ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genom... 365 7e-98
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 365 7e-98
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 365 7e-98
4dbj|AK062981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 7e-98
5gb|AY106192.1| Zea mays PCO072441 mRNA sequence 283 2e-73
6gb|BT016356.1| Zea mays clone Contig189 mRNA sequence 268 1e-68
7gb|AY389672.1| Hyacinthus orientalis unknown mRNA 131 2e-27
8gb|AY389729.1| Hyacinthus orientalis At1g67350-like protein mRNA... 131 2e-27
9gb|AY389726.1| Hyacinthus orientalis unknown mRNA 119 7e-24
10gb|AF366446.1|AF366446 Allium cepa clone AGF125 maintainer line ... 50 0.006
11gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 48 0.022
12dbj|AB189463.1| Rhodobacter sphaeroides f. sp. denitrificans tre... 48 0.022
13emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 46 0.086
14gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 42 1.3
15gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.3
16emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 42 1.3
17emb|BX470121.7| Zebrafish DNA sequence from clone DKEY-267G17 in... 42 1.3
18gb|AC116993.2| Homo sapiens chromosome 1 clone RP4-561P1, comple... 42 1.3
19gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto... 42 1.3
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.3
21ref|XM_310742.2| Anopheles gambiae str. PEST ENSANGP00000010052 ... 42 1.3
22ref|XM_524448.1| PREDICTED: Pan troglodytes zinc finger, SWIM do... 40 5.3
23gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.3
24ref|XM_882793.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 5.3
25gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.3
26ref|NM_023072.1| Homo sapiens zinc finger, SWIM-type containing ... 40 5.3
27gb|AC149058.7| Mus musculus BAC clone RP23-338G5 from chromosome... 40 5.3
28gb|AC124574.4| Mus musculus BAC clone RP23-160J13 from 7, comple... 40 5.3
29gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 5.3
30emb|AL031259.1|HS191N21 Human DNA sequence from clone RP1-191N21... 40 5.3
31emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.3
32emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 5.3
33emb|AL009188.1|DMC165H7 Drosophila melanogaster cosmid clone 165H7 40 5.3
34gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.3
35gb|AC105774.8| Drosophila melanogaster X BAC RP98-8O5 (Roswell P... 40 5.3
36dbj|AK022283.1| Homo sapiens cDNA FLJ12221 fis, clone MAMMA1001091 40 5.3
37gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, comp... 40 5.3
38gb|BC102654.1| Bos taurus cDNA clone IMAGE:7956015, partial cds 40 5.3
39dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.3
40gb|AF263012.1|AF263011S2 Streptomyces griseus subsp. griseus mac... 40 5.3
41dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 5.3
42dbj|AK024452.1| Homo sapiens mRNA for FLJ00044 protein, partial cds 40 5.3
43gb|AE003417.4| Drosophila melanogaster chromosome X, section 1 o... 40 5.3
44gb|AY772007.1| Nocardioides sp. JS614 putative PAPS reductase ge... 40 5.3
45gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.3
46gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 5.3
47gb|AY675212.1| Oryzias latipes hypothetical protein mRNA, partia... 40 5.3
48emb|Y10684.1|HSTBPGENE H.sapiens tbp gene, promoter region 40 5.3
49dbj|D14668.1|HUMHC5 Human gene for proteasome HC5, 5'-flanking r... 40 5.3 
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete
              sequence
          Length = 121849

 Score =  365 bits (184), Expect = 7e-98
 Identities = 235/252 (93%)
 Strand = Plus / Minus

                                                                          
Query: 76     gggatgggattcatcatggagttcgcggagaacctgatcctgcggctgatggaggacccg 135
              |||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 105296 gggatgggtttcgtgatggagttcgcggagaacctgatcctgcggatgatggaggacccg 105237

                                                                          
Query: 136    gagcagcgggacgaggcgcagcgggcgcacgtctaccggatgaaggagcggtgcgagcgc 195
              | | ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 105236 gggaagcgggacgcggcgcagcgggagcacgtgtaccggatgaaggagcggtgcgagcgc 105177

                                                                          
Query: 196    accaaggcggcctgggcgctcccgctccgcccctacggcttctggaccttcgaccgcttc 255
              ||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105176 accaaggcggcgtggagcctcccgctccgcccctacggcttctggaccttcgaccgcttc 105117

