>NUO6_SOLTU (P80729) NADH-ubiquinone oxidoreductase 11 kDa subunit (EC 1.6.5.3)|
           (EC 1.6.99.3) (Complex I-11KD) (CI-11KD) (Fragment)
          Length = 19

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +1

Query: 82  GFIMEFAENLILRLMEDPE 138
           GFIMEFAENLILR MEDP+
Sbjct: 1   GFIMEFAENLILRRMEDPK 19

>DRE2B_ARATH (O82133) Dehydration-responsive element-binding protein 2B (DREB2B|
           protein)
          Length = 330

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 88  IMEFAENLILRLMEDPEQRDEAQRAHVYRMKERCERTKAAWALPLRPYGF-WTFDRFNSQ 264
           ++EF +    +++++ E+  + +     + +E+ ++      L +  YG+ W+ D  N Q
Sbjct: 211 LLEFEQQYWGQVLQEKEKPKQEEEEIQQQQQEQQQQQLQPDLLTVADYGWPWSNDIVNDQ 270

Query: 265 LSWDP 279
            SWDP
Sbjct: 271 TSWDP 275

>HN_SENDO (Q88261) Hemagglutinin-neuraminidase (EC 3.2.1.18) (HN protein)|
           (HANA protein)
          Length = 575

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = +1

Query: 112 ILRLMEDPEQRDEAQRAHVYRMKERCERT----KAAWALPLRPYGFWTFDRFNSQLSWDP 279
           ++RL+E    R E        + + C+ T     A    PL P+ FW        LS DP
Sbjct: 121 VIRLIEKSCNRQE--------LTQLCDSTIAVHHAEGIAPLEPHSFWRCPAGEPYLSSDP 172

Query: 280 QISQAAG 300
           ++S   G
Sbjct: 173 EVSLLPG 179

>RL24_PRUAV (Q9FUL4) 60S ribosomal protein L24|
          Length = 186

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 118 RLMEDPEQRDEAQRAHVYRMKERCERTK 201
           R  E PE RD A+ A +  +KER ++TK
Sbjct: 96  RRTEKPEVRDAAREAALREIKERIKKTK 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,417,504
Number of Sequences: 219361
Number of extensions: 305803
Number of successful extensions: 825
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)