ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49d12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104299.1| Zea mays PCO075569 mRNA sequence Length = 2139 Score = 79.8 bits (40), Expect = 7e-13 Identities = 52/56 (92%) Strand = Plus / Plus Query: 6 tttgtttctttatttcctaacaagaacagcaatgggcgtggaattgttaatgtgcc 61 ||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||| Sbjct: 252 tttgtttctttatttcccaacaagaacagcaatgggcttggatttgttgatgtgcc 307
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 71.9 bits (36), Expect = 2e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 6 tttgtttctttatttcctaacaagaacagcaatgggcgtggaattgttaatgtgcc 61 |||| ||||||||||||| ||||||||||||||||| |||||||||| ||||||| Sbjct: 21240139 tttgcttctttatttcctttcaagaacagcaatgggcttggaattgttgatgtgcc 21240084
>dbj|AK071684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108B15, full insert sequence Length = 1256 Score = 71.9 bits (36), Expect = 2e-10 Identities = 51/56 (91%) Strand = Plus / Plus Query: 6 tttgtttctttatttcctaacaagaacagcaatgggcgtggaattgttaatgtgcc 61 |||| ||||||||||||| ||||||||||||||||| |||||||||| ||||||| Sbjct: 303 tttgcttctttatttcctttcaagaacagcaatgggcttggaattgttgatgtgcc 358
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 71.9 bits (36), Expect = 2e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 6 tttgtttctttatttcctaacaagaacagcaatgggcgtggaattgttaatgtgcc 61 |||| ||||||||||||| ||||||||||||||||| |||||||||| ||||||| Sbjct: 110896 tttgcttctttatttcctttcaagaacagcaatgggcttggaattgttgatgtgcc 110841
>dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEB5 Length = 74968 Score = 42.1 bits (21), Expect = 0.15 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 tgtttctttatttcctaacaa 28 ||||||||||||||||||||| Sbjct: 70214 tgtttctttatttcctaacaa 70234
>emb|AL139317.5|CNS01DXI Human chromosome 14 DNA sequence BAC R-589M4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 190648 Score = 42.1 bits (21), Expect = 0.15 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 tagctttgtttctttatttcc 22 ||||||||||||||||||||| Sbjct: 73757 tagctttgtttctttatttcc 73777
>emb|BX324229.7| Zebrafish DNA sequence from clone RP71-10D19, complete sequence Length = 72241 Score = 40.1 bits (20), Expect = 0.58 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tgtttctttatttcctaaca 27 |||||||||||||||||||| Sbjct: 4783 tgtttctttatttcctaaca 4802
>gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, complete sequence Length = 210088 Score = 40.1 bits (20), Expect = 0.58 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 atttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||||| Sbjct: 90283 atttcctgacaagaacagcaatgg 90260
>emb|AL591865.8| Mouse DNA sequence from clone RP23-14G21 on chromosome 5, complete sequence Length = 251952 Score = 40.1 bits (20), Expect = 0.58 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 atttcctaacaagaacagcaatgg 40 ||||||||| |||||||||||||| Sbjct: 28272 atttcctaagaagaacagcaatgg 28295
>gb|AY486903.1| Hevea brasiliensis clone gHbCIRTAs2748 microsatellite sequence Length = 266 Score = 38.2 bits (19), Expect = 2.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 ttctttatttcctaacaagaaca 33 |||||||||||| |||||||||| Sbjct: 153 ttctttatttcccaacaagaaca 131
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 tcctaacaagaacagcaat 38 ||||||||||||||||||| Sbjct: 13699368 tcctaacaagaacagcaat 13699350
>gb|AC153504.6| Mus musculus 10 BAC RP23-324E2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200051 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 ctagctttgtttctttatt 19 ||||||||||||||||||| Sbjct: 169579 ctagctttgtttctttatt 169597
>emb|CT025689.6| Mouse DNA sequence from clone RP24-236L7 on chromosome 14, complete sequence Length = 177482 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 ctagctttgtttctttatt 19 ||||||||||||||||||| Sbjct: 139957 ctagctttgtttctttatt 139939
>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence Length = 186870 Score = 38.2 bits (19), Expect = 2.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 ttctttatttcctaacaagaaca 33 ||||||||||||||| ||||||| Sbjct: 130521 ttctttatttcctaagaagaaca 130543
