ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49e10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete cds Length = 1465 Score = 244 bits (123), Expect = 2e-61 Identities = 246/287 (85%) Strand = Plus / Plus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||| ||||||||||| ||| |||| ||| | ||| || |||||||||||||||||||| Sbjct: 140 acgccttacaagatggggcagttcgagctctctcaccgggtggtgctggcgccgctgacg 199 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 ||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 200 aggtgccgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcccagcgc 259 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| || ||| |||||||||| |||||||||||||| || | ||| |||||||| Sbjct: 260 gccaccaggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcagggg 319 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||| || || || || |||||| |||||| |||||||||||||||||||||||| Sbjct: 320 tacccggagactcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtc 379 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttctgccagatctggca 390 | |||||| ||| ||||||||| ||||| |||||||||||||||| Sbjct: 380 gacgccgtccaccgcaagggcgccatcttcgtctgccagatctggca 426
>gb|AY108052.1| Zea mays PCO079165 mRNA sequence Length = 1489 Score = 244 bits (123), Expect = 2e-61 Identities = 246/287 (85%) Strand = Plus / Plus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||| ||||||||||| ||| |||| ||| | ||| || |||||||||||||||||||| Sbjct: 162 acgccttacaagatggggcagttcgagctctctcaccgggtggtgctggcgccgctgacg 221 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 ||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 222 aggtgccgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcccagcgc 281 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| || ||| |||||||||| |||||||||||||| || | ||| |||||||| Sbjct: 282 gccaccaggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcagggg 341 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||| || || || || |||||| |||||| |||||||||||||||||||||||| Sbjct: 342 tacccggagactcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtc 401 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttctgccagatctggca 390 | |||||| ||| ||||||||| ||||| |||||||||||||||| Sbjct: 402 gacgccgtccaccgcaagggcgccatcttcgtctgccagatctggca 448
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds Length = 1833 Score = 242 bits (122), Expect = 9e-61 Identities = 257/302 (85%) Strand = Plus / Plus Query: 137 cacaggatggtgctggcgccgctgacgaggcagcgctcctacggcaacgtgccgcagccg 196 |||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 718 cacagggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtcccgcagccg 777 Query: 197 cacgccgccgtgtactacgcccagcgcgccaccgccggcggcttgctcatcgccgaggcc 256 |||| |||||| |||||||| |||||||||||| |||||| | |||||| | |||||| Sbjct: 778 cacggcgccgtctactacgcgcagcgcgccacccggggcggcctcctcatcactgaggcc 837 Query: 257 acgggggtctccgacacggcgcagggatacaaggacaccccggggatatggacggcggag 316 ||||| |||||||||||||||||||| |||| ||||| ||||| | |||||| | || Sbjct: 838 acgggcgtctccgacacggcgcagggctacaccgacacgccgggagtgtggacgcccgac 897 Query: 317 cacgtcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 376 || || | ||||||| ||||||||| | |||||| |||||||||||||| |||||||| Sbjct: 898 caggtggcggcgtggcggcccatcgtagacgccgtccacgccaagggcgccgtcttcttc 957 Query: 377 tgccagatctggcactgcggccgcgtgtctaccttcgagctgcagcccggcggcgccgcg 436 |||||| |||||||| ||||||||| || ||| || ||| ||||| ||||| |||||| Sbjct: 958 tgccagctctggcacgtcggccgcgtctccaccaccgcgctccagccgggcggggccgcg 1017 Query: 437 cc 438 || Sbjct: 1018 cc 1019
>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete cds Length = 1409 Score = 220 bits (111), Expect = 3e-54 Identities = 243/287 (84%) Strand = Plus / Plus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||| ||||||||||| ||| |||| ||| | ||| || |||||||||||||||||||| Sbjct: 125 acgccttacaagatggggcagttcgagctctctcaccgggtggtgctggcgccgctgacg 184 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 ||| |||||||||||||||||||||||||| |||||||||||||||||| | |||||| Sbjct: 185 aggtgccgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcgcagcgc 244 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| || ||| |||||||||| |||||||||||||| || | ||| |||||||| Sbjct: 245 gccaccaggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcagggg 304 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 | | ||| | || || || |||||| |||||| |||||||||||||||||||||||| Sbjct: 305 ttcccggagtctcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtc 364 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttctgccagatctggca 390 | |||||| ||| ||||||||| ||||| |||||||||||||||| Sbjct: 365 gacgccgtccaccgcaagggcgccatcttcgtctgccagatctggca 411
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 198 bits (100), Expect = 1e-47 Identities = 241/288 (83%) Strand = Plus / Minus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| ||| Sbjct: 5907031 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 5906972 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || | |||||||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 5906971 cggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtactacacgcagcgc 5906912 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| ||||||| | ||| || | |||||||| || ||||||||||| |||||||| Sbjct: 5906911 gccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggc 5906852 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||||||||| || || |||||| | |||| |||||||||||||||||||||||| Sbjct: 5906851 tacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtc 5906792 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttctgccagatctggcac 391 | |||||| ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 5906791 gacgccgtccaccgcaagggcgccctcttcatctgccagctctggcac 5906744 Score = 180 bits (91), Expect = 3e-42 Identities = 187/219 (85%) Strand = Plus / Minus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 5896759 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 5896700 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| ||| Sbjct: 5896699 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 5896640 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 5896639 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 5896580 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 5896579 caccgcaagggcgccctcttcatctgccagctctggcac 5896541 Score = 165 bits (83), Expect = 2e-37 Identities = 185/219 (84%) Strand = Plus / Minus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 5891089 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 5891030 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||| ||| |||||||| ||| ||| Sbjct: 5891029 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 5890970 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 5890969 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 5890910 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 5890909 caccgcaagggcgccctcttcatctgccagctctggcac 5890871 Score = 153 bits (77), Expect = 6e-34 Identities = 224/273 (82%) Strand = Plus / Minus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || || ||||| || ||||||| |||||||||||| Sbjct: 5925063 acgccgtacaagatggggcagctggagctgtcccaccgggtggtgctcgcgccgctgacg 5925004 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||| |||||||||||||||||||||| ||||||||| | |||||| Sbjct: 5925003 cggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtactactcgcagcgc 5924944 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 5924943 gccaccaacggcggactcctcatcgcggaggccactgtcatctcccccaccgcgcagggc 