ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X84056.1|HVPAF93 H.vulgare paf93 gene 186 2e-44
2gb|AF043093.1|AF043093 Hordeum vulgare dehydrin 8 (dhn8) gene, c... 186 2e-44
3gb|AF181458.1|AF181458 Hordeum vulgare dehydrin (Dhn8) mRNA, com... 184 8e-44
4emb|AJ890140.1| Triticum turgidum subsp. durum mRNA for dehydrin... 133 3e-28
5gb|L19419.1|LHPESI Lophopyrum elongatum ES135 mRNA sequence 133 3e-28
6gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein ... 133 3e-28
7gb|U73210.1|TAU73210 Triticum aestivum cold acclimation protein ... 133 3e-28
8gb|L29152.1|WHTWCOR Triticum aestivum cold acclimation protein (... 133 3e-28
9gb|AY587109.1| Oryza sativa (japonica cultivar-group) dehydratio... 70 3e-09
10gb|AY786415.1| Oryza sativa (japonica cultivar-group) SK3-type d... 70 3e-09
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 3e-09
12dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 70 3e-09
13dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic D... 70 3e-09
14dbj|AK070197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 3e-09
15ref|XM_504089.1| Yarrowia lipolytica CLIB122, YALI0E18051g predi... 44 0.19
16emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 44 0.19
17ref|XM_586828.2| PREDICTED: Bos taurus similar to Fas apoptotic ... 42 0.76
18gb|BC116167.1| Bos taurus cDNA clone MGC:140638 IMAGE:8272683, c... 42 0.76
19dbj|AK144138.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full... 42 0.76
20gb|L35913.1|MZELIPASE Zea mays dehydrin (dhn-2) mRNA, complete cds 42 0.76
21gb|AY111114.1| Zea mays CL2452_1 mRNA sequence 42 0.76
22gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
23gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, compl... 40 3.0
24dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
25emb|BX470156.7| Mouse DNA sequence from clone RP23-2L1 on chromo... 40 3.0 
>emb|X84056.1|HVPAF93 H.vulgare paf93 gene
          Length = 1154

 Score =  186 bits (94), Expect = 2e-44
 Identities = 100/102 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatctcgatcatggaggatgagagtagcacccagtcataccagggagctgaggcccatca 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 86  gatctcgatcatggaggatgagaggagcacccagtcataccagggagctgaggccgatca 145

                                                     
Query: 61  ggtggaggtgacggacaggggcctactcggcaacctcctcgg 102
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ggtggaggtgacggacaggggcctactcggcaacctcctcgg 187



 Score =  184 bits (93), Expect = 8e-44
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                       
Query: 143 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggaggatggcgag 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggaggatggcgag 287

                                            
Query: 203 aagaaggagactctcttctccaagctgcaccga 235
           |||||||||||||||||||||||||||||||||
Sbjct: 288 aagaaggagactctcttctccaagctgcaccga 320
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>gb|AF043093.1|AF043093 Hordeum vulgare dehydrin 8 (dhn8) gene, complete cds
          Length = 2254

 Score =  186 bits (94), Expect = 2e-44
 Identities = 100/102 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    gatctcgatcatggaggatgagagtagcacccagtcataccagggagctgaggcccatca 60
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1264 gatctcgatcatggaggatgagaggagcacccagtcataccagggagctgaggccgatca 1323

                                                      
Query: 61   ggtggaggtgacggacaggggcctactcggcaacctcctcgg 102
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 ggtggaggtgacggacaggggcctactcggcaacctcctcgg 1365



 Score =  184 bits (93), Expect = 8e-44
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                        
Query: 143  ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggaggatggcgag 202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggaggatggcgag 1465

                                             
Query: 203  aagaaggagactctcttctccaagctgcaccga 235
            |||||||||||||||||||||||||||||||||
Sbjct: 1466 aagaaggagactctcttctccaagctgcaccga 1498
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>gb|AF181458.1|AF181458 Hordeum vulgare dehydrin (Dhn8) mRNA, complete cds
          Length = 808

 Score =  184 bits (93), Expect = 8e-44
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                       
Query: 143 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggaggatggcgag 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggaggatggcgag 194

                                            
Query: 203 aagaaggagactctcttctccaagctgcaccga 235
           |||||||||||||||||||||||||||||||||
Sbjct: 195 aagaaggagactctcttctccaagctgcaccga 227



 Score =  163 bits (82), Expect = 3e-37
 Identities = 91/94 (96%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcatggaggatgagagtagcacccagtcataccagggagctgaggcccatcaggtggagg 68
           |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1   tcatggaggatgagaggagcacccagtcataccagggagctgaggccgatcaggtggagg 60

