Clone Name | bart49g09 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_195166.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase (OSJNBa0047G15.18), mRNA Length = 1587 Score = 200 bits (101), Expect = 3e-48 Identities = 200/233 (85%) Strand = Plus / Plus Query: 105 aggagctgcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtgg 164 ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 23 aggagctccacttcttgctggtgccgctggtggcgcagggccacatcatccctatggtgg 82 Query: 165 acgtggcgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccacgcccgtca 224 || |||||||||||||||||| |||||| |||| |||| |||||||||||||| |||| Sbjct: 83 acctggcgcgcctcctcgccggccgcggcgcgcgcgtcacggtggtcaccacgccggtca 142 Query: 225 acgccgcgcgcaacagggccaccgtcgacggcgccaggagggccggtctcgccgtcgagt 284 ||||||||||||||||||| ||||||| || || || ||| || |||||||||||| Sbjct: 143 acgccgcgcgcaacagggcggccgtcgagggagcgcggcggggagggctcgccgtcgagc 202 Query: 285 tcgtcgagctcccctttccctgcgcgcagctcggcctaccggagggggtggag 337 ||| |||| || |||| || || || || ||||||| |||||||| |||||| Sbjct: 203 tcgccgagatcaccttcaccggcccggagttcggcctgccggagggcgtggag 255
>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0047G15, from chromosome 10, complete sequence Length = 166474 Score = 200 bits (101), Expect = 3e-48 Identities = 200/233 (85%) Strand = Plus / Plus Query: 105 aggagctgcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtgg 164 ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 68622 aggagctccacttcttgctggtgccgctggtggcgcagggccacatcatccctatggtgg 68681 Query: 165 acgtggcgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccacgcccgtca 224 || |||||||||||||||||| |||||| |||| |||| |||||||||||||| |||| Sbjct: 68682 acctggcgcgcctcctcgccggccgcggcgcgcgcgtcacggtggtcaccacgccggtca 68741 Query: 225 acgccgcgcgcaacagggccaccgtcgacggcgccaggagggccggtctcgccgtcgagt 284 ||||||||||||||||||| ||||||| || || || ||| || |||||||||||| Sbjct: 68742 acgccgcgcgcaacagggcggccgtcgagggagcgcggcggggagggctcgccgtcgagc 68801 Query: 285 tcgtcgagctcccctttccctgcgcgcagctcggcctaccggagggggtggag 337 ||| |||| || |||| || || || || ||||||| |||||||| |||||| Sbjct: 68802 tcgccgagatcaccttcaccggcccggagttcggcctgccggagggcgtggag 68854
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 200 bits (101), Expect = 3e-48 Identities = 200/233 (85%) Strand = Plus / Plus Query: 105 aggagctgcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtgg 164 ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5063321 aggagctccacttcttgctggtgccgctggtggcgcagggccacatcatccctatggtgg 5063380 Query: 165 acgtggcgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccacgcccgtca 224 || |||||||||||||||||| |||||| |||| |||| |||||||||||||| |||| Sbjct: 5063381 acctggcgcgcctcctcgccggccgcggcgcgcgcgtcacggtggtcaccacgccggtca 5063440 Query: 225 acgccgcgcgcaacagggccaccgtcgacggcgccaggagggccggtctcgccgtcgagt 284 ||||||||||||||||||| ||||||| || || || ||| || |||||||||||| Sbjct: 5063441 acgccgcgcgcaacagggcggccgtcgagggagcgcggcggggagggctcgccgtcgagc 5063500 Query: 285 tcgtcgagctcccctttccctgcgcgcagctcggcctaccggagggggtggag 337 ||| |||| || |||| || || || || ||||||| |||||||| |||||| Sbjct: 5063501 tcgccgagatcaccttcaccggcccggagttcggcctgccggagggcgtggag 5063553
>dbj|AK066178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P11, full insert sequence Length = 1717 Score = 200 bits (101), Expect = 3e-48 Identities = 200/233 (85%) Strand = Plus / Plus Query: 105 aggagctgcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtgg 164 ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 49 aggagctccacttcttgctggtgccgctggtggcgcagggccacatcatccctatggtgg 108 Query: 165 acgtggcgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccacgcccgtca 224 || |||||||||||||||||| |||||| |||| |||| |||||||||||||| |||| Sbjct: 109 acctggcgcgcctcctcgccggccgcggcgcgcgcgtcacggtggtcaccacgccggtca 168 Query: 225 acgccgcgcgcaacagggccaccgtcgacggcgccaggagggccggtctcgccgtcgagt 284 ||||||||||||||||||| ||||||| || || || ||| || |||||||||||| Sbjct: 169 acgccgcgcgcaacagggcggccgtcgagggagcgcggcggggagggctcgccgtcgagc 228 Query: 285 tcgtcgagctcccctttccctgcgcgcagctcggcctaccggagggggtggag 337 ||| |||| || |||| || || || || ||||||| |||||||| |||||| Sbjct: 229 tcgccgagatcaccttcaccggcccggagttcggcctgccggagggcgtggag 281
