ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart50a02 |
|---|---|
| Clone Library Name | barley_pub |
>TSC2_HUMAN (P49815) Tuberin (Tuberous sclerosis 2 protein)| Length = 1807 Score = 33.5 bits (75), Expect = 0.22 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +1 Query: 46 RLRSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQGY 186 + RS+ L + ++ GE RG G + +P SPSG++ +GY Sbjct: 1415 KARSQSGTLDGESAAWSASGEDSRGQPEGPLPSSSPRSPSGLRPRGY 1461
>DRD4_MOUSE (P51436) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 387 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 9/75 (12%) Frame = +1 Query: 64 PPLPNPTTRFACHGEP---------GRGAARGTVVRPAPSSPSGMKQQGYGGVRFESQRF 216 PPLP+ T + P G P P PS +++G E + Sbjct: 254 PPLPSLRTSPSDSSRPESELSQRPCSPGCLLADAALPQPPEPSSRRRRGAKITGRERKAM 313 Query: 217 RLLSIVVGCFLISVT 261 R+L +VVG FL+ T Sbjct: 314 RVLPVVVGAFLVCWT 328
>KCNQ2_HUMAN (O43526) Potassium voltage-gated channel subfamily KQT member 2| (Voltage-gated potassium channel subunit Kv7.2) (Neuroblastoma-specific potassium channel alpha subunit KvLQT2) (KQT-like 2) Length = 872 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 11/79 (13%) Frame = +1 Query: 10 PPASLISPYRHTRLRSKL------PPLPNPTTRFACHGE-----PGRGAARGTVVRPAPS 156 PP + + R+ + +S L PP P+P+ C G PGR + + ++ S Sbjct: 386 PPLNQLELLRNLKSKSGLAFRKDPPPEPSPSKGSPCRGPLCGCCPGRSSQKVSLKDRVFS 445 Query: 157 SPSGMKQQGYGGVRFESQR 213 SP G+ +G G + ++ R Sbjct: 446 SPRGVAAKGKGSPQAQTVR 464
>ZN342_HUMAN (Q8WUU4) Zinc finger protein 342| Length = 475 Score = 30.4 bits (67), Expect = 1.9 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 5/69 (7%) Frame = +1 Query: 1 RKRPPASLISPYRHTRLRSKLPPLPN-----PTTRFACHGEPGRGAARGTVVRPAPSSPS 165 R+ PP S + S PP P PT+ C G G GAA V+ P +P Sbjct: 282 RQVPPQSPLMADTSQEQASAAPPEPAVHAAAPTSTLPCSGGEGAGAAATAGVQ-EPGAPG 340 Query: 166 GMKQQGYGG 192 Q G GG Sbjct: 341 SGAQAGPGG 349
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2160 Score = 30.0 bits (66), Expect = 2.5 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 12/62 (19%) Frame = +1 Query: 13 PASLISPYRHTR------LRSKLPPLPNPTTRFACH------GEPGRGAARGTVVRPAPS 156 P L SP R +RS+ PP+P P A + G PG +R + PAP Sbjct: 803 PRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPPVSRFPLEEPAPP 862 Query: 157 SP 162 P Sbjct: 863 GP 864
>DPOL_ADE40 (P48311) DNA polymerase (EC 2.7.7.7)| Length = 1188 Score = 30.0 bits (66), Expect = 2.5 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 286 SIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPR 402 ++VFD P++AWL E + A+ P S F +P+ Sbjct: 1031 NLVFDPKHPELAWLVECETVCAQCGADAYSPESVFLAPK 1069
>TILS_TROW8 (Q83I94) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 407 Score = 29.6 bits (65), Expect = 3.2 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 356 VLAGALRGSSSHAILGL-SVSKTMESGRVERRKVTEMRKQPTTMDSSRKRCDSNRTPP*P 180 VL G +RGS ++ G+ +VS T E R K ++ R CDS PP P Sbjct: 142 VLLGLMRGSGPSSLRGMKAVSYTPEDCRYMNNKACNSVTAVYAHNTQRCSCDSRPYPPPP 201
>COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)| Length = 317 Score = 29.6 bits (65), Expect = 3.2 Identities = 19/57 (33%), Positives = 23/57 (40%) Frame = +1 Query: 34 YRHTRLRSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQGYGGVRFE 204 Y R + P P P GEPG G A G RP P G ++G G + E Sbjct: 133 YHSNRNQPGPPGPPGPPGAAGARGEPGPGGAPGFPGRPGVQGPPG--ERGLPGEKGE 187
>KCNH2_CANFA (Q9TSZ3) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (c-erg) (DERG) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1158 Score = 29.6 bits (65), Expect = 3.2 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = +1 Query: 10 PPASLISPYRHTRLRSKLPPLPNPTTR--FACHGEPGRGAARGTVVRPAPSSPS 165 PP S ++P R R KLP L TTR A G G A G VV SP+ Sbjct: 150 PPTSWLAPGRAKTFRLKLPALLALTTRESSARPGGVGSAGAPGAVVVDVDLSPA 203
>SNT2_SCHPO (Q10077) Lid2 complex component snt2 (Lid2C component snt2)| Length = 1131 Score = 29.6 bits (65), Expect = 3.2 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -2 Query: 179 CCFMPDGDDGAGRTTVPLAAPLPGSPWHAKRVVGF 75 CC +P+G+ V + +P PG P+ R++ F Sbjct: 96 CCVLPNGELIQPNDFVLVNSPFPGEPFQIARIISF 130
