ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49e05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197219.1| Oryza sativa (japonica cultivar-group) putative steroid membrane binding protein (OSJNBb0073N24.4), mRNA Length = 909 Score = 478 bits (241), Expect = e-131 Identities = 360/399 (90%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 97 ggcggtggcggagctctgggagacgctgaagcaggcgatcttagcgtacacggggctgtc 156 ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 9 ggcggtggcggagctgtgggagacgctgaagcaggcgatcgtggcgtacacggggctgtc 68 Query: 157 cccgacggccttcttcaccgccgtggcagtcgccgccgcgctgtaccacgtcgtctcggg 216 ||| |||| ||||||||||||||||| | || || ||||||||||||||||| ||||| Sbjct: 69 gccggcggcgttcttcaccgccgtggcggcggcggcggcgctgtaccacgtcgtgtcggg 128 Query: 217 gatcttcgcg---ccgccgcctcctccccggcagcggccgcgcgaggagcccgaggcgga 273 |||||||||| ||||| || || || | || ||||||| | || |||||||||||||| Sbjct: 129 gatcttcgcggggccgcccccgccgccgccgccgcggccgagggacgagcccgaggcgga 188 Query: 274 gccgctcccgccgcccgtgcagctgggcgaggtcgatgaggaggagctccgccagtacga 333 |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 189 gccgctcccgccgcccgtgcagctcggggaggtctccgaggaggagctccgccagtacga 248 Query: 334 cgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgacgtcac 393 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 cgggtccgatcccaagaagcccctcctcatggccatcaagggccagatctatgacgtcac 308 Query: 394 gcagagcagaatgttctatggacctggtggaccttatgccctattcgctgacaaagacgc 453 ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| || Sbjct: 309 gcagagcaggatgttctatggacctggtggaccttatgcgctattcgctggcaaagatgc 368 Query: 454 cagcagagctctagccaagatgtctttcgagccccagga 492 ||||||||| || || |||||||| |||||||||||||| Sbjct: 369 cagcagagcactcgctaagatgtccttcgagccccagga 407
>dbj|AK105774.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F02, full insert sequence Length = 985 Score = 478 bits (241), Expect = e-131 Identities = 360/399 (90%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 97 ggcggtggcggagctctgggagacgctgaagcaggcgatcttagcgtacacggggctgtc 156 ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 87 ggcggtggcggagctgtgggagacgctgaagcaggcgatcgtggcgtacacggggctgtc 146 Query: 157 cccgacggccttcttcaccgccgtggcagtcgccgccgcgctgtaccacgtcgtctcggg 216 ||| |||| ||||||||||||||||| | || || ||||||||||||||||| ||||| Sbjct: 147 gccggcggcgttcttcaccgccgtggcggcggcggcggcgctgtaccacgtcgtgtcggg 206 Query: 217 gatcttcgcg---ccgccgcctcctccccggcagcggccgcgcgaggagcccgaggcgga 273 |||||||||| ||||| || || || | || ||||||| | || |||||||||||||| Sbjct: 207 gatcttcgcggggccgcccccgccgccgccgccgcggccgagggacgagcccgaggcgga 266 Query: 274 gccgctcccgccgcccgtgcagctgggcgaggtcgatgaggaggagctccgccagtacga 333 |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 267 gccgctcccgccgcccgtgcagctcggggaggtctccgaggaggagctccgccagtacga 326 Query: 334 cgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgacgtcac 393 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 cgggtccgatcccaagaagcccctcctcatggccatcaagggccagatctatgacgtcac 386 Query: 394 gcagagcagaatgttctatggacctggtggaccttatgccctattcgctgacaaagacgc 453 ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| || Sbjct: 387 gcagagcaggatgttctatggacctggtggaccttatgcgctattcgctggcaaagatgc 446 Query: 454 cagcagagctctagccaagatgtctttcgagccccagga 492 ||||||||| || || |||||||| |||||||||||||| Sbjct: 447 cagcagagcactcgctaagatgtccttcgagccccagga 485
>dbj|AK069511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P08, full insert sequence Length = 1030 Score = 478 bits (241), Expect = e-131 Identities = 360/399 (90%), Gaps = 3/399 (0%) Strand = Plus / Plus Query: 97 ggcggtggcggagctctgggagacgctgaagcaggcgatcttagcgtacacggggctgtc 156 ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 132 ggcggtggcggagctgtgggagacgctgaagcaggcgatcgtggcgtacacggggctgtc 191 Query: 157 cccgacggccttcttcaccgccgtggcagtcgccgccgcgctgtaccacgtcgtctcggg 216 ||| |||| ||||||||||||||||| | || || ||||||||||||||||| ||||| Sbjct: 192 gccggcggcgttcttcaccgccgtggcggcggcggcggcgctgtaccacgtcgtgtcggg 251 Query: 217 gatcttcgcg---ccgccgcctcctccccggcagcggccgcgcgaggagcccgaggcgga 273 |||||||||| ||||| || || || | || ||||||| | || |||||||||||||| Sbjct: 252 gatcttcgcggggccgcccccgccgccgccgccgcggccgagggacgagcccgaggcgga 311 Query: 274 gccgctcccgccgcccgtgcagctgggcgaggtcgatgaggaggagctccgccagtacga 333 |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 312 gccgctcccgccgcccgtgcagctcggggaggtctccgaggaggagctccgccagtacga 371 Query: 334 cgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgacgtcac 393 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 cgggtccgatcccaagaagcccctcctcatggccatcaagggccagatctatgacgtcac 431 Query: 394 gcagagcagaatgttctatggacctggtggaccttatgccctattcgctgacaaagacgc 453 ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| || Sbjct: 432 gcagagcaggatgttctatggacctggtggaccttatgcgctattcgctggcaaagatgc 491 Query: 454 cagcagagctctagccaagatgtctttcgagccccagga 492 ||||||||| || || |||||||| |||||||||||||| Sbjct: 492 cagcagagcactcgctaagatgtccttcgagccccagga 530
>gb|AY106431.1| Zea mays PCO116332 mRNA sequence Length = 1139 Score = 430 bits (217), Expect = e-117 Identities = 391/449 (87%) Strand = Plus / Plus Query: 89 gcagcgatggcggtggcggagctctgggagacgctgaagcaggcgatcttagcgtacacg 148 ||||||||||||||||||||||| |||||||| ||||||||| ||||| | || |||||| Sbjct: 69 gcagcgatggcggtggcggagctgtgggagacactgaagcagtcgatcgttgcatacacg 128 Query: 149 gggctgtccccgacggccttcttcaccgccgtggcagtcgccgccgcgctgtaccacgtc 208 |||||||| ||| ||||||| ||||| |||||||| || || ||||| |||||||| ||| Sbjct: 129 gggctgtcgccggcggcctttttcacggccgtggcggtggcggccgctctgtaccatgtc 188 Query: 209 gtctcggggatcttcgcgccgccgcctcctccccggcagcggccgcgcgaggagcccgag 268 || |||||| ||||||| | ||||| || || | || ||| ||||| |||||||||||| Sbjct: 189 gtgtcggggctcttcgcagccccgcccccgccgccgccgcgcccgcgggaggagcccgag 248 Query: 269 gcggagccgctcccgccgcccgtgcagctgggcgaggtcgatgaggaggagctccgccag 328 ||||||||||||||||| ||||||||| |||| |||||| |||||||| ||||||||| Sbjct: 249 gcggagccgctcccgccccccgtgcagatgggggaggtctccgaggaggacctccgccag 308 Query: 329 tacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgac 388 |||||||| |||||||| ||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 309 tacgacggctccgaccctaagaagccgctcctcatggccatcaagggccagatctacgac 368 Query: 389 gtcacgcagagcagaatgttctatggacctggtggaccttatgccctattcgctgacaaa 448 ||||| |||||||||||||||||||||||||| |||||||| ||||| ||||| | |||| Sbjct: 369 gtcacccagagcagaatgttctatggacctggcggaccttacgccctgttcgccggcaaa 428 Query: 449 gacgccagcagagctctagccaagatgtctttcgagccccaggacctgaacggtgatact 508 || ||||||||||||||||| |||||||| |||||||| |||||||| | ||| || | Sbjct: 429 gatgccagcagagctctagcgaagatgtcgttcgagccacaggacctcaccggcgacatc 488 Query: 509 tcgggccttgggccgttcgagctcgacgc 537 |||||||| || ||||| ||||||||||| Sbjct: 489 tcgggcctaggtccgtttgagctcgacgc 517