                                                                          
Query: 256    aactcccagctctcctgggacccccagatcagccaggccgccggccgccgcgacccctac 315
              |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||
Sbjct: 105116 aactcccagctctcctgggatccccagatcagccacgcccccggccgccgcgacccctac 105057

                          
Query: 316    gacgacctcctc 327
              |||||| |||||
Sbjct: 105056 gacgacgtcctc 105045
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  365 bits (184), Expect = 7e-98
 Identities = 235/252 (93%)
 Strand = Plus / Plus

                                                                            
Query: 76       gggatgggattcatcatggagttcgcggagaacctgatcctgcggctgatggaggacccg 135
                |||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 27073595 gggatgggtttcgtgatggagttcgcggagaacctgatcctgcggatgatggaggacccg 27073654

                                                                            
Query: 136      gagcagcgggacgaggcgcagcgggcgcacgtctaccggatgaaggagcggtgcgagcgc 195
                | | ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 27073655 gggaagcgggacgcggcgcagcgggagcacgtgtaccggatgaaggagcggtgcgagcgc 27073714

                                                                            
Query: 196      accaaggcggcctgggcgctcccgctccgcccctacggcttctggaccttcgaccgcttc 255
                ||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27073715 accaaggcggcgtggagcctcccgctccgcccctacggcttctggaccttcgaccgcttc 27073774

                                                                            
Query: 256      aactcccagctctcctgggacccccagatcagccaggccgccggccgccgcgacccctac 315
                |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||
Sbjct: 27073775 aactcccagctctcctgggatccccagatcagccacgcccccggccgccgcgacccctac 27073834

                            
Query: 316      gacgacctcctc 327
                |||||| |||||
Sbjct: 27073835 gacgacgtcctc 27073846
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  365 bits (184), Expect = 7e-98
 Identities = 235/252 (93%)
 Strand = Plus / Plus

                                                                            
Query: 76       gggatgggattcatcatggagttcgcggagaacctgatcctgcggctgatggaggacccg 135
                |||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 27164918 gggatgggtttcgtgatggagttcgcggagaacctgatcctgcggatgatggaggacccg 27164977

                                                                            
Query: 136      gagcagcgggacgaggcgcagcgggcgcacgtctaccggatgaaggagcggtgcgagcgc 195
                | | ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 27164978 gggaagcgggacgcggcgcagcgggagcacgtgtaccggatgaaggagcggtgcgagcgc 27165037

                                                                            
Query: 196      accaaggcggcctgggcgctcccgctccgcccctacggcttctggaccttcgaccgcttc 255
                ||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27165038 accaaggcggcgtggagcctcccgctccgcccctacggcttctggaccttcgaccgcttc 27165097

                                                                            
Query: 256      aactcccagctctcctgggacccccagatcagccaggccgccggccgccgcgacccctac 315
                |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||
Sbjct: 27165098 aactcccagctctcctgggatccccagatcagccacgcccccggccgccgcgacccctac 27165157

                            
Query: 316      gacgacctcctc 327
                |||||| |||||
Sbjct: 27165158 gacgacgtcctc 27165169
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>dbj|AK062981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-F03, full
           insert sequence
          Length = 583

 Score =  365 bits (184), Expect = 7e-98
 Identities = 235/252 (93%)
 Strand = Plus / Plus

                                                                       
Query: 76  gggatgggattcatcatggagttcgcggagaacctgatcctgcggctgatggaggacccg 135
           |||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 35  gggatgggtttcgtgatggagttcgcggagaacctgatcctgcggatgatggaggacccg 94

                                                                       
Query: 136 gagcagcgggacgaggcgcagcgggcgcacgtctaccggatgaaggagcggtgcgagcgc 195
           | | ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 95  gggaagcgggacgcggcgcagcgggagcacgtgtaccggatgaaggagcggtgcgagcgc 154

                                                                       
Query: 196 accaaggcggcctgggcgctcccgctccgcccctacggcttctggaccttcgaccgcttc 255
           ||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 accaaggcggcgtggagcctcccgctccgcccctacggcttctggaccttcgaccgcttc 214

                                                                       
Query: 256 aactcccagctctcctgggacccccagatcagccaggccgccggccgccgcgacccctac 315
           |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||
Sbjct: 215 aactcccagctctcctgggatccccagatcagccacgcccccggccgccgcgacccctac 274

                       
Query: 316 gacgacctcctc 327
           |||||| |||||
Sbjct: 275 gacgacgtcctc 286
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>gb|AY106192.1| Zea mays PCO072441 mRNA sequence
          Length = 708