>gb|AC121773.3| Mus musculus BAC clone RP23-349P14 from chromosome 1, complete sequence Length = 191790 Score = 38.2 bits (19), Expect = 2.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 tagctttgtttctttatttccta 24 |||||||||| |||||||||||| Sbjct: 118795 tagctttgttcctttatttccta 118773
>emb|AL645585.11| Human DNA sequence from clone RP13-520K9 on chromosome X Contains a novel gene (FLJ35782), complete sequence Length = 55870 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcct 23 ||||||||||||||||||| Sbjct: 43709 ctttgtttctttatttcct 43691
>emb|AL772364.20| Mouse DNA sequence from clone RP23-242C19 on chromosome 11 Contains a ribosomal protein S16 (Rps16) pseudogene, the B3gnt1 gene for beta-1,3-N-acetylglucosaminyltransferase 1, the Murr1 gene for U2af1-rs1 region 1, the U2af1-rs1 gene for U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 (related sequence 1) and two CpG islands, complete sequence Length = 210863 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 agctttgtttctttatttc 21 ||||||||||||||||||| Sbjct: 28794 agctttgtttctttatttc 28776
>emb|AL596110.15| Mouse DNA sequence from clone RP23-330N10 on chromosome 11 Contains the 3' end of a variant of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik), the Adora2b gene for adenosine A2b receptor, the gene for a novel protein (2410012H22Rik), a somatic cytochrome c (Cycs) pseudogene, a novel gene, a novel pseudogene, the gene for a novel protein (2810460C24Rik), the 3' end of the Ncor1 gene for nuclear receptor co-repressor 1 and two CpG islands, complete sequence Length = 214834 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 agctttgtttctttatttc 21 ||||||||||||||||||| Sbjct: 48279 agctttgtttctttatttc 48297
>emb|AJ131519.1|LBA131519 Lactobacillus bacteriophage phi adh complete genome Length = 43785 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tagctttgtttctttattt 20 ||||||||||||||||||| Sbjct: 533 tagctttgtttctttattt 551
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 tctttatttcctaacaaga 30 ||||||||||||||||||| Sbjct: 87571 tctttatttcctaacaaga 87589
>gb|AC104071.3| Homo sapiens BAC clone RP11-315A17 from 4, complete sequence Length = 184001 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 tttgtttctttatttccta 24 ||||||||||||||||||| Sbjct: 118254 tttgtttctttatttccta 118236
>gb|AC020734.6| Homo sapiens BAC clone RP11-665I14 from 4, complete sequence Length = 196550 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 tttgtttctttatttccta 24 ||||||||||||||||||| Sbjct: 172988 tttgtttctttatttccta 173006
>dbj|AK047212.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930036G08 product:pre-mRNA protein kinase, full insert sequence Length = 3212 Score = 38.2 bits (19), Expect = 2.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 ttctttatttcctaacaagaaca 33 ||||||||||||||| ||||||| Sbjct: 2129 ttctttatttcctaagaagaaca 2107
>dbj|AK047365.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930053H17 product:pre-mRNA protein kinase, full insert sequence Length = 3212 Score = 38.2 bits (19), Expect = 2.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 ttctttatttcctaacaagaaca 33 ||||||||||||||| ||||||| Sbjct: 2129 ttctttatttcctaagaagaaca 2107
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 tctttatttcctaacaaga 30 ||||||||||||||||||| Sbjct: 17284708 tctttatttcctaacaaga 17284690
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 tagctttgtttctttattt 20 ||||||||||||||||||| Sbjct: 27085547 tagctttgtttctttattt 27085529
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 tcctaacaagaacagcaat 38 ||||||||||||||||||| Sbjct: 13694343 tcctaacaagaacagcaat 13694325
>gb|BC027379.1| Mus musculus, clone IMAGE:4953250, mRNA Length = 1264 Score = 38.2 bits (19), Expect = 2.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 ttctttatttcctaacaagaaca 33 ||||||||||||||| ||||||| Sbjct: 166 ttctttatttcctaagaagaaca 144
