel genes and the 5' end of the IPO9 gene for importin 9, complete sequence Length = 201934 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 69129 cccctcttcctcccctcccca 69109
>emb|AL583863.16| Human DNA sequence from clone RP11-118G19 on chromosome 1, complete sequence Length = 113372 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gagaagcctcctcctcctcct 117 ||||||||||||||||||||| Sbjct: 13800 gagaagcctcctcctcctcct 13820
>emb|AL096828.29|HSJ963E22 Human DNA sequence from clone RP5-963E22 on chromosome 20 Contains the C20orf21 gene for a novel protein similar to high-gluose-regulated protein 8 (HGRG8) and five CpG islands, complete sequence Length = 140152 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 111852 cctcctcctcctcctggcgct 111872
>emb|AL031597.7|HS996D20 Human DNA sequence from clone RP5-996D20 on chromosome 22q13.31-13.32, complete sequence Length = 98100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 25810 cccctcttcctcccctcccca 25830
>gb|BC050284.1| Homo sapiens YTH domain family, member 1, mRNA (cDNA clone MGC:41808 IMAGE:5298438), complete cds Length = 3265 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1936 cctcctcctcctcctggcgct 1916
>gb|AC163106.4| Mus musculus BAC clone RP23-278O13 from chromosome 3, complete sequence Length = 200512 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 gaagcctcctcctcctcctgg 119 ||||||||||||||||||||| Sbjct: 9177 gaagcctcctcctcctcctgg 9157
>dbj|AK095795.1| Homo sapiens cDNA FLJ38476 fis, clone FEBRA2022504, moderately similar to High-glucose-regulated protein 8 Length = 2967 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1654 cctcctcctcctcctggcgct 1634
>gb|AC107222.6| Homo sapiens BAC clone RP11-616K6 from 4, complete sequence Length = 111550 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 98537 cctcctcctcctcctggcgct 98517
>gb|AC090868.4| Homo sapiens chromosome 15, clone RP11-795G3, complete sequence Length = 183890 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gacttcctcctctccctctcc 328 ||||||||||||||||||||| Sbjct: 67361 gacttcctcctctccctctcc 67341
>gb|AC092800.2| Homo sapiens chromosome 1 clone RP11-25B7, complete sequence Length = 169405 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 46698 cccctcttcctcccctcccca 46718
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 314 ctcctctccctctccgccgcgccgcgcgc 342 |||||||||||| ||||| |||||||||| Sbjct: 9444674 ctcctctccctcaccgccacgccgcgcgc 9444702
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 cctctccgccgcgccgcgcgc 342 ||||||||||||||||||||| Sbjct: 19372333 cctctccgccgcgccgcgcgc 19372313
>gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-138H8, complete sequence Length = 172850 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gacttcctcctctccctctcc 328 ||||||||||||||||||||| Sbjct: 10974 gacttcctcctctccctctcc 10954
>dbj|AB164646.1| Oryza sativa (japonica cultivar-group) OsYSL2 mRNA for hypothetical protein, complete cds Length = 2025 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gcctcctcctcctcctggcgc 122 ||||||||||||||||||||| Sbjct: 292 gcctcctcctcctcctggcgc 312
>gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, complete sequence Length = 204674 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 tcatgttcctggtccagccccagcc 204 ||||||||||||| ||||||||||| Sbjct: 98998 tcatgttcctggtgcagccccagcc 99022
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 cctctccgccgcgccgcgcgc 342 ||||||||||||||||||||| Sbjct: 100338 cctctccgccgcgccgcgcgc 100318
>ref|NM_017798.2| Homo sapiens YTH domain family, member 1 (YTHDF1), mRNA Length = 3265 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1936 cctcctcctcctcctggcgct 1916
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 327 ccgccgcgccgcgcgcgtccccggcgccg 355 |||||||||||| |||||||||||||||| Sbjct: 109729 ccgccgcgccgc-cgcgtccccggcgccg 109756
>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0004F07 Length = 135890 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 314 ctcctctccctctccgccgcgccgcgcgc 342 |||||||||||| ||||| |||||||||| Sbjct: 115542 ctcctctccctcaccgccacgccgcgcgc 115570
>dbj|AB126253.1| Oryza sativa (japonica cultivar-group) OsYSL2 mRNA for YS1-like metal-nicotianamine transporter, complete cds Length = 2025 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gcctcctcctcctcctggcgc 122 ||||||||||||||||||||| Sbjct: 292 gcctcctcctcctcctggcgc 312
