ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart49e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MSBP1_ARATH (Q9XFM6) Membrane steroid-binding protein 1 (AtMP1) 179 5e-45
2SBP2_ARATH (Q9M2Z4) Putative steroid binding protein 2 (AtMP2) 176 3e-44
3NENF_MOUSE (Q9CQ45) Neudesin precursor (Neuron-derived neurotrop... 87 4e-17
4SBP3_ARATH (Q9SK39) Putative steroid-binding protein 3 (AtMP3) 86 7e-17
5NENF_RAT (Q6IUR5) Neudesin precursor (Neuron-derived neurotrophi... 86 7e-17
6NENF_HUMAN (Q9UMX5) Neudesin precursor (Neuron-derived neurotrop... 82 8e-16
7PGRC1_RAT (P70580) Membrane-associated progesterone receptor com... 72 1e-12
8PGRC1_PIG (Q95250) Membrane-associated progesterone receptor com... 70 4e-12
9PGRC1_MOUSE (O55022) Membrane-associated progesterone receptor c... 70 4e-12
10PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor c... 68 2e-11
11PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor c... 67 3e-11
12PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor c... 67 3e-11
13PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor com... 67 3e-11
14YL81_SCHPO (O13995) Hypothetical protein C25B8.01 in chromosome I 63 5e-10
15DAP1_YEAST (Q12091) Damage response protein 1 60 3e-09
16GLPK_XANCP (Q8PDI0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ... 30 5.9
17GLPK_XANAC (Q8PQG7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ... 29 7.7
18DX26B_MOUSE (Q8BND4) Protein DDX26B 29 7.7
19Y3770_BACSK (Q5WBF8) UPF0271 protein ABC3770 29 10.0
20GLPK_ENTFA (O34154) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ... 29 10.0

>MSBP1_ARATH (Q9XFM6) Membrane steroid-binding protein 1 (AtMP1)|
          Length = 220

 Score =  179 bits (454), Expect = 5e-45
 Identities = 95/152 (62%), Positives = 104/152 (68%), Gaps = 5/152 (3%)
 Frame = +2

Query: 107 ELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXXXX 286
           ELW+TLK+AI AYTGLSP            +Y V+SG FA                    
Sbjct: 4   ELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEE 63

Query: 287 X-----VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKD 451
                 VQ+GE+ EEEL+QYDGSDP+KPLLMAIK QIYDVTQSRMFYGPGGPYALFA KD
Sbjct: 64  PPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKD 123

Query: 452 ASRALAKMSFEPQDLNGDTSGLGPFELDALQD 547
           ASRALAKMSFE +DL  D SGLGPFELDALQD
Sbjct: 124 ASRALAKMSFEEKDLTWDVSGLGPFELDALQD 155



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>SBP2_ARATH (Q9M2Z4) Putative steroid binding protein 2 (AtMP2)|
          Length = 233

 Score =  176 bits (447), Expect = 3e-44
 Identities = 94/150 (62%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
 Frame = +2

Query: 101 VAELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXX 280
           V ++WETLK+ I AYTGLSP            +Y VVSG F                   
Sbjct: 2   VQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP 61

Query: 281 XXX-VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDAS 457
               VQLGE+ EEEL+ YDGSD KKPLLMAIKGQIYDV+QSRMFYGPGGPYALFA KDAS
Sbjct: 62  LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDAS 121

Query: 458 RALAKMSFEPQDLNGDTSGLGPFELDALQD 547
           RALAKMSFE QDL GD SGLG FEL+ALQD
Sbjct: 122 RALAKMSFEDQDLTGDISGLGAFELEALQD 151



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>NENF_MOUSE (Q9CQ45) Neudesin precursor (Neuron-derived neurotrophic factor)|
           (Secreted protein of unknown function) (SPUF protein)
          Length = 171

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 40/79 (50%), Positives = 54/79 (68%)
 Frame = +2

Query: 311 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQ 490
           EEEL +Y G +  +P+ +A+KG ++DVT  + FYG G PY   A KD+SR +AKMS +P 
Sbjct: 48  EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107