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 200 bits (101), Expect = 3e-48 Identities = 200/233 (85%) Strand = Plus / Plus Query: 105 aggagctgcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtgg 164 ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5064108 aggagctccacttcttgctggtgccgctggtggcgcagggccacatcatccctatggtgg 5064167 Query: 165 acgtggcgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccacgcccgtca 224 || |||||||||||||||||| |||||| |||| |||| |||||||||||||| |||| Sbjct: 5064168 acctggcgcgcctcctcgccggccgcggcgcgcgcgtcacggtggtcaccacgccggtca 5064227 Query: 225 acgccgcgcgcaacagggccaccgtcgacggcgccaggagggccggtctcgccgtcgagt 284 ||||||||||||||||||| ||||||| || || || ||| || |||||||||||| Sbjct: 5064228 acgccgcgcgcaacagggcggccgtcgagggagcgcggcggggagggctcgccgtcgagc 5064287 Query: 285 tcgtcgagctcccctttccctgcgcgcagctcggcctaccggagggggtggag 337 ||| |||| || |||| || || || || ||||||| |||||||| |||||| Sbjct: 5064288 tcgccgagatcaccttcaccggcccggagttcggcctgccggagggcgtggag 5064340
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 168 bits (85), Expect = 1e-38 Identities = 202/241 (83%) Strand = Plus / Minus Query: 97 gatgccggaggagctgcacttcgtgctggtgccgctggtggcgcagggccacatcatccc 156 |||| ||| |||||| || ||| || ||||||||||| | |||||||||||||||||||| Sbjct: 3915275 gatggcggcggagctccatttcttggtggtgccgctgatagcgcagggccacatcatccc 3915216 Query: 157 catggtggacgtggcgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccac 216 ||||||||| |||||||||||||||||||| |||||| |||| | || ||| |||||||| Sbjct: 3915215 catggtggaggtggcgcgcctcctcgccgcccgcggcgcgcgcgccaccgtcgtcaccac 3915156 Query: 217 gcccgtcaacgccgcgcgcaacagggccaccgtcgacggcgccaggagggccggtctcgc 276 |||||||||||||||||||||| ||||| |||| || | |||| | | | ||| ||||| Sbjct: 3915155 gcccgtcaacgccgcgcgcaacggggccgccgtggaggccgcccgccgcgacggcctcgc 3915096 Query: 277 cgtcgagttcgtcgagctcccctttccctgcgcgcagctcggcctaccggagggggtgga 336 |||||| ||| |||| || |||| ||| || || || ||||| | ||||||||| |||| Sbjct: 3915095 cgtcgacctcgccgaggtcgccttccccggcccggagttcggcgtgccggaggggctgga 3915036 Query: 337 g 337 | Sbjct: 3915035 g 3915035 Score = 65.9 bits (33), Expect = 1e-07 Identities = 101/123 (82%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtggacgtggc 171 ||||||||||||||| ||| || |||||||||||||| |||||||||| ||| |||| Sbjct: 3917157 gcacttcgtgctggtcccgatgatggcgcagggccacgccatccccatgaccgacatggc 3917216 Query: 172 gcgcctcctcgccgcgcgcggc---ccgcgggtcagcgtggtcaccacgcccgtcaacgc 228 |||||| || |||| || |||| ||||||||||| | ||| |||||| |||||||| Sbjct: 3917217 gcgcctgctggccgagcacggcgcggcgcgggtcagcctcgtcgtcacgccggtcaacgc 3917276 Query: 229 cgc 231 ||| Sbjct: 3917277 cgc 3917279 Score = 63.9 bits (32), Expect = 4e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 111 tgcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtggacgtgg 170 |||||||||||||||| ||| || |||||||||| |||| |||||||||| ||| ||| Sbjct: 3920423 tgcacttcgtgctggtcccgatgatggcgcaggggcacaccatccccatgaccgacatgg 3920482 Query: 171 cgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccacgcccgtcaacgccg 230 | ||||| || |||| || |||| | | | ||||| | |||||||| || |||||||||| Sbjct: 3920483 cccgcctgctggccgagcacggcgctcagatcagcctcgtcaccactccggtcaacgccg 3920542 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatg 160 ||||||||||||||| ||| || |||||||||| ||||| ||||||||| Sbjct: 3923489 gcacttcgtgctggtcccgatgatggcgcagggacacatgatccccatg 3923537 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 429 tccgggcgctgccgcgccggccggtctgcctcgtcg 464 ||||||||||||| ||||| |||| ||||||||||| Sbjct: 3914943 tccgggcgctgcctcgccgcccggactgcctcgtcg 3914908 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tctcgccgtcgagttcgtcga 291 ||||||||||||||||||||| Sbjct: 25364077 tctcgccgtcgagttcgtcga 25364057 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 cgcactgactagctagctag 65 |||||||||||||||||||| Sbjct: 31238976 cgcactgactagctagctag 31238957