>gb|BT009156.1| Triticum aestivum clone wl1n.pk0068.d3:fis, full insert mRNA sequence Length = 1125 Score = 422 bits (213), Expect = e-115 Identities = 360/409 (88%) Strand = Plus / Plus Query: 89 gcagcgatggcggtggcggagctctgggagacgctgaagcaggcgatcttagcgtacacg 148 ||||||||||||||||||||||| |||||||| ||||||||| ||||| | || |||||| Sbjct: 135 gcagcgatggcggtggcggagctgtgggagacactgaagcagtcgatcgttgcatacacg 194 Query: 149 gggctgtccccgacggccttcttcaccgccgtggcagtcgccgccgcgctgtaccacgtc 208 |||||||| ||| ||||||| ||||| |||||||| || || ||||| |||||||| ||| Sbjct: 195 gggctgtcgccggcggcctttttcacggccgtggcggtggcggccgctctgtaccatgtc 254 Query: 209 gtctcggggatcttcgcgccgccgcctcctccccggcagcggccgcgcgaggagcccgag 268 || |||||| ||||||| | ||||| || || | || ||| ||||| |||||||||||| Sbjct: 255 gtgtcggggctcttcgcagccccgcccccgccgccgccgcgcccgcgggaggagcccgag 314 Query: 269 gcggagccgctcccgccgcccgtgcagctgggcgaggtcgatgaggaggagctccgccag 328 ||||||||||||||||| ||||||||| |||| |||||| |||||||||||| ||||| Sbjct: 315 gcggagccgctcccgccccccgtgcagatgggggaggtctcagaggaggagctcagccag 374 Query: 329 tacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgac 388 |||||||| |||||||| ||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 375 tacgacggctccgaccctaagaagccgctcctcatggccatcaagggccagatctacgac 434 Query: 389 gtcacgcagagcagaatgttctatggacctggtggaccttatgccctattcgctgacaaa 448 ||||| |||||||||||||||||||||||||||||||| || ||||||||||| | |||| Sbjct: 435 gtcacccagagcagaatgttctatggacctggtggaccatacgccctattcgccggcaaa 494 Query: 449 gacgccagcagagctctagccaagatgtctttcgagccccaggacctga 497 |||||||||||||| ||||| |||||||| |||||||| ||||| |||| Sbjct: 495 gacgccagcagagccctagcgaagatgtccttcgagccacaggatctga 543
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 363 bits (183), Expect = 4e-97 Identities = 278/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 97 ggcggtggcggagctctgggagacgctgaagcaggcgatcttagcgtacacggggctgtc 156 ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 18421 ggcggtggcggagctgtgggagacgctgaagcaggcgatcgtggcgtacacggggctgtc 18362 Query: 157 cccgacggccttcttcaccgccgtggcagtcgccgccgcgctgtaccacgtcgtctcggg 216 ||| |||| ||||||||||||||||| | || || ||||||||||||||||| ||||| Sbjct: 18361 gccggcggcgttcttcaccgccgtggcggcggcggcggcgctgtaccacgtcgtgtcggg 18302 Query: 217 gatcttcgcg---ccgccgcctcctccccggcagcggccgcgcgaggagcccgaggcgga 273 |||||||||| ||||| || || || | || ||||||| | || |||||||||||||| Sbjct: 18301 gatcttcgcggggccgcccccgccgccgccgccgcggccgagggacgagcccgaggcgga 18242 Query: 274 gccgctcccgccgcccgtgcagctgggcgaggtcgatgaggaggagctccgccagtacga 333 |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 18241 gccgctcccgccgcccgtgcagctcggggaggtctccgaggaggagctccgccagtacga 18182 Query: 334 cgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgacgtcac 393 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 18181 cgggtccgatcccaagaagcccctcctcatggccatcaagggccagatctatgacgtcac 18122 Query: 394 gcagagcag 402 ||||||||| Sbjct: 18121 gcagagcag 18113 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 399 gcagaatgttctatggacctggtggaccttatgccctattcgctgacaaagacgccagca 458 |||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| Sbjct: 16849 gcaggatgttctatggacctggtggaccttatgcgctattcgctggcaaagatgccagca 16790 Query: 459 gagctctagccaagatgtctttcgagccccagga 492 |||| || || |||||||| |||||||||||||| Sbjct: 16789 gagcactcgctaagatgtccttcgagccccagga 16756 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 326 cagtacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctat 385 ||||||||||||||||||||| |||| || | |||||||| |||||||| ||||||||| Sbjct: 12800 cagtacgacgggtccgaccccgagaagccgttgctcatggcgatcaaggggcagatctat 12741 Query: 386 gacgtcacgcagagcag 402 |||||| | |||||||| Sbjct: 12740 gacgtctcccagagcag 12724 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 399 gcagaatgttctatggacctggtggaccttatgc 432 ||||| |||||||||||||||||||||| ||||| Sbjct: 11515 gcagattgttctatggacctggtggaccatatgc 11482
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 363 bits (183), Expect = 4e-97 Identities = 278/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 97 ggcggtggcggagctctgggagacgctgaagcaggcgatcttagcgtacacggggctgtc 156 ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 18657143 ggcggtggcggagctgtgggagacgctgaagcaggcgatcgtggcgtacacggggctgtc 18657084 Query: 157 cccgacggccttcttcaccgccgtggcagtcgccgccgcgctgtaccacgtcgtctcggg 216 ||| |||| ||||||||||||||||| | || || ||||||||||||||||| ||||| Sbjct: 18657083 gccggcggcgttcttcaccgccgtggcggcggcggcggcgctgtaccacgtcgtgtcggg 18657024 Query: 217 gatcttcgcg---ccgccgcctcctccccggcagcggccgcgcgaggagcccgaggcgga 273 |||||||||| ||||| || || || | || ||||||| | || |||||||||||||| Sbjct: 18657023 gatcttcgcggggccgcccccgccgccgccgccgcggccgagggacgagcccgaggcgga 18656964 Query: 274 gccgctcccgccgcccgtgcagctgggcgaggtcgatgaggaggagctccgccagtacga 333 |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 18656963 gccgctcccgccgcccgtgcagctcggggaggtctccgaggaggagctccgccagtacga 18656904 Query: 334 cgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgacgtcac 393 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 18656903 cgggtccgatcccaagaagcccctcctcatggccatcaagggccagatctatgacgtcac 18656844 Query: 394 gcagagcag 402 ||||||||| Sbjct: 