5924884 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||||||||| || || | ||| | |||| |||| |||||||| ||||||||| Sbjct: 5924883 tacccggacacccccggcatctacacgcagcagcagatcgaagcgtggaaacccatcgtc 5924824 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 5924823 gacgccgtccaccgcaagggcgccctcttcttc 5924791 Score = 137 bits (69), Expect = 4e-29 Identities = 222/273 (81%) Strand = Plus / Minus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| ||| Sbjct: 5930347 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 5930288 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 5930287 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 5930228 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 || ||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 5930227 gcgaccaggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggc 5930168 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||| ||||| || || | ||| | |||| ||||||||||||||||||||||| Sbjct: 5930167 tacccggagacccccggcatctacacgcagcagcagatcgaggcgtggaagcccatcgtc 5930108 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 5930107 gacgccgtccaccgcaagggcgccctcttcttc 5930075 Score = 123 bits (62), Expect = 5e-25 Identities = 224/278 (80%) Strand = Plus / Minus Query: 105 cgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacga 164 |||||||||||||||| | | |||| ||| ||||| | ||||||| ||||||||||| Sbjct: 5916643 cgccgtacaagatggggcggttcgagctctcccaccgcgtggtgctcgcgccgctgactc 5916584 Query: 165 ggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcg 224 || |||||||||| | ||||||| ||||||||||| || |||||||| | ||||||| Sbjct: 5916583 ggtgccgctcctacgaccacgtgccacagccgcacgcggcgctgtactactcgcagcgcg 5916524 Query: 225 ccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggat 284 ||||| |||||| | |||||| | |||||||| ||||| |||| ||| | | |||| | Sbjct: 5916523 ccaccaatggcggcctcctcatctcggaggccaccggggtgtccgccaccggggagggct 5916464 Query: 285 acaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcg 344 || ||| | ||| || | |||||| | |||| ||| |||||||||| |||||||||| Sbjct: 5916463 acccggagatccccggcgtctggacgcggcagcaggtcaaggcgtggaaacccatcgtcg 5916404 Query: 345 ccgccgtgcacgccaagggcgcgctcttcttctgccag 382 |||||| ||| ||||||||||||||||||||||||| Sbjct: 5916403 acgccgtccaccgcaagggcgcgctcttcttctgccag 5916366
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 198 bits (100), Expect = 1e-47 Identities = 241/288 (83%) Strand = Plus / Minus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| ||| Sbjct: 28683 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 28624 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || | |||||||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 28623 cggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtactacacgcagcgc 28564 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| ||||||| | ||| || | |||||||| || ||||||||||| |||||||| Sbjct: 28563 gccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggc 28504 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||||||||| || || |||||| | |||| |||||||||||||||||||||||| Sbjct: 28503 tacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtc 28444 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttctgccagatctggcac 391 | |||||| ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 28443 gacgccgtccaccgcaagggcgccctcttcatctgccagctctggcac 28396 Score = 180 bits (91), Expect = 3e-42 Identities = 187/219 (85%) Strand = Plus / Minus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 18411 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 18352 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| ||| Sbjct: 18351 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 18292 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 18291 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 18232 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 18231 caccgcaagggcgccctcttcatctgccagctctggcac 18193 Score = 165 bits (83), Expect = 2e-37 Identities = 185/219 (84%) Strand = Plus / Minus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 12741 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 12682 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||| ||| |||||||| ||| ||| Sbjct: 12681 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 12622 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 12621 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 12562 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 12561 caccgcaagggcgccctcttcatctgccagctctggcac 12523 Score = 153 bits (77), Expect = 6e-34 Identities = 224/273 (82%) Strand = Plus / Minus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || || ||||| || ||||||| |||||||||||| Sbjct: 46715 acgccgtacaagatggggcagctggagctgtcccaccgggtggtgctcgcgccgctgacg 46656 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||| |||||||||||||||||||||| ||||||||| | |||||| Sbjct: 46655 cggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtactactcgcagcgc 46596 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 46595 gccaccaacggcggactcctcatcgcggaggccactgtcatctcccccaccgcgcagggc 46536 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||||||||| || || | ||| | |||| |||| |||||||| ||||||||| Sbjct: 46535 tacccggacacccccggcatctacacgcagcagcagatcgaagcgtggaaacccatcgtc 46476 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 46475 gacgccgtccaccgcaagggcgccctcttcttc 46443 Score = 137 bits (69), Expect = 4e-29 Identities = 222/273 (81%) Strand = Plus / Minus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| ||| Sbjct: 51999 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 51940 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 51939 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 51880 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 || ||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 51879 gcgaccaggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggc 51820 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||| ||||| || || | ||| | |||| ||||||||||||||||||||||| Sbjct: 51819 tacccggagacccccggcatctacacgcagcagcagatcgaggcgtggaagcccatcgtc 51760 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 51759 gacgccgtccaccgcaagggcgccctcttcttc 51727 Score = 123 bits (62), Expect = 5e-25 Identities = 224/278 (80%) Strand = Plus / Minus Query: 105 cgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacga 164 |||||||||||||||| | | |||| ||| ||||| | ||||||| ||||||||||| Sbjct: 38295 cgccgtacaagatggggcggttcgagctctcccaccgcgtggtgctcgcgccgctgactc 38236 Query: 165 ggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcg 224 || |||||||||| | ||||||| ||||||||||| || |||||||| | ||||||| Sbjct: 38235 ggtgccgctcctacgaccacgtgccacagccgcacgcggcgctgtactactcgcagcgcg 38176 Query: 225 ccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggat 284 ||||| |||||| | |||||| | |||||||| ||||| |||| ||| | | |||| | Sbjct: 38175 ccaccaatggcggcctcctcatctcggaggccaccggggtgtccgccaccggggagggct 38116 Query: 285 acaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcg 344 || ||| | ||| || | |||||| | |||| ||| |||||||||| |||||||||| Sbjct: 38115 acccggagatccccggcgtctggacgcggcagcaggtcaaggcgtggaaacccatcgtcg 38056 Query: 345 ccgccgtgcacgccaagggcgcgctcttcttctgccag 382 |||||| ||| ||||||||||||||||||||||||| Sbjct: 38055 acgccgtccaccgcaagggcgcgctcttcttctgccag 38018