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 168 bits (85), Expect = 1e-38 Identities = 202/241 (83%) Strand = Plus / Minus Query: 97 gatgccggaggagctgcacttcgtgctggtgccgctggtggcgcagggccacatcatccc 156 |||| ||| |||||| || ||| || ||||||||||| | |||||||||||||||||||| Sbjct: 37179 gatggcggcggagctccatttcttggtggtgccgctgatagcgcagggccacatcatccc 37120 Query: 157 catggtggacgtggcgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccac 216 ||||||||| |||||||||||||||||||| |||||| |||| | || ||| |||||||| Sbjct: 37119 catggtggaggtggcgcgcctcctcgccgcccgcggcgcgcgcgccaccgtcgtcaccac 37060 Query: 217 gcccgtcaacgccgcgcgcaacagggccaccgtcgacggcgccaggagggccggtctcgc 276 |||||||||||||||||||||| ||||| |||| || | |||| | | | ||| ||||| Sbjct: 37059 gcccgtcaacgccgcgcgcaacggggccgccgtggaggccgcccgccgcgacggcctcgc 37000 Query: 277 cgtcgagttcgtcgagctcccctttccctgcgcgcagctcggcctaccggagggggtgga 336 |||||| ||| |||| || |||| ||| || || || ||||| | ||||||||| |||| Sbjct: 36999 cgtcgacctcgccgaggtcgccttccccggcccggagttcggcgtgccggaggggctgga 36940 Query: 337 g 337 | Sbjct: 36939 g 36939 Score = 65.9 bits (33), Expect = 1e-07 Identities = 101/123 (82%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtggacgtggc 171 ||||||||||||||| ||| || |||||||||||||| |||||||||| ||| |||| Sbjct: 39061 gcacttcgtgctggtcccgatgatggcgcagggccacgccatccccatgaccgacatggc 39120 Query: 172 gcgcctcctcgccgcgcgcggc---ccgcgggtcagcgtggtcaccacgcccgtcaacgc 228 |||||| || |||| || |||| ||||||||||| | ||| |||||| |||||||| Sbjct: 39121 gcgcctgctggccgagcacggcgcggcgcgggtcagcctcgtcgtcacgccggtcaacgc 39180 Query: 229 cgc 231 ||| Sbjct: 39181 cgc 39183 Score = 63.9 bits (32), Expect = 4e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 111 tgcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtggacgtgg 170 |||||||||||||||| ||| || |||||||||| |||| |||||||||| ||| ||| Sbjct: 42327 tgcacttcgtgctggtcccgatgatggcgcaggggcacaccatccccatgaccgacatgg 42386 Query: 171 cgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccacgcccgtcaacgccg 230 | ||||| || |||| || |||| | | | ||||| | |||||||| || |||||||||| Sbjct: 42387 cccgcctgctggccgagcacggcgctcagatcagcctcgtcaccactccggtcaacgccg 42446 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatg 160 ||||||||||||||| ||| || |||||||||| ||||| ||||||||| Sbjct: 45393 gcacttcgtgctggtcccgatgatggcgcagggacacatgatccccatg 45441 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 429 tccgggcgctgccgcgccggccggtctgcctcgtcg 464 ||||||||||||| ||||| |||| ||||||||||| Sbjct: 36847 tccgggcgctgcctcgccgcccggactgcctcgtcg 36812
>ref|XM_464571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1527 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgcgcggccc 195 |||||||||||||| |||||||||||| ||| | |||||||||||||| | ||||||| Sbjct: 72 ggcgcagggccacaccatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgt 131 Query: 196 gcgggtcagcgtggtcaccacgcccgtcaacgccgcgcgc 235 || | |||| | ||| ||||||||| |||||||||||| Sbjct: 132 ccgcgccagcctcgtcgtcacgcccgtgaacgccgcgcgc 171
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgcgcggccc 195 |||||||||||||| |||||||||||| ||| | |||||||||||||| | ||||||| Sbjct: 6017884 ggcgcagggccacaccatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgt 6017825 Query: 196 gcgggtcagcgtggtcaccacgcccgtcaacgccgcgcgc 235 || | |||| | ||| ||||||||| |||||||||||| Sbjct: 6017824 ccgcgccagcctcgtcgtcacgcccgtgaacgccgcgcgc 6017785 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgcgcggccc 195 |||||||||||||| |||||||||||| ||| | |||||||||||||| | ||||||| | Sbjct: 5978923 ggcgcagggccacaccatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgc 5978864 Query: 196 