18656843 gcagagcag 18656835 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 399 gcagaatgttctatggacctggtggaccttatgccctattcgctgacaaagacgccagca 458 |||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| Sbjct: 18655571 gcaggatgttctatggacctggtggaccttatgcgctattcgctggcaaagatgccagca 18655512 Query: 459 gagctctagccaagatgtctttcgagccccagga 492 |||| || || |||||||| |||||||||||||| Sbjct: 18655511 gagcactcgctaagatgtccttcgagccccagga 18655478 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 326 cagtacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctat 385 ||||||||||||||||||||| |||| || | |||||||| |||||||| ||||||||| Sbjct: 18651522 cagtacgacgggtccgaccccgagaagccgttgctcatggcgatcaaggggcagatctat 18651463 Query: 386 gacgtcacgcagagcag 402 |||||| | |||||||| Sbjct: 18651462 gacgtctcccagagcag 18651446 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 399 gcagaatgttctatggacctggtggaccttatgc 432 ||||| |||||||||||||||||||||| ||||| Sbjct: 18650237 gcagattgttctatggacctggtggaccatatgc 18650204
>dbj|AK072008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099K01, full insert sequence Length = 2077 Score = 363 bits (183), Expect = 4e-97 Identities = 278/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 97 ggcggtggcggagctctgggagacgctgaagcaggcgatcttagcgtacacggggctgtc 156 ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 132 ggcggtggcggagctgtgggagacgctgaagcaggcgatcgtggcgtacacggggctgtc 191 Query: 157 cccgacggccttcttcaccgccgtggcagtcgccgccgcgctgtaccacgtcgtctcggg 216 ||| |||| ||||||||||||||||| | || || ||||||||||||||||| ||||| Sbjct: 192 gccggcggcgttcttcaccgccgtggcggcggcggcggcgctgtaccacgtcgtgtcggg 251 Query: 217 gatcttcgcg---ccgccgcctcctccccggcagcggccgcgcgaggagcccgaggcgga 273 |||||||||| ||||| || || || | || ||||||| | || |||||||||||||| Sbjct: 252 gatcttcgcggggccgcccccgccgccgccgccgcggccgagggacgagcccgaggcgga 311 Query: 274 gccgctcccgccgcccgtgcagctgggcgaggtcgatgaggaggagctccgccagtacga 333 |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 312 gccgctcccgccgcccgtgcagctcggggaggtctccgaggaggagctccgccagtacga 371 Query: 334 cgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgacgtcac 393 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 cgggtccgatcccaagaagcccctcctcatggccatcaagggccagatctatgacgtcac 431 Query: 394 gcagagcag 402 ||||||||| Sbjct: 432 gcagagcag 440 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 399 gcagaatgttctatggacctggtggaccttatgccctattcgctgacaaagacgccagca 458 |||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| Sbjct: 1704 gcaggatgttctatggacctggtggaccttatgcgctattcgctggcaaagatgccagca 1763 Query: 459 gagctctagccaagatgtctttcgagccccagga 492 |||| || || |||||||| |||||||||||||| Sbjct: 1764 gagcactcgctaagatgtccttcgagccccagga 1797
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 363 bits (183), Expect = 4e-97 Identities = 278/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 97 ggcggtggcggagctctgggagacgctgaagcaggcgatcttagcgtacacggggctgtc 156 ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 18667996 ggcggtggcggagctgtgggagacgctgaagcaggcgatcgtggcgtacacggggctgtc 18667937 Query: 157 cccgacggccttcttcaccgccgtggcagtcgccgccgcgctgtaccacgtcgtctcggg 216 ||| |||| ||||||||||||||||| | || || ||||||||||||||||| ||||| Sbjct: 18667936 gccggcggcgttcttcaccgccgtggcggcggcggcggcgctgtaccacgtcgtgtcggg 18667877 Query: 217 gatcttcgcg---ccgccgcctcctccccggcagcggccgcgcgaggagcccgaggcgga 273 |||||||||| ||||| || || || | || ||||||| | || |||||||||||||| Sbjct: 18667876 gatcttcgcggggccgcccccgccgccgccgccgcggccgagggacgagcccgaggcgga 18667817 Query: 274 gccgctcccgccgcccgtgcagctgggcgaggtcgatgaggaggagctccgccagtacga 333 |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| Sbjct: 18667816 gccgctcccgccgcccgtgcagctcggggaggtctccgaggaggagctccgccagtacga 18667757 Query: 334 cgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgacgtcac 393 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 18667756 cgggtccgatcccaagaagcccctcctcatggccatcaagggccagatctatgacgtcac 18667697 Query: 394 gcagagcag 402 ||||||||| Sbjct: 18667696 gcagagcag 18667688 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 399 gcagaatgttctatggacctggtggaccttatgccctattcgctgacaaagacgccagca 458 |||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| Sbjct: 18666424 gcaggatgttctatggacctggtggaccttatgcgctattcgctggcaaagatgccagca 18666365 Query: 459 gagctctagccaagatgtctttcgagccccagga 492 |||| || || |||||||| |||||||||||||| Sbjct: 18666364 gagcactcgctaagatgtccttcgagccccagga 18666331 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 326 cagtacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctat 385 ||||||||||||||||||||| |||| || | |||||||| |||||||| ||||||||| Sbjct: 18662375 cagtacgacgggtccgaccccgagaagccgttgctcatggcgatcaaggggcagatctat 18662316 Query: 386 gacgtcacgcagagcag 402 |||||| | |||||||| Sbjct: 18662315 gacgtctcccagagcag 18662299 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 399 gcagaatgttctatggacctggtggaccttatgc 432 ||||| |||||||||||||||||||||| ||||| Sbjct: 18661090 gcagattgttctatggacctggtggaccatatgc 18661057
>gb|AY104410.1| Zea mays PCO116331 mRNA sequence Length = 790 Score = 212 bits (107), Expect = 9e-52 Identities = 152/167 (91%) Strand = Plus / Plus Query: 331 cgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgacgt 390 |||||| |||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 8 cgacggctccgaccctaagaagccgctcctcatggccatcaagggccagatctacgacgt 67 Query: 391 cacgcagagcagaatgttctatggacctggtggaccttatgccctattcgctgacaaaga 450 ||| |||||||||||||||||||||||||||||||| || ||||||||||| | |||||| Sbjct: 68 cacccagagcagaatgttctatggacctggtggaccatacgccctattcgccggcaaaga 127 Query: 451 cgccagcagagctctagccaagatgtctttcgagccccaggacctga 497 |||||||||||| ||||| |||||||| |||||||| ||||| |||| Sbjct: 128 cgccagcagagccctagcgaagatgtccttcgagccacaggatctga 174