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 198 bits (100), Expect = 1e-47 Identities = 241/288 (83%) Strand = Plus / Minus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| ||| Sbjct: 107806 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 107747 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || | |||||||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 107746 cggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtactacacgcagcgc 107687 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| ||||||| | ||| || | |||||||| || ||||||||||| |||||||| Sbjct: 107686 gccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggc 107627 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||||||||| || || |||||| | |||| |||||||||||||||||||||||| Sbjct: 107626 tacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtc 107567 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttctgccagatctggcac 391 | |||||| ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 107566 gacgccgtccaccgcaagggcgccctcttcatctgccagctctggcac 107519 Score = 180 bits (91), Expect = 3e-42 Identities = 187/219 (85%) Strand = Plus / Minus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 97534 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 97475 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| ||| Sbjct: 97474 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 97415 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 97414 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 97355 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 97354 caccgcaagggcgccctcttcatctgccagctctggcac 97316 Score = 165 bits (83), Expect = 2e-37 Identities = 185/219 (84%) Strand = Plus / Minus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 91864 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 91805 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||| ||| |||||||| ||| ||| Sbjct: 91804 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 91745 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 91744 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 91685 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 91684 caccgcaagggcgccctcttcatctgccagctctggcac 91646 Score = 153 bits (77), Expect = 6e-34 Identities = 224/273 (82%) Strand = Plus / Minus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || || ||||| || ||||||| |||||||||||| Sbjct: 125838 acgccgtacaagatggggcagctggagctgtcccaccgggtggtgctcgcgccgctgacg 125779 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||| |||||||||||||||||||||| ||||||||| | |||||| Sbjct: 125778 cggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtactactcgcagcgc 125719 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 125718 gccaccaacggcggactcctcatcgcggaggccactgtcatctcccccaccgcgcagggc 125659 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||||||||| || || | ||| | |||| |||| |||||||| ||||||||| Sbjct: 125658 tacccggacacccccggcatctacacgcagcagcagatcgaagcgtggaaacccatcgtc 125599 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 125598 gacgccgtccaccgcaagggcgccctcttcttc 125566 Score = 137 bits (69), Expect = 4e-29 Identities = 222/273 (81%) Strand = Plus / Minus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| ||| Sbjct: 131122 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 131063 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 131062 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 131003 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 || ||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 131002 gcgaccaggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggc 130943 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||| ||||| || || | ||| | |||| ||||||||||||||||||||||| Sbjct: 130942 tacccggagacccccggcatctacacgcagcagcagatcgaggcgtggaagcccatcgtc 130883 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 130882 gacgccgtccaccgcaagggcgccctcttcttc 130850 Score = 123 bits (62), Expect = 5e-25 Identities = 224/278 (80%) Strand = Plus / Minus Query: 105 cgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacga 164 |||||||||||||||| | | |||| ||| ||||| | ||||||| ||||||||||| Sbjct: 117418 cgccgtacaagatggggcggttcgagctctcccaccgcgtggtgctcgcgccgctgactc 117359 Query: 165 ggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcg 224 || |||||||||| | ||||||| ||||||||||| || |||||||| | ||||||| Sbjct: 117358 ggtgccgctcctacgaccacgtgccacagccgcacgcggcgctgtactactcgcagcgcg 117299 Query: 225 ccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggat 284 ||||| |||||| | |||||| | |||||||| ||||| |||| ||| | | |||| | Sbjct: 117298 ccaccaatggcggcctcctcatctcggaggccaccggggtgtccgccaccggggagggct 117239 Query: 285 acaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcg 344 || ||| | ||| || | |||||| | |||| ||| |||||||||| |||||||||| Sbjct: 117238 acccggagatccccggcgtctggacgcggcagcaggtcaaggcgtggaaacccatcgtcg 117179 Query: 345 ccgccgtgcacgccaagggcgcgctcttcttctgccag 382 |||||| ||| ||||||||||||||||||||||||| Sbjct: 117178 acgccgtccaccgcaagggcgcgctcttcttctgccag 117141
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full insert sequence Length = 1311 Score = 198 bits (100), Expect = 1e-47 Identities = 241/288 (83%) Strand = Plus / Plus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| ||| Sbjct: 134 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 193 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || | |||||||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 194 cggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtactacacgcagcgc 253 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 |||||| ||||||| | ||| || | |||||||| || ||||||||||| |||||||| Sbjct: 254 gccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggc 313 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||||||||| || || |||||| | |||| |||||||||||||||||||||||| Sbjct: 314 tacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtc 373 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttctgccagatctggcac 391 | |||||| ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 374 gacgccgtccaccgcaagggcgccctcttcatctgccagctctggcac 421
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full insert sequence Length = 1281 Score = 180 bits (91), Expect = 3e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| ||| Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 320 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 379 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 380 caccgcaagggcgccctcttcatctgccagctctggcac 418
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full insert sequence Length = 1281 Score = 180 bits (91), Expect = 3e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| ||| Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 320 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 379 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 380 caccgcaagggcgccctcttcatctgccagctctggcac 418
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full insert sequence Length = 1422 Score = 180 bits (91), Expect = 3e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 195 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 254 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| ||| Sbjct: 255 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 314 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 315 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 374 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 375 caccgcaagggcgccctcttcatctgccagctctggcac 413
