>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)|
          Length = 249

 Score =  218 bits (556), Expect = 8e-57
 Identities = 111/141 (78%), Positives = 121/141 (85%), Gaps = 3/141 (2%)
 Frame = +1

Query: 193 MDAFYSTSSA---AASGWGHDSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIA 363
           MDAFYSTSSA   AASGWG+DSLKNFRQISPAVQSHLKLVYLTLC ALA+SAVGAYLH+A
Sbjct: 1   MDAFYSTSSAYGAAASGWGYDSLKNFRQISPAVQSHLKLVYLTLCVALAASAVGAYLHVA 60

Query: 364 LNIGGMLTMLACVGTIAWMFSVPVYEERKRFXXXXXXXXXXXXSVGPLIELAIDFDPSIL 543
           LNIGGMLTML CVG+IAW+FSVPV+EERKRF            SVGPLI+LA+DFD SIL
Sbjct: 61  LNIGGMLTMLGCVGSIAWLFSVPVFEERKRFGILLAAALLEGASVGPLIKLAVDFDSSIL 120

Query: 544 VTGFVGTAIAFGCFSGAAIIA 606
           VT FVGTAIAFGCF+ AAI+A
Sbjct: 121 VTAFVGTAIAFGCFTCAAIVA 141

>BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1)|
          Length = 247

 Score =  168 bits (425), Expect = 1e-41
 Identities = 84/140 (60%), Positives = 100/140 (71%), Gaps = 2/140 (1%)
 Frame = +1

Query: 193 MDAFYS--TSSAAASGWGHDSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIAL 366
           MDAF S   S   +  W +DSLKNFRQISPAVQ+HLK VYLTLC AL +SA GAYLH+  
Sbjct: 1   MDAFSSFFDSQPGSRSWSYDSLKNFRQISPAVQNHLKRVYLTLCCALVASAFGAYLHVLW 60

Query: 367 NIGGMLTMLACVGTIAWMFSVPVYEERKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILV 546
           NIGG+LT + C+GT+ W+ S P YE +KR             SVGPLI++AID DPSIL+
Sbjct: 61  NIGGILTTIGCIGTMIWLLSCPPYEHQKRLSLLFVSAVLEGASVGPLIKVAIDVDPSILI 120

Query: 547 TGFVGTAIAFGCFSGAAIIA 606
           T FVGTAIAF CFS AA++A
Sbjct: 121 TAFVGTAIAFVCFSAAAMLA 140

>BI1_PIG (Q66RM2) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)|
          Length = 237

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
 Frame = +1

Query: 244 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 417
           D+L  F  I+P+ Q HLK VY +    +  +A GAY+H+       G+L+ L  +G + W
Sbjct: 11  DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGSLGLMIW 70

Query: 418 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 591
           + + P   E  +KR              +GP ++L I  +PSIL T F+GTA+ F CF+ 
Sbjct: 71  LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTL 130

Query: 592 AAIIA 606
           +A+ A
Sbjct: 131 SALYA 135

>BI1_MOUSE (Q9D2C7) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)|
          Length = 237

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
 Frame = +1

Query: 244 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 417
           D+L  F  I+P+ Q HLK VY +    +  +A GAY+H+  +    G+L+ L  +  + W
Sbjct: 11  DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLALMIW 70

Query: 418 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 591
           + + P   E  +KR              +GP +EL I  +PSIL T F+GTA+ F CFS 
Sbjct: 71  LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAVNPSILPTAFMGTAMIFTCFSL 130

Query: 592 AAIIA 606
           +A+ A
Sbjct: 131 SALYA 135

>BI1_PAROL (Q9IA79) Probable Bax inhibitor 1 (BI-1)|
          Length = 237

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
 Frame = +1

Query: 244 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 417
           DSL  F QIS + Q HLK VY +L   +  +A G+Y+H+   +  GGML++L  +G + W
Sbjct: 11  DSLFKFSQISHSTQVHLKNVYSSLAVCMFVAAAGSYVHVVTRLFQGGMLSVLGSLGMMFW 70

