ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-cont... 82 8e-16
2ZN363_HUMAN (Q96PM5) RING finger and CHY zinc finger domain-cont... 81 1e-15
3TRPA_MAIZE (P42390) Indole-3-glycerol phosphate lyase, chloropla... 35 0.069
4HOT13_KLULA (Q6CIK2) Helper of Tim protein 13 34 0.20
5RSPO1_BRARE (Q6DHR0) R-spondin-1 precursor (Roof plate-specific ... 33 0.34
6HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated... 32 0.58
7CENPB_HUMAN (P07199) Major centromere autoantigen B (Centromere ... 32 0.76
8NIFA_AZOBR (P30667) Nif-specific regulatory protein 32 0.76
9ARI3A_HUMAN (Q99856) AT-rich interactive domain-containing prote... 31 1.3
10TGT_PASMU (P57831) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)... 31 1.3
11NHS_HUMAN (Q6T4R5) Nance-Horan syndrome protein (Congenital cata... 30 2.2
12HOT13_YEAST (P36078) Helper of Tim protein 13 30 2.2
13SOX9_PONPY (P61754) Transcription factor SOX-9 30 2.9
14SOX9_PANTR (Q9BG89) Transcription factor SOX-9 30 2.9
15SOX9_MACMU (P61753) Transcription factor SOX-9 30 2.9
16SOX9_HUMAN (P48436) Transcription factor SOX-9 30 2.9
17SOX9_CALJA (Q9BG91) Transcription factor SOX-9 30 2.9
18PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type... 30 2.9
19CLPX_LEPIN (Q8F353) ATP-dependent Clp protease ATP-binding subun... 30 2.9
20CLPX_LEPIC (Q72SG5) ATP-dependent Clp protease ATP-binding subun... 30 2.9
21TGT_MANSM (Q65S94) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)... 29 4.9
22CHEB2_CAUCR (Q9AAK0) Chemotaxis response regulator protein-gluta... 29 4.9
23H6ST3_HUMAN (Q8IZP7) Heparan-sulfate 6-O-sulfotransferase 3 (EC ... 29 4.9
24CYC3_DESAC (P00137) Cytochrome c3 (Cytochrome c7) (Cytochrome c5... 29 4.9
25FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1... 29 6.4
26PRDM5_MOUSE (Q9CXE0) PR domain zinc finger protein 5 (PR domain-... 29 6.4
27CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24 29 6.4
28FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-l... 29 6.4
29PRDM5_HUMAN (Q9NQX1) PR domain zinc finger protein 5 (PR domain-... 29 6.4
30SYA_PICTO (Q6L1Z4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 29 6.4
31F112B_MOUSE (Q9DAN6) Protein FAM112B 29 6.4
32F112B_BOVIN (Q3SZU0) Protein FAM112B 29 6.4
33RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis prote... 28 8.4
34TRAF2_HUMAN (Q12933) TNF receptor-associated factor 2 (Tumor nec... 28 8.4
35NKG2D_RAT (O70215) NKG2-D type II integral membrane protein (NKG... 28 8.4
36FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.7... 28 8.4
37RNZ_BACTN (Q89ZN1) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNa... 28 8.4

>ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-containing protein|
           1 (Zinc finger protein 363) (CH-rich-interacting match
           with PLAG1) (Androgen receptor N-terminal-interacting
           protein)
          Length = 261

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 34/95 (35%), Positives = 49/95 (51%)
 Frame = +3

Query: 168 GQMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISK 347
           G  +L     GCEHY R C ++APCC +++ CR CH         D  + H + R ++ +
Sbjct: 9   GVRNLAQGPRGCEHYDRACLLKAPCCDKLYTCRLCH---------DTNEDHQLDRFKVKE 59

Query: 348 VICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFD 452
           V C  C K Q  Q+ C  C    G+Y+C  C+ FD
Sbjct: 60  VQCINCEKLQHAQQTCEDCSTLFGEYYCSICHLFD 94