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full insert sequence Length = 1434 Score = 180 bits (91), Expect = 3e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| ||| Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 320 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 379 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 380 caccgcaagggcgccctcttcatctgccagctctggcac 418
>gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3) mRNA, complete cds Length = 1431 Score = 165 bits (83), Expect = 2e-37 Identities = 230/279 (82%) Strand = Plus / Plus Query: 107 ccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacgagg 166 |||||||||||||| ||||| || ||| ||||| | |||||||||||||| ||||| || Sbjct: 110 ccgtacaagatggggcagctggagctctcccaccgcgtggtgctggcgccgatgacgcgg 169 Query: 167 cagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgcc 226 ||| || ||| |||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 170 tgccgcgccatcggggacgtgccgcagccgcacgccgccgtgtactactcgcagcgcgcc 229 Query: 227 accgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatac 286 | | |||||| |||||||| |||||| ||||||||| |||| ||| |||||||| | | Sbjct: 230 agcaggggcggcgtgctcatcaccgagggcacgggggtgtccgccaccgcgcagggcttc 289 Query: 287 aaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgcc 346 || |||| || || |||||| |||||| || | |||||||||||||||||||| | Sbjct: 290 ccggggtcccccggcatctggacgcaggagcaggtggcggcgtggaagcccatcgtcgac 349 Query: 347 gccgtgcacgccaagggcgcgctcttcttctgccagatc 385 ||||| ||| |||||| ||||||||||||||||||||| Sbjct: 350 gccgtccaccgcaagggtgcgctcttcttctgccagatc 388
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full insert sequence Length = 1517 Score = 165 bits (83), Expect = 2e-37 Identities = 185/219 (84%) Strand = Plus / Plus Query: 173 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 232 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 278 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 337 Query: 233 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaaggac 292 |||||| | |||||| | |||||||| || ||||||| ||| |||||||| ||| ||| Sbjct: 338 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 397 Query: 293 accccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgtg 352 || || || | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 398 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 457 Query: 353 cacgccaagggcgcgctcttcttctgccagatctggcac 391 ||| ||||||||| |||||| |||||||| |||||||| Sbjct: 458 caccgcaagggcgccctcttcatctgccagctctggcac 496
>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic acid reductase (opda gene) Length = 1343 Score = 137 bits (69), Expect = 4e-29 Identities = 222/273 (81%) Strand = Plus / Plus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| ||| Sbjct: 91 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 150 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 151 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 210 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 || ||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 211 gcgaccaggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggc 270 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||| ||||| || || | ||| | |||| ||||||||||||||||||||||| Sbjct: 271 tacccggagacccccggcatctacacgcagcagcagatcgaggcgtggaagcccatcgtc 330 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 331 gacgccgtccaccgcaagggcgccctcttcttc 363
>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 gene for 12-oxo-phytodienoic acid reductase, complete cds Length = 2492 Score = 137 bits (69), Expect = 4e-29 Identities = 222/273 (81%) Strand = Plus / Plus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| ||| Sbjct: 1105 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 1164 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 1165 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 1224 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 || ||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 1225 gcgaccaggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggc 1284 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||| ||||| || || | ||| | |||| ||||||||||||||||||||||| Sbjct: 1285 tacccggagacccccggcatctacacgcagcagcagatcgaggcgtggaagcccatcgtc 1344 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 1345 gacgccgtccaccgcaagggcgccctcttcttc 1377
>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full insert sequence Length = 1520 Score = 137 bits (69), Expect = 4e-29 Identities = 222/273 (81%) Strand = Plus / Plus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| ||| Sbjct: 157 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 216 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 217 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 276 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 || ||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 277 gcgaccaggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggc 336 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||| ||||| || || | ||| | |||| ||||||||||||||||||||||| Sbjct: 337 tacccggagacccccggcatctacacgcagcagcagatcgaggcgtggaagcccatcgtc 396 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 397 gacgccgtccaccgcaagggcgccctcttcttc 429
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full insert sequence Length = 1295 Score = 137 bits (69), Expect = 4e-29 Identities = 156/185 (84%) Strand = Plus / Plus Query: 207 tgtactacgcccagcgcgccaccgccggcggcttgctcatcgccgaggccacgggggtct 266 |||||||| | |||||||||||| ||||||| | ||| || | |||||||| || |||| Sbjct: 220 tgtactacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtct 279 Query: 267 ccgacacggcgcagggatacaaggacaccccggggatatggacggcggagcacgtcgagg 326 ||||||| |||||||| ||| ||||||||| || || |||||| | |||| ||||||| Sbjct: 280 ccgacaccgcgcagggctacccggacacccccggcatctggacgcagcagcaggtcgagg 339 Query: 327 cgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttctgccagatct 386 |||||||||||||||||| |||||| ||| ||||||||| |||||| |||||||| ||| Sbjct: 340 cgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctct 399 Query: 387 ggcac 391 ||||| Sbjct: 400 ggcac 404 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| ||| Sbjct: 135 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 194 Query: 164 aggcagcgctcctacggcaacgtgc 188 || | ||||||||||||||||||| Sbjct: 195 cggaaccgctcctacggcaacgtgc 219
>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase, complete cds Length = 1384 Score = 137 bits (69), Expect = 4e-29 Identities = 222/273 (81%) Strand = Plus / Plus Query: 104 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacg 163 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| ||| Sbjct: 129 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 188 Query: 164 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 223 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 189 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 248 Query: 224 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 283 || ||| |||||| | |||||||| |||||||| | ||||| ||| |||||||| Sbjct: 249 gcgaccaggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggc 308 Query: 284 tacaaggacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 343 ||| ||| ||||| || || | ||| | |||| ||||||||||||||||||||||| Sbjct: 309 tacccggagacccccggcatctacacgcagcagcagatcgaggcgtggaagcccatcgtc 368 Query: 344 gccgccgtgcacgccaagggcgcgctcttcttc 376 | |||||| ||| ||||||||| ||||||||| Sbjct: 369 gacgccgtccaccgcaagggcgccctcttcttc 401