                                             
Query: 69  tgacggacaggggcctactcggcaacctcctcgg 102
            |||||||||||||||||||||||||||||||||
Sbjct: 61  cgacggacaggggcctactcggcaacctcctcgg 94
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>emb|AJ890140.1| Triticum turgidum subsp. durum mRNA for dehydrin (dhn11 gene)
          Length = 1127

 Score =  133 bits (67), Expect = 3e-28
 Identities = 96/105 (91%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatctcgatcatggaggatgagagtagcacccagtcataccagggagctgaggccc---a 57
           |||||||||||||||||||||||| |||||||||||||||||||||| |||||||    |
Sbjct: 80  gatctcgatcatggaggatgagaggagcacccagtcataccagggaggtgaggccgccga 139

                                                        
Query: 58  tcaggtggaggtgacggacaggggcctactcggcaacctcctcgg 102
            |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 140 gcaggtggaggtgacagacaggggcctcctcggcaacctcctcgg 184



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                
Query: 143 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggagga 195
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 225 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaagaagga 277



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 44/45 (97%)
 Strand = Plus / Plus

                                                        
Query: 191 gaggatggcgagaagaaggagactctcttctccaagctgcaccga 235
           ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 285 gaggatggcgagaagaaggagaccctcttctccaagctgcaccga 329
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>gb|L19419.1|LHPESI Lophopyrum elongatum ES135 mRNA sequence
          Length = 1130

 Score =  133 bits (67), Expect = 3e-28
 Identities = 96/105 (91%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatctcgatcatggaggatgagagtagcacccagtcataccagggagctgaggccc---a 57
           |||||||||||||||||||||||| |||||||||||||||||||||| |||||||    |
Sbjct: 76  gatctcgatcatggaggatgagaggagcacccagtcataccagggaggtgaggccgccga 135

                                                        
Query: 58  tcaggtggaggtgacggacaggggcctactcggcaacctcctcgg 102
            ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 136 gcaggtggaggtgacggataggggcctcctcggcaacctcctcgg 180



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                
Query: 143 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggagga 195
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 221 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaagaagga 273



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 44/45 (97%)
 Strand = Plus / Plus

                                                        
Query: 191 gaggatggcgagaagaaggagactctcttctccaagctgcaccga 235
           ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 281 gaggatggcgagaagaaggagaccctcttctccaagctgcaccga 325
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>gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein WCOR410c (Wcor410c)
           mRNA, complete cds
          Length = 1242

 Score =  133 bits (67), Expect = 3e-28
 Identities = 96/105 (91%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatctcgatcatggaggatgagagtagcacccagtcataccagggagctgaggccc---a 57
           |||||||||||||||||||||||| |||||||||||||||||||||| |||||||    |
Sbjct: 86  gatctcgatcatggaggatgagaggagcacccagtcataccagggaggtgaggccgccga 145

                                                        
Query: 58  tcaggtggaggtgacggacaggggcctactcggcaacctcctcgg 102
            |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 146 gcaggtggaggtgacagacaggggcctcctcggcaacctcctcgg 190



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                
Query: 143 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggagga 195
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 231 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaagaagga 283



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 44/45 (97%)
 Strand = Plus / Plus

                                                        
Query: 191 gaggatggcgagaagaaggagactctcttctccaagctgcaccga 235
           ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 291 gaggatggcgagaagaaggagaccctcttctccaagctgcaccga 335
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>gb|U73210.1|TAU73210 Triticum aestivum cold acclimation protein WCOR410b (Wcor410b)
           mRNA, complete cds
          Length = 1181

 Score =  133 bits (67), Expect = 3e-28
 Identities = 96/105 (91%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatctcgatcatggaggatgagagtagcacccagtcataccagggagctgaggccc---a 57
           |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    |
Sbjct: 68  gatctcgatcatggaggatgagaggagcacccagtcgtaccagggaggtgaggccgccga 127

                                                        
Query: 58  tcaggtggaggtgacggacaggggcctactcggcaacctcctcgg 102
            |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 128 gcaggtggaggtgacggacaggggcctcctcggcaacctcctcgg 172



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                
Query: 143 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggagga 195
           |||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 216 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggtcaagaagga 268



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                      
Query: 193 ggatggcgagaagaaggagactctcttctccaagctgcaccga 235
           ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 278 ggatggcgagaagaaggagaccctcttctccaagctgcaccga 320
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>gb|L29152.1|WHTWCOR Triticum aestivum cold acclimation protein (WCOR410) mRNA, complete
           cds
          Length = 1136

 Score =  133 bits (67), Expect = 3e-28
 Identities = 96/105 (91%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatctcgatcatggaggatgagagtagcacccagtcataccagggagctgaggccc---a 57
           |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    |
Sbjct: 77  gatctcgatcatggaggatgagaggagcacccagtcgtaccagggaggtgaggccgccga 136