Query: 418 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 591
           +   P   E  +KR              + P ++  I  +PSI+VT F+GT++ F CF+ 
Sbjct: 71  LAMTPHNSETEKKRLAILAGFAFLTGVGLCPTLDFVIAINPSIIVTAFLGTSVIFVCFTL 130

Query: 592 AAIIA 606
           +A+ A
Sbjct: 131 SALYA 135

>BI1_PONPY (Q5R7R1) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)|
          Length = 237

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
 Frame = +1

Query: 244 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 417
           D+L  F  I+P+ Q HLK VY +    +  +A GAY+H+  +    G+L+ L  +  + W
Sbjct: 11  DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLILMIW 70

Query: 418 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 591
           + + P   E  +KR              +GP +E  I  +PSIL T F+GTA+ F CF+ 
Sbjct: 71  LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCITVNPSILPTAFMGTAMIFTCFTL 130

Query: 592 AAIIA 606
           +A+ A
Sbjct: 131 SALYA 135

>BI1_RAT (P55062) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)|
          Length = 237

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
 Frame = +1

Query: 244 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 417
           D+L  F  I+P+ Q HLK VY +    +  +A GAY+H+       G+L+ L  +  +  
Sbjct: 11  DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGALALMIC 70

Query: 418 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 591
           + + P   E  +KR              +GP +EL I  +PSIL T F+GTA+ F CFS 
Sbjct: 71  LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAINPSILPTAFMGTAMIFTCFSL 130

Query: 592 AAIIA 606
           +A+ A
Sbjct: 131 SALYA 135

>BI1_HUMAN (P55061) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)|
           (Transmembrane BAX inhibitor motif-containing protein 6)
          Length = 237

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
 Frame = +1

Query: 244 DSLKNFRQISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 417
           D+L  F  I+P+ Q HLK VY +    +  +A GAY+H+  +    G+L+ L  +  + W
Sbjct: 11  DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIW 70

Query: 418 MFSVPVYEE--RKRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSG 591
           + + P   E  +KR              +GP +E  I  +PSIL T F+GTA+ F CF+ 
Sbjct: 71  LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTL 130

Query: 592 AAIIA 606
           +A+ A
Sbjct: 131 SALYA 135

>BI1_DROME (Q9VSH3) Probable Bax inhibitor 1 (BI-1)|
          Length = 245

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
 Frame = +1

Query: 274 PAVQSHLKLVYLTLCFALASSAVGAYLHIA--LNIGGMLTMLACVGTIAWMFSVPVYEER 447
           P V+ HL  VY+ L    A++A+GA L +   L++G    +LA V T+  +  +  Y++ 
Sbjct: 25  PYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLDLG----VLAAVATLVLVLGLHFYKDD 80

Query: 448 -----KRFXXXXXXXXXXXXSVGPLIELAIDFDPSILVTGFVGTAIAFGCFSGAAIIA 606
                 R             ++GPL+      +P+I+++   GT + F   S +A++A
Sbjct: 81  GKNYYTRLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTFVTFISLSLSALLA 138

>VE2_HPV41 (P27552) Regulatory protein E2|
          Length = 387

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = +3

Query: 3   RRRRHHLGSKHVRPPIHPKQRRRRKTEGEKSTPKRERRTSEEPCVRGEAAPLRFDS 170
           RRR    G      P+ P  +RRR   G +S+PK +RRT+  P  RG      F S
Sbjct: 227 RRRNEETGE-----PVAPAPKRRRGAYGRRSSPKAQRRTAASPVSRGNGGSSDFTS 277