>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for oxo-phytodienoic acid reductase (opda2 gene) Length = 1248 Score = 109 bits (55), Expect = 8e-21 Identities = 169/207 (81%) Strand = Plus / Plus Query: 170 cgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccacc 229 |||||||||||||||||||||||||||||||| || ||||||||| | ||||| || ||| Sbjct: 1 cgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgggcgacc 60 Query: 230 gccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag 289 |||||| | |||||||| |||||||| | ||||| ||| |||||||| ||| | Sbjct: 61 aggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggctacccg 120 Query: 290 gacaccccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgcc 349 || ||||| || || | ||| | |||| |||||||||||||||||||||||| |||| Sbjct: 121 gagacccccggcatctacacgcagcagcagatcgaggcgtggaagcccatcgtcgacgcc 180 Query: 350 gtgcacgccaagggcgcgctcttcttc 376 || ||| ||||||||| ||||||||| Sbjct: 181 gtccaccgcaagggcgccctcttcttc 207
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 347 gccgtgcacgccaagggcgcgctcttcttctgccagatctggcactgcggccgcgtgt 404 |||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||| Sbjct: 15176090 gccgtgcacgccaagggcgcactcttcttctgccaaatctggcacaacggtcgcgtgt 15176033 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 349 cgtgcacgccaagggcgcgctcttcttctgccagatctggcac 391 |||||||||||||||||| |||||||||||||||| |||||| Sbjct: 15169717 cgtgcacgccaagggcgccgtcttcttctgccagatatggcac 15169675 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 97 tctcctcacgccgtacaagatgggccagctcgacctcgcccacagg 142 |||||| || || |||||||||||||||||| |||| || |||||| Sbjct: 15177586 tctcctgacaccctacaagatgggccagctcaacctggcacacagg 15177541 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaagcccatcgtcgccgccg 350 |||||||||||||||||||| Sbjct: 22387419 gaagcccatcgtcgccgccg 22387400
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 347 gccgtgcacgccaagggcgcgctcttcttctgccagatctggcactgcggccgcgtgt 404 |||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||| Sbjct: 148056 gccgtgcacgccaagggcgcactcttcttctgccaaatctggcacaacggtcgcgtgt 147999 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 349 cgtgcacgccaagggcgcgctcttcttctgccagatctggcac 391 |||||||||||||||||| |||||||||||||||| |||||| Sbjct: 141683 cgtgcacgccaagggcgccgtcttcttctgccagatatggcac 141641 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 97 tctcctcacgccgtacaagatgggccagctcgacctcgcccacagg 142 |||||| || || |||||||||||||||||| |||| || |||||| Sbjct: 149552 tctcctgacaccctacaagatgggccagctcaacctggcacacagg 149507
>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0493G01 Length = 167587 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 347 gccgtgcacgccaagggcgcgctcttcttctgccagatctggcactgcggccgcgtgt 404 |||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||| Sbjct: 29463 gccgtgcacgccaagggcgcactcttcttctgccaaatctggcacaacggtcgcgtgt 29406 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 349 cgtgcacgccaagggcgcgctcttcttctgccagatctggcac 391 |||||||||||||||||| |||||||||||||||| |||||| Sbjct: 23090 cgtgcacgccaagggcgccgtcttcttctgccagatatggcac 23048 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 97 tctcctcacgccgtacaagatgggccagctcgacctcgcccacagg 142 |||||| || || |||||||||||||||||| |||| || |||||| Sbjct: 30959 tctcctgacaccctacaagatgggccagctcaacctggcacacagg 30914
>dbj|AK121554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G12, full insert sequence Length = 1613 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 347 gccgtgcacgccaagggcgcgctcttcttctgccagatctggcactgcggccgcgtgt 404 |||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||| Sbjct: 574 gccgtgcacgccaagggcgcactcttcttctgccaaatctggcacaacggtcgcgtgt 631 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 97 tctcctcacgccgtacaagatgggccagctcgacctcgcccacaggat 144 |||||| || || |||||||||||||||||| |||| || |||||||| Sbjct: 93 tctcctgacaccctacaagatgggccagctcaacctggcacacaggat 140
>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full insert sequence Length = 2710 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 349 cgtgcacgccaagggcgcgctcttcttctgccagatctggcac 391 |||||||||||||||||| |||||||||||||||| |||||| Sbjct: 451 cgtgcacgccaagggcgccgtcttcttctgccagatatggcac 493 Score = 50.1 bits (25), Expect = 0.007 Identities = 91/113 (80%) Strand = Plus / Plus Query: 110 tacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacgaggcag 169 ||||||||||||||| | || ||||| |||||| | || || |||||| ||||| || Sbjct: 229 tacaagatgggccagtttgatctcgctcacagggtcgttcttgcgccgttgacgcggtgc 288 Query: 170 cgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcg 222 || |||||||| |||||||| ||||||| ||||| ||||||||| ||||| Sbjct: 289 cggtcctacgggaacgtgcccgggccgcacaacgccgcgtactacgcgcagcg 341
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 208 gtactacgcccagcgcgccaccgccgg 234 ||||||||||||||||||||||||||| Sbjct: 45363 gtactacgcccagcgcgccaccgccgg 45389
>gb|AY921643.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR6) mRNA, complete cds Length = 1267 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 110 tacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacgagg 166 |||||||||||| | || |||| || |||||| | ||||||||||||||||||||| Sbjct: 72 tacaagatgggcgatttcaacctggcacacagggttgtgctggcgccgctgacgagg 128 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ccggcggcttgctcatcgccgaggcc 256 |||||||||| ||||||||||||||| Sbjct: 196 ccggcggcttcctcatcgccgaggcc 221
>gb|AE011767.1| Xanthomonas axonopodis pv. citri str. 306, section 145 of 469 of the complete genome Length = 11162 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 203 gccgtgtactacgcccagcgcgccaccgccggc 235 |||| |||||||| ||||||||||||||||||| Sbjct: 9266 gccgagtactacggccagcgcgccaccgccggc 9234
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 203 gccgtgtactacgcccagcgcgccaccgccggc 235 |||| |||||||||||||||||||| ||||||| Sbjct: 1949355 gccgagtactacgcccagcgcgccagcgccggc 1949387 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 208 gtactacgcccagcgcgccaccgccggc 235 ||||||| |||||||||||| ||||||| Sbjct: 411227 gtactacacccagcgcgccagcgccggc 411200
>gb|AY106849.1| Zea mays PCO134627 mRNA sequence Length = 1274 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 110 tacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctgacgagg 166 |||||||||||| | || |||| || |||||| | ||||||||||||||||||||| Sbjct: 79 tacaagatgggcgatttcaacctggcacacagggttgtgctggcgccgctgacgagg 135 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ccggcggcttgctcatcgccgaggcc 256 |||||||||| ||||||||||||||| Sbjct: 203 ccggcggcttcctcatcgccgaggcc 228
>gb|AE012230.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 138 of 460 of the complete genome Length = 10813 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 208 gtactacgcccagcgcgccaccgccggc 235 ||||||||||||||||||||| |||||| Sbjct: 10508 gtactacgcccagcgcgccactgccggc 10481
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 208 gtactacgcccagcgcgccaccgccggc 235 ||||||||||||||||||||| |||||| Sbjct: 3509354 gtactacgcccagcgcgccactgccggc 3509381
>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds Length = 1594 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 208 gtactacgcccagcgcgccaccgccggcggcttgctcatcgccgagg 254 ||||||||| ||||| |||| | |||||||||||||||| |||||| Sbjct: 404 gtactacgcgcagcggtccacggacggcggcttgctcatctccgagg 450 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 130 cctcgcccacaggatggtgctggcgccgctgac 162 |||||||||| || |||||||||||||| |||| Sbjct: 326 cctcgcccaccgggtggtgctggcgccgatgac 358
>dbj|AK094176.1| Homo sapiens cDNA FLJ36857 fis, clone ASTRO2014961 Length = 2096 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 12 catcagtcttcttcttcctcctc 34 ||||||||||||||||||||||| Sbjct: 1767 catcagtcttcttcttcctcctc 1745