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>ZN363_HUMAN (Q96PM5) RING finger and CHY zinc finger domain-containing protein|
           1 (Zinc finger protein 363) (CH-rich-interacting match
           with PLAG1) (Androgen receptor N-terminal-interacting
           protein)
          Length = 261

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 32/87 (36%), Positives = 49/87 (56%)
 Frame = +3

Query: 192 QHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVICSLCNK 371
           Q GCEHY R C ++APCC +++ CR CH+  ++         H + R ++ +V C  C K
Sbjct: 17  QRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNED---------HQLDRFKVKEVQCINCEK 67

Query: 372 EQDVQKNCSGCGACMGKYFCEKCNFFD 452
            Q  Q+ C  C    G+Y+C+ C+ FD
Sbjct: 68  IQHAQQTCEECSTLFGEYYCDICHLFD 94



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>TRPA_MAIZE (P42390) Indole-3-glycerol phosphate lyase, chloroplast precursor|
           (EC 4.1.2.-) (Indole synthase) (Tryptophan synthase
           alpha chain) (EC 4.2.1.20) (Benzoxazineless 1)
          Length = 347

 Score = 35.4 bits (80), Expect = 0.069
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
 Frame = -3

Query: 231 VSCTSSCNARSRAA---LPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESLAAL 76
           V  T++  AR+ AA   +P  P   P+PA VPP+  AA P ER+   V +++AAL
Sbjct: 44  VVVTTTTTARAAAAAVTVPAAPPQAPAPAPVPPKQAAA-PAERRSRPVSDTMAAL 97



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>HOT13_KLULA (Q6CIK2) Helper of Tim protein 13|
          Length = 114

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +3

Query: 201 CEHYTRRCRI---RAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVICSLCNK 371
           CEH+     +   R  CC   + C  CH +    L   V +R++I    +  VIC +C  
Sbjct: 17  CEHWHGPLDVIALRFKCCNGYYACYECHQE----LVPHVTERYNINDETVPLVICGVCKL 72

Query: 372 E 374
           E
Sbjct: 73  E 73



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>RSPO1_BRARE (Q6DHR0) R-spondin-1 precursor (Roof plate-specific spondin-1)|
          Length = 261

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
 Frame = +3

Query: 195 HGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVIC-----S 359
           +GCEH           C E  GC  C  +        +L+R+DI +  I    C      
Sbjct: 43  NGCEH-----------CSEYNGCLKCRPRL-----FILLERNDIRQIGICLAACPVGYYG 86

Query: 360 LCNKEQDVQKNCS--GCGACMGKYFCEKC 440
           + N++ +    C    C AC  + FC KC
Sbjct: 87  IRNRDMNKCTQCKIENCEACFSRNFCTKC 115



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>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2)
          Length = 889

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = -3

Query: 192 ALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESL 85
           A PP P   P+P   PPR +A PPE   E G R  L
Sbjct: 42  APPPGPG--PAPPQHPPRAEALPPEAADEGGPRGRL 75



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>CENPB_HUMAN (P07199) Major centromere autoantigen B (Centromere protein B)|
           (CENP-B)
          Length = 599

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -3

Query: 231 VSCTSSCNARSRAALPPNPSVRPSPAFVPPRG 136
           VSC+    AR+R A P  P+   SPA VP  G
Sbjct: 133 VSCSGVARARARNAAPRTPAAPASPAAVPSEG 164



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>NIFA_AZOBR (P30667) Nif-specific regulatory protein|
          Length = 625

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 216 SCNARSRAALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESL 85
           +C   SRA LPP  +  PSPA  PP     P +E +   +R+ L
Sbjct: 544 ACPCPSRAPLPPQ-APPPSPAAAPPPAAEVPLDEPESGSLRDRL 586



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>ARI3A_HUMAN (Q99856) AT-rich interactive domain-containing protein 3A (ARID|
           domain-containing protein 3A) (B-cell regulator of IgH
           transcription) (Bright) (E2F-binding protein 1)
          Length = 593