>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0033D20, from chromosome 3, complete sequence Length = 128707 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 tcctaacaagaacagcaat 38 ||||||||||||||||||| Sbjct: 90040 tcctaacaagaacagcaat 90022
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 tagctttgtttctttattt 20 ||||||||||||||||||| Sbjct: 54357 tagctttgtttctttattt 54339
>gb|AC114632.9| Mus musculus chromosome 5, clone RP24-114E20, complete sequence Length = 160308 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcct 23 ||||||||||||||||||| Sbjct: 60788 ctttgtttctttatttcct 60770
>dbj|AK067258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095H15, full insert sequence Length = 2438 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 tctttatttcctaacaaga 30 ||||||||||||||||||| Sbjct: 2421 tctttatttcctaacaaga 2403
>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204618 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 ctagctttgtttctttatt 19 ||||||||||||||||||| Sbjct: 64127 ctagctttgtttctttatt 64145
>dbj|AP002518.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-64D24, complete sequence Length = 164795 Score = 38.2 bits (19), Expect = 2.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 tttgtttctttatttcctaacaa 28 ||||||||||||||||| ||||| Sbjct: 83386 tttgtttctttatttccaaacaa 83408
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 tctttatttcctaacaaga 30 ||||||||||||||||||| Sbjct: 17293748 tctttatttcctaacaaga 17293730
>dbj|AP005227.3| Homo sapiens genomic DNA, chromosome 18 clone:CTD-2348G3, complete sequence Length = 127998 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 agctttgtttctttatttc 21 ||||||||||||||||||| Sbjct: 62452 agctttgtttctttatttc 62470
>emb|AL845280.4| Mouse DNA sequence from clone RP23-265L1 on chromosome X, complete sequence Length = 142846 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tagctttgtttctttattt 20 ||||||||||||||||||| Sbjct: 42298 tagctttgtttctttattt 42316
>gb|M62697.1|BADLGADH Bacteriophage adh repeat region and integrase (intG) gene, complete cds Length = 1969 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 tagctttgtttctttattt 20 ||||||||||||||||||| Sbjct: 1193 tagctttgtttctttattt 1175
>gb|AY090554.1| Microtus kirgisorum HMG14, HL30, MKK2 pseudogenes, complete sequences; and xist gene, complete sequence Length = 37042 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 30482 tttgtttctttatttcct 30499
>gb|AC146060.4| Pan troglodytes BAC clone RP43-14P21 from 7, complete sequence Length = 192671 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 tagctttgtttctttatt 19 |||||||||||||||||| Sbjct: 174949 tagctttgtttctttatt 174932
>gb|AC124719.3| Mus musculus BAC clone RP23-382J10 from chromosome 12, complete sequence Length = 191038 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 3 agctttgtttctttatttccta 24 |||||| ||||||||||||||| Sbjct: 173468 agctttatttctttatttccta 173447
>gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome 17, complete sequence Length = 203971 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 24 aacaagaacagcaatggg 41 |||||||||||||||||| Sbjct: 97729 aacaagaacagcaatggg 97746
>gb|AC158933.3| Mus musculus chromosome 1, clone RP23-300M22, complete sequence Length = 152221 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 30483 ttcctaaaaagaacagcaatgg 30462
>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome Length = 235645 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 57549 ggcgtggaattgttaatg 57566
>gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, complete sequence Length = 227254 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 212223 tttgtttctttatttcct 212240
>gb|AY486473.1|AY486470S04 Human herpesvirus 5 strain Toledo genome, partial sequence Length = 29148 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 5176 ggcgtggaattgttaatg 5193
>gb|AC144671.3| Mus musculus BAC clone RP24-292O2 from chromosome 9, complete sequence Length = 153253 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 135230 tttgtttctttatttcct 135213