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1100H02 Length = 128773 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 314 ctcctctccctctccgccgcgccgcgcgc 342 |||||||||||| ||||| |||||||||| Sbjct: 26660 ctcctctccctcaccgccacgccgcgcgc 26688
>emb|BX004983.8| Zebrafish DNA sequence from clone DKEY-7F3, complete sequence Length = 234489 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 taaacccctcttcctcccctc 83 ||||||||||||||||||||| Sbjct: 219873 taaacccctcttcctcccctc 219893
>dbj|AK000398.1| Homo sapiens cDNA FLJ20391 fis, clone KAIA4640 Length = 2429 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1097 cctcctcctcctcctggcgct 1077
>emb|AJ251973.1|HSA251973 Homo sapiens partial steerin-1 gene Length = 200033 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 186720 cccctcttcctcccctcccca 186700
>gb|AC152831.2| Ornithorhynchus anatinus chromosome UNK clone OABb-168A1, complete sequence Length = 139370 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 39752 cccctcttcctcccctcccca 39772
>gb|AC166061.2| Mus musculus BAC clone RP23-177N16 from chromosome 14, complete sequence Length = 213071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 85293 cccctcttcctcccctcccca 85273
>emb|AL834366.1|HSM805436 Homo sapiens mRNA; cDNA DKFZp762G1112 (from clone DKFZp762G1112) Length = 2391 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1057 cctcctcctcctcctggcgct 1037
>dbj|AB055518.1| Homo sapiens DACA-1 mRNA for dermatomyositis associated with cancer putative autoantigen-1, partial cds Length = 2615 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgct 123 ||||||||||||||||||||| Sbjct: 1277 cctcctcctcctcctggcgct 1257
>gb|AC120880.8| Mus musculus chromosome 3, clone RP24-553A12, complete sequence Length = 147280 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116191 cccctcttcctcccctcccc 116210 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116169 cccctcttcctcccctcccc 116188 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116124 cccctcttcctcccctcccc 116143 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116079 cccctcttcctcccctcccc 116098 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116057 cccctcttcctcccctcccc 116076 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116035 cccctcttcctcccctcccc 116054 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116013 cccctcttcctcccctcccc 116032
>ref|NM_106348.3| Arabidopsis thaliana protein transporter AT1G76970 mRNA, complete cds Length = 1761 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 1258 agaagcctcctcctcctcct 1277
>gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, complete sequence Length = 164968 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 139643 cccctcttcctcccctcccc 139662
>gb|AC153580.19| Mus musculus 6 BAC RP23-389F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180936 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 120975 agaagcctcctcctcctcct 120994
>ref|XM_482822.1| Oryza sativa (japonica cultivar-group), mRNA Length = 785 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acttcctcctctccctctcc 328 |||||||||||||||||||| Sbjct: 86 acttcctcctctccctctcc 105
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ggcgccgtgctgcgcggcga 246 |||||||||||||||||||| Sbjct: 3038475 ggcgccgtgctgcgcggcga 3038456 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 acggcgccgtgctgcgcggcgaca 248 ||||||||| |||||||||||||| Sbjct: 1503777 acggcgccgcgctgcgcggcgaca 1503800
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cgagcacgaggaagctcatg 184 |||||||||||||||||||| Sbjct: 684304 cgagcacgaggaagctcatg 684323
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0086N07 map S790A, complete sequence Length = 178523 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ctccctctccgccgcgccgc 338 |||||||||||||||||||| Sbjct: 159822 ctccctctccgccgcgccgc 159803
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ctccctctccgccgcgccgc 338 |||||||||||||||||||| Sbjct: 96155 ctccctctccgccgcgccgc 96174
>ref|XM_580915.2| PREDICTED: Bos taurus similar to YTH domain family 1 (LOC538525), mRNA Length = 3464 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cctcctcctcctcctggcgc 122 |||||||||||||||||||| Sbjct: 2098 cctcctcctcctcctggcgc 2079
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cggcgccgtgctgcgcggcg 245 |||||||||||||||||||| Sbjct: 1914357 cggcgccgtgctgcgcggcg 1914338