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -3

Query: 201 SRAALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESLAALXXXXXXXXXPAGI 37
           +R  LPP+P     PA  P R  AAP E+R+    R   A +          AG+
Sbjct: 23  ARQQLPPDP-----PAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAAAAGL 72



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>TGT_PASMU (P57831) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)|
           (tRNA-guanine transglycosylase) (Guanine insertion
           enzyme)
          Length = 385

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 147 ARKRETAGQMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCR 266
           A+ RE    +D   + + C+HYT+        CGE+ G R
Sbjct: 293 AKYREDTSPLDPECDCYTCKHYTKAYLYHLDKCGEILGAR 332



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>NHS_HUMAN (Q6T4R5) Nance-Horan syndrome protein (Congenital cataracts and|
           dental anomalies protein)
          Length = 1630

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 195 AALPPNPSVRPSPA--FVPPRGDAAPPEERKEAGVRESLAALXXXXXXXXXPA 43
           + LPP P   P+PA    PP G+A+   E   AG+ E+  A           A
Sbjct: 65  SGLPPPPPPLPAPADQTQPPHGEASVAGEESTAGIPEAAPAAGEASSAAAAAA 117



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>HOT13_YEAST (P36078) Helper of Tim protein 13|
          Length = 116

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 228 IRAPCCGEVFGCRHCHNQ-AKNSLE-VDVLDRHDIPRHEISKVICSLCNKE 374
           IR  CC + + C  CH + + + LE  D+LD  D  +H    +IC +C  E
Sbjct: 29  IRFKCCDKYYACFECHQELSSHPLEKYDLLD--DANKH---LIICGVCRHE 74



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>SOX9_PONPY (P61754) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 186 PPNPSVRPSPAFVPPRGDAAPPEE 115
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376



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>SOX9_PANTR (Q9BG89) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 186 PPNPSVRPSPAFVPPRGDAAPPEE 115
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376



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>SOX9_MACMU (P61753) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 186 PPNPSVRPSPAFVPPRGDAAPPEE 115
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376



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>SOX9_HUMAN (P48436) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 186 PPNPSVRPSPAFVPPRGDAAPPEE 115
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376



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>SOX9_CALJA (Q9BG91) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 186 PPNPSVRPSPAFVPPRGDAAPPEE 115
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376



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>PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC5)
           (Subtilisin/kexin-like protease PC5) (PC6)
           (Subtilisin-like proprotein convertase 6) (SPC6)
          Length = 1877

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
 Frame = +3

Query: 216 RRCRIRAPCCGEVFG-----CRHCH-----NQAKNSLEVDVLDRHDIPRHEISKVICSLC 365
           +RCR  AP C   FG     C  C      N+  +S    V    D    +I K +C  C
Sbjct: 686 KRCRKCAPNCESCFGSHGDQCLSCKYGYFLNEETSSC---VTQCPDGSYEDIKKNVCGKC 742

Query: 366 NKEQDVQKNCSGCGACMGKYFCEKC 440
           ++          C AC+G + C +C
Sbjct: 743 SE---------NCKACIGFHNCTEC 758



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>CLPX_LEPIN (Q8F353) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 420

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 345 KVICSLCNKEQDVQKNCSGCGACMGKYFCEKC 440
           K+ CS C KEQD  K      A  G Y C++C
Sbjct: 13  KLFCSFCGKEQDAVKRLV---AGPGVYICDEC 41



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>CLPX_LEPIC (Q72SG5) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 420

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 345 KVICSLCNKEQDVQKNCSGCGACMGKYFCEKC 440
           K+ CS C KEQD  K      A  G Y C++C
Sbjct: 13  KLFCSFCGKEQDAVKRLV---AGPGVYICDEC 41



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>TGT_MANSM (Q65S94) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)|
           (tRNA-guanine transglycosylase) (Guanine insertion
           enzyme)
          Length = 379

