ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart49h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (P... 50 1e-06
2MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precu... 44 9e-05
3MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial pre... 44 9e-05
4MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial pre... 44 9e-05
5MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial pre... 42 3e-04
6MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial pre... 39 0.003
7MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial pre... 39 0.003
8MPCP_YEAST (P23641) Mitochondrial phosphate carrier protein (Pho... 28 4.1
9RISB_SALTY (P66038) 6,7-dimethyl-8-ribityllumazine synthase (EC ... 28 5.3
10RISB_SALTI (P66039) 6,7-dimethyl-8-ribityllumazine synthase (EC ... 28 5.3
11VTU2_DROME (P13238) Vitelline membrane protein Vm26Ab precursor ... 28 5.3

>PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (Phosphate|
           transport protein 2) (PTP 2) (mPic 2) (Pi carrier
           isoform 2)
          Length = 300

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = +2

Query: 290 KIVMYSPAFYAACTXGGIASCGLTHMAVTPLDLV 391
           KI +Y+  FYA CT GGI +CG TH ++TPLDLV
Sbjct: 9   KIQLYTKEFYATCTLGGIIACGPTHSSITPLDLV 42



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>MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 356

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +2

Query: 305 SPAFYAACTXGGIASCGLTHMAVTPLDLV 391
           S  +YA C  GG+ SCGLTH AV PLDLV
Sbjct: 55  SMKYYALCGFGGVLSCGLTHTAVVPLDLV 83



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>MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial precursor (PTP)|
          Length = 340

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 19/41 (46%), Positives = 27/41 (65%)
 Frame = +2

Query: 269 SIRAPNEKIVMYSPAFYAACTXGGIASCGLTHMAVTPLDLV 391
           ++ AP + +   S  +YA C  GG+ SCG+TH A+ PLDLV
Sbjct: 28  AVSAPGQ-VEFGSGKYYAYCALGGVLSCGITHTAIVPLDLV 67



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>MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 357

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +2

Query: 305 SPAFYAACTXGGIASCGLTHMAVTPLDLV 391
           S  +YA C  GG+ SCGLTH AV PLDLV
Sbjct: 56  SMKYYALCGFGGVLSCGLTHTAVVPLDLV 84



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>MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial precursor|
           (Phosphate transport protein) (PTP)
          Length = 349

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +2

Query: 305 SPAFYAACTXGGIASCGLTHMAVTPLDLV 391
           S  ++A C  GGI SCG+TH AV PLDLV
Sbjct: 45  STKYFALCGLGGILSCGITHTAVVPLDLV 73



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>MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 362

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +2

Query: 305 SPAFYAACTXGGIASCGLTHMAVTPLDLV 391
           S  F+  C  GGI SCG TH A+ PLDLV
Sbjct: 61  SGRFFILCGLGGIISCGTTHTALVPLDLV 89



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>MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 362

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +2

Query: 305 SPAFYAACTXGGIASCGLTHMAVTPLDLV 391
           S  F+  C  GGI SCG TH A+ PLDLV
Sbjct: 61  SGRFFILCGLGGIISCGTTHTALVPLDLV 89



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>MPCP_YEAST (P23641) Mitochondrial phosphate carrier protein (Phosphate|
           transport protein) (PTP) (mPic 1) (Mitochondrial import
           receptor) (p32)
          Length = 311

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 293 IVMYSPAFYAACTXGGIASCGLTHMAVTPLDLV 391
           I  YS + Y      G   CG TH ++ P+D+V
Sbjct: 9   IPQYSVSDYMKFALAGAIGCGSTHSSMVPIDVV 41



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>RISB_SALTY (P66038) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL|
           synthase) (Lumazine synthase) (Riboflavin synthase beta
           chain)
          Length = 156

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 387 RSSGVTAMWVRPQLAIPPXVQAA*KAGEYMTIFSLGARIEKG 262
           +   +T +WV     +P   +A  K+G+Y  + +LG  I  G
Sbjct: 45  KDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGG 86



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>RISB_SALTI (P66039) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL|
           synthase) (Lumazine synthase) (Riboflavin synthase beta
           chain)
          Length = 156

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 387 RSSGVTAMWVRPQLAIPPXVQAA*KAGEYMTIFSLGARIEKG 262
           +   +T +WV     +P   +A  K+G+Y  + +LG  I  G
Sbjct: 45  KDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGG 86



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>VTU2_DROME (P13238) Vitelline membrane protein Vm26Ab precursor (Protein TU-4)|
           (Protein SV23)
          Length = 168

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 50  PRESAPGSLGPAAMAXXXXXXXXXXXXXXYSSPAARSFTAPRFPSSPSP 196
           P  SAP +    A +              YS+PAA +++AP  P+  +P
Sbjct: 59  PSYSAPAAPAAQAYSAPAAPAYSAPAAPAYSAPAAPAYSAPAAPAYSAP 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.308    0.131    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,097,273
Number of Sequences: 219361
Number of extensions: 229798
Number of successful extensions: 355
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
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