>ref|XM_466976.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1309 Score = 125 bits (63), Expect = 2e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 329 tacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgac 388 |||||||||||||||||||| || || || |||||||||||||||||||| ||||| || Sbjct: 344 tacgacgggtccgaccccaacaagccgctgctcatggccatcaagggccaaatctacgat 403 Query: 389 gtcacgcagagcagaatgttctatggacctggtgg 423 |||||||||||||| |||||||||||||||||||| Sbjct: 404 gtcacgcagagcaggatgttctatggacctggtgg 438 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 140 gcgtacacggggctgtccccgacggccttcttcaccgccgtggcagtcgccgccgcgctg 199 ||||||||||||||||| || |||| |||||||| |||||||| || |||||||||||| Sbjct: 152 gcgtacacggggctgtctcccgcggcgttcttcacggccgtggcggtggccgccgcgctg 211 Query: 200 tac 202 ||| Sbjct: 212 tac 214
>ref|NM_197217.1| Oryza sativa (japonica cultivar-group) putative steroid membrane binding protein (OSJNBb0073N24.2), mRNA Length = 830 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 326 cagtacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctat 385 ||||||||||||||||||||| |||| || | |||||||| |||||||| ||||||||| Sbjct: 414 cagtacgacgggtccgaccccgagaagccgttgctcatggcgatcaaggggcagatctat 473 Query: 386 gacgtcacgcagagcagaatgttctatggacctggtggaccttatgc 432 |||||| | ||||||||| |||||||||||||||||||||| ||||| Sbjct: 474 gacgtctcccagagcagattgttctatggacctggtggaccatatgc 520
>dbj|AK098881.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F13, full insert sequence Length = 1019 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 326 cagtacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctat 385 ||||||||||||||||||||| |||| || | |||||||| |||||||| ||||||||| Sbjct: 407 cagtacgacgggtccgaccccgagaagccgttgctcatggcgatcaaggggcagatctat 466 Query: 386 gacgtcacgcagagcagaatgttctatggacctggtggaccttatgc 432 |||||| | ||||||||| |||||||||||||||||||||| ||||| Sbjct: 467 gacgtctcccagagcagattgttctatggacctggtggaccatatgc 513
>dbj|AK069079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006E15, full insert sequence Length = 1307 Score = 125 bits (63), Expect = 2e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 329 tacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgac 388 |||||||||||||||||||| || || || |||||||||||||||||||| ||||| || Sbjct: 342 tacgacgggtccgaccccaacaagccgctgctcatggccatcaagggccaaatctacgat 401 Query: 389 gtcacgcagagcagaatgttctatggacctggtgg 423 |||||||||||||| |||||||||||||||||||| Sbjct: 402 gtcacgcagagcaggatgttctatggacctggtgg 436 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 140 gcgtacacggggctgtccccgacggccttcttcaccgccgtggcagtcgccgccgcgctg 199 ||||||||||||||||| || |||| |||||||| |||||||| || |||||||||||| Sbjct: 150 gcgtacacggggctgtctcccgcggcgttcttcacggccgtggcggtggccgccgcgctg 209 Query: 200 tac 202 ||| Sbjct: 210 tac 212
>dbj|AK061824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C02, full insert sequence Length = 1174 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 326 cagtacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctat 385 ||||||||||||||||||||| |||| || | |||||||| |||||||| ||||||||| Sbjct: 406 cagtacgacgggtccgaccccgagaagccgttgctcatggcgatcaaggggcagatctat 465 Query: 386 gacgtcacgcagagcagaatgttctatggacctggtggaccttatgc 432 |||||| | ||||||||| |||||||||||||||||||||| ||||| Sbjct: 466 gacgtctcccagagcagattgttctatggacctggtggaccatatgc 512
>dbj|AK060167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D12, full insert sequence Length = 1041 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 326 cagtacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctat 385 ||||||||||||||||||||| |||| || | |||||||| |||||||| ||||||||| Sbjct: 406 cagtacgacgggtccgaccccgagaagccgttgctcatggcgatcaaggggcagatctat 465 Query: 386 gacgtcacgcagagcagaatgttctatggacctggtggaccttatgc 432 |||||| | ||||||||| |||||||||||||||||||||| ||||| Sbjct: 466 gacgtctcccagagcagattgttctatggacctggtggaccatatgc 512
>gb|AY104693.1| Zea mays PCO099229 mRNA sequence Length = 1421 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 311 gaggaggagctccgccagtacgacgggtccgaccccaagaaacccctcctcatggccatc 370 |||||||| || || ||||||||||||||||||||| ||||||| || || ||||||||| Sbjct: 716 gaggaggaactacggcagtacgacgggtccgaccccgagaaaccgctgctgatggccatc 775 Query: 371 aagggccagatctatgacgtcacgcagagcagaatgttctatggacctgg 420 ||||| ||||||||||||||| | ||||||| ||||||||||||||||| Sbjct: 776 aaggggcagatctatgacgtctcagagagcaggatgttctatggacctgg 825
>dbj|AK121442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O15, full insert sequence Length = 1064 Score = 117 bits (59), Expect = 4e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 326 cagtacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctat 385 ||||||||||||||||||||| ||| || | |||||||| |||||||| ||||||||| Sbjct: 407 cagtacgacgggtccgaccccgggaagccgttgctcatggcgatcaaggggcagatctat 466 Query: 386 gacgtcacgcagagcagaatgttctatggacctggtggaccttatgc 432 |||||| | ||||||||| |||||||||||||||||||||| ||||| Sbjct: 467 gacgtctcccagagcagattgttctatggacctggtggaccatatgc 513
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 329 tacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgac 388 |||||||||||||||||||| || || || |||||||||||||||||||| ||||| || Sbjct: 25716554 tacgacgggtccgaccccaacaagccgctgctcatggccatcaagggccaaatctacgat 25716495 Query: 389 gtcacgcagagcag 402 |||||||||||||| Sbjct: 25716494 gtcacgcagagcag 25716481 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 140 gcgtacacggggctgtccccgacggccttcttcaccgccgtggcagtcgccgccgcgctg 199 ||||||||||||||||| || |||| |||||||| |||||||| || |||||||||||| Sbjct: 25716746 gcgtacacggggctgtctcccgcggcgttcttcacggccgtggcggtggccgccgcgctg 25716687 Query: 200 tac 202 ||| Sbjct: 25716686 tac 25716684 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 219 tcttcgcgccgccgcctcctcc 240 |||||||||||||||||||||| Sbjct: 3158698 tcttcgcgccgccgcctcctcc 3158719 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 gcagaatgttctatggacctggtgg 423 |||| |||||||||||||||||||| Sbjct: 25716337 gcaggatgttctatggacctggtgg 25716313 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cgccgccgcgctgtaccacg 206 |||||||||||||||||||| Sbjct: 2824804 cgccgccgcgctgtaccacg 2824823