>ref|XM_594476.2| PREDICTED: Bos taurus similar to CG5359-PA (LOC516323), mRNA Length = 660 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gcctcctcctcctcctggcg 121 |||||||||||||||||||| Sbjct: 47 gcctcctcctcctcctggcg 28
>gb|AC164640.4| Mus musculus BAC clone RP23-228M12 from chromosome 7, complete sequence Length = 232468 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 113655 cccctcttcctcccctcccc 113636
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cccggcgccgtccgtgtccc 365 |||||||||||||||||||| Sbjct: 84616 cccggcgccgtccgtgtccc 84597
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 gccgtcggcaagcacggcgccggc 433 ||||||||| |||||||||||||| Sbjct: 32822 gccgtcggcgagcacggcgccggc 32799
>ref|XM_843823.1| PREDICTED: Canis familiaris similar to Ig heavy chain V-III region VH26 precursor (LOC490891), mRNA Length = 747 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tccaccagctgtacctctcc 400 |||||||||||||||||||| Sbjct: 74 tccaccagctgtacctctcc 55
>ref|XM_843752.1| PREDICTED: Canis familiaris similar to Ig heavy chain V-III region VH26 precursor (LOC607155), mRNA Length = 480 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tccaccagctgtacctctcc 400 |||||||||||||||||||| Sbjct: 152 tccaccagctgtacctctcc 133
>ref|XM_843734.1| PREDICTED: Canis familiaris similar to Ig heavy chain V-III region VH26 precursor (LOC607133), mRNA Length = 657 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tccaccagctgtacctctcc 400 |||||||||||||||||||| Sbjct: 221 tccaccagctgtacctctcc 202
>emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chromosome 17, complete sequence Length = 205369 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 agcctcctcctcctcctggc 120 |||||||||||||||||||| Sbjct: 49227 agcctcctcctcctcctggc 49208
>gb|AC002291.1| Arabidopsis thaliana chromosome I BAC F22K20 genomic sequence, complete sequence Length = 96642 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 42120 agaagcctcctcctcctcct 42101
>gb|AC125171.4| Mus musculus BAC clone RP24-475M20 from chromosome 6, complete sequence Length = 167590 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 9742 cccctcttcctcccctcccc 9723
>gb|AC122845.4| Mus musculus BAC clone RP23-155G2 from 1, complete sequence Length = 215455 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 152502 cccctcttcctcccctcccc 152483
>gb|AC122829.4| Mus musculus BAC clone RP23-224F12 from 10, complete sequence Length = 155915 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 14466 cccctcttcctcccctcccc 14485 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 14443 cccctcttcctcccctcccc 14462
>gb|AC121601.4| Mus musculus BAC clone RP23-305F2 from 1, complete sequence Length = 190653 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 5235 agaagcctcctcctcctcct 5216
>emb|CR714669.2|CNS0GEE1 Tetraodon nigroviridis full-length cDNA Length = 1356 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgacttcctcctctccctct 326 |||||||||||||||||||| Sbjct: 987 cgacttcctcctctccctct 968
>emb|CR697998.2|CNS0G1IY Tetraodon nigroviridis full-length cDNA Length = 1785 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgacttcctcctctccctct 326 |||||||||||||||||||| Sbjct: 1408 cgacttcctcctctccctct 1389
>gb|AC116465.8| Mus musculus chromosome 10, clone RP23-64J3, complete sequence Length = 237801 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 97368 cccctcttcctcccctcccc 97387
>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence Length = 191999 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 67441 cccctcttcctcccctcccc 67460
>gb|BT010453.1| Arabidopsis thaliana At1g76970 mRNA, complete cds Length = 1341 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 1013 agaagcctcctcctcctcct 1032
>emb|AL121987.34|HSBA536C5 Human DNA sequence from clone RP11-536C5 on chromosome 1q23.1-24.1 Contains the 5' end of the KCNJ10 gene for potassium inwardly-rectifying channel subfamily J member 10, a novel gene, the KCNJ9 gene for potassium inwardly-rectifying channel subfamily J member 9, the IGSF8 gene for immunoglobulin superfamily member 8, the ATP1A2 gene for Na+/K+ transporting ATPase alpha 2 (+) polypeptide, the ATP1A4 gene for Na+/K+ transporting ATPase alpha 4 (+) polypeptide, the CASQ1 gene for calsequestrin 1 (fast-twitch, skeletal muscle), a novel gene, the PEA15 gene for phosphoprotein enriched in astrocytes 15 and four CpG islands, complete sequence Length = 170834 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 22065 cccctcttcctcccctcccc 22046