>gb|AC016725.5| Homo sapiens BAC clone RP11-341H1 from 2, complete sequence Length = 164180 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 catcagtcttcttcttcctcctc 34 ||||||||||||||||||||||| Sbjct: 26981 catcagtcttcttcttcctcctc 27003
>gb|AY921642.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR5) mRNA, complete cds Length = 1533 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 158 ctgacgaggcagcgctcctacggcaacgtgccgcagcc 195 |||||||| ||||| |||||||||||||| || ||||| Sbjct: 260 ctgacgagacagcggtcctacggcaacgttcctcagcc 297 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 251 gaggccacgggggtctccgacacggcgcagggatacaaggacac 294 |||||||||||||| || ||||| || || || ||||||||||| Sbjct: 353 gaggccacgggggtttcagacactgcccaagggtacaaggacac 396
>gb|BT018936.1| Zea mays clone Contig79.F mRNA sequence Length = 1257 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Plus Query: 245 atcgccgaggccacgggggtctccgacacggcgcagggatacaaggacac 294 ||||| |||||||||||||| || ||||| || || || ||||||||||| Sbjct: 178 atcgctgaggccacgggggtttcagacactgctcaagggtacaaggacac 227
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 210 actacgcccagcgcgccaccgccggc 235 ||||| |||||||||||||||||||| Sbjct: 1752748 actacacccagcgcgccaccgccggc 1752723
>emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 in linkage group 3, complete sequence Length = 194437 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 gtcttcttcttcctcctctgcc 38 |||||||||||||||||||||| Sbjct: 86965 gtcttcttcttcctcctctgcc 86986
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 cgccggcggcttgctcatcgc 249 ||||||||||||||||||||| Sbjct: 507927 cgccggcggcttgctcatcgc 507907
>gb|U56959.1| Caenorhabditis elegans cosmid T21F4, complete sequence Length = 17758 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 gctcaagaaaaacaacttatt 69 ||||||||||||||||||||| Sbjct: 2177 gctcaagaaaaacaacttatt 2157
>emb|CR712439.2|CNS0GCO3 Tetraodon nigroviridis full-length cDNA Length = 456 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 ttcttcttcctcctctgccattgat 44 |||||||||||||||| |||||||| Sbjct: 205 ttcttcttcctcctcttccattgat 181
>emb|CR655219.2|CNS0F4JD Tetraodon nigroviridis full-length cDNA Length = 1084 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 ttcttcttcctcctctgccattgat 44 |||||||||||||||| |||||||| Sbjct: 879 ttcttcttcctcctcttccattgat 855
>emb|CR643609.2|CNS0EVKV Tetraodon nigroviridis full-length cDNA Length = 1065 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 ttcttcttcctcctctgccattgat 44 |||||||||||||||| |||||||| Sbjct: 871 ttcttcttcctcctcttccattgat 847
>gb|AC102510.5| Mus musculus chromosome 5, clone RP24-346C14, complete sequence Length = 180051 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgcc 38 ||||||||||||||||||||| Sbjct: 51389 tcttcttcttcctcctctgcc 51409
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gcgccgcgccgctgtcgagca 449 ||||||||||||||||||||| Sbjct: 1612088 gcgccgcgccgctgtcgagca 1612108
>emb|AL121591.3|HSJ706G20 Human DNA sequence from clone RP4-706G20 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 91000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 gtcttcttcttcctcctctgc 37 ||||||||||||||||||||| Sbjct: 49981 gtcttcttcttcctcctctgc 50001
>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3 Length = 227448 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgcc 38 ||||||||||||||||||||| Sbjct: 212993 tcttcttcttcctcctctgcc 212973
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cgccggcggcttgctcatcgc 249 ||||||||||||||||||||| Sbjct: 956728 cgccggcggcttgctcatcgc 956748
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 212 tacgcccagcgcgccaccgccggcggcttgctcatcgccga 252 |||| ||||||||| || | |||||||||||||||||||| Sbjct: 8347988 tacggccagcgcgcgacgccgggcggcttgctcatcgccga 8347948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gcgccgcgccgctgtcgagca 449 ||||||||||||||||||||| Sbjct: 3441847 gcgccgcgccgctgtcgagca 3441867 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 331 gaagcccatcgtcgccgccgtgca 354 |||||| ||||||||||||||||| Sbjct: 135064 gaagccgatcgtcgccgccgtgca 135087
>gb|CP000005.1| Gluconobacter oxydans 621H plasmid pGOX2, complete sequence Length = 26568 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 329 tggaagcccatcgtcgccgccgtgcacgccaagggcg 365 |||||||||||| |||||| || ||||||||||||| Sbjct: 14647 tggaagcccatcaccgccgcagttcacgccaagggcg 14683
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 ctgcagcccggcggcgccgcg 436 ||||||||||||||||||||| Sbjct: 1495904 ctgcagcccggcggcgccgcg 1495924
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 tggtgctggcgccgctgacg 163 |||||||||||||||||||| Sbjct: 2631980 tggtgctggcgccgctgacg 2631961
>ref|NM_125110.4| Arabidopsis thaliana S-adenosylmethionine-dependent methyltransferase AT5G57280 mRNA, complete cds Length = 1099 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 14 tcttcttcttcctcctctgc 33
>gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, complete sequence Length = 177038 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 142565 tcttcttcttcctcctctgc 142584
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tcttcttcctcctctgccat 40 |||||||||||||||||||| Sbjct: 3597406 tcttcttcctcctctgccat 3597425
>gb|AC168055.3| Mus musculus BAC clone RP24-360I1 from chromosome 10, complete sequence Length = 206775 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 991 tcttcttcttcctcctctgc 972
>ref|NM_192983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaagcccatcgtcgccgccg 350 |||||||||||||||||||| Sbjct: 585 gaagcccatcgtcgccgccg 566
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 132349 tcttcttcttcctcctctgc 132368
>gb|AC104873.7| Mus musculus chromosome 1, clone RP23-434G18, complete sequence Length = 205266 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 138590 tcttcttcttcctcctctgc 138571
>gb|AC102825.6| Mus musculus chromosome 15, clone RP24-227B12, complete sequence Length = 153145 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 121415 tcttcttcttcctcctctgc 121396
>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on chromosome 15 Length = 755217 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gagcacggagaagggggtgggccc 468 |||||||||||||||| ||||||| Sbjct: 410720 gagcacggagaaggggttgggccc 410697
>ref|XM_864872.1| PREDICTED: Bos taurus similar to Parathymosin (LOC613777), mRNA Length = 819 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 161 tcttcttcttcctcctctgc 142
>gb|AC160465.3| Mus musculus chromosome 8, clone RP23-267N9, complete sequence Length = 224985 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 164294 tcttcttcttcctcctctgc 164313
>gb|AY813019.1| Schistosoma japonicum SJCHGC09485 protein mRNA, complete cds Length = 643 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcatcagtcttcttcttcctcctc 34 |||| ||||||||||||||||||| Sbjct: 193 tcattagtcttcttcttcctcctc 216
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 326 gcgtggaagcccatcgtcgccgccgtgcacgccaagggcg 365 |||||||||| |||||||| | |||||||||||| |||| Sbjct: 2412628 gcgtggaagcgcatcgtcgacttcgtgcacgccaacggcg 2412589
>gb|AC125324.4| Mus musculus BAC clone RP23-284J23 from chromosome 1, complete sequence Length = 168982 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 19829 tcttcttcttcctcctctgc 19810
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cttcgagctgcagcccggcg 428 |||||||||||||||||||| Sbjct: 2901546 cttcgagctgcagcccggcg 2901565 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 tacgcccagcgcgccaccgccggc 235 |||| ||||||||||||||||||| Sbjct: 1597026 tacggccagcgcgccaccgccggc 1597003