>SYD_RHOS4 (Q3IZP1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 591 Score = 29.3 bits (64), Expect = 4.2 Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 8/72 (11%) Frame = -2 Query: 257 TEMRKQPTTMDSSRKRCD-------SNRTPP*PCCFMPDGDDGAGRTTVPLAAPL-PGSP 102 TE+R P SRK CD S P F GDDGA PLA + P Sbjct: 323 TEIRAIPAPTGGSRKFCDRMNAFAQSQGLPGMGYIFWRKGDDGAMEAAGPLAKNIGPERT 382 Query: 101 WHAKRVVGFGNG 66 ++ +G G G Sbjct: 383 EAIRQQLGLGEG 394
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 29.3 bits (64), Expect = 4.2 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +1 Query: 280 PDSIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPRGLG 411 PD ++ + PK+ L+E S ++T++P S SP G G Sbjct: 507 PDPEPYEPIPPKLIPLDEECSMDETPYVETLEPGGSGGSPDGAG 550
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 29.3 bits (64), Expect = 4.2 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +1 Query: 280 PDSIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPRGLG 411 PD ++ + PK+ L+E S ++T++P S SP G G Sbjct: 507 PDPEPYEPIPPKLIPLDEECSMDETPYVETLEPGGSGGSPDGAG 550
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 29.3 bits (64), Expect = 4.2 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +1 Query: 280 PDSIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPRGLG 411 PD ++ + PK+ L+E S ++T++P S SP G G Sbjct: 507 PDPEPYEPIPPKLIPLDEECSMDETPYVETLEPGGSGGSPDGAG 550
>AREA_EMENI (P17429) Nitrogen regulatory protein areA| Length = 876 Score = 29.3 bits (64), Expect = 4.2 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = -2 Query: 299 SKTMESGRVER---RKVTEMRKQPTTMDSSRKRCDS-NRTPP*PCCFMPDGDDGAGRTTV 132 S + S RV + RK + + PT SSR + ++ + +PP MP G G G V Sbjct: 727 SLAVGSSRVSKKSARKNSVQQVTPTAPTSSRAQSNTTSESPP----AMP-GSSGRGSGVV 781 Query: 131 PLAAPLPGSPWHAKRVVGFGNG 66 P+AA P S A G NG Sbjct: 782 PIAAAPPKSSSAATTSPGTNNG 803
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 29.3 bits (64), Expect = 4.2 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Frame = -2 Query: 347 GALRGSSSHAILGLSVSKTMESGRVERRKV---TEMRKQPTTMDSSRKRCDSNRTPP*PC 177 G++ +SS L S+ +G E+ + T + K P+T S R S+ P Sbjct: 1131 GSIPSASSPTSPALPRSEPPPAGPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPT 1190 Query: 176 CFMPDGDDGAGR--TTVPLAAPLPGSP 102 PDG G G + P +P+P SP Sbjct: 1191 --QPDGAGGGGSSPSPAPATSPVPPSP 1215
>TAU_SPECI (Q6TS35) Microtubule-associated protein tau| Length = 429 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 197 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSTKSR 230
>TAU_PONPY (Q5S6V2) Microtubule-associated protein tau| Length = 757 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 525 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 558
>TAU_HUMAN (P10636) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 757 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 525 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 558
>TAU_BOVIN (P29172) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 447 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 215 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSAAKSR 248
>TAU_CAPHI (O02828) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 402 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 170 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSAAKSR 203
>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 751 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 519 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSASKSR 552
>TAU_PANTR (Q5YCW1) Microtubule-associated protein tau| Length = 775 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 543 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 576
>TAU_HYLLA (Q5YCV9) Microtubule-associated protein tau| Length = 775 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 543 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 576
>TAU_GORGO (Q5YCW0) Microtubule-associated protein tau| Length = 775 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 543 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 576
>HN_NDVM (P12557) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 571 Score = 28.9 bits (63), Expect = 5.5 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = -2 Query: 356 VLAGALRGSSSHAILGLSVSKTMESGRVERRKVTEMRKQPTTMDSSRKRCDSNRTP 189 +L+G S SH L L V +T +GRV + + T +RK C + TP Sbjct: 192 ILSGCRDHSQSHQYLALGVLRTSATGRVFFSTLRSINLDDT---QNRKSCSVSATP 244