 Score =  283 bits (143), Expect = 2e-73
 Identities = 227/255 (89%)
 Strand = Plus / Plus

                                                                       
Query: 78  gatgggattcatcatggagttcgcggagaacctgatcctgcggctgatggaggacccgga 137
           |||||| ||||||||||| ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 150 gatgggtttcatcatggacttcgcggagaatctgatcctccgtctgatggaggacccgga 209

                                                                       
Query: 138 gcagcgggacgaggcgcagcgggcgcacgtctaccggatgaaggagcggtgcgagcgcac 197
             |||| ||| |||  | ||||| ||| ||||||  ||||||||||||||||||||||||
Sbjct: 210 caagcgcgaccaggttcggcgggagcatgtctacaagatgaaggagcggtgcgagcgcac 269

                                                                       
Query: 198 caaggcggcctgggcgctcccgctccgcccctacggcttctggaccttcgaccgcttcaa 257
            |||||||| |||   ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 270 taaggcggcgtggagcctccctctgcgcccctacggcttctggaccttcgaccgcttcaa 329

                                                                       
Query: 258 ctcccagctctcctgggacccccagatcagccaggccgccggccgccgcgacccctacga 317
           ||| |||||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 330 ctcgcagctctcctgggatccccagatcagccaggccgccggccgtcgggacccctacga 389

                          
Query: 318 cgacctcctcgcccg 332
           ||||||| |||||||
Sbjct: 390 cgacctcatcgcccg 404
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>gb|BT016356.1| Zea mays clone Contig189 mRNA sequence
          Length = 636

 Score =  268 bits (135), Expect = 1e-68
 Identities = 225/255 (88%)
 Strand = Plus / Plus

                                                                       
Query: 78  gatgggattcatcatggagttcgcggagaacctgatcctgcggctgatggaggacccgga 137
           |||||| ||||||||||| |||||||||||  ||||||| || |||||||||||||||||
Sbjct: 96  gatgggtttcatcatggacttcgcggagaatatgatcctccgtctgatggaggacccgga 155

                                                                       
Query: 138 gcagcgggacgaggcgcagcgggcgcacgtctaccggatgaaggagcggtgcgagcgcac 197
             |||| ||| |||  | ||||| ||| ||||||   |||||||||||||||||||||||
Sbjct: 156 caagcgcgaccaggttcggcgggagcatgtctacaaaatgaaggagcggtgcgagcgcac 215

                                                                       
Query: 198 caaggcggcctgggcgctcccgctccgcccctacggcttctggaccttcgaccgcttcaa 257
            |||||||| |||   ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 216 taaggcggcgtggagcctccctctgcgcccctacggcttctggaccttcgaccgcttcaa 275

                                                                       
Query: 258 ctcccagctctcctgggacccccagatcagccaggccgccggccgccgcgacccctacga 317
           ||| |||||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 276 ctcgcagctctcctgggatccccagatcagccaggccgccggccgtcgggacccctacga 335

                          
Query: 318 cgacctcctcgcccg 332
           ||||||| |||||||
Sbjct: 336 cgacctcatcgcccg 350
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>gb|AY389672.1| Hyacinthus orientalis unknown mRNA
          Length = 621

 Score =  131 bits (66), Expect = 2e-27
 Identities = 99/110 (90%)
 Strand = Plus / Plus

                                                                       
Query: 221 tccgcccctacggcttctggaccttcgaccgcttcaactcccagctctcctgggaccccc 280
           ||||||| ||||| ||||||||||||||||| |||||| |||||||| |||||||| | |
Sbjct: 220 tccgcccttacggattctggaccttcgaccggttcaacgcccagctcgcctgggacgctc 279

                                                             
Query: 281 agatcagccaggccgccggccgccgcgacccctacgacgacctcctcgcc 330
           ||||||||||||   | |||||||||||||||||||||||||||||||||
Sbjct: 280 agatcagccaggttcctggccgccgcgacccctacgacgacctcctcgcc 329



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 91  atggagttcgcggagaacctgatcctgcggctgatggagga 131
           ||||||||||| ||||| |||||||| ||  ||||||||||
Sbjct: 90  atggagttcgctgagaatctgatccttcgtatgatggagga 130
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>gb|AY389729.1| Hyacinthus orientalis At1g67350-like protein mRNA, complete cds
          Length = 628

 Score =  131 bits (66), Expect = 2e-27
 Identities = 99/110 (90%)
 Strand = Plus / Plus