                                                        
Query: 58  tcaggtggaggtgacggacaggggcctactcggcaacctcctcgg 102
            |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 137 gcaggtggaggtgacggacaggggcctcctcggcaacctcctcgg 181



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                
Query: 143 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggttaaggagga 195
           |||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 222 ctggtcaccggcatggagaaggtctccgtggaagagcccgaggtcaagaagga 274



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 44/45 (97%)
 Strand = Plus / Plus

                                                        
Query: 191 gaggatggcgagaagaaggagactctcttctccaagctgcaccga 235
           ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 282 gaggatggcgagaagaaggagaccctcttctccaagctgcaccga 326
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>gb|AY587109.1| Oryza sativa (japonica cultivar-group) dehydration-stress inducible
           protein 1 mRNA, complete cds
          Length = 1315

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 146 gtcaccggcatggagaaggtctccgtggaagagcc 180
           |||||||||||||||||||||||||||||||||||
Sbjct: 253 gtcaccggcatggagaaggtctccgtggaagagcc 287



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 197 ggcgagaagaaggagactctcttctccaagctgcaccga 235
           ||||||||||||||||  ||| |||||||||||||||||
Sbjct: 313 ggcgagaagaaggagagcctcctctccaagctgcaccga 351



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 59  caggtggaggtgacggacaggggcctactcggcaacctcct 99
           ||||||||||||| ||||||||||||  ||| |||||||||
Sbjct: 160 caggtggaggtgaaggacaggggcctcttcgacaacctcct 200



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   tcgatcatggaggatgagag 24
           ||||||||||||||||||||
Sbjct: 103 tcgatcatggaggatgagag 122
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>gb|AY786415.1| Oryza sativa (japonica cultivar-group) SK3-type dehydrin 1 (Dhn1)
           mRNA, complete cds
          Length = 1117

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 146 gtcaccggcatggagaaggtctccgtggaagagcc 180
           |||||||||||||||||||||||||||||||||||
Sbjct: 243 gtcaccggcatggagaaggtctccgtggaagagcc 277



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 197 ggcgagaagaaggagactctcttctccaagctgcaccga 235
           ||||||||||||||||  ||| |||||||||||||||||
Sbjct: 303 ggcgagaagaaggagagcctcctctccaagctgcaccga 341



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 59  caggtggaggtgacggacaggggcctactcggcaacctcct 99
           ||||||||||||| ||||||||||||  ||| |||||||||
Sbjct: 150 caggtggaggtgaaggacaggggcctcttcgacaacctcct 190



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   tcgatcatggaggatgagag 24
           ||||||||||||||||||||
Sbjct: 93  tcgatcatggaggatgagag 112
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                                   
Query: 146      gtcaccggcatggagaaggtctccgtggaagagcc 180
                |||||||||||||||||||||||||||||||||||
Sbjct: 27185128 gtcaccggcatggagaaggtctccgtggaagagcc 27185094



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 197      ggcgagaagaaggagactctcttctccaagctgcaccga 235
                ||||||||||||||||  ||| |||||||||||||||||
Sbjct: 27185068 ggcgagaagaaggagagcctcctctccaagctgcaccga 27185030



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 59       caggtggaggtgacggacaggggcctactcggcaacctcct 99
                ||||||||||||| ||||||||||||  ||| |||||||||
Sbjct: 27185221 caggtggaggtgaaggacaggggcctcttcgacaacctcct 27185181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 5        tcgatcatggaggatgagag 24
                ||||||||||||||||||||
Sbjct: 27185278 tcgatcatggaggatgagag 27185259
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>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                                
Query: 146   gtcaccggcatggagaaggtctccgtggaagagcc 180
             |||||||||||||||||||||||||||||||||||
Sbjct: 81577 gtcaccggcatggagaaggtctccgtggaagagcc 81543



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 197   ggcgagaagaaggagactctcttctccaagctgcaccga 235
             ||||||||||||||||  ||| |||||||||||||||||
Sbjct: 81517 ggcgagaagaaggagagcctcctctccaagctgcaccga 81479



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 59    caggtggaggtgacggacaggggcctactcggcaacctcct 99
             ||||||||||||| ||||||||||||  ||| |||||||||
Sbjct: 81670 caggtggaggtgaaggacaggggcctcttcgacaacctcct 81630



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     tcgatcatggaggatgagag 24
             ||||||||||||||||||||
Sbjct: 81727 tcgatcatggaggatgagag 81708
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>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684A08
          Length = 137841

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                                
Query: 146   gtcaccggcatggagaaggtctccgtggaagagcc 180
             |||||||||||||||||||||||||||||||||||
Sbjct: 35799 gtcaccggcatggagaaggtctccgtggaagagcc 35765