Query: 491 DLNGDTSGLGPFELDALQD 547
           DL  DT+GL   EL+AL D
Sbjct: 108 DLTHDTTGLTAKELEALDD 126



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>SBP3_ARATH (Q9SK39) Putative steroid-binding protein 3 (AtMP3)|
          Length = 100

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 40/82 (48%), Positives = 56/82 (68%)
 Frame = +2

Query: 302 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSF 481
           E   E+L QY+G+D  KP+ +AIKG+++DVT  + FYG GG Y++FA KDASRAL KMS 
Sbjct: 2   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61

Query: 482 EPQDLNGDTSGLGPFELDALQD 547
             +D++    GL   E++ L D
Sbjct: 62  NEEDVSPSLEGLTEKEINTLND 83



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>NENF_RAT (Q6IUR5) Neudesin precursor (Neuron-derived neurotrophic factor)|
           (Spinal cord injury-related protein 10) (SCIRP10-related
           protein)
          Length = 171

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +2

Query: 311 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQ 490
           EEEL +Y G +  +P+ +A+KG ++DVT  + FYG G PY   A KD+SR +AKMS +P 
Sbjct: 48  EEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107

Query: 491 DLNGDTSGLGPFELDALQD 547
           DL  D SGL   EL+AL D
Sbjct: 108 DLTHDISGLTAKELEALDD 126



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>NENF_HUMAN (Q9UMX5) Neudesin precursor (Neuron-derived neurotrophic factor)|
           (Secreted protein of unknown function) (SPUF protein)
          Length = 172

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +2

Query: 311 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQ 490
           EEEL +Y G +  +P+ +A+KG ++DVT  + FYG G PY     KD++R +AKMS +P 
Sbjct: 49  EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPA 108

Query: 491 DLNGDTSGLGPFELDALQD 547
           DL  DT+GL   EL+AL +
Sbjct: 109 DLTHDTTGLTAKELEALDE 127



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>PGRC1_RAT (P70580) Membrane-associated progesterone receptor component 1|
           (Acidic 25 kDa protein) (25-DX)
          Length = 194

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
 Frame = +2

Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493
           ELR+YDG  DP+  +LMAI G+++DVT+ R FYGP GPY +FA +DASR LA    + + 
Sbjct: 76  ELRRYDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133

Query: 494 LN---GDTSGLGPFELDALQD 547
           L     D S L P + + L D
Sbjct: 134 LKDEYDDLSDLTPAQQETLND 154



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>PGRC1_PIG (Q95250) Membrane-associated progesterone receptor component 1|
          Length = 193

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
 Frame = +2

Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493
           ELR++DG  DP+  +LMAI G+++DVT+ R FYGP GPY +FA +DASR LA    + + 
Sbjct: 75  ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 132

Query: 494 LN---GDTSGLGPFELDALQD 547
           L     D S L P + + L D
Sbjct: 133 LKDEYDDLSDLTPAQQETLND 153



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>PGRC1_MOUSE (O55022) Membrane-associated progesterone receptor component 1|
          Length = 194

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
 Frame = +2

Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493
           ELR++DG  DP+  +LMAI G+++DVT+ R FYGP GPY +FA +DASR LA    + + 
Sbjct: 76  ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133

Query: 494 LN---GDTSGLGPFELDALQD 547
           L     D S L P + + L D
Sbjct: 134 LKDEYDDLSDLTPAQQETLSD 154



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>PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor component 2|
           (Progesterone membrane-binding protein) (Steroid
           receptor protein DG6)
          Length = 223

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 34/77 (44%), Positives = 50/77 (64%)
 Frame = +2

Query: 314 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493
           E+LRQYDGS   + +L+A+ G+++DVT+   FYGP GPY +FA +DASR LA    +   
Sbjct: 106 EQLRQYDGSRNPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164

Query: 494 LNGDTSGLGPFELDALQ 544
           L  +   L   +L+A+Q
Sbjct: 165 LRDEYDDLS--DLNAVQ 179



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>PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor component 2|
           (Fragment)
          Length = 214

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 33/77 (42%), Positives = 50/77 (64%)
 Frame = +2

Query: 314 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493
           E+LRQYDG+   + +L+A+ G+++DVT+   FYGP GPY +FA +DASR LA    +   
Sbjct: 97  EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 155