                                                                       
Query: 221 tccgcccctacggcttctggaccttcgaccgcttcaactcccagctctcctgggaccccc 280
           ||||||| ||||| ||||||||||||||||| |||||| |||||||| |||||||| | |
Sbjct: 215 tccgcccttacggattctggaccttcgaccggttcaacgcccagctcgcctgggacgctc 274

                                                             
Query: 281 agatcagccaggccgccggccgccgcgacccctacgacgacctcctcgcc 330
           ||||||||||||   | |||||||||||||||||||||||||||||||||
Sbjct: 275 agatcagccaggttcctggccgccgcgacccctacgacgacctcctcgcc 324



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 91  atggagttcgcggagaacctgatcctgcggctgatggagga 131
           ||||||||||| ||||| |||||||| ||  ||||||||||
Sbjct: 85  atggagttcgctgagaatctgatccttcgtatgatggagga 125
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>gb|AY389726.1| Hyacinthus orientalis unknown mRNA
          Length = 650

 Score =  119 bits (60), Expect = 7e-24
 Identities = 96/108 (88%)
 Strand = Plus / Plus

                                                                       
Query: 223 cgcccctacggcttctggaccttcgaccgcttcaactcccagctctcctgggacccccag 282
           ||||| ||||| ||||||||||||||||| |||||| | |||||| |||||||| | |||
Sbjct: 218 cgcccgtacggattctggaccttcgaccggttcaacgcacagctcgcctgggactctcag 277

                                                           
Query: 283 atcagccaggccgccggccgccgcgacccctacgacgacctcctcgcc 330
           ||||||||||   | |||||||||||||||||||||||||||||||||
Sbjct: 278 atcagccaggttcctggccgccgcgacccctacgacgacctcctcgcc 325



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 91  atggagttcgcggagaacctgatcctgcggctgatggagga 131
           ||||||||||| ||||| |||||||| ||  ||||||||||
Sbjct: 86  atggagttcgctgagaatctgatccttcgtatgatggagga 126
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>gb|AF366446.1|AF366446 Allium cepa clone AGF125 maintainer line sequence
          Length = 498

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 84  attcatcatggagttcgcggagaacctgatcct 116
           |||||| |||||||||||||||||||| |||||
Sbjct: 468 attcataatggagttcgcggagaacctaatcct 436



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 297 cggccgccgcgacccctacgacgacctcct 326
           |||||| ||||||||||||||||| |||||
Sbjct: 255 cggccgtcgcgacccctacgacgatctcct 226
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 108     cctgatcctgcggctgatggagga 131
               ||||||||||||||||||||||||
Sbjct: 1092745 cctgatcctgcggctgatggagga 1092768
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>dbj|AB189463.1| Rhodobacter sphaeroides f. sp. denitrificans treY gene for
           maltoologosyl trehalose synthase, complete cds
          Length = 2616

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 108 cctgatcctgcggctgatggagga 131
           ||||||||||||||||||||||||
Sbjct: 867 cctgatcctgcggctgatggagga 890
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>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 321    cctcctcgcccggcacggcggcc 343
              |||||||||||||||||||||||
Sbjct: 137656 cctcctcgcccggcacggcggcc 137678
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    acgacgacctcctcgcccggc 334
              |||||||||||||||||||||
Sbjct: 346861 acgacgacctcctcgcccggc 346841
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 285     cagccaggccgccggccgccg 305
               |||||||||||||||||||||
Sbjct: 4112637 cagccaggccgccggccgccg 4112617
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 325    ctcgcccggcacggcggccccgccc 349
              |||||||||| ||||||||||||||
Sbjct: 217289 ctcgcccggcccggcggccccgccc 217313



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 313    tacgacgacctcctcgcccggcac 336
              ||||||| ||||||||||||||||
Sbjct: 217178 tacgacggcctcctcgcccggcac 217201
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>emb|BX470121.7| Zebrafish DNA sequence from clone DKEY-267G17 in linkage group 7,
             complete sequence
          Length = 97476

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     acacacacacacgcagatcga 21
             |||||||||||||||||||||
Sbjct: 50322 acacacacacacgcagatcga 50302
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>gb|AC116993.2| Homo sapiens chromosome 1 clone RP4-561P1, complete sequence
          Length = 101893

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   actcccagctctcctgggacc 277
             |||||||||||||||||||||
Sbjct: 95625 actcccagctctcctgggacc 95645
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>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene
              cluster, partial sequence
          Length = 127559