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 197   ggcgagaagaaggagactctcttctccaagctgcaccga 235
             ||||||||||||||||  ||| |||||||||||||||||
Sbjct: 35739 ggcgagaagaaggagagcctcctctccaagctgcaccga 35701



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 59    caggtggaggtgacggacaggggcctactcggcaacctcct 99
             ||||||||||||| ||||||||||||  ||| |||||||||
Sbjct: 35892 caggtggaggtgaaggacaggggcctcttcgacaacctcct 35852



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     tcgatcatggaggatgagag 24
             ||||||||||||||||||||
Sbjct: 35949 tcgatcatggaggatgagag 35930
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>dbj|AK070197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N13, full
           insert sequence
          Length = 1292

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 146 gtcaccggcatggagaaggtctccgtggaagagcc 180
           |||||||||||||||||||||||||||||||||||
Sbjct: 265 gtcaccggcatggagaaggtctccgtggaagagcc 299



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 197 ggcgagaagaaggagactctcttctccaagctgcaccga 235
           ||||||||||||||||  ||| |||||||||||||||||
Sbjct: 325 ggcgagaagaaggagagcctcctctccaagctgcaccga 363



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 59  caggtggaggtgacggacaggggcctactcggcaacctcct 99
           ||||||||||||| ||||||||||||  ||| |||||||||
Sbjct: 172 caggtggaggtgaaggacaggggcctcttcgacaacctcct 212



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   tcgatcatggaggatgagag 24
           ||||||||||||||||||||
Sbjct: 115 tcgatcatggaggatgagag 134
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>ref|XM_504089.1| Yarrowia lipolytica CLIB122, YALI0E18051g predicted mRNA
          Length = 816

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 193 ggatggcgagaagaaggagact 214
           ||||||||||||||||||||||
Sbjct: 195 ggatggcgagaagaaggagact 216
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 193     ggatggcgagaagaaggagact 214
               ||||||||||||||||||||||
Sbjct: 2131609 ggatggcgagaagaaggagact 2131630
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>ref|XM_586828.2| PREDICTED: Bos taurus similar to Fas apoptotic inhibitory molecule
           2 (LOC509790), mRNA
          Length = 1228

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 195 atggcgagaagaaggagactc 215
           |||||||||||||||||||||
Sbjct: 210 atggcgagaagaaggagactc 230
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>gb|BC116167.1| Bos taurus cDNA clone MGC:140638 IMAGE:8272683, complete cds
          Length = 1171

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 195 atggcgagaagaaggagactc 215
           |||||||||||||||||||||
Sbjct: 161 atggcgagaagaaggagactc 181
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>dbj|AK144138.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched
           library, clone:G430034I10 product:Hypothetical G-protein
           beta WD-40 repeats containing protein, full insert
           sequence
          Length = 3724

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 188 aaggaggatggcgagaagaag 208
           |||||||||||||||||||||
Sbjct: 791 aaggaggatggcgagaagaag 811
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>gb|L35913.1|MZELIPASE Zea mays dehydrin (dhn-2) mRNA, complete cds
          Length = 1277

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 6  cgatcatggaggatgagagtagcacccag 34
          ||||||||||||||||||| | |||||||
Sbjct: 46 cgatcatggaggatgagaggaacacccag 74
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>gb|AY111114.1| Zea mays CL2452_1 mRNA sequence
          Length = 1256

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 6  cgatcatggaggatgagagtagcacccag 34
          ||||||||||||||||||| | |||||||
Sbjct: 46 cgatcatggaggatgagaggaacacccag 74
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>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15,
              complete sequence
          Length = 184316

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 188    aaggaggatggcgagaagaaggag 211
              |||||||||||||||| |||||||
Sbjct: 156585 aaggaggatggcgagaggaaggag 156562
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>gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, complete sequence
          Length = 186563

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   aaggagactctcttctccaa 225
             ||||||||||||||||||||
Sbjct: 82950 aaggagactctcttctccaa 82969
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 188     aaggaggatggcgagaagaaggag 211
               |||||||||||||||| |||||||
Sbjct: 7031662 aaggaggatggcgagaggaaggag 7031639
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>emb|BX470156.7| Mouse DNA sequence from clone RP23-2L1 on chromosome 2, complete
            sequence
          Length = 46782

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   aggatgagagtagcacccag 34
            ||||||||||||||||||||
Sbjct: 9078 aggatgagagtagcacccag 9097


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,460,063
Number of Sequences: 3902068
Number of extensions: 1460063
Number of successful extensions: 27933
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27834
Number of HSP's gapped (non-prelim): 99
length of query: 235
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 213
effective length of database: 17,147,199,772
effective search space: 3652353551436
effective search space used: 3652353551436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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