>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  194 bits (98), Expect = 2e-46
 Identities = 158/178 (88%)
 Strand = Plus / Plus

                                                                           
Query: 165     accccgaccaaaacggtgaccggggagaagcttctgaaagagggcaatgttagagcaagg 224
               ||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 7543343 accccgatcaaaaccgtgaccgaggagaagcttctgaaagatggcaatgttagagcaagg 7543402

                                                                           
Query: 225     cttgaagcgcggaagatgctgttccagaagagtggtgagaaagggtacaataaggtggcc 284
               ||||| ||||||| | | ||||||||||||| ||||||| |  ||||||| |||||  | 
Sbjct: 7543403 cttgaggcgcggagggtactgttccagaagaatggtgaggagaggtacaacaaggttcct 7543462

                                                                         
Query: 285     gggcgcaggtcagggtctagagttgttccatacaacggggacggtgactcggaagaga 342
               |||| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 7543463 gggctcaagtcagggtctagagttgttccatacaatggggacgatgactcggaagaga 7543520



 Score =  123 bits (62), Expect = 7e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                           
Query: 492     cagaaatttatggggagctcccagaatgggatacgttcgttggagacaagggtgaacggt 551
               |||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||| 
Sbjct: 7544479 cagaaatttatggggagctctcagaatgggatccgttccttggagacacgggtgaacgga 7544538

                                                     
Query: 552     ctggaaatggcactggacgagatctcgcgtgatctggc 589
               ||||| ||||||||||| |||||||| |||||| ||||
Sbjct: 7544539 ctggagatggcactggatgagatctcccgtgatttggc 7544576



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                           
Query: 400     ttcagttagttcacaaagatgaagacctgtccaagatcaggatgcagctagttcagatag 459
               |||||| || |||||| || || |||||||| ||||||||||||||||| |||||||| |
Sbjct: 7543551 ttcagtcaggtcacaaggaagaggacctgtcaaagatcaggatgcagcttgttcagattg 7543610

                                                  
Query: 460     agaatcagcagacaaacctgctcgaccttctccag 494
               ||||||||||||| | | ||||| | |||||||||
Sbjct: 7543611 agaatcagcagaccagcttgctcaatcttctccag 7543645



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                           
Query: 1       attcccttggctccaattcggtccagtcagttacgaagaggaac 44
               |||||||||||||||| || ||||||||||||| || |||||||
Sbjct: 7543128 attcccttggctccaactctgtccagtcagttaggaggaggaac 7543171

>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0412C04
          Length = 146849

 Score =  194 bits (98), Expect = 2e-46
 Identities = 158/178 (88%)
 Strand = Plus / Plus

                                                                          
Query: 165    accccgaccaaaacggtgaccggggagaagcttctgaaagagggcaatgttagagcaagg 224
              ||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 103274 accccgatcaaaaccgtgaccgaggagaagcttctgaaagatggcaatgttagagcaagg 103333

                                                                          
Query: 225    cttgaagcgcggaagatgctgttccagaagagtggtgagaaagggtacaataaggtggcc 284
              ||||| ||||||| | | ||||||||||||| ||||||| |  ||||||| |||||  | 
Sbjct: 103334 cttgaggcgcggagggtactgttccagaagaatggtgaggagaggtacaacaaggttcct 103393

                                                                        
Query: 285    gggcgcaggtcagggtctagagttgttccatacaacggggacggtgactcggaagaga 342
              |||| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 103394 gggctcaagtcagggtctagagttgttccatacaatggggacgatgactcggaagaga 103451



 Score =  123 bits (62), Expect = 7e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                          
Query: 492    cagaaatttatggggagctcccagaatgggatacgttcgttggagacaagggtgaacggt 551
              |||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||| 
Sbjct: 104410 cagaaatttatggggagctctcagaatgggatccgttccttggagacacgggtgaacgga 104469

                                                    
Query: 552    ctggaaatggcactggacgagatctcgcgtgatctggc 589
              ||||| ||||||||||| |||||||| |||||| ||||
Sbjct: 104470 ctggagatggcactggatgagatctcccgtgatttggc 104507



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                          
Query: 400    ttcagttagttcacaaagatgaagacctgtccaagatcaggatgcagctagttcagatag 459
              |||||| || |||||| || || |||||||| ||||||||||||||||| |||||||| |
Sbjct: 103482 ttcagtcaggtcacaaggaagaggacctgtcaaagatcaggatgcagcttgttcagattg 103541

                                                 
Query: 460    agaatcagcagacaaacctgctcgaccttctccag 494
              ||||||||||||| | | ||||| | |||||||||
Sbjct: 103542 agaatcagcagaccagcttgctcaatcttctccag 103576



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                          
Query: 1      attcccttggctccaattcggtccagtcagttacgaagaggaac 44
              |||||||||||||||| || ||||||||||||| || |||||||
Sbjct: 103059 attcccttggctccaactctgtccagtcagttaggaggaggaac 103102