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 agagaagcctcctcctcctcctgg 119 |||||||| ||||||||||||||| Sbjct: 2019019 agagaagcgtcctcctcctcctgg 2018996
>emb|X58339.1| H.vulgare CHS gene for chalcone synthase Length = 5230 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cggcggcgcagaaggccatc 301 |||||||||||||||||||| Sbjct: 3627 cggcggcgcagaaggccatc 3646
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 agagaagcctcctcctcctcctgg 119 |||||||| ||||||||||||||| Sbjct: 109748 agagaagcgtcctcctcctcctgg 109725
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ctccctctccgccgcgccgc 338 |||||||||||||||||||| Sbjct: 6678 ctccctctccgccgcgccgc 6659
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ggcgccgtgctgcgcggcga 246 |||||||||||||||||||| Sbjct: 251900 ggcgccgtgctgcgcggcga 251881
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ggcgccgtgctgcgcggcga 246 |||||||||||||||||||| Sbjct: 173579 ggcgccgtgctgcgcggcga 173560
>emb|BX248359.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 6/8 Length = 349895 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 gcggcgacatccccgtctcc 259 |||||||||||||||||||| Sbjct: 269462 gcggcgacatccccgtctcc 269481
>emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the 5' end of the Slc36a3 gene for solute carrier family 36 (proton/amino acid symporter) member 3, two novel genes, the Tramd1 gene for tramdorin 1 (transmembrane domain rich protein), the Slc36a1 gene for solute carrier family 36 (proton/amino acid symporter) member 1 and the gene for the ortholog of human and rat FAT tumor suppressor homolog 2 (Drosophila) FAT2, complete sequence Length = 188782 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acttcctcctctccctctcc 328 |||||||||||||||||||| Sbjct: 134527 acttcctcctctccctctcc 134546
>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the 3' end of a novel gene (4933412J03Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the Tnfsf15 gene for tumor necrosis factor (ligand) superfamily member 15 and the 3' end of the Tnfsf8 for tumor necrosis factor (ligand) superfamily member 8, complete sequence Length = 212420 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 24487 cccctcttcctcccctcccc 24506
>emb|AJ245997.1|XCA245997 Xanthomonas campestris rpfD, ORF1, ORF2, ORF3, ORF4, recJ, rpfE and greA genes Length = 8165 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ctcctggcgctaatggcgct 132 |||||||||||||||||||| Sbjct: 2909 ctcctggcgctaatggcgct 2928
>gb|AC022825.9| Homo sapiens chromosome 8, clone RP11-88J22, complete sequence Length = 191772 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acttcctcctctccctctcc 328 |||||||||||||||||||| Sbjct: 70188 acttcctcctctccctctcc 70207
>gb|AE012287.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 195 of 460 of the complete genome Length = 12903 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ctcctggcgctaatggcgct 132 |||||||||||||||||||| Sbjct: 1975 ctcctggcgctaatggcgct 1956
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ctccctctccgccgcgccgc 338 |||||||||||||||||||| Sbjct: 116285 ctccctctccgccgcgccgc 116304
>gb|AC005906.1| Homo sapiens 12p13.3 BAC RPCI11-429A20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185952 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aacccctcttcctcccctcc 84 |||||||||||||||||||| Sbjct: 111968 aacccctcttcctcccctcc 111987
>gb|AC098487.1| Homo sapiens BAC clone RP11-499E18 from 4, complete sequence Length = 163914 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acttcctcctctccctctcc 328 |||||||||||||||||||| Sbjct: 119566 acttcctcctctccctctcc 119585
>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC Library) complete sequence Length = 148984 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 gaagcctcctcctcctcctg 118 |||||||||||||||||||| Sbjct: 76647 gaagcctcctcctcctcctg 76666
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gcgccgtgctgcgcggcgac 247 |||||||||||||||||||| Sbjct: 3300966 gcgccgtgctgcgcggcgac 3300947
>gb|AC151895.4| Mus musculus BAC clone RP24-323A22 from chromosome 10, complete sequence Length = 224442 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 caaatggccaagagaagcctcctc 109 |||||||||||||||||| ||||| Sbjct: 146666 caaatggccaagagaagcttcctc 146689