>gb|AC134545.5| Mus musculus BAC clone RP24-470H2 from chromosome 18, complete sequence Length = 155887 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 64707 tcttcttcttcctcctctgc 64726
>gb|AC129016.4| Mus musculus BAC clone RP24-389J11 from chromosome 10, complete sequence Length = 160180 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 45530 tcttcttcttcctcctctgc 45511
>gb|AC126555.3| Mus musculus BAC clone RP23-474A17 from chromosome 13, complete sequence Length = 187704 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 172500 tcttcttcttcctcctctgc 172519
>ref|XM_814542.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511001.160) partial mRNA Length = 11763 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 7949 tcttcttcttcctcctctgc 7930
>ref|XM_815215.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506245.270) partial mRNA Length = 897 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agtcttcttcttcctcctct 35 |||||||||||||||||||| Sbjct: 388 agtcttcttcttcctcctct 369
>ref|XM_809957.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506957.23) partial mRNA Length = 8777 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 8240 tcttcttcttcctcctctgc 8221
>gb|AC115119.5| Mus musculus BAC clone RP23-87M19 from 18, complete sequence Length = 174491 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cttcttcttcctcctctgcc 38 |||||||||||||||||||| Sbjct: 92652 cttcttcttcctcctctgcc 92633
>gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, complete sequence Length = 195428 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 49549 tcttcttcttcctcctctgc 49530
>gb|AC118198.7| Mus musculus chromosome 10, clone RP23-179O14, complete sequence Length = 225267 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 112412 tcttcttcttcctcctctgc 112431
>gb|AC102647.8| Mus musculus chromosome 10, clone RP23-269A24, complete sequence Length = 201670 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 160268 tcttcttcttcctcctctgc 160249
>ref|XM_661959.1| Cryptosporidium hominis TU502 trehalose synthase (Chro.80565) partial mRNA Length = 4197 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgccatt 41 ||||||||||||||||| |||||| Sbjct: 3223 tcttcttcttcctcctcagccatt 3246
>gb|AC160124.3| Mus musculus BAC clone RP23-297P22 from chromosome 9, complete sequence Length = 182831 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 catcagtcttcttcttcctcctct 35 ||||||||||| |||||||||||| Sbjct: 23981 catcagtcttcctcttcctcctct 24004
>emb|AL391427.9| Human DNA sequence from clone RP11-499O7 on chromosome 10 Contains the 5' end of the AKR1C2 gene for aldo-keto reductase family 1 member C2, a novel gene, the AKR1C3 gene for aldo-keto reductase family 1 member C3, two aldo-keto reductase pseudogenes and the 3' end of the gene for a novel protein similar to aldo-keto reductase, complete sequence Length = 166974 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caccactcatcagtcttctt 24 |||||||||||||||||||| Sbjct: 97091 caccactcatcagtcttctt 97072
>gb|AY121766.1| Crocidura russula alpha adrenergic receptor 2B gene, partial cds Length = 1186 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 864 tcttcttcttcctcctctgc 845
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 cgagctgcagcccggcggcgccgcgccg 439 |||| ||||| ||||||||||||||||| Sbjct: 2569895 cgagatgcaggccggcggcgccgcgccg 2569922
>gb|AY065258.1| Arabidopsis thaliana putative protein carboxyl methylase (At5g57280) mRNA, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 14 tcttcttcttcctcctctgc 33
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 taccttcgagctgcagcccg 425 |||||||||||||||||||| Sbjct: 94198 taccttcgagctgcagcccg 94179
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 taccttcgagctgcagcccg 425 |||||||||||||||||||| Sbjct: 98162 taccttcgagctgcagcccg 98143
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 taccttcgagctgcagcccg 425 |||||||||||||||||||| Sbjct: 290067 taccttcgagctgcagcccg 290048
>gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13, complete sequence Length = 188657 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cttcttcttcctcctctgcc 38 |||||||||||||||||||| Sbjct: 76009 cttcttcttcctcctctgcc 75990
>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project) Length = 79153 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 51399 tcttcttcttcctcctctgc 51418
>gb|AC157019.8| Mus musculus 10 BAC RP24-377N13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 233155 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 165173 tcttcttcttcctcctctgc 165192
>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE Length = 117135 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gagcacgtcgaggcgtggaa 333 |||||||||||||||||||| Sbjct: 61484 gagcacgtcgaggcgtggaa 61465
>emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 in linkage group 22, complete sequence Length = 201928 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 185 gtgccgcagccgcacgccgccgtgtact 212 ||||||||||||| ||||||||| |||| Sbjct: 24813 gtgccgcagccgcccgccgccgtctact 24786
>gb|AC124303.5| Homo sapiens chromosome 15, clone RP11-145P16, complete sequence Length = 160535 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 gagcacggagaagggggtgggccc 468 |||||||||||||||| ||||||| Sbjct: 67539 gagcacggagaaggggttgggccc 67562
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 tacgcccagcgcgccaccgccggc 235 |||| ||||||||||||||||||| Sbjct: 1981827 tacggccagcgcgccaccgccggc 1981804
>dbj|AB087688.1| Mycobacterium chelonae dnaA gene for DnaA, partial cds Length = 528 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 196 gcacgccgccgtgtactacgcccagcgc 223 ||||||||||| | |||||||||||||| Sbjct: 467 gcacgccgccgggaactacgcccagcgc 494
>gb|AE011874.1| Xanthomonas axonopodis pv. citri str. 306, section 252 of 469 of the complete genome Length = 10375 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cttcgagctgcagcccggcg 428 |||||||||||||||||||| Sbjct: 7422 cttcgagctgcagcccggcg 7441
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agtcttcttcttcctcctct 35 |||||||||||||||||||| Sbjct: 2344613 agtcttcttcttcctcctct 2344594
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 catcgccgaggccacggggg 263 |||||||||||||||||||| Sbjct: 4576032 catcgccgaggccacggggg 4576051
>gb|AC007233.7| Arabidopsis thaliana chromosome 2 clone T25M19 map ve013, complete sequence Length = 39858 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gtcttcttcttcctcctctg 36 |||||||||||||||||||| Sbjct: 20745 gtcttcttcttcctcctctg 20726
>ref|XM_692858.1| PREDICTED: Danio rerio similar to tweety 1 isoform 1 (LOC569465), mRNA Length = 1926 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 389 tcttcttcttcctcctctgc 370
>gb|AF250841.1|AF250841 Homo sapiens PAC clones A17157 and P0950 imprinted HBII-85 and HBII-52 small nucleolar RNA genes, complete sequence Length = 228017 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gagcacggagaagggggtgggccc 468 |||||||||||||||| ||||||| Sbjct: 104001 gagcacggagaaggggttgggccc 103978
>gb|AC159327.8| Mus musculus 10 BAC RP23-207L3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215004 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 64645 tcttcttcttcctcctctgc 64626
>gb|AC153133.4| Mus musculus BAC clone RP24-389O11 from chromosome 13, complete sequence Length = 157007 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 45060 tcttcttcttcctcctctgc 45079