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +3

Query: 147 ARKRETAGQMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCR 266
           A+ ++    +D   + + C+HYT+        CGE+ G R
Sbjct: 293 AKYKDDTSPLDPHCDCYTCQHYTKSYLYHLDKCGEILGAR 332



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>CHEB2_CAUCR (Q9AAK0) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 2 operon (EC 3.1.1.61)
          Length = 347

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -3

Query: 201 SRAALPPNPSVRPSPAFVPPRGDAAPPEE 115
           +RAA P  P   P P   PP  D A P E
Sbjct: 129 ARAARPAPPQAAPRPTLAPPSSDPAGPIE 157



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>H6ST3_HUMAN (Q8IZP7) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)|
           (HS6ST-3)
          Length = 471

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 25/68 (36%)
 Frame = -3

Query: 228 SCTSSCN------------------ARSRAALPPN-----PSVRPSPAFVP--PRGDAAP 124
           SCTSSC                      RA  PP      P + P P   P  PRG AAP
Sbjct: 29  SCTSSCTNLGEQPRAGEAGPPAVPGPARRAQAPPEEWERRPQLPPPPRGPPEGPRGAAAP 88

Query: 123 PEERKEAG 100
            EE +E G
Sbjct: 89  EEEDEEPG 96



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>CYC3_DESAC (P00137) Cytochrome c3 (Cytochrome c7) (Cytochrome c551.5)|
          Length = 68

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/52 (26%), Positives = 18/52 (34%)
 Frame = +3

Query: 249 EVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVICSLCNKEQDVQKNCSGC 404
           E  GC  CH      + +D    H        K  C  C+K  +    C GC
Sbjct: 22  EKLGCDACHEGTPAKIAIDKKSAH--------KDACKTCHKSNNGPTKCGGC 65



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>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
           (Factor interacting with PAP) (hFip1) (Rearranged in
           hypereosinophilia)
          Length = 594

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 189 LPPNPSVRPSPAFVPPRGDAAPP 121
           LPP P+V  +P  +PP G   PP
Sbjct: 375 LPPPPTVSTAPPLIPPPGFPPPP 397



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>PRDM5_MOUSE (Q9CXE0) PR domain zinc finger protein 5 (PR domain-containing|
           protein 5)
          Length = 599

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 249 EVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVICSLCNK 371
           E+F C+ C    K  +  + L RH I   E     C +CNK
Sbjct: 287 EIFDCQEC---MKKFISANQLKRHMITHSEKRPYNCEICNK 324



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>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24|
          Length = 226

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
 Frame = +3

Query: 243 CGEVFGCRHCHNQ----AKNSLEVD--VLDRHDIPRHEISKVICSLCNK--EQDVQKNCS 398
           CG    C+  H++    A  +L  D  + ++ +  R E     C LC +  E+ V+ NC 
Sbjct: 122 CGYGDSCKFLHSRDDFKAGWTLATDWKIDEQKEETRKEAVPFKCVLCKESYERPVKTNC- 180

Query: 399 GCGACMGKYFCEKC 440
                 G YFC+KC
Sbjct: 181 ------GHYFCQKC 188



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>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 536

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 189 LPPNPSVRPSPAFVPPRGDAAPP 121
           LPP P+V  +P  +PP G   PP
Sbjct: 315 LPPPPTVSTAPPLIPPPGFPPPP 337



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>PRDM5_HUMAN (Q9NQX1) PR domain zinc finger protein 5 (PR domain-containing|
           protein 5)
          Length = 630

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 249 EVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVICSLCNK 371
           E+F C+ C    K  +  + L RH I   E     C +CNK
Sbjct: 318 EIFDCQEC---MKKFISANQLKRHMITHSEKRPYNCEICNK 355



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>SYA_PICTO (Q6L1Z4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 870