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    gccccgccccgtcctcctcgt 361
              |||||||||||||||||||||
Sbjct: 127326 gccccgccccgtcctcctcgt 127346
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 287     gccaggccgccggccgccgcg 307
               |||||||||||||||||||||
Sbjct: 3229196 gccaggccgccggccgccgcg 3229216
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>ref|XM_310742.2| Anopheles gambiae str. PEST ENSANGP00000010052
           (ENSANGG00000007563), partial mRNA
          Length = 1491

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  gatgggattcatcatggagtt 98
           |||||||||||||||||||||
Sbjct: 828 gatgggattcatcatggagtt 808
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>ref|XM_524448.1| PREDICTED: Pan troglodytes zinc finger, SWIM domain containing 4
           (LOC469063), mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 ccaggccgccggccgccgcg 307
           ||||||||||||||||||||
Sbjct: 844 ccaggccgccggccgccgcg 825
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 292    gccgccggccgccgcgacccctac 315
              |||| |||||||||||||||||||
Sbjct: 546182 gccggcggccgccgcgacccctac 546159
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>ref|XM_882793.1| PREDICTED: Bos taurus hypothetical protein LOC617405 (LOC617405),
           mRNA
          Length = 780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 136 gagcagcgggacgaggcgcagcgggcgc 163
           ||||||||||| |||| |||||||||||
Sbjct: 237 gagcagcgggaggaggagcagcgggcgc 210
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 292     gccgccggccgccgcgacccctac 315
               |||| |||||||||||||||||||
Sbjct: 3228907 gccggcggccgccgcgacccctac 3228930
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>ref|NM_023072.1| Homo sapiens zinc finger, SWIM-type containing 4 (ZSWIM4), mRNA
          Length = 4340

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  ccaggccgccggccgccgcg 307
            ||||||||||||||||||||
Sbjct: 2590 ccaggccgccggccgccgcg 2571
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>gb|AC149058.7| Mus musculus BAC clone RP23-338G5 from chromosome 7, complete sequence
          Length = 219369

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    ggccccgccccgtcctcctc 359
              ||||||||||||||||||||
Sbjct: 171962 ggccccgccccgtcctcctc 171943
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>gb|AC124574.4| Mus musculus BAC clone RP23-160J13 from 7, complete sequence
          Length = 176188

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    ggccccgccccgtcctcctc 359
              ||||||||||||||||||||
Sbjct: 150154 ggccccgccccgtcctcctc 150173
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 286     agccaggccgccggccgccg 305
               ||||||||||||||||||||
Sbjct: 2755981 agccaggccgccggccgccg 2756000
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>emb|AL031259.1|HS191N21 Human DNA sequence from clone RP1-191N21 on chromosome 6q27 Contains a
             7 transmembrane receptor (rhodopsin family) (olfactory
             receptor like) pseudogene, the PDCD2 gene for programmed
             cell death 2 (RP8 homolog), the TBP gene for TATA box
             binding protein, the PSMB1 gene for proteasome subunit HC5
             and two CpG islands, complete sequence
          Length = 113820

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   ggcacggcggccccgccccg 351
             ||||||||||||||||||||
Sbjct: 94747 ggcacggcggccccgccccg 94728
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 292     gccgccggccgccgcgacccctac 315
               |||| |||||||||||||||||||
Sbjct: 2958772 gccggcggccgccgcgacccctac 2958795
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   cctacgacgacctcctcgcc 330
             ||||||||||||||||||||
Sbjct: 49985 cctacgacgacctcctcgcc 50004
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>emb|AL009188.1|DMC165H7 Drosophila melanogaster cosmid clone 165H7
          Length = 34159

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 78   gatgggattcat-catggagttcgcgga 104
            |||||||||||| |||||||||||||||
Sbjct: 3592 gatgggattcattcatggagttcgcgga 3619
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    gatcagccaggccgccggcc 301
              ||||||||||||||||||||
Sbjct: 217041 gatcagccaggccgccggcc 217060
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>gb|AC105774.8| Drosophila melanogaster X BAC RP98-8O5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170186

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 78    gatgggattcat-catggagttcgcgga 104
             |||||||||||| |||||||||||||||
Sbjct: 45744 gatgggattcattcatggagttcgcgga 45771
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>dbj|AK022283.1| Homo sapiens cDNA FLJ12221 fis, clone MAMMA1001091
          Length = 2122