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 329 tacgacgggtccgaccccaagaaacccctcctcatggccatcaagggccagatctatgac 388 |||||||||||||||||||| || || || |||||||||||||||||||| ||||| || Sbjct: 119230 tacgacgggtccgaccccaacaagccgctgctcatggccatcaagggccaaatctacgat 119171 Query: 389 gtcacgcagagcag 402 |||||||||||||| Sbjct: 119170 gtcacgcagagcag 119157 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 140 gcgtacacggggctgtccccgacggccttcttcaccgccgtggcagtcgccgccgcgctg 199 ||||||||||||||||| || |||| |||||||| |||||||| || |||||||||||| Sbjct: 119422 gcgtacacggggctgtctcccgcggcgttcttcacggccgtggcggtggccgccgcgctg 119363 Query: 200 tac 202 ||| Sbjct: 119362 tac 119360 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 gcagaatgttctatggacctggtgg 423 |||| |||||||||||||||||||| Sbjct: 119013 gcaggatgttctatggacctggtgg 118989
>gb|BT013419.1| Lycopersicon esculentum clone 132057F, mRNA sequence Length = 1087 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 362 atggccatcaagggccagatctatgacgtcacgcagagcagaatgttctatggacctggt 421 ||||| || ||||| ||||||||||| || | |||||||||||||| ||||||||||| Sbjct: 356 atggctattaagggtcagatctatgatgtttctcagagcagaatgttttatggacctggg 415 Query: 422 ggaccttatgc 432 ||||||||||| Sbjct: 416 ggaccttatgc 426
>ref|NM_114748.2| Arabidopsis thaliana ATMP2 AT3G48890 (ATMP2) mRNA, complete cds Length = 990 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 353 cccctcctcatggccatcaagggccagatctatgacgtcacgcagagcagaatgttctat 412 ||||| || ||||| |||||||||||||||||||| || | |||||||| ||||| ||| Sbjct: 327 ccccttcttatggcgatcaagggccagatctatgatgtttctcagagcaggatgttttat 386 Query: 413 ggacctggtggaccttatgccctattcgctgacaaagacgccagcagagctctagccaag 472 ||||| ||||| || ||||| || || || | ||||| || ||| ||||||| || ||| Sbjct: 387 ggaccaggtgggccatatgctctgtttgcagggaaagatgcaagccgagctctggcaaag 446 Query: 473 atgtc 477 ||||| Sbjct: 447 atgtc 451
>gb|AY079104.1| Arabidopsis thaliana AT3g48890/T21J18_160 mRNA, complete cds Length = 702 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 353 cccctcctcatggccatcaagggccagatctatgacgtcacgcagagcagaatgttctat 412 ||||| || ||||| |||||||||||||||||||| || | |||||||| ||||| ||| Sbjct: 259 ccccttcttatggcgatcaagggccagatctatgatgtttctcagagcaggatgttttat 318 Query: 413 ggacctggtggaccttatgccctattcgctgacaaagacgccagcagagctctagccaag 472 ||||| ||||| || ||||| || || || | ||||| || ||| ||||||| || ||| Sbjct: 319 ggaccaggtgggccatatgctctgtttgcagggaaagatgcaagccgagctctggcaaag 378 Query: 473 atgtc 477 ||||| Sbjct: 379 atgtc 383
>gb|AF419567.1|AF419567 Arabidopsis thaliana AT3g48890/T21J18_160 mRNA, complete cds Length = 945 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 353 cccctcctcatggccatcaagggccagatctatgacgtcacgcagagcagaatgttctat 412 ||||| || ||||| |||||||||||||||||||| || | |||||||| ||||| ||| Sbjct: 327 ccccttcttatggcgatcaagggccagatctatgatgtttctcagagcaggatgttttat 386 Query: 413 ggacctggtggaccttatgccctattcgctgacaaagacgccagcagagctctagccaag 472 ||||| ||||| || ||||| || || || | ||||| || ||| ||||||| || ||| Sbjct: 387 ggaccaggtgggccatatgctctgtttgcagggaaagatgcaagccgagctctggcaaag 446 Query: 473 atgtc 477 ||||| Sbjct: 447 atgtc 451
>emb|BX824682.1|CNS0A7KU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 912 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 353 cccctcctcatggccatcaagggccagatctatgacgtcacgcagagcagaatgttctat 412 ||||| || ||||| |||||||||||||||||||| || | |||||||| ||||| ||| Sbjct: 309 ccccttcttatggcgatcaagggccagatctatgatgtttctcagagcaggatgttttat 368 Query: 413 ggacctggtggaccttatgccctattcgctgacaaagacgccagcagagctctagccaag 472 ||||| ||||| || ||||| || || || | ||||| || ||| ||||||| || ||| Sbjct: 369 ggaccaggtgggccatatgctctgtttgcagggaaagatgcaagccgagctctggcaaag 428 Query: 473 atgtc 477 ||||| Sbjct: 429 atgtc 433
>gb|AF153283.1|AF153283 Arabidopsis thaliana putative progesterone-binding protein homolog (Atmp2) mRNA, complete cds Length = 930 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 353 cccctcctcatggccatcaagggccagatctatgacgtcacgcagagcagaatgttctat 412 ||||| || ||||| |||||||||||||||||||| || | |||||||| ||||| ||| Sbjct: 270 ccccttcttatggcgatcaagggccagatctatgatgtttctcagagcaggatgttttat 329 Query: 413 ggacctggtggaccttatgccctattcgctgacaaagacgccagcagagctctagccaag 472 ||||| ||||| || ||||| || || || | ||||| || ||| ||||||| || ||| Sbjct: 330 ggaccaggtgggccatatgctctgtttgcagggaaagatgcaagccgagctctggcaaag 389 Query: 473 atgtc 477 ||||| Sbjct: 390 atgtc 394
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 353 cccctcctcatggccatcaagggccagatctatga 387 ||||| || ||||| |||||||||||||||||||| Sbjct: 78366 ccccttcttatggcgatcaagggccagatctatga 78400
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 334 cgggtccgaccccaagaaacccc 356 ||||||||||||||||||||||| Sbjct: 377043 cgggtccgaccccaagaaacccc 377065
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 255 gcgaggagcccgaggcggagccg 277 ||||||||||||||||||||||| Sbjct: 1833707 gcgaggagcccgaggcggagccg 1833729
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 255 gcgaggagcccgaggcggagccg 277 ||||||||||||||||||||||| Sbjct: 75089 gcgaggagcccgaggcggagccg 75111
>dbj|AK109801.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-F06, full insert sequence Length = 2092 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 255 gcgaggagcccgaggcggagccg 277 ||||||||||||||||||||||| Sbjct: 596 gcgaggagcccgaggcggagccg 618
>dbj|AK108760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G05, full insert sequence Length = 2076 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 255 gcgaggagcccgaggcggagccg 277 ||||||||||||||||||||||| Sbjct: 600 gcgaggagcccgaggcggagccg 622
>dbj|AB244282.1| Oryza sativa (japonica cultivar-group) OML7 mRNA for MEI2-like RNA binding protein, complete cds Length = 1170 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 219 tcttcgcgccgccgcctcctcc 240 |||||||||||||||||||||| Sbjct: 62 tcttcgcgccgccgcctcctcc 83
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 219 tcttcgcgccgccgcctcctcc 240 |||||||||||||||||||||| Sbjct: 86852 tcttcgcgccgccgcctcctcc 86873