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 276 NQAKNSLEVDVLDRHDIPRHEISKVICSLCNKEQDVQKN 392
           N   N     + D + IP   ISKV   L NKE D+ +N
Sbjct: 425 NTISNENIAKIYDTYGIPLEIISKVFKDLTNKELDIPEN 463



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>F112B_MOUSE (Q9DAN6) Protein FAM112B|
          Length = 167

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
 Frame = +3

Query: 207 HYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLD-RHDIPRHEISKVICSLCNK---E 374
           H  R CR        +  CR  H    N L     + RH +PR EIS  I S  +K   E
Sbjct: 23  HQIRACRFPY----HLIKCRKNHPDVANKLATCPFNARHQVPRAEISHHISSCDDKSCIE 78

Query: 375 QDVQKNCSGCG 407
           QDV       G
Sbjct: 79  QDVVNQTRNLG 89



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>F112B_BOVIN (Q3SZU0) Protein FAM112B|
          Length = 167

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
 Frame = +3

Query: 207 HYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLD-RHDIPRHEISKVICSLCNK---E 374
           H  R CR        +  CR  H    N L     + RH +PR EIS  I S  +K   E
Sbjct: 23  HQIRACRFPY----HLIKCRKNHPDVANKLATCPFNARHQVPRAEISHHISSCDDKSCIE 78

Query: 375 QDVQKNCSGCG 407
           QDV       G
Sbjct: 79  QDVVNQTRSLG 89



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>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1)
          Length = 1615

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 231 VSCTSSCNARSRAALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRE 91
           VS   S  AR+ AA PP     P P   P  G A PPE R    +R+
Sbjct: 442 VSPPESPRARAAAAQPPTEHGPPPPR--PAPGPAEPPEPRVPEPLRK 486



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>TRAF2_HUMAN (Q12933) TNF receptor-associated factor 2 (Tumor necrosis factor|
           type 2 receptor-associated protein 3)
          Length = 501

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
 Frame = +3

Query: 192 QHGCEHYTRRCR-IRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVICSLCN 368
           +H C   +  CR  RAPCCG      H     K  L  D   +  IPR            
Sbjct: 153 EHECPERSLSCRHCRAPCCGADVKAHH-EVCPKFPLTCDGCGKKKIPR-----------E 200

Query: 369 KEQDVQKNCSGC 404
           K QD  K C  C
Sbjct: 201 KFQDHVKTCGKC 212



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>NKG2D_RAT (O70215) NKG2-D type II integral membrane protein|
           (NKG2-D-activating NK receptor) (NK cell receptor D)
           (Killer cell lectin-like receptor subfamily K member 1)
           (NKR-P2) (NK lectin-like receptor) (NKLLR) (CD314
           antigen)
          Length = 215

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 351 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFF 449
           I  LCNKE  V      CG C   + C + N +
Sbjct: 78  ITLLCNKEVSVSSREGYCGPCPNDWICHRNNCY 110



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>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)|
          Length = 1679

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 10/72 (13%)
 Frame = +3

Query: 255  FGCRHCHNQAKNSLEVDVLDRHDIPRHE-ISKVICSLCNKEQDVQKNCSGCGAC------ 413
            FGC+ CH+  K   +   L     P H  +   +C  C   Q      + C  C      
Sbjct: 1349 FGCQKCHHYCKTCNDAGPLACTSCPPHSMLDGGLCMECLSSQYYDTTSATCKTCHDSCRS 1408

Query: 414  ---MGKYFCEKC 440
                G++ C+ C
Sbjct: 1409 CFGPGQFSCKGC 1420



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>RNZ_BACTN (Q89ZN1) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3|
           endonuclease)
          Length = 316

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 225 RIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 350
           R R PCCG +F       Q  N +  D++D + +P +E++++
Sbjct: 142 RHRIPCCGFLFE----EKQRPNHIIRDMVDFYKVPVYELNRI 179


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.121    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,352,709
Number of Sequences: 219361
Number of extensions: 900314
Number of successful extensions: 5830
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 4956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5759
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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