>dbj|AK221351.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-27-C03 Length = 1605 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 1130 agaagcctcctcctcctcct 1149
>dbj|AK046893.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930001F21 product:unclassifiable, full insert sequence Length = 2944 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 agagaagcctcctcctcctcctgg 119 |||| ||||||||||||||||||| Sbjct: 870 agagcagcctcctcctcctcctgg 893
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ctcctggcgctaatggcgct 132 |||||||||||||||||||| Sbjct: 2830548 ctcctggcgctaatggcgct 2830567
>dbj|AK018569.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030623N16 product:hypothetical protein, full insert sequence Length = 1594 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ccaaatggccaagagaagcc 104 |||||||||||||||||||| Sbjct: 1359 ccaaatggccaagagaagcc 1340
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ctccctctccgccgcgccgc 338 |||||||||||||||||||| Sbjct: 6678 ctccctctccgccgcgccgc 6659
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ctcctctccctctccgccgc 333 |||||||||||||||||||| Sbjct: 25305133 ctcctctccctctccgccgc 25305152
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 agagaagcctcctcctcctcctgg 119 |||||||| ||||||||||||||| Sbjct: 2019019 agagaagcgtcctcctcctcctgg 2018996
>emb|BX816654.1|CNS0ADCS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 529 agaagcctcctcctcctcct 548
>emb|BX815173.1|CNS0ACTE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1497 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 1062 agaagcctcctcctcctcct 1081
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete sequence Length = 180092 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 agagaagcctcctcctcctcctgg 119 |||| ||||||||||||||||||| Sbjct: 89960 agagcagcctcctcctcctcctgg 89937
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gttcctggtccagccccagc 203 |||||||||||||||||||| Sbjct: 6750090 gttcctggtccagccccagc 6750071
>gb|AC012493.9| Homo sapiens BAC clone RP11-292K15 from 2, complete sequence Length = 170404 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ccgcgcgcgtccccggcgccgtcc 358 ||||||||||||||| |||||||| Sbjct: 126758 ccgcgcgcgtccccgccgccgtcc 126781
>gb|AC027242.16| Homo sapiens chromosome 8, clone RP11-678P19, complete sequence Length = 101400 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acttcctcctctccctctcc 328 |||||||||||||||||||| Sbjct: 100521 acttcctcctctccctctcc 100540
>gb|AC073610.17| Homo sapiens 12 BAC RP11-302B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104593 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 92127 agaagcctcctcctcctcct 92146
>ref|XM_578691.1| PREDICTED: Rattus norvegicus similar to Peptidylprolyl isomerase A, isoform 1 (LOC503167), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ggccatcgtctccgacttcc 314 |||||||||||||||||||| Sbjct: 540 ggccatcgtctccgacttcc 521
>gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome unknown, complete sequence Length = 239189 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 caagatctaaacccctcttc 75 |||||||||||||||||||| Sbjct: 75311 caagatctaaacccctcttc 75330
>emb|BX546504.9| Mouse DNA sequence from clone RP23-78N22 on chromosome X, complete sequence Length = 107447 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 caagatctaaacccctcttc 75 |||||||||||||||||||| Sbjct: 26448 caagatctaaacccctcttc 26467
>gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174195 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 164682 cccctcttcctcccctcccc 164701 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 164659 cccctcttcctcccctcccc 164678
>gb|AY943953.1| Streptomyces sp. FQ1 plasmid pFP1, complete sequence Length = 39360 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgtgctgcgcggcgacatcc 251 |||||||||||||||||||| Sbjct: 37909 cgtgctgcgcggcgacatcc 37928
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acttcctcctctccctctcc 328 |||||||||||||||||||| Sbjct: 92461 acttcctcctctccctctcc 92480
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acttcctcctctccctctcc 328 |||||||||||||||||||| Sbjct: 134613 acttcctcctctccctctcc 134632
