Clone Name | bart49e05 |
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Clone Library Name | barley_pub |
>MSBP1_ARATH (Q9XFM6) Membrane steroid-binding protein 1 (AtMP1)| Length = 220 Score = 179 bits (454), Expect = 5e-45 Identities = 95/152 (62%), Positives = 104/152 (68%), Gaps = 5/152 (3%) Frame = +2 Query: 107 ELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXXXX 286 ELW+TLK+AI AYTGLSP +Y V+SG FA Sbjct: 4 ELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEE 63 Query: 287 X-----VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKD 451 VQ+GE+ EEEL+QYDGSDP+KPLLMAIK QIYDVTQSRMFYGPGGPYALFA KD Sbjct: 64 PPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKD 123 Query: 452 ASRALAKMSFEPQDLNGDTSGLGPFELDALQD 547 ASRALAKMSFE +DL D SGLGPFELDALQD Sbjct: 124 ASRALAKMSFEEKDLTWDVSGLGPFELDALQD 155
>SBP2_ARATH (Q9M2Z4) Putative steroid binding protein 2 (AtMP2)| Length = 233 Score = 176 bits (447), Expect = 3e-44 Identities = 94/150 (62%), Positives = 102/150 (68%), Gaps = 1/150 (0%) Frame = +2 Query: 101 VAELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXX 280 V ++WETLK+ I AYTGLSP +Y VVSG F Sbjct: 2 VQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP 61 Query: 281 XXX-VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDAS 457 VQLGE+ EEEL+ YDGSD KKPLLMAIKGQIYDV+QSRMFYGPGGPYALFA KDAS Sbjct: 62 LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDAS 121 Query: 458 RALAKMSFEPQDLNGDTSGLGPFELDALQD 547 RALAKMSFE QDL GD SGLG FEL+ALQD Sbjct: 122 RALAKMSFEDQDLTGDISGLGAFELEALQD 151
>NENF_MOUSE (Q9CQ45) Neudesin precursor (Neuron-derived neurotrophic factor)| (Secreted protein of unknown function) (SPUF protein) Length = 171 Score = 86.7 bits (213), Expect = 4e-17 Identities = 40/79 (50%), Positives = 54/79 (68%) Frame = +2 Query: 311 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQ 490 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY A KD+SR +AKMS +P Sbjct: 48 EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107 Query: 491 DLNGDTSGLGPFELDALQD 547 DL DT+GL EL+AL D Sbjct: 108 DLTHDTTGLTAKELEALDD 126
>SBP3_ARATH (Q9SK39) Putative steroid-binding protein 3 (AtMP3)| Length = 100 Score = 85.9 bits (211), Expect = 7e-17 Identities = 40/82 (48%), Positives = 56/82 (68%) Frame = +2 Query: 302 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSF 481 E E+L QY+G+D KP+ +AIKG+++DVT + FYG GG Y++FA KDASRAL KMS Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61 Query: 482 EPQDLNGDTSGLGPFELDALQD 547 +D++ GL E++ L D Sbjct: 62 NEEDVSPSLEGLTEKEINTLND 83
>NENF_RAT (Q6IUR5) Neudesin precursor (Neuron-derived neurotrophic factor)| (Spinal cord injury-related protein 10) (SCIRP10-related protein) Length = 171 Score = 85.9 bits (211), Expect = 7e-17 Identities = 40/79 (50%), Positives = 53/79 (67%) Frame = +2 Query: 311 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQ 490 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY A KD+SR +AKMS +P Sbjct: 48 EEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107 Query: 491 DLNGDTSGLGPFELDALQD 547 DL D SGL EL+AL D Sbjct: 108 DLTHDISGLTAKELEALDD 126
>NENF_HUMAN (Q9UMX5) Neudesin precursor (Neuron-derived neurotrophic factor)| (Secreted protein of unknown function) (SPUF protein) Length = 172 Score = 82.4 bits (202), Expect = 8e-16 Identities = 37/79 (46%), Positives = 53/79 (67%) Frame = +2 Query: 311 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQ 490 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY KD++R +AKMS +P Sbjct: 49 EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPA 108 Query: 491 DLNGDTSGLGPFELDALQD 547 DL DT+GL EL+AL + Sbjct: 109 DLTHDTTGLTAKELEALDE 127
>PGRC1_RAT (P70580) Membrane-associated progesterone receptor component 1| (Acidic 25 kDa protein) (25-DX) Length = 194 Score = 71.6 bits (174), Expect = 1e-12 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 4/81 (4%) Frame = +2 Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493 ELR+YDG DP+ +LMAI G+++DVT+ R FYGP GPY +FA +DASR LA + + Sbjct: 76 ELRRYDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 494 LN---GDTSGLGPFELDALQD 547 L D S L P + + L D Sbjct: 134 LKDEYDDLSDLTPAQQETLND 154
>PGRC1_PIG (Q95250) Membrane-associated progesterone receptor component 1| Length = 193 Score = 70.1 bits (170), Expect = 4e-12 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 4/81 (4%) Frame = +2 Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FA +DASR LA + + Sbjct: 75 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 132 Query: 494 LN---GDTSGLGPFELDALQD 547 L D S L P + + L D Sbjct: 133 LKDEYDDLSDLTPAQQETLND 153
>PGRC1_MOUSE (O55022) Membrane-associated progesterone receptor component 1| Length = 194 Score = 70.1 bits (170), Expect = 4e-12 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 4/81 (4%) Frame = +2 Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FA +DASR LA + + Sbjct: 76 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 494 LN---GDTSGLGPFELDALQD 547 L D S L P + + L D Sbjct: 134 LKDEYDDLSDLTPAQQETLSD 154
>PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor component 2| (Progesterone membrane-binding protein) (Steroid receptor protein DG6) Length = 223 Score = 67.8 bits (164), Expect = 2e-11 Identities = 34/77 (44%), Positives = 50/77 (64%) Frame = +2 Query: 314 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493 E+LRQYDGS + +L+A+ G+++DVT+ FYGP GPY +FA +DASR LA + Sbjct: 106 EQLRQYDGSRNPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164 Query: 494 LNGDTSGLGPFELDALQ 544 L + L +L+A+Q Sbjct: 165 LRDEYDDLS--DLNAVQ 179
>PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor component 2| (Fragment) Length = 214 Score = 67.0 bits (162), Expect = 3e-11 Identities = 33/77 (42%), Positives = 50/77 (64%) Frame = +2 Query: 314 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493 E+LRQYDG+ + +L+A+ G+++DVT+ FYGP GPY +FA +DASR LA + Sbjct: 97 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 155 Query: 494 LNGDTSGLGPFELDALQ 544 L + L +L+A+Q Sbjct: 156 LRDEYDDLS--DLNAVQ 170
>PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor component 1| (mPR) Length = 194 Score = 67.0 bits (162), Expect = 3e-11 Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 4/81 (4%) Frame = +2 Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FA +DASR LA + + Sbjct: 76 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 494 LN---GDTSGLGPFELDALQD 547 L D S L + + L D Sbjct: 134 LKDEYDDLSDLTAAQQETLSD 154
>PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor component 2| Length = 217 Score = 67.0 bits (162), Expect = 3e-11 Identities = 33/77 (42%), Positives = 50/77 (64%) Frame = +2 Query: 314 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQD 493 E+LRQYDG+ + +L+A+ G+++DVT+ FYGP GPY +FA +DASR LA + Sbjct: 100 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 158 Query: 494 LNGDTSGLGPFELDALQ 544 L + L +L+A+Q Sbjct: 159 LRDEYDDLS--DLNAVQ 173
>YL81_SCHPO (O13995) Hypothetical protein C25B8.01 in chromosome I| Length = 166 Score = 63.2 bits (152), Expect = 5e-10 Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 7/84 (8%) Frame = +2 Query: 317 ELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQDL 496 EL++Y+GS + +AIKG +Y+VT FYGP GPY+ FA DASR LAK SF+ + + Sbjct: 47 ELKEYNGSK-NSLVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDEFI 105 Query: 497 N-------GDTSGLGPFELDALQD 547 D S L E AL D Sbjct: 106 PDSDAEELDDCSDLNDEERQALND 129
>DAP1_YEAST (Q12091) Damage response protein 1| Length = 152 Score = 60.5 bits (145), Expect = 3e-09 Identities = 30/65 (46%), Positives = 41/65 (63%) Frame = +2 Query: 290 VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALA 469 V G L +++G D +K + +AI+G++YD T+ R FYGP GPY FA DASR LA Sbjct: 39 VVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLA 97 Query: 470 KMSFE 484 SF+ Sbjct: 98 LNSFD 102
>GLPK_XANCP (Q8PDI0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 29.6 bits (65), Expect = 5.9 Identities = 23/77 (29%), Positives = 34/77 (44%) Frame = +2 Query: 302 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSF 481 E D E L D P + + ++Y +TQ++ FYG P A A + + F Sbjct: 198 EWDAELLEMLDVPAQMLPEVRS-SSEVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACF 256 Query: 482 EPQDLNGDTSGLGPFEL 532 EP + +T G G F L Sbjct: 257 EP-GMAKNTYGTGCFML 272
>GLPK_XANAC (Q8PQG7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +2 Query: 377 QIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQDLNGDTSGLGPFEL 532 ++Y +TQ++ FYG P A A + + FEP + +T G G F L Sbjct: 222 EVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACFEP-GMAKNTYGTGCFML 272
>DX26B_MOUSE (Q8BND4) Protein DDX26B| Length = 861 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = -2 Query: 548 SLVVRRARTAQGPKYHRSGPGARKTSWLELCWRLCQR-IGHK----VHQVH 411 SL++RRA+TA H G G SW C L + GH +H H Sbjct: 628 SLLLRRAQTAPTVTNHVGGKGPLSASWFPSCPSLVKHTFGHPDTTVIHDTH 678
>Y3770_BACSK (Q5WBF8) UPF0271 protein ABC3770| Length = 253 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/61 (29%), Positives = 26/61 (42%) Frame = +2 Query: 329 YDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQDLNGDT 508 Y+ + + L AI +YDV + +FYG G + A K A A F + D Sbjct: 116 YNMAAADQALAEAIANAVYDVDPNLVFYGLAGSALIAAGKKAGLKTASEVFADRTYQADG 175 Query: 509 S 511 S Sbjct: 176 S 176
>GLPK_ENTFA (O34154) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 500 Score = 28.9 bits (63), Expect = 10.0 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +2 Query: 377 QIYDVTQSRMFYGPGGPYALFADKDASRALAKMSFEPQDLNGDTSGLGPF 526 ++Y +T++ FYG P A A + +M+FEP + +T G G F Sbjct: 221 EVYGLTKNYHFYGSEVPIAGMAGDQQAALFGQMAFEP-GMVKNTYGTGSF 269 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,998,518 Number of Sequences: 219361 Number of extensions: 971840 Number of successful extensions: 2749 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2669 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2743 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)