gcgggtcagcgtggtcaccacgcccgtcaacgccgcgcgc 235 || | |||| | || ||||||||| |||||||||||| Sbjct: 5978863 ccgcgccagcctcctcgtcacgcccgtgaacgccgcgcgc 5978824 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgcgcggccc 195 |||||| ||||||| ||||||||||| ||| | |||||||||||||| | ||||||| | Sbjct: 6006864 ggcgcaaggccacacaatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgc 6006923 Query: 196 gcgggtcagcgtggtcaccacgcccgtcaacgccgcgc 233 || | |||| | ||| ||||||||| |||||||||| Sbjct: 6006924 ccgcgccagcctcgtcgtcacgcccgtgaacgccgcgc 6006961 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgc 188 |||||| || ||| ||||||||||||| || | ||| ||||||||||||||| Sbjct: 5967571 ggcgcacggtcacgtcatccccatggtcgatctcgcgggcctcctcgccgcgc 5967519 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgc 188 |||||| || ||| ||||||||||||| || | ||| ||||||||||||||| Sbjct: 5957176 ggcgcacggtcacctcatccccatggtcgatctcgcgggcctcctcgccgcgc 5957124 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtggcgcgcctcctcgccgc 186 |||||||||||||||||||| Sbjct: 4722229 gtggcgcgcctcctcgccgc 4722210
>dbj|AP005917.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0235A04 Length = 23787 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgcgcggccc 195 |||||||||||||| |||||||||||| ||| | |||||||||||||| | ||||||| | Sbjct: 9305 ggcgcagggccacaccatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgc 9246 Query: 196 gcgggtcagcgtggtcaccacgcccgtcaacgccgcgcgc 235 || | |||| | || ||||||||| |||||||||||| Sbjct: 9245 ccgcgccagcctcctcgtcacgcccgtgaacgccgcgcgc 9206
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgcgcggccc 195 |||||||||||||| |||||||||||| ||| | |||||||||||||| | ||||||| Sbjct: 38723 ggcgcagggccacaccatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgt 38664 Query: 196 gcgggtcagcgtggtcaccacgcccgtcaacgccgcgcgc 235 || | |||| | ||| ||||||||| |||||||||||| Sbjct: 38663 ccgcgccagcctcgtcgtcacgcccgtgaacgccgcgcgc 38624 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgcgcggccc 195 |||||| ||||||| ||||||||||| ||| | |||||||||||||| | ||||||| | Sbjct: 27703 ggcgcaaggccacacaatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgc 27762 Query: 196 gcgggtcagcgtggtcaccacgcccgtcaacgccgcgc 233 || | |||| | ||| ||||||||| |||||||||| Sbjct: 27763 ccgcgccagcctcgtcgtcacgcccgtgaacgccgcgc 27800
>ref|NM_191604.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1810 Score = 65.9 bits (33), Expect = 1e-07 Identities = 101/123 (82%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtggacgtggc 171 ||||||||||||||| ||| || |||||||||||||| |||||||||| ||| |||| Sbjct: 243 gcacttcgtgctggtcccgatgatggcgcagggccacgccatccccatgaccgacatggc 302 Query: 172 gcgcctcctcgccgcgcgcggc---ccgcgggtcagcgtggtcaccacgcccgtcaacgc 228 |||||| || |||| || |||| ||||||||||| | ||| |||||| |||||||| Sbjct: 303 gcgcctgctggccgagcacggcgcggcgcgggtcagcctcgtcgtcacgccggtcaacgc 362 Query: 229 cgc 231 ||| Sbjct: 363 cgc 365
>dbj|AK103303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125D02, full insert sequence Length = 1809 Score = 65.9 bits (33), Expect = 1e-07 Identities = 101/123 (82%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtggacgtggc 171 ||||||||||||||| ||| || |||||||||||||| |||||||||| ||| |||| Sbjct: 242 gcacttcgtgctggtcccgatgatggcgcagggccacgccatccccatgaccgacatggc 301 Query: 172 gcgcctcctcgccgcgcgcggc---ccgcgggtcagcgtggtcaccacgcccgtcaacgc 228 |||||| || |||| || |||| ||||||||||| | ||| |||||| |||||||| Sbjct: 302 gcgcctgctggccgagcacggcgcggcgcgggtcagcctcgtcgtcacgccggtcaacgc 361 Query: 229 cgc 231 ||| Sbjct: 362 cgc 364
>ref|NM_191605.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 63.9 bits (32), Expect = 4e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 111 tgcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtggacgtgg 170 |||||||||||||||| ||| || |||||||||| |||| |||||||||| ||| ||| Sbjct: 68 tgcacttcgtgctggtcccgatgatggcgcaggggcacaccatccccatgaccgacatgg 127 Query: 171 cgcgcctcctcgccgcgcgcggcccgcgggtcagcgtggtcaccacgcccgtcaacgccg 230 | ||||| || |||| || |||| | | | ||||| | |||||||| || |||||||||| Sbjct: 128 cccgcctgctggccgagcacggcgctcagatcagcctcgtcaccactccggtcaacgccg 187