>IF2_HAEDU (Q7VLI2) Translation initiation factor IF-2|
          Length = 839

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +3

Query: 30  KHVRPPIHP-KQRRRRKTEGEKSTPKRERRT-SEEPCVRGEAAPLR 161
           K ++PPI P KQ+   KTE +K+TPK E+   +E+   R E A LR
Sbjct: 89  KTIQPPIIPGKQKAMPKTEAKKATPKTEKIVDAEKEAKRKEEAELR 134

>TMCC1_HUMAN (O94876) Transmembrane and coiled-coil domains protein 1|
          Length = 653

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +1

Query: 28  RNTSVHPSIQSSGEGEKQKEKNPPQ-NASAGQARNLACEARPPRSDSIRRAGAGAGMDAF 204
           R TS+H     S  G+ +  K  PQ N  +GQ      ++  PRS S   A  G+ M   
Sbjct: 117 RGTSLH-----SRRGKPEAPKGSPQINRKSGQEMTAVMQSGRPRSSSTTDAPTGSAMMEI 171

Query: 205 YSTSSAAAS 231
              ++AAA+
Sbjct: 172 ACAAAAAAA 180

>BUR1_YARLI (Q6C842) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC|
           2.7.11.23)
          Length = 706

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
 Frame = +3

Query: 3   RRRRHHLGSKHVRPPIHPKQ----RRRRKTEGEKSTPKRERRTSEEPCVRGEAAPLRFDS 170
           +RR        V+PP   KQ      R +     S P RER + +    RG     R+DS
Sbjct: 364 KRREQEKNESKVQPPPREKQPPVREPRDRDRSRDSRPPRERDSRDRRPPRG-----RYDS 418

Query: 171 TXXXXXXXXXXXXXXXXXXXXXXPRLPQELPP-DLPRRAVPPQAR 302
                                  PR   ELPP DLP R +PP+ R
Sbjct: 419 FERPERRPEGPRDGPRDRDRDEYPR---ELPPRDLPPRDLPPRDR 460

>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 27/99 (27%), Positives = 38/99 (38%)
 Frame = -2

Query: 533 GSKSMASSIRGPTEAPSRRAAPISSPNLFLSS*TGTENIQAIVPTQASIVSIPPMFRAMC 354
           GS   +S  R P +A   R +P  +P     + T  +   A  P QAS    PP   +  
Sbjct: 4   GSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPARTPPQASPARAPPPQASPA 63

Query: 353 R*APTADEASAKHRVR*TSLRWDCTAGEIWRKFLRESWP 237
           R +P     S     R +S R   T     R +L  + P
Sbjct: 64  RASPARAPPSRSSSGRSSSARSASTTSSPTRVYLVRATP 102

>SYP1_YEAST (P25623) Suppressor of yeast profilin deletion|
          Length = 870

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 249 PQELPPDLPRRAVPPQARLPDS 314
           P E+PP  P+++ PP A+ PDS
Sbjct: 444 PSEVPPSTPQQSSPPTAKEPDS 465

>CSF3R_HUMAN (Q99062) Granulocyte colony-stimulating factor receptor precursor|
           (G-CSF-R) (CD114 antigen)
          Length = 836

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
 Frame = +1

Query: 268 ISPAVQSHLKLVYLTLCFALASSAV--------GAYLHIALNIGGMLTMLACVGTIAWMF 423
           + PA   H+ L+  +   A  S+ +        G+ LHI L + G+L +L C+   AW+ 
Sbjct: 590 LEPASLYHIHLMAASQAGATNSTVLTLMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLC 649

Query: 424 SVP 432
             P
Sbjct: 650 CSP 652

>ZEP1_MOUSE (Q03172) Zinc finger protein 40 (Transcription factor|
           alphaA-CRYBP1) (Alpha A-crystallin-binding protein I)
           (Alpha A-CRYBP1)
          Length = 2688

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -2

Query: 590 PEKHPKAMAVPTNPVTRMLGSKSMASSIRGPTEAPSRRAAPISSPNL 450
           PE  PK +   ++ V R   S+   S  + PTE P     P+S P L
Sbjct: 526 PESLPKLIPSNSDHVVRGFSSQDRPSDSQAPTELPKVVVHPVSMPPL 572

>UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrolase 3 (EC|
           3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific
           processing protease 3) (Deubiquitinating enzyme 3)
          Length = 512

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 139 EARPPRSDSIRRAGAGAGMDAFYSTSSAAASGW 237
           + R P+SD     G  +G+D+F   SS  ASGW
Sbjct: 256 DERNPKSDIKISNGIKSGLDSFDDQSSVEASGW 288

>Y044_HAEIN (P44477) Hypothetical protein HI0044|
          Length = 220

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = +1

Query: 292 LKLVYLTLCFALASSAVGAYLHIALNIGGMLTMLACVGTIAWMFSVPVYEERKR-FXXXX 468
           L+  Y  L   +A SAV A++ ++LN+     ++  VG    +F      +R        
Sbjct: 21  LRNTYFLLGLTMAFSAVVAFISMSLNLPYPNIIVLLVGFYGLLFLTNKLADRPAGILAAF 80

Query: 469 XXXXXXXXSVGPLIELAIDFD-PSILVTGFVGTAIAF 576
                   ++GP++ + +      +++  F GTAI F
Sbjct: 81  AFTGFMGYTIGPILNMYVARGMEDLIMLAFAGTAIVF 117

>STK39_RAT (O88506) STE20/SPS1-related proline-alanine-rich protein kinase (EC|
           2.7.11.1) (Ste-20-related kinase)
           (Serine/threonine-protein kinase 39) (Pancreatic
           serine/threonine-protein kinase) (PS/TK) (PSTK1)
          Length = 553

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -2

Query: 599 MAAPEKHPKAMAVPTN--PVTRMLGSKSMASSIRGPTEAPSRRAAPISSP 456
           MA P   P  + +P    PVT    + + A+S   P  AP+  AAP  +P
Sbjct: 1   MAEPSGSPVHVQLPQQAAPVTAAAAAPAAATSAPAPAPAPAAPAAPAPAP 50

>USH_DROME (Q9VPQ6) Zinc-finger protein ush (Protein U-shaped)|
          Length = 1191

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 605 AMMAAPEKHPKAMAVPTNPVTRMLGSKSMASS-IRGPTEAPS 483
           ++ A P  HP  +A+PT+P+  +  S   A+S I GP   P+
Sbjct: 432 SLQATPHSHPPFLALPTHPIIIVPCSLIRAASFIPGPLPTPN 473

>WRN_MOUSE (O09053) Werner syndrome ATP-dependent helicase homolog (EC|
           3.6.1.-)
          Length = 1401

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 18/71 (25%), Positives = 35/71 (49%)
 Frame = +1

Query: 160 DSIRRAGAGAGMDAFYSTSSAAASGWGHDSLKNFRQISPAVQSHLKLVYLTLCFALASSA 339
           D +++  +  G+       +   S WGHD   +FR +  ++++ L LV +    A ASS+
Sbjct: 615 DLLQKLDSSIGITLIAVDEAHCISEWGHDFRSSFRMLG-SLKTALPLVPVIALSATASSS 673

Query: 340 VGAYLHIALNI 372
           +   +   LN+
Sbjct: 674 IREDIISCLNL 684

>NCAP_BSCR3 (Q3I5I7) Nucleocapsid protein (N structural protein) (NC)|
          Length = 421

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 9/33 (27%), Positives = 22/33 (66%)
 Frame = +3

Query: 18  HLGSKHVRPPIHPKQRRRRKTEGEKSTPKRERR 116
           H+ +  + PP  PK+ +++KT+  +  P+R+++
Sbjct: 356 HIDAYKIFPPTEPKKDKKKKTDEAQPLPQRQKK 388


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,041,114
Number of Sequences: 219361
Number of extensions: 1711993
Number of successful extensions: 7678
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7642
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)