ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50a11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FUT3_BOVIN (Q11126) Galactoside 3(4)-L-fucosyltransferase (EC 2.... 28 9.5
2CYSP_SCHMA (P25792) Cathepsin B-like cysteine proteinase precurs... 28 9.5

>FUT3_BOVIN (Q11126) Galactoside 3(4)-L-fucosyltransferase (EC 2.4.1.65) (Blood|
           group Lewis alpha-4-fucosyltransferase) (Lewis FT)
           (Fucosyltransferase 3) (FUCT-III) (FUTB)
          Length = 365

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 8   SYRRSTTIPTPDGRLDTTPTSPITLLSNLS 97
           SYRR + I  P G L+  P+ P+  L N+S
Sbjct: 162 SYRRDSDIFMPYGWLEPWPSQPVETLLNIS 191



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>CYSP_SCHMA (P25792) Cathepsin B-like cysteine proteinase precursor (EC|
          3.4.22.-) (Antigen Sm31)
          Length = 340

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 7  IIQTVNNHPNAGWTA 51
          II  +N HPNAGW A
Sbjct: 33 IISYINEHPNAGWRA 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.133    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,326,646
Number of Sequences: 219361
Number of extensions: 152127
Number of successful extensions: 691
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 80,573,946
effective HSP length: 9
effective length of database: 78,599,697
effective search space used: 1886392728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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