>ref|XM_464569.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1929 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgcgcggccc 195 |||||| ||||||| ||||||||||| ||| | |||||||||||||| | ||||||| | Sbjct: 142 ggcgcaaggccacacaatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgc 201 Query: 196 gcgggtcagcgtggtcaccacgcccgtcaacgccgcgc 233 || | |||| | ||| ||||||||| |||||||||| Sbjct: 202 ccgcgccagcctcgtcgtcacgcccgtgaacgccgcgc 239
>dbj|AK119766.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-D06, full insert sequence Length = 1929 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgcgcggccc 195 |||||| ||||||| ||||||||||| ||| | |||||||||||||| | ||||||| | Sbjct: 142 ggcgcaaggccacacaatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgc 201 Query: 196 gcgggtcagcgtggtcaccacgcccgtcaacgccgcgc 233 || | |||| | ||| ||||||||| |||||||||| Sbjct: 202 ccgcgccagcctcgtcgtcacgcccgtgaacgccgcgc 239
>ref|NM_191606.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1687 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatg 160 ||||||||||||||| ||| || |||||||||| ||||| ||||||||| Sbjct: 91 gcacttcgtgctggtcccgatgatggcgcagggacacatgatccccatg 139
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 113 cacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtggacgtggcg 172 ||||||||||| |||||||| ||||||||| || ||||||| ||| ||||| ||||| Sbjct: 79492 cacttcgtgctcgtgccgctcccggcgcagggacatgtcatcccgatgatggacatggcg 79433 Query: 173 cgcctcctcgccg 185 |||||| |||||| Sbjct: 79432 cgcctcatcgccg 79420 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Minus Query: 413 ccgctggaggagtacctccgggcgctgccgcgccggccggtctgcctcgtcg 464 ||||| |||| || |||||| ||||||||||| ||||||| |||| |||||| Sbjct: 79189 ccgctcgaggcgttcctccgcgcgctgccgcggcggccggactgcgtcgtcg 79138
>gb|AY625694.1| Oryza sativa (japonica cultivar-group) glucosyl transferase mRNA, complete cds Length = 1567 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatg 160 ||||||||||||||| ||| || |||||||||| ||||| ||||||||| Sbjct: 77 gcacttcgtgctggtcccgatgatggcgcagggacacatgatccccatg 125
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 113 cacttcgtgctggtgccgctggtggcgcagggccacatcatccccatggtggacgtggcg 172 ||||||||||| |||||||| ||||||||| || ||||||| ||| ||||| ||||| Sbjct: 4569025 cacttcgtgctcgtgccgctcccggcgcagggacatgtcatcccgatgatggacatggcg 4568966 Query: 173 cgcctcctcgccg 185 |||||| |||||| Sbjct: 4568965 cgcctcatcgccg 4568953 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Minus Query: 413 ccgctggaggagtacctccgggcgctgccgcgccggccggtctgcctcgtcg 464 ||||| |||| || |||||| ||||||||||| ||||||| |||| |||||| Sbjct: 4568722 ccgctcgaggcgttcctccgcgcgctgccgcggcggccggactgcgtcgtcg 4568671
>dbj|AK102335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091A13, full insert sequence Length = 1686 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatg 160 ||||||||||||||| ||| || |||||||||| ||||| ||||||||| Sbjct: 90 gcacttcgtgctggtcccgatgatggcgcagggacacatgatccccatg 138
>dbj|AK064351.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-A07, full insert sequence Length = 1725 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatg 160 ||||||||||||||| ||| || |||||||||| ||||| ||||||||| Sbjct: 63 gcacttcgtgctggtcccgatgatggcgcagggacacatgatccccatg 111
>gb|BT009372.1| Triticum aestivum clone wlm96.pk028.k4:fis, full insert mRNA sequence Length = 1736 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 112 gcacttcgtgctggtgccgctggtggcgcagggccacatcatccccatg 160 ||||||||||||||| ||| || |||| |||||||| | |||||||||| Sbjct: 121 gcacttcgtgctggtaccgatgatggctcagggccataccatccccatg 169
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 gtctcgccgtcgagttcgtcgagctc 295 |||||||||||||| ||||||||||| Sbjct: 2508158 gtctcgccgtcgagctcgtcgagctc 2508133