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 219 tcttcgcgccgccgcctcctcc 240 |||||||||||||||||||||| Sbjct: 30885 tcttcgcgccgccgcctcctcc 30906
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 174 ccgccgtggcagtcgccgccgcgctg 199 |||||||||| ||||||||||||||| Sbjct: 1229918 ccgccgtggcggtcgccgccgcgctg 1229943
>ref|NM_124603.2| Arabidopsis thaliana MSBP1 AT5G52240 (MSBP1) mRNA, complete cds Length = 906 Score = 42.1 bits (21), Expect = 1.9 Identities = 81/101 (80%) Strand = Plus / Plus Query: 377 cagatctatgacgtcacgcagagcagaatgttctatggacctggtggaccttatgcccta 436 ||||||||||| || || || ||||| |||||||| ||||| || ||||| ||||| | Sbjct: 356 cagatctatgatgttacacaaagcaggatgttctacggaccaggaggaccatatgctttg 415 Query: 437 ttcgctgacaaagacgccagcagagctctagccaagatgtc 477 || || | |||||||| ||| ||||||| || |||||||| Sbjct: 416 tttgcagggaaagacgctagccgagctcttgcaaagatgtc 456
>gb|BT000922.1| Arabidopsis thaliana clone C105100 putative progesterone-binding protein (At5g52240) mRNA, complete cds Length = 694 Score = 42.1 bits (21), Expect = 1.9 Identities = 81/101 (80%) Strand = Plus / Plus Query: 377 cagatctatgacgtcacgcagagcagaatgttctatggacctggtggaccttatgcccta 436 ||||||||||| || || || ||||| |||||||| ||||| || ||||| ||||| | Sbjct: 295 cagatctatgatgttacacaaagcaggatgttctacggaccaggaggaccatatgctttg 354 Query: 437 ttcgctgacaaagacgccagcagagctctagccaagatgtc 477 || || | |||||||| ||| ||||||| || |||||||| Sbjct: 355 tttgcagggaaagacgctagccgagctcttgcaaagatgtc 395
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 cggccttcttcaccgccgtgg 182 ||||||||||||||||||||| Sbjct: 349460 cggccttcttcaccgccgtgg 349480
>gb|AY112666.1| Gallus gallus quiescin/sulfhydryl oxidase mRNA, complete cds Length = 2232 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 cgccgccgcctcctccccggc 245 ||||||||||||||||||||| Sbjct: 1701 cgccgccgcctcctccccggc 1681
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gctgggcgaggtcgatgagga 315 ||||||||||||||||||||| Sbjct: 3500699 gctgggcgaggtcgatgagga 3500719
>gb|AC153923.4| Mus musculus 6 BAC RP23-82I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 248275 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cgcgccgccgcctcctccccg 243 ||||||||||||||||||||| Sbjct: 201112 cgcgccgccgcctcctccccg 201132
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 tcgcgccgccgcctcctcccc 242 ||||||||||||||||||||| Sbjct: 25119813 tcgcgccgccgcctcctcccc 25119793 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cgcgccgccgcctcctcccc 242 |||||||||||||||||||| Sbjct: 709320 cgcgccgccgcctcctcccc 709339
>emb|BX829533.1|CNS0A08R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 841 Score = 42.1 bits (21), Expect = 1.9 Identities = 81/101 (80%) Strand = Plus / Plus Query: 377 cagatctatgacgtcacgcagagcagaatgttctatggacctggtggaccttatgcccta 436 ||||||||||| || || || ||||| |||||||| ||||| || ||||| ||||| | Sbjct: 317 cagatctatgatgttacacaaagcaggatgttctacggaccaggaggaccatatgctttg 376 Query: 437 ttcgctgacaaagacgccagcagagctctagccaagatgtc 477 || || | |||||||| ||| ||||||| || |||||||| Sbjct: 377 tttgcagggaaagacgctagccgagctcttgcaaagatgtc 417
>emb|BX832321.1|CNS09ZQE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 869 Score = 42.1 bits (21), Expect = 1.9 Identities = 81/101 (80%) Strand = Plus / Plus Query: 377 cagatctatgacgtcacgcagagcagaatgttctatggacctggtggaccttatgcccta 436 ||||||||||| || || || ||||| |||||||| ||||| || ||||| ||||| | Sbjct: 342 cagatctatgatgttacacaaagcaggatgttctacggaccaggaggaccatatgctttg 401 Query: 437 ttcgctgacaaagacgccagcagagctctagccaagatgtc 477 || || | |||||||| ||| ||||||| || |||||||| Sbjct: 402 tttgcagggaaagacgctagccgagctcttgcaaagatgtc 442
>ref|NM_204125.1| Gallus gallus quiescin Q6 (QSCN6), mRNA Length = 2232 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 cgccgccgcctcctccccggc 245 ||||||||||||||||||||| Sbjct: 1701 cgccgccgcctcctccccggc 1681
>gb|AY086811.1| Arabidopsis thaliana clone 28003 mRNA, complete sequence Length = 889 Score = 42.1 bits (21), Expect = 1.9 Identities = 81/101 (80%) Strand = Plus / Plus Query: 377 cagatctatgacgtcacgcagagcagaatgttctatggacctggtggaccttatgcccta 436 ||||||||||| || || || ||||| |||||||| ||||| || ||||| ||||| | Sbjct: 339 cagatctatgatgttacacaaagcaggatgttctacggaccaggaggaccatatgctttg 398 Query: 437 ttcgctgacaaagacgccagcagagctctagccaagatgtc 477 || || | |||||||| ||| ||||||| || |||||||| Sbjct: 399 tttgcagggaaagacgctagccgagctcttgcaaagatgtc 439
>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0064I19 Length = 111644 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 tcgcgccgccgcctcctcccc 242 ||||||||||||||||||||| Sbjct: 23988 tcgcgccgccgcctcctcccc 23968
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 acggccttcttcaccgccgtg 181 ||||||||||||||||||||| Sbjct: 588998 acggccttcttcaccgccgtg 589018
>ref|XM_479758.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cgcgccgccgcctcctcccc 242 |||||||||||||||||||| Sbjct: 25 cgcgccgccgcctcctcccc 44
>ref|NM_001031043.1| Gallus gallus acyl-Coenzyme A binding domain containing 3 (ACBD3), mRNA Length = 3492 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gcgccgccgcctcctccccg 243 |||||||||||||||||||| Sbjct: 234 gcgccgccgcctcctccccg 215
>ref|XM_514323.1| PREDICTED: Pan troglodytes similar to FLJ45717 protein (LOC457878), mRNA Length = 1781 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcgccgccgcctcctccccg 243 |||||||||||||||||||| Sbjct: 1479 gcgccgccgcctcctccccg 1498
>ref|XM_476851.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1367 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cgccgccgcctcctccccgg 244 |||||||||||||||||||| Sbjct: 193 cgccgccgcctcctccccgg 212
>ref|XM_472625.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5022 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gcagcgatggcggtggcggagctc 112 ||||||| |||||||||||||||| Sbjct: 2117 gcagcgacggcggtggcggagctc 2140
