ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart49h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CV106_HUMAN (Q6P0N0) Protein C14orf106 (P243) 34 0.33

>CV106_HUMAN (Q6P0N0) Protein C14orf106 (P243)|
          Length = 1132

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = +2

Query: 260 WPVRLKGEERKLAVSG--FTEKNYLFTSAPIAQRYESLTLQDEDGVVVLLYGSFSLLRMR 433
           W ++       + V G      N  + S  I +R E   L+   G V +L G    + M+
Sbjct: 388 WMIKSINNNTAICVEGKLIDVTNIYWHSNVIIERIEHNKLRTISGNVYILKGMIDQISMK 447

Query: 434 ENGFSMQICEQFMIGFP 484
           E G+   +  +FM GFP
Sbjct: 448 EAGYPNYLIRKFMFGFP 464


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,255,996
Number of Sequences: 219361
Number of extensions: 1337476
Number of successful extensions: 3111
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3110
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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