Query: 494 LNGDTSGLGPFELDALQ 544
           L  +   L   +L+A+Q
Sbjct: 156 LRDEYDDLS--DLNAVQ 170



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>PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor component 1|
           (mPR)
          Length = 194

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
 Frame = +2

Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493
           ELR++DG  DP+  +LMAI G+++DVT+ R FYGP GPY +FA +DASR LA    + + 
Sbjct: 76  ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133

Query: 494 LN---GDTSGLGPFELDALQD 547
           L     D S L   + + L D
Sbjct: 134 LKDEYDDLSDLTAAQQETLSD 154



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>PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor component 2|
          Length = 217

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 33/77 (42%), Positives = 50/77 (64%)
 Frame = +2

Query: 314 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493
           E+LRQYDG+   + +L+A+ G+++DVT+   FYGP GPY +FA +DASR LA    +   
Sbjct: 100 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 158

Query: 494 LNGDTSGLGPFELDALQ 544
           L  +   L   +L+A+Q
Sbjct: 159 LRDEYDDLS--DLNAVQ 173



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>YL81_SCHPO (O13995) Hypothetical protein C25B8.01 in chromosome I|
          Length = 166

 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
 Frame = +2

Query: 317 ELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQDL 496
           EL++Y+GS     + +AIKG +Y+VT    FYGP GPY+ FA  DASR LAK SF+ + +
Sbjct: 47  ELKEYNGSK-NSLVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDEFI 105

Query: 497 N-------GDTSGLGPFELDALQD 547
                    D S L   E  AL D
Sbjct: 106 PDSDAEELDDCSDLNDEERQALND 129



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>DAP1_YEAST (Q12091) Damage response protein 1|
          Length = 152

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = +2

Query: 290 VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALA 469
           V  G      L +++G D +K + +AI+G++YD T+ R FYGP GPY  FA  DASR LA
Sbjct: 39  VVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLA 97

Query: 470 KMSFE 484
             SF+
Sbjct: 98  LNSFD 102



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>GLPK_XANCP (Q8PDI0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 499

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = +2

Query: 302 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSF 481
           E D E L   D      P + +   ++Y +TQ++ FYG   P A  A    +    +  F
Sbjct: 198 EWDAELLEMLDVPAQMLPEVRS-SSEVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACF 256

Query: 482 EPQDLNGDTSGLGPFEL 532
           EP  +  +T G G F L
Sbjct: 257 EP-GMAKNTYGTGCFML 272



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>GLPK_XANAC (Q8PQG7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 499

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +2

Query: 377 QIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQDLNGDTSGLGPFEL 532
           ++Y +TQ++ FYG   P A  A    +    +  FEP  +  +T G G F L
Sbjct: 222 EVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACFEP-GMAKNTYGTGCFML 272



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>DX26B_MOUSE (Q8BND4) Protein DDX26B|
          Length = 861

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
 Frame = -2

Query: 548 SLVVRRARTAQGPKYHRSGPGARKTSWLELCWRLCQR-IGHK----VHQVH 411
           SL++RRA+TA     H  G G    SW   C  L +   GH     +H  H
Sbjct: 628 SLLLRRAQTAPTVTNHVGGKGPLSASWFPSCPSLVKHTFGHPDTTVIHDTH 678



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>Y3770_BACSK (Q5WBF8) UPF0271 protein ABC3770|
          Length = 253

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +2

Query: 329 YDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQDLNGDT 508
           Y+ +   + L  AI   +YDV  + +FYG  G   + A K A    A   F  +    D 
Sbjct: 116 YNMAAADQALAEAIANAVYDVDPNLVFYGLAGSALIAAGKKAGLKTASEVFADRTYQADG 175

Query: 509 S 511
           S
Sbjct: 176 S 176



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>GLPK_ENTFA (O34154) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 500

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 377 QIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQDLNGDTSGLGPF 526
           ++Y +T++  FYG   P A  A    +    +M+FEP  +  +T G G F
Sbjct: 221 EVYGLTKNYHFYGSEVPIAGMAGDQQAALFGQMAFEP-GMVKNTYGTGSF 269


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,998,518
Number of Sequences: 219361
Number of extensions: 971840
Number of successful extensions: 2749
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2743
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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