>gb|AC073367.11| Homo sapiens chromosome 10 clone RP11-197M22, complete sequence Length = 168920 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 140 cagggccacatcatccccatgg 161 |||||||||||||||||||||| Sbjct: 75900 cagggccacatcatccccatgg 75879
>gb|AF101045.1| Oryza sativa (japonica cultivar-group) putative ADP-glucose pyrophosphorylase subunit SH2 and putative transcription factor X1, putative transcription factor X2 and putative NADPH-dependent reductase A1 genes, complete cds Length = 29877 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tctcgccgtcgagttcgtcga 291 ||||||||||||||||||||| Sbjct: 12304 tctcgccgtcgagttcgtcga 12284
>gb|U70541.1|OSU70541 Oryza sativa (indica cultivar-group) putative ADP-glucose pyrophosphorylase subunit SH2 and putative NADPH-dependent reductase A1 genes, complete cds Length = 30034 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tctcgccgtcgagttcgtcga 291 ||||||||||||||||||||| Sbjct: 12305 tctcgccgtcgagttcgtcga 12285
>gb|AF380355.1|AF380355 Oryctolagus cuniculus aldosterone synthase (CYP11B2) mRNA, partial cds Length = 434 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 tcatccccatggtggacgtgg 170 ||||||||||||||||||||| Sbjct: 287 tcatccccatggtggacgtgg 307
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cttcgtgctggtgccgctggt 135 ||||||||||||||||||||| Sbjct: 4046607 cttcgtgctggtgccgctggt 4046627
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cctcgccgcgcgcggcccgcg 198 ||||||||||||||||||||| Sbjct: 3542230 cctcgccgcgcgcggcccgcg 3542250 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cctcgccgcgcgcggcccgcg 198 ||||||||||||||||||||| Sbjct: 593479 cctcgccgcgcgcggcccgcg 593459 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cgcctcctcgccgcgcgcgg 192 |||||||||||||||||||| Sbjct: 3290014 cgcctcctcgccgcgcgcgg 3289995
>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10 Length = 162297 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tctcgccgtcgagttcgtcga 291 ||||||||||||||||||||| Sbjct: 54077 tctcgccgtcgagttcgtcga 54057
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgc 188 |||||| || ||| ||||||||||||| || | ||| ||||||||||||||| Sbjct: 145792 ggcgcacggtcacgtcatccccatggtcgatctcgcgggcctcctcgccgcgc 145740 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgc 188 |||||| || ||| ||||||||||||| || | ||| ||||||||||||||| Sbjct: 135397 ggcgcacggtcacctcatccccatggtcgatctcgcgggcctcctcgccgcgc 135345
>dbj|AK066593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073P05, full insert sequence Length = 1795 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgc 188 |||||| || ||| ||||||||||||| || | ||| ||||||||||||||| Sbjct: 84 ggcgcacggtcacctcatccccatggtcgatctcgcgggcctcctcgccgcgc 136
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 268 cggtctcgccgtcgagttcgtcgag 292 |||||||||| |||||||||||||| Sbjct: 3071293 cggtctcgccttcgagttcgtcgag 3071269
>dbj|AK066469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067D15, full insert sequence Length = 1999 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 136 ggcgcagggccacatcatccccatggtggacgtggcgcgcctcctcgccgcgc 188 |||||| || ||| ||||||||||||| || | ||| ||||||||||||||| Sbjct: 102 ggcgcacggtcacctcatccccatggtcgatctcgcgggcctcctcgccgcgc 154
>gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057F07 map near 50283S, complete sequence Length = 139827 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 ccggaggagctgcacttcgtgctg 124 |||||||| ||||||||||||||| Sbjct: 35388 ccggaggacctgcacttcgtgctg 35365
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 gtctcgccgtcgagttcgtcgagc 293 |||||||||||||| ||||||||| Sbjct: 3676527 gtctcgccgtcgagctcgtcgagc 3676550
>gb|AC005153.2| Homo sapiens PAC clone RP4-537P9 from 7, complete sequence Length = 124191 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cggcctaccggagggggtgg 335 |||||||||||||||||||| Sbjct: 63562 cggcctaccggagggggtgg 63543