>gb|BC076728.1| Xenopus laevis ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:81261 IMAGE:6631362), complete cds Length = 1589 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cctcatccccgagtctcgga 59 |||||||||||||||||||| Sbjct: 128 cctcatccccgagtctcgga 147
>ref|XM_591305.2| PREDICTED: Bos taurus similar to U11/U12 snRNP 48K, transcript variant 1 (LOC513601), mRNA Length = 3558 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgccgccgcctcctccccgg 244 |||||||||||||||||||| Sbjct: 163 cgccgccgcctcctccccgg 144
>ref|XM_865407.1| PREDICTED: Bos taurus similar to U11/U12 snRNP 48K, transcript variant 2 (LOC513601), mRNA Length = 1123 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgccgccgcctcctccccgg 244 |||||||||||||||||||| Sbjct: 163 cgccgccgcctcctccccgg 144
>ref|XM_875934.1| PREDICTED: Bos taurus similar to U11/U12 snRNP 48K, transcript variant 3 (LOC513601), mRNA Length = 1190 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgccgccgcctcctccccgg 244 |||||||||||||||||||| Sbjct: 163 cgccgccgcctcctccccgg 144
>ref|XM_429950.1| PREDICTED: Gallus gallus LOC422356 (LOC422356), mRNA Length = 1876 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggagccgctcccgccgcccg 290 |||||||||||||||||||| Sbjct: 402 ggagccgctcccgccgcccg 383
>ref|XM_429927.1| PREDICTED: Gallus gallus LOC422207 (LOC422207), mRNA Length = 1770 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cggagccgctcccgccgccc 289 |||||||||||||||||||| Sbjct: 187 cggagccgctcccgccgccc 168
>ref|XM_605943.2| PREDICTED: Bos taurus similar to CRK-associated substrate (p130Cas) (Breast cancer anti-estrogen resistance 1 protein) (LOC527550), mRNA Length = 2799 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gccttcttcaccgccgtggc 183 |||||||||||||||||||| Sbjct: 2362 gccttcttcaccgccgtggc 2381
>gb|AY596588.1| Saccharum officinarum clone SCUTLR2030F03, complete sequence Length = 1185 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 atcttcgcgccgccgcctcc 237 |||||||||||||||||||| Sbjct: 999 atcttcgcgccgccgcctcc 980
>gb|AY372817.1| Meleagris gallopavo ryanodine receptor alpha isoform mRNA, partial cds Length = 717 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gccgccgcctcctccccggc 245 |||||||||||||||||||| Sbjct: 407 gccgccgcctcctccccggc 388
>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and 01G10 from library NotreDame1 of Anopheles gambiae (African malaria mosquito) strain PEST Length = 447895 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 cggggctgtccccgacggccttct 170 |||||||||||||| ||||||||| Sbjct: 28649 cggggctgtccccggcggccttct 28626
>ref|XM_745798.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g10020) partial mRNA Length = 786 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cttcgcgccgccgcctcctc 239 |||||||||||||||||||| Sbjct: 36 cttcgcgccgccgcctcctc 55
>gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome 18, complete sequence Length = 215826 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ccccgcccctcatccccgag 52 |||||||||||||||||||| Sbjct: 166887 ccccgcccctcatccccgag 166906
>gb|BC114070.1| Bos taurus similar to CRK-associated substrate (p130Cas) (Breast cancer anti-estrogen resistance 1 protein), mRNA (cDNA clone IMAGE:8170508), partial cds Length = 3108 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gccttcttcaccgccgtggc 183 |||||||||||||||||||| Sbjct: 2338 gccttcttcaccgccgtggc 2357
>emb|AL627095.8| Human DNA sequence from clone RP11-107G24 on chromosome 1 Contains the 5' end of the gene for zinc finger protein (SBZF3) (FLJ44402), the 5' end of the gene for a novel protein similar to part of zinc finger protein (FLJ90293), a pseudogene similar to part of fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism) (FGFR3), the gene for a novel protein similar to zinc finger protein 136 (FLJ12606) and two CpG islands, complete sequence Length = 63417 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gcgccgccgcctcctccccg 243 |||||||||||||||||||| Sbjct: 63114 gcgccgccgcctcctccccg 63095
>emb|AL671309.6| Human DNA sequence from clone RP11-409O11 on chromosome 9 Contains the 5' UTR of the TMEM2 gene for transmembrane protein 2, the 3' end of a novel gene (CGI-67) and a CpG island, complete sequence Length = 117976 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cgcgccgccgcctcctcccc 242 |||||||||||||||||||| Sbjct: 12643 cgcgccgccgcctcctcccc 12624
>emb|AL390728.37| Human DNA sequence from clone RP11-488L18 on chromosome 1 Contains a pseudogene similar to part of fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism) (FGFR3), the ZNF124 gene for zinc finger protein 124 (HZF-16), a peroxisomal biogenesis factor 5 (PEX5) pseudogene, a zinc finger protein pseudogene, the 3' end of a novel transcript, a heat shock 70kDa protein 8 (HSPA8) pseudogene and five CpG islands, complete sequence Length = 123668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gcgccgccgcctcctccccg 243 |||||||||||||||||||| Sbjct: 1697 gcgccgccgcctcctccccg 1678
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 gatgtctttcgagccccagg 491 |||||||||||||||||||| Sbjct: 1485302 gatgtctttcgagccccagg 1485321
>gb|AY046006.1| Arabidopsis thaliana At5g52240 mRNA sequence Length = 861 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 377 cagatctatgacgtcacgcagagcagaatgttctatggacctggtggaccttatgc 432 ||||||||||| || || || ||||| |||||||| ||||| || ||||| ||||| Sbjct: 343 cagatctatgatgttacacaaagcaggatgttctacggaccaggaggaccatatgc 398
>ref|XM_791565.1| PREDICTED: Strongylocentrotus purpuratus similar to pancreas-enriched phospholipase C (LOC592022), partial mRNA Length = 5412 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 agagtgccccgcccctcatc 46 |||||||||||||||||||| Sbjct: 968 agagtgccccgcccctcatc 987
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence Length = 121130 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gcagcgatggcggtggcggagctc 112 ||||||| |||||||||||||||| Sbjct: 87253 gcagcgacggcggtggcggagctc 87276