>gb|AY106868.1| Zea mays PCO072630 mRNA sequence
          Length = 1321

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                       
Query: 486 cttctccagaaatttatggggagctcccagaatgggatacgttcgttggagacaagggtg 545
           ||||||||||||||||||||||  ||| |||| || || ||||| ||||||||||| |||
Sbjct: 449 cttctccagaaatttatggggaagtccgagaacggtatgcgttctttggagacaagagtg 508

                                                        
Query: 546 aacggtctggaaatggcactggacgagatctcgcgtgatctggcc 590
            | || ||||| |||||  |||| |||||||| |||||| |||||
Sbjct: 509 catgggctggagatggctttggatgagatctctcgtgatttggcc 553

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 482     cgaccttctccagaaatttatgg 504
               |||||||||||||||||||||||
Sbjct: 4043541 cgaccttctccagaaatttatgg 4043519

>ref|XM_467700.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1959

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                        
Query: 157  cagacgccaccccgaccaaaacggtgaccggggagaagcttctgaaagagggcaatgtta 216
            |||| |||||||| | ||||  |||||| | |||||||||||||||||  |||||||| |
Sbjct: 1133 cagatgccaccccaatcaaagtggtgacagaggagaagcttctgaaaggaggcaatgtga 1192

                   
Query: 217  gagcaag 223
            || ||||
Sbjct: 1193 gatcaag 1199

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 482     cgaccttctccagaaatttatgg 504
               |||||||||||||||||||||||
Sbjct: 4043655 cgaccttctccagaaatttatgg 4043633

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                            
Query: 157      cagacgccaccccgaccaaaacggtgaccggggagaagcttctgaaagagggcaatgtta 216
                |||| |||||||| | ||||  |||||| | |||||||||||||||||  |||||||| |
Sbjct: 30951149 cagatgccaccccaatcaaagtggtgacagaggagaagcttctgaaaggaggcaatgtga 30951090

                       
Query: 217      gagcaag 223
                || ||||
Sbjct: 30951089 gatcaag 30951083

>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0516G10
          Length = 148937

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 157  cagacgccaccccgaccaaaacggtgaccggggagaagcttctgaaagagggcaatgtta 216
            |||| |||||||| | ||||  |||||| | |||||||||||||||||  |||||||| |
Sbjct: 6105 cagatgccaccccaatcaaagtggtgacagaggagaagcttctgaaaggaggcaatgtga 6046

                   
Query: 217  gagcaag 223
            || ||||
Sbjct: 6045 gatcaag 6039

>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0684F11
          Length = 147731

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                          
Query: 157    cagacgccaccccgaccaaaacggtgaccggggagaagcttctgaaagagggcaatgtta 216
              |||| |||||||| | ||||  |||||| | |||||||||||||||||  |||||||| |
Sbjct: 134726 cagatgccaccccaatcaaagtggtgacagaggagaagcttctgaaaggaggcaatgtga 134667

                     
Query: 217    gagcaag 223
              || ||||
Sbjct: 134666 gatcaag 134660

>gb|AC102610.18| Mus musculus chromosome 19, clone RP23-411P21, complete sequence
          Length = 226019

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 239    gatgctgttccagaagagtggtg 261
              |||||||||||||||||||||||
Sbjct: 170389 gatgctgttccagaagagtggtg 170367

>emb|CT025158.5| Mouse DNA sequence from clone RP23-178N11 on chromosome 16, complete
             sequence
          Length = 194555

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   agaagcttctgaaagagggc 209
             ||||||||||||||||||||
Sbjct: 93094 agaagcttctgaaagagggc 93075

>gb|AC122452.4| Mus musculus BAC clone RP24-255M5 from chromosome 16, complete sequence
          Length = 181463

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    gcttctgaaagagggcaatg 213
              ||||||||||||||||||||
Sbjct: 151648 gcttctgaaagagggcaatg 151667

>gb|AC110166.17| Mus musculus chromosome 16, clone RP23-80O10, complete sequence
          Length = 131042

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   gcttctgaaagagggcaatg 213
             ||||||||||||||||||||
Sbjct: 84726 gcttctgaaagagggcaatg 84745

>gb|AC084274.14| Mus musculus strain 129S6/SvEvTac clone rp22-445a10 map 16, complete
              sequence
          Length = 156624

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    agaagcttctgaaagagggc 209
              ||||||||||||||||||||
Sbjct: 116543 agaagcttctgaaagagggc 116524

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 132     cgcggcggcgatgttaccgtcgcg 155
               ||||||||||||||| ||||||||
Sbjct: 3464462 cgcggcggcgatgttgccgtcgcg 3464485

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 119     ttcgccgccttcacgcggcg 138
               ||||||||||||||||||||
Sbjct: 1435881 ttcgccgccttcacgcggcg 1435862

>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 47     gctgccggcaagcaggtcaccgcc 70
              ||||||||||| ||||||||||||
Sbjct: 826014 gctgccggcaatcaggtcaccgcc 825991

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     aaggtggccgggcgcaggtc 295
               ||||||||||||||||||||
Sbjct: 4832445 aaggtggccgggcgcaggtc 4832426

>gb|AC089982.15| Homo sapiens 12 BAC RP11-25I15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173877