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ttcgtgctggtgccgctggt 135 |||||||||||||||||||| Sbjct: 3170084 ttcgtgctggtgccgctggt 3170103
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gccgtcgatggcgatgccgg 104 |||||||||||||||||||| Sbjct: 916428 gccgtcgatggcgatgccgg 916409
>emb|BX069334.1|CNS09PNU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC53DH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 683 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 124 gtgctggtgccgctggtggc 143
>emb|BX055669.1|CNS09F49 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC34BE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 483 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 94 gtgctggtgccgctggtggc 113
>emb|BX022423.1|CNS08PGR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA34BD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 925 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 108 gtgctggtgccgctggtggc 127
>emb|BX025824.1|CNS08S38 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA39CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 946 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 120 gtgctggtgccgctggtggc 139
>emb|BX021060.1|CNS08OEW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA31AG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 465 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 108 gtgctggtgccgctggtggc 127
>emb|BX018709.1|CNS08MLL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA28BF08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1013 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 108 gtgctggtgccgctggtggc 127
>emb|BX015100.1|CNS08JTC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA22CG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 391 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 118 gtgctggtgccgctggtggc 137
>emb|BX009488.1|CNS08FHG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15BE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1049 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 106 gtgctggtgccgctggtggc 125
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 acttcgtgctggtgccgctg 133 |||||||||||||||||||| Sbjct: 1570902 acttcgtgctggtgccgctg 1570921
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cggtctcgccgtcgagttcg 287 |||||||||||||||||||| Sbjct: 1360833 cggtctcgccgtcgagttcg 1360852
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 tccgggcgctgccgcgccgg 448 |||||||||||||||||||| Sbjct: 72196 tccgggcgctgccgcgccgg 72177
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 gtctcgccgtcgagttcgtcgagc 293 |||||||||||||| ||||||||| Sbjct: 3417617 gtctcgccgtcgagctcgtcgagc 3417640
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcgcctcctcgccgcgcgc 190 |||||||||||||||||||| Sbjct: 267535 cgcgcctcctcgccgcgcgc 267554
>gb|DQ397585.1| Cenarchaeum symbiosum clone C20G08, complete sequence Length = 40803 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ggccacatcatccccatggtggac 166 ||||||||| |||||||||||||| Sbjct: 19948 ggccacatcctccccatggtggac 19925
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ggcgatgccggaggagctgc 113 |||||||||||||||||||| Sbjct: 4125991 ggcgatgccggaggagctgc 4125972
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 agctgccgtcgatggcgatg 100 |||||||||||||||||||| Sbjct: 973673 agctgccgtcgatggcgatg 973654
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cggtctcgccgtcgagttcg 287 |||||||||||||||||||| Sbjct: 35405 cggtctcgccgtcgagttcg 35424
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 ccggaggagctgcacttcgtgctg 124 |||||||| ||||||||||||||| Sbjct: 14210906 ccggaggacctgcacttcgtgctg 14210929
>gb|AY427516.1| Pupa solidula 18S ribosomal RNA gene, complete sequence Length = 1842 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcgccgcgcgcggcccgcgg 199 |||||||||||||||||||| Sbjct: 203 tcgccgcgcgcggcccgcgg 222