>emb|AJ851658.1| Gallus gallus mRNA for hypothetical protein, clone 15j12 Length = 3189 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggagccgctcccgccgcccg 290 |||||||||||||||||||| Sbjct: 190 ggagccgctcccgccgcccg 209
>emb|AJ720620.1| Gallus gallus mRNA for hypothetical protein, clone 21m6 Length = 3492 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gcgccgccgcctcctccccg 243 |||||||||||||||||||| Sbjct: 234 gcgccgccgcctcctccccg 215
>dbj|AK127619.1| Homo sapiens cDNA FLJ45717 fis, clone FELNG2001613 Length = 2258 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcgccgccgcctcctccccg 243 |||||||||||||||||||| Sbjct: 832 gcgccgccgcctcctccccg 851
>ref|NM_141571.2| Drosophila melanogaster CG8223-RA (CG8223), mRNA Length = 1997 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 agcagcgatggcggtggcggagct 111 |||||| ||||||||||||||||| Sbjct: 835 agcagcaatggcggtggcggagct 858
>gb|AY069666.1| Drosophila melanogaster LD44305 full length cDNA Length = 1997 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 agcagcgatggcggtggcggagct 111 |||||| ||||||||||||||||| Sbjct: 823 agcagcaatggcggtggcggagct 846
>gb|AC009512.6| Drosophila melanogaster, chromosome 3R, region 85B-85B, BAC clone BACR01F13, complete sequence Length = 167467 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 agcagcgatggcggtggcggagct 111 |||||| ||||||||||||||||| Sbjct: 37456 agcagcaatggcggtggcggagct 37433
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gcagcgatggcggtggcggagctc 112 ||||||| |||||||||||||||| Sbjct: 22021331 gcagcgacggcggtggcggagctc 22021354
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cgcgccgccgcctcctcccc 242 |||||||||||||||||||| Sbjct: 2477170 cgcgccgccgcctcctcccc 2477151
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgccgccgcctcctccccgg 244 |||||||||||||||||||| Sbjct: 4219929 cgccgccgcctcctccccgg 4219910
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete sequence Length = 99855 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gcagcgatggcggtggcggagctc 112 ||||||| |||||||||||||||| Sbjct: 93902 gcagcgacggcggtggcggagctc 93925
>gb|AC008314.7|AC008314 Drosophila melanogaster, chromosome 3R, region 85B-85B, BAC clone BACR02B21, complete sequence Length = 186322 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 agcagcgatggcggtggcggagct 111 |||||| ||||||||||||||||| Sbjct: 51163 agcagcaatggcggtggcggagct 51186
>emb|BX822976.1|CNS0A5X4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1777 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 tgaggaggagctccgccagt 329 |||||||||||||||||||| Sbjct: 1450 tgaggaggagctccgccagt 1469
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 ccggcagcggccgcgcgaggagcc 264 |||||||| ||||||||||||||| Sbjct: 1904824 ccggcagccgccgcgcgaggagcc 1904801
>ref|NM_207401.1| Homo sapiens FLJ45717 protein (FLJ45717), mRNA Length = 2258 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcgccgccgcctcctccccg 243 |||||||||||||||||||| Sbjct: 832 gcgccgccgcctcctccccg 851
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cgcgccgccgcctcctcccc 242 |||||||||||||||||||| Sbjct: 155580 cgcgccgccgcctcctcccc 155561
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cgcgccgccgcctcctcccc 242 |||||||||||||||||||| Sbjct: 63760 cgcgccgccgcctcctcccc 63741
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cgccgccgcgctgtaccacg 206 |||||||||||||||||||| Sbjct: 93032 cgccgccgcgctgtaccacg 93051
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgccgccgcctcctccccgg 244 |||||||||||||||||||| Sbjct: 40983 cgccgccgcctcctccccgg 40964
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cgcgccgccgcctcctcccc 242 |||||||||||||||||||| Sbjct: 8540 cgcgccgccgcctcctcccc 8559
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cgcgccgccgcctcctcccc 242 |||||||||||||||||||| Sbjct: 136698 cgcgccgccgcctcctcccc 136717
>dbj|AK120536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129B17, full insert sequence Length = 2063 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cgccgccgcgctgtaccacg 206 |||||||||||||||||||| Sbjct: 1745 cgccgccgcgctgtaccacg 1726
>dbj|AK106523.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D07, full insert sequence Length = 1236 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cgcgccgccgcctcctcccc 242 |||||||||||||||||||| Sbjct: 25 cgcgccgccgcctcctcccc 44
>dbj|AK073022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149P22, full insert sequence Length = 1367 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cgccgccgcctcctccccgg 244 |||||||||||||||||||| Sbjct: 193 cgccgccgcctcctccccgg 212
>gb|AY106423.1| Zea mays PCO101267 mRNA sequence Length = 791 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 atcttcgcgccgccgcctcc 237 |||||||||||||||||||| Sbjct: 194 atcttcgcgccgccgcctcc 213
>gb|AE003680.4| Drosophila melanogaster chromosome 3R, section 18 of 118 of the complete sequence Length = 270517 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 agcagcgatggcggtggcggagct 111 |||||| ||||||||||||||||| Sbjct: 92025 agcagcaatggcggtggcggagct 92048
>gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromosome ul, complete sequence Length = 231142 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggagccgctcccgccgcccg 290 |||||||||||||||||||| Sbjct: 98995 ggagccgctcccgccgcccg 99014
>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete sequence Length = 179661 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 cggagccgctcccgccgccc 289 |||||||||||||||||||| Sbjct: 163297 cggagccgctcccgccgccc 163316
>gb|AC135290.5| Mus musculus BAC clone RP23-58D13 from 18, complete sequence Length = 233915 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ccccgcccctcatccccgag 52 |||||||||||||||||||| Sbjct: 137972 ccccgcccctcatccccgag 137991 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,788,717 Number of Sequences: 3902068 Number of extensions: 3788717 Number of successful extensions: 117222 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115199 Number of HSP's gapped (non-prelim): 2015 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