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/62 (33%), Positives = 23/62 (37%) Frame = +1 Query: 13 PASLISPYRHTRLRSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQGYGG 192 P I P+ R K P LP G PG+ GT PS P G GY G Sbjct: 662 PQGAIGPHGEKGARGK-PGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQG--PLGYPG 718 Query: 193 VR 198 R Sbjct: 719 PR 720
>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 732 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +1 Query: 52 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 180 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 500 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSASKSR 533
>GCC_RAT (P20762) Ig gamma-2C chain C region| Length = 329 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/66 (31%), Positives = 28/66 (42%) Frame = -2 Query: 308 LSVSKTMESGRVERRKVTEMRKQPTTMDSSRKRCDSNRTPP*PCCFMPDGDDGAGRTTVP 129 LS S T+ S + VT P T + KR + R P P + DD GR +V Sbjct: 64 LSSSVTVPSSTWSSQTVTCSVAHPATKSNLIKRIEPRRPKPRPPTDICSCDDNLGRPSVF 123 Query: 128 LAAPLP 111 + P P Sbjct: 124 IFPPKP 129
>UBQL4_HUMAN (Q9NRR5) Ubiquilin-4 (Ataxin-1 ubiquitin-like-interacting protein| A1U) Length = 601 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = +1 Query: 67 PLPNP------TTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQGYGGVRFESQRFRLL 225 PLPNP T++ G G G + + V P S+P G+ G F S + L Sbjct: 328 PLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNPFGINAASLGSGMFNSPEMQAL 386
>UBQL4_MOUSE (Q99NB8) Ubiquilin-4 (Ataxin-1 ubiquitin-like-interacting protein| A1U) Length = 596 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = +1 Query: 67 PLPNP------TTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQGYGGVRFESQRFRLL 225 PLPNP T++ G G G + + V P S+P G+ G F S + L Sbjct: 323 PLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNPFGINAASLGSGMFNSPEMQAL 381
>CEP35_HUMAN (Q5VT06) Centrosome-associated protein 350 (Centrosome-associated| protein of 350 kDa) Length = 3117 Score = 28.5 bits (62), Expect = 7.2 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 11/87 (12%) Frame = -2 Query: 332 SSSHAILGLSVSKTMESGRVERRKVTEMRK------QPTTMDSSRKRCDSNRTPP*PCCF 171 S+ + G SVS + + GR ++ + + Q +S +R S+ PP F Sbjct: 1231 STLEDLSGHSVSVSSDKGRSQKTPTSPLSPSSQKSLQFDVAGTSSERSKSSVMPPTITGF 1290 Query: 170 MP-----DGDDGAGRTTVPLAAPLPGS 105 P D + A RTT AP+PGS Sbjct: 1291 KPNAPLTDLNPAASRTTTENMAPIPGS 1317
>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)| Length = 1338 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Frame = +1 Query: 13 PASLISPYRHTRLRSKLPPLPNPTTRFACHGEPGRGAARGTV-VRPAPSSPSGMKQQGYG 189 P SL S H PP P+P H PG+ + G+ +PS P M YG Sbjct: 445 PGSLSSSSGHGSGSYPPPPGPHPPLPHPLHHGPGQRPSSGSASASGSPSDPGFMSLDEYG 504
>AMT_CORGL (P54146) Ammonia channel (Ammonia transporter)| Length = 452 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +1 Query: 91 FACHGEPGRGAARGTVVRPAPSSPSGMKQQGYGGVRFESQRFRLLSIVVGCFLISVTFLL 270 FA HG G A ++ P +P+G+ +GG R L IV + VT+L+ Sbjct: 317 FAVHGMAGIAGALFVMLFGDPLAPAGVSGVFFGGELSLLWREPLAIIVTLTYAFGVTWLI 376 Query: 271 ST 276 +T Sbjct: 377 AT 378
>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 888 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +1 Query: 280 PDSIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPRGLG 411 PD ++ + PK+ L+E + ++T++P S SP G G Sbjct: 507 PDPEPYEPIPPKLIPLDEECAMDETPYVETLEPGGSGGSPDGAG 550
>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (PNUTS protein) (MHC class I region proline-rich protein CAT53) Length = 872 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +1 Query: 280 PDSIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPRGLG 411 PD ++ + PK+ L+E + ++T++P S SP G G Sbjct: 507 PDPEPYEPIPPKLIPLDEECAMDETPYVETLEPGGSGGSPDGAG 550
>COL7_CAEEL (P18832) Cuticle collagen 7 precursor| Length = 316 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +1 Query: 73 PNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQGYGG 192 P P G+PG G A G P P+ P+G Q G+ G Sbjct: 212 PGPQGPPGAPGQPGSGNAPGPAGPPGPAGPNG--QPGHPG 249 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,457,822 Number of Sequences: 219361 Number of extensions: 848655 Number of successful extensions: 4241 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3552 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4228 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