>gb|AC079612.6| Homo sapiens BAC clone RP11-314A6 from 2, complete sequence Length = 118368 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ccagatggcagggctcgagc 365 |||||||||||||||||||| Sbjct: 46098 ccagatggcagggctcgagc 46079
>gb|U72662.2|MEU72662 Methylobacterium extorquens methylotrophy region containing methylotrophic phosphoenolpyruvate carboxylase (ppcA), malyl-CoA lyase (mclA), orf1, orf2, putative ABC transporter subunit A (abcA), putative ABC transporter subunit B (abcB), putative ABC transporter ATP-binding subunit (abcC), methanol dehydrogenase large subunit homolog (mxaF'), cytochrome c (maxG'), mxaJ homolog (mxaJ'), 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase (folA), dihydroneopterin aldolase (folB), dihydroxypteroate synthase (folC), orf3, orf4, and PqqE (pqqE) genes, complete cds; and PqqC/D (pqqC/D) gene, partial cds Length = 17877 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cttcgtgctggtgccgctgg 134 |||||||||||||||||||| Sbjct: 13147 cttcgtgctggtgccgctgg 13128
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 cgcactgactagctagctag 65 |||||||||||||||||||| Sbjct: 165321 cgcactgactagctagctag 165302
>gb|AC091656.3| Rattus norvegicus strain Brown Norway clone RP31-236J24, complete sequence Length = 132420 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gcagggccacatcatcccca 158 |||||||||||||||||||| Sbjct: 48875 gcagggccacatcatcccca 48856
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtggcgcgcctcctcgccgc 186 |||||||||||||||||||| Sbjct: 2819 gtggcgcgcctcctcgccgc 2800
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cttcgtgctggtgccgctgg 134 |||||||||||||||||||| Sbjct: 2802718 cttcgtgctggtgccgctgg 2802737
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cttcgtgctggtgccgctgg 134 |||||||||||||||||||| Sbjct: 3376183 cttcgtgctggtgccgctgg 3376164
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ctcgccgtcgagttcgtcga 291 |||||||||||||||||||| Sbjct: 2324678 ctcgccgtcgagttcgtcga 2324659
>ref|XM_551896.1| Anopheles gambiae str. PEST ENSANGP00000028190 (ENSANGG00000021922), mRNA Length = 1868 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 112 gtgctggtgccgctggtggc 131
>ref|XM_307216.2| Anopheles gambiae str. PEST ENSANGP00000023315 (ENSANGG00000001777), partial mRNA Length = 1606 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgctggtgccgctggtggc 138 |||||||||||||||||||| Sbjct: 107 gtgctggtgccgctggtggc 126
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 acttcgtgctggtgccgctg 133 |||||||||||||||||||| Sbjct: 4946634 acttcgtgctggtgccgctg 4946653
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ggcgctgccgcgccggccgg 452 |||||||||||||||||||| Sbjct: 3389861 ggcgctgccgcgccggccgg 3389842
>gb|AY105877.1| Zea mays PCO119646 mRNA sequence Length = 964 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tcgagttcgtcgagctcccc 298 |||||||||||||||||||| Sbjct: 316 tcgagttcgtcgagctcccc 297
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 170 gcgcgcctcctcgccgcgcgcggcccgc 197 ||||||| |||||||| ||||||||||| Sbjct: 467266 gcgcgccgcctcgccgagcgcggcccgc 467239
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cgtgctggtgccgctggtgg 137 |||||||||||||||||||| Sbjct: 4682910 cgtgctggtgccgctggtgg 4682891
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 ccggaggagctgcacttcgtgctg 124 |||||||| ||||||||||||||| Sbjct: 14292908 ccggaggacctgcacttcgtgctg 14292931
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tcgtgctggtgccgctggtg 136 |||||||||||||||||||| Sbjct: 1548633 tcgtgctggtgccgctggtg 1548614 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,870,581 Number of Sequences: 3902068 Number of extensions: 2870581 Number of successful extensions: 67632 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62581 Number of HSP's gapped (non-prelim): 5042 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)