>dbj|AK120178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033H06, full insert sequence Length = 785 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acttcctcctctccctctcc 328 |||||||||||||||||||| Sbjct: 86 acttcctcctctccctctcc 105
>dbj|AK110125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-B11, full insert sequence Length = 3706 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gcctcctcctcctcctggcg 121 |||||||||||||||||||| Sbjct: 1460 gcctcctcctcctcctggcg 1441
>gb|AC155726.4| Mus musculus 6 BAC RP24-180C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 187560 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 145731 cccctcttcctcccctcccc 145712
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ccgccgcgccgcgcgcgtcc 346 |||||||||||||||||||| Sbjct: 621788 ccgccgcgccgcgcgcgtcc 621807
>gb|AC122197.4| Mus musculus BAC clone RP23-55A6 from 10, complete sequence Length = 232763 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 caaatggccaagagaagcctcctc 109 |||||||||||||||||| ||||| Sbjct: 197614 caaatggccaagagaagcttcctc 197591
>emb|BX936328.7| Zebrafish DNA sequence from clone CH211-11F20 in linkage group 18, complete sequence Length = 113038 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cttcctcctctccctctccg 329 |||||||||||||||||||| Sbjct: 5334 cttcctcctctccctctccg 5315
>gb|AY108210.1| Zea mays PCO096605 mRNA sequence Length = 1795 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 cgtccccggcgccgtccgtg 361 |||||||||||||||||||| Sbjct: 610 cgtccccggcgccgtccgtg 629
>gb|AC113207.8| Mus musculus chromosome 10, clone RP23-323O18, complete sequence Length = 237187 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 8880 cccctcttcctcccctcccc 8899
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 acggcgccgtgctgcgcggcgaca 248 ||||||||| |||||||||||||| Sbjct: 2891999 acggcgccgcgctgcgcggcgaca 2892022
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 agagaagcctcctcctcctcctgg 119 |||||||| ||||||||||||||| Sbjct: 2018970 agagaagcgtcctcctcctcctgg 2018947
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ctcctctccctctccgccgc 333 |||||||||||||||||||| Sbjct: 25233309 ctcctctccctctccgccgc 25233328
>emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chromosome 2, complete sequence Length = 229583 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 ccaaatggccaagagaagcc 104 |||||||||||||||||||| Sbjct: 181354 ccaaatggccaagagaagcc 181373
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ctcctctccctctccgccgc 333 |||||||||||||||||||| Sbjct: 32057 ctcctctccctctccgccgc 32038
>gb|AC144858.3| Mus musculus BAC clone RP24-144F3 from 8, complete sequence Length = 185158 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 135850 agaagcctcctcctcctcct 135831
>gb|AC140553.3| Mus musculus BAC clone RP24-71M17 from 1, complete sequence Length = 217538 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 57979 cccctcttcctcccctcccc 57960
>gb|AC134327.2| Mus musculus BAC clone RP24-270O22 from 1, complete sequence Length = 152697 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 133159 agaagcctcctcctcctcct 133140
>ref|NM_025777.1| Mus musculus RIKEN cDNA 9030623N16 gene (9030623N16Rik), mRNA Length = 1594 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ccaaatggccaagagaagcc 104 |||||||||||||||||||| Sbjct: 1359 ccaaatggccaagagaagcc 1340
>gb|AC025256.33| Homo sapiens 12 BAC RP11-437F8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 53829 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 agaagcctcctcctcctcct 117 |||||||||||||||||||| Sbjct: 12453 agaagcctcctcctcctcct 12434
>dbj|AP003159.1| Homo sapiens genomic DNA, chromosome 1p36 clone:1024F16, complete sequence Length = 113733 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 tgttcctggtccagccccag 202 |||||||||||||||||||| Sbjct: 91644 tgttcctggtccagccccag 91663 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,335,531 Number of Sequences: 3902068 Number of extensions: 5335531 Number of successful extensions: 499191 Number of sequences better than 10.0: 166 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 492080 Number of HSP's gapped (non-prelim): 7105 length of query: 438 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 416 effective length of database: 17,147,199,772 effective search space: 7133235105152 effective search space used: 7133235105152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