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 ccaggccgccggccgccgcg 307
           ||||||||||||||||||||
Sbjct: 373 ccaggccgccggccgccgcg 354
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>gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, complete sequence
          Length = 214530

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   ccaggccgccggccgccgcg 307
             ||||||||||||||||||||
Sbjct: 43622 ccaggccgccggccgccgcg 43603
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>gb|BC102654.1| Bos taurus cDNA clone IMAGE:7956015, partial cds
          Length = 1186

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 136 gagcagcgggacgaggcgcagcgggcgc 163
           ||||||||||| |||| |||||||||||
Sbjct: 13  gagcagcgggaggaggagcagcgggcgc 40
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 328     gcccggcacggcggccccgc 347
               ||||||||||||||||||||
Sbjct: 4824187 gcccggcacggcggccccgc 4824206
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>gb|AF263012.1|AF263011S2 Streptomyces griseus subsp. griseus macrotetrolide biosynthesis gene
            cluster, downstream region
          Length = 10029

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  caggccgccggccgccgcga 308
            ||||||||||||||||||||
Sbjct: 7975 caggccgccggccgccgcga 7994
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 311    cctacgacgacctcctcgcccggc 334
              ||||||| ||||||||||||||||
Sbjct: 318390 cctacgaggacctcctcgcccggc 318367
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>dbj|AK024452.1| Homo sapiens mRNA for FLJ00044 protein, partial cds
          Length = 4340

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  ccaggccgccggccgccgcg 307
            ||||||||||||||||||||
Sbjct: 2590 ccaggccgccggccgccgcg 2571
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>gb|AE003417.4| Drosophila melanogaster chromosome X, section 1 of 74 of the complete
              sequence
          Length = 387740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 78     gatgggattcat-catggagttcgcgga 104
              |||||||||||| |||||||||||||||
Sbjct: 303227 gatgggattcattcatggagttcgcgga 303254
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>gb|AY772007.1| Nocardioides sp. JS614 putative PAPS reductase gene, partial cds;
             putative argininosuccinate lyase, putative
             1-aminocyclopropane-1-carboxylate deaminase, putative
             adenylosuccinate lyase, putative phosphosulfolactate
             synthase, putative oxidoreductase/dehydrogenase, putative
             short-chain dehydrogenase, putative acyl-CoA transferase,
             putative acyl-CoA synthetase, epoxyalkane: coenzyme M
             transferase (etnE), probable alkene monooxygenase beta
             subunit (etnA), probable alkene monooxygenase effector
             (etnB), probable alkene monooxygenase alpha subunit
             (etnC), probable alkene monooxygenase reductase,
             hypothetical proteins, putative dimethylsulfoxide
             reductase, hypothetical protein, putative TraA conjugation
             protein, hypothetical protein, putative ParB partitioning
             protein, and hypothetical proteins genes, complete cds;
             putative DNA integrase/recombinase gene, partial cds; and
             unknown gene
          Length = 34814

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   aggccgccggccgccgcgac 309
             ||||||||||||||||||||
Sbjct: 26977 aggccgccggccgccgcgac 26958
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 314    acgacgacctcctcgcccggcacg 337
              ||||||||||||||||||| ||||
Sbjct: 229488 acgacgacctcctcgcccgccacg 229511
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 311     cctacgacgacctcctcgcccggc 334
               ||||||| ||||||||||||||||
Sbjct: 1567071 cctacgaggacctcctcgcccggc 1567094
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>gb|AY675212.1| Oryzias latipes hypothetical protein mRNA, partial cds
          Length = 681

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 108 cctgatcctgcggctgatgg 127
           ||||||||||||||||||||
Sbjct: 192 cctgatcctgcggctgatgg 173
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>emb|Y10684.1|HSTBPGENE H.sapiens tbp gene, promoter region
          Length = 832

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 332 ggcacggcggccccgccccg 351
           ||||||||||||||||||||
Sbjct: 551 ggcacggcggccccgccccg 570
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>dbj|D14668.1|HUMHC5 Human gene for proteasome HC5, 5'-flanking region
          Length = 2519

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  ggcacggcggccccgccccg 351
            ||||||||||||||||||||
Sbjct: 1446 ggcacggcggccccgccccg 1427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,898,920
Number of Sequences: 3902068
Number of extensions: 12898920
Number of successful extensions: 151228
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 149413
Number of HSP's gapped (non-prelim): 1818
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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