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   aagagtggtgagaaagggta 271
             ||||||||||||||||||||
Sbjct: 71547 aagagtggtgagaaagggta 71528

>gb|AC090402.8| Homo sapiens chromosome 18, clone RP11-739D7, complete sequence
          Length = 150690

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   ggagaagcttctgaaagagg 207
             ||||||||||||||||||||
Sbjct: 34307 ggagaagcttctgaaagagg 34288

>gb|AC008574.5| Homo sapiens chromosome 5 clone CTC-552D5, complete sequence
          Length = 36362

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 456  atagagaatcagcagacaaa 475
            ||||||||||||||||||||
Sbjct: 2202 atagagaatcagcagacaaa 2183

>gb|AC108095.2| Homo sapiens chromosome 5 clone CTD-3080F23, complete sequence
          Length = 149102

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    atagagaatcagcagacaaa 475
              ||||||||||||||||||||
Sbjct: 148884 atagagaatcagcagacaaa 148865

>gb|AC015988.10| Homo sapiens, clone RP11-153F20, complete sequence
          Length = 150113

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   ggagaagcttctgaaagagg 207
             ||||||||||||||||||||
Sbjct: 72935 ggagaagcttctgaaagagg 72916

>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
          Length = 1072950

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 93      agcccttccatcagaagcaa 112
               ||||||||||||||||||||
Sbjct: 1026395 agcccttccatcagaagcaa 1026414

>gb|AF335470.1|AF335470 Mus musculus myosin light chain kinase (Mylk) gene, partial cds
          Length = 180102

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    gcttctgaaagagggcaatg 213
              ||||||||||||||||||||
Sbjct: 143010 gcttctgaaagagggcaatg 142991

>gb|AC107896.7| Homo sapiens chromosome 18, clone RP11-718I15, complete sequence
          Length = 185750

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    ggagaagcttctgaaagagg 207
              ||||||||||||||||||||
Sbjct: 151475 ggagaagcttctgaaagagg 151494

>gb|AE004865.1| Pseudomonas aeruginosa PAO1, section 426 of 529 of the complete
            genome
          Length = 10413

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   cggcaagcaggtcaccgccg 71
            ||||||||||||||||||||
Sbjct: 3320 cggcaagcaggtcaccgccg 3301

>gb|AC107027.9| Homo sapiens 3 BAC RP11-517B11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171562

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   aggagtttcagtcagacaac 389
             ||||||||||||||||||||
Sbjct: 15989 aggagtttcagtcagacaac 16008

>gb|AC008553.4|AC008553 Homo sapiens chromosome 5 clone CTC-512C13, complete sequence
          Length = 91172

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   atagagaatcagcagacaaa 475
             ||||||||||||||||||||
Sbjct: 22247 atagagaatcagcagacaaa 22266

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 52      cggcaagcaggtcaccgccg 71
               ||||||||||||||||||||
Sbjct: 5972157 cggcaagcaggtcaccgccg 5972138

>dbj|AK174016.1| Ciona intestinalis cDNA, clone:ciad017p24, full insert sequence
          Length = 2511

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 529 cgttggagacaagggtgaac 548
           ||||||||||||||||||||
Sbjct: 382 cgttggagacaagggtgaac 401

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     ccggcaagcaggtcaccgcc 70
              ||||||||||||||||||||
Sbjct: 582966 ccggcaagcaggtcaccgcc 582947

>dbj|AK113159.1| Ciona intestinalis cDNA, clone:ciad011e06, full insert sequence
          Length = 3319

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 529  cgttggagacaagggtgaac 548
            ||||||||||||||||||||
Sbjct: 1266 cgttggagacaagggtgaac 1285

>dbj|AK112318.1| Ciona intestinalis cDNA, clone:ciad019b03, full insert sequence
          Length = 1586

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 529  cgttggagacaagggtgaac 548
            ||||||||||||||||||||
Sbjct: 1113 cgttggagacaagggtgaac 1132

>gb|AF051690.1|AF051690 Pseudomonas aeruginosa iron-uptake factor (piuC), hydroxamate-type
            ferrisiderophore receptor (piuA), and iron-uptake factor
            (piuB) genes, complete cds
          Length = 7701

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   cggcaagcaggtcaccgccg 71
            ||||||||||||||||||||
Sbjct: 5017 cggcaagcaggtcaccgccg 5036

>emb|AL773592.5| Mouse DNA sequence from clone RP23-336B11 on chromosome 4, complete
              sequence
          Length = 219956

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 449    agttcagatagagaatcagc 468
              ||||||||||||||||||||
Sbjct: 152957 agttcagatagagaatcagc 152938

>dbj|D49538.1|ASNDHGO Aspergillus terreus DHGO gene for dihydrogeodin oxidase, complete cds
            (exon1-7)
          Length = 3041

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cagaagcaagaagagttcgc 123
            ||||||||||||||||||||
Sbjct: 2891 cagaagcaagaagagttcgc 2910


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,403,889
Number of Sequences: 3902068
Number of extensions: 4403889
Number of successful extensions: 76271
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75926
Number of HSP's gapped (non-prelim): 341
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)