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 9 actcatcagtcttcttcttcctcctctg 36 |||| |||| |||||||||||||||||| Sbjct: 24833180 actcctcagccttcttcttcctcctctg 24833153
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 tggacggcggagcacgtcgaggcg 328 |||||||||||||||| ||||||| Sbjct: 23551080 tggacggcggagcacggcgaggcg 23551103
>emb|AL928695.23| Zebrafish DNA sequence from clone CH211-217M19 in linkage group 16, complete sequence Length = 215878 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 24320 tcttcttcttcctcctctgc 24301
>emb|BX833918.1|CNS09Z27 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1013 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 2 tcttcttcttcctcctctgc 21
>gb|AC102574.9| Mus musculus chromosome 8, clone RP23-239K24, complete sequence Length = 193168 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 28875 tcttcttcttcctcctctgc 28856
>gb|AE004851.1| Pseudomonas aeruginosa PAO1, section 412 of 529 of the complete genome Length = 13101 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 gccgtgtactacgcccagcgcgcc 226 |||| ||||||||||||||||||| Sbjct: 9182 gccgagtactacgcccagcgcgcc 9205
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gcccggcggcgccgcgccgc 440 |||||||||||||||||||| Sbjct: 1089872 gcccggcggcgccgcgccgc 1089853
>gb|AC122281.2| Mus musculus chromosome 16 clone RP23-239I17, complete sequence Length = 204608 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 113188 tcttcttcttcctcctctgc 113169
>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672C09 Length = 145655 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaagcccatcgtcgccgccg 350 |||||||||||||||||||| Sbjct: 11557 gaagcccatcgtcgccgccg 11538
>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013G02 Length = 163419 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaagcccatcgtcgccgccg 350 |||||||||||||||||||| Sbjct: 84689 gaagcccatcgtcgccgccg 84670
>gb|AC109146.26| Mus musculus chromosome 8, clone RP23-54G23, complete sequence Length = 197868 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 42795 tcttcttcttcctcctctgc 42814
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 tggacggcggagcacgtcgaggcg 328 |||||||||||||||| ||||||| Sbjct: 3521 tggacggcggagcacggcgaggcg 3544
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 tggacggcggagcacgtcgaggcg 328 |||||||||||||||| ||||||| Sbjct: 111473 tggacggcggagcacggcgaggcg 111496
>dbj|AB019233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB24 Length = 58589 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 28521 tcttcttcttcctcctctgc 28540
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221267 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 193932 tcttcttcttcctcctctgc 193913
>emb|Y09113.1|MMY09113 M.macrocarpa mRNA for dioxygenase Length = 1479 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gtcttcttcttcctcctctg 36 |||||||||||||||||||| Sbjct: 204 gtcttcttcttcctcctctg 223
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 200 gccgccgtgtactacgcccagcgcgcca 227 ||||||| ||||||||||||||||||| Sbjct: 558550 gccgccgactactacgcccagcgcgcca 558523 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 agcccatcgtcgccgccgtg 352 |||||||||||||||||||| Sbjct: 40902 agcccatcgtcgccgccgtg 40921
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 gtactacgcccagcgcgccaccgc 231 ||||||||| |||||||||||||| Sbjct: 1270681 gtactacgcgcagcgcgccaccgc 1270704
>gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, complete sequence Length = 175641 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 74976 tcttcttcttcctcctctgc 74995
>gb|AC114594.15| Mus musculus chromosome 1, clone RP23-81J19, complete sequence Length = 144466 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 110136 tcttcttcttcctcctctgc 110117
>gb|AC153829.7| Mus musculus 10 BAC RP23-116E8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188043 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 53689 tcttcttcttcctcctctgc 53708
>emb|AL157957.4|CNS01RGF Human chromosome 14 DNA sequence BAC R-969O13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 202212 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cagtcttcttcttcctcctc 34 |||||||||||||||||||| Sbjct: 92228 cagtcttcttcttcctcctc 92247
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 tacgcccagcgcgccaccgccggc 235 |||| ||||||||||||||||||| Sbjct: 2003860 tacggccagcgcgccaccgccggc 2003837
>emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chromosome 17, complete sequence Length = 157729 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 12255 tcttcttcttcctcctctgc 12236
>gb|AC155832.2| Mus musculus 10 BAC RP24-147J7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 153257 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 105956 tcttcttcttcctcctctgc 105937
>gb|AC123677.6| Mus musculus chromosome 15, clone RP23-275M16, complete sequence Length = 149858 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 29583 tcttcttcttcctcctctgc 29602
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 9 actcatcagtcttcttcttcctcctctg 36 |||| |||| |||||||||||||||||| Sbjct: 24761386 actcctcagccttcttcttcctcctctg 24761359
>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132741 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 actcatcagtcttcttcttcctcctctg 36 |||| |||| |||||||||||||||||| Sbjct: 131688 actcctcagccttcttcttcctcctctg 131715
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 9 actcatcagtcttcttcttcctcctctg 36 |||| |||| |||||||||||||||||| Sbjct: 140337 actcctcagccttcttcttcctcctctg 140310
>gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, complete sequence Length = 151011 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 48606 tcttcttcttcctcctctgc 48625
>gb|DQ294584.1| Polychytrium aggregatum isolate AFTOL-ID-24 RNA polymerase II largest subunit (RPB1) gene, partial cds Length = 3389 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gcccatcgtcgccgccgtgc 353 |||||||||||||||||||| Sbjct: 389 gcccatcgtcgccgccgtgc 370
>gb|AC153843.6| Mus musculus 10 BAC RP23-273P15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202968 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 174059 tcttcttcttcctcctctgc 174078
>emb|CT030709.6| Mouse DNA sequence from clone RP23-268C22 on chromosome 9, complete sequence Length = 206089 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 catcagtcttcttcttcctcctct 35 ||||||||||| |||||||||||| Sbjct: 96237 catcagtcttcctcttcctcctct 96214
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 attcaggtcttcggcaatgg 86 |||||||||||||||||||| Sbjct: 10733 attcaggtcttcggcaatgg 10752
>emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on chromosome 4, complete sequence Length = 182829 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 91805 tcttcttcttcctcctctgc 91786
>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete sequence Length = 160615 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttcttcttcctcctctgc 37 |||||||||||||||||||| Sbjct: 16001 tcttcttcttcctcctctgc 15982 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,747,917 Number of Sequences: 3902068 Number of extensions: 4747917 Number of successful extensions: 161648 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 157226 Number of HSP's gapped (non-prelim): 4410 length of query: 470 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 448 effective length of database: 17,147,199,772 effective search space: 7681945497856 effective search space used: 7681945497856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