>gb|AC124706.4| Mus musculus BAC clone RP24-69G17 from chromosome 5, complete sequence Length = 186703 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 ctttgtttctttatttcc 22 |||||||||||||||||| Sbjct: 185740 ctttgtttctttatttcc 185757
>gb|AC142101.4| Mus musculus BAC clone RP24-322G3 from chromosome 19, complete sequence Length = 210803 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 166651 gctttgtttctttatttc 166634
>emb|CT025612.11| Mouse DNA sequence from clone RP23-430O20 on chromosome 9, complete sequence Length = 185954 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 36626 tttgtttctttatttcct 36609
>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence Length = 233739 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 164662 ggcgtggaattgttaatg 164645
>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence Length = 229209 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 170629 ggcgtggaattgttaatg 170612
>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence Length = 234881 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 93260 ggcgtggaattgttaatg 93277
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence Length = 226889 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 166062 ggcgtggaattgttaatg 166045
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence Length = 229700 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 170728 ggcgtggaattgttaatg 170711
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence Length = 229483 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 89059 ggcgtggaattgttaatg 89076
>emb|CT009659.6| Mouse DNA sequence from clone CH29-604F11 on chromosome 17, complete sequence Length = 147269 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 aacaagaacagcaatggg 41 |||||||||||||||||| Sbjct: 118192 aacaagaacagcaatggg 118175
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome Length = 231236 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 55755 ggcgtggaattgttaatg 55772
>gb|AC140222.3| Mus musculus BAC clone RP24-330A7 from chromosome 9, complete sequence Length = 145102 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcctaac 26 ||||||||| |||||||||||| Sbjct: 13343 ctttgtttcattatttcctaac 13322
>gb|AC124422.5| Mus musculus BAC clone RP24-326L13 from chromosome 9, complete sequence Length = 174375 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcctaac 26 ||||||||| |||||||||||| Sbjct: 157648 ctttgtttcattatttcctaac 157627
>gb|AC124402.5| Mus musculus BAC clone RP24-365M23 from chromosome 12, complete sequence Length = 205782 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 3 agctttgtttctttatttccta 24 |||||| ||||||||||||||| Sbjct: 51096 agctttatttctttatttccta 51075
>gb|AC122794.3| Mus musculus BAC clone RP24-202L5 from chromosome 8, complete sequence Length = 157120 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcc 22 |||||||||||||||||| Sbjct: 66158 ctttgtttctttatttcc 66141
>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence Length = 191674 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 47772 tttgtttctttatttcct 47789
>emb|CR759824.9| Zebrafish DNA sequence from clone DKEY-81E3 in linkage group 13, complete sequence Length = 174086 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 128450 gctttgtttctttatttc 128433
>ref|XM_725120.1| Plasmodium yoelii yoelii str. 17XNL chloroquine resistance marker protein (PY02340) partial mRNA Length = 10950 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ttgtttctttatttccta 24 |||||||||||||||||| Sbjct: 10612 ttgtttctttatttccta 10595
>gb|AY223523.1| Human herpesvirus 5 strain Towne DNA processivity factor (UL44) gene, complete cds Length = 1302 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 254 ggcgtggaattgttaatg 237
>gb|AC005536.2| Homo sapiens BAC clone GS1-115E6 from 7, complete sequence Length = 165527 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 tagctttgtttctttatt 19 |||||||||||||||||| Sbjct: 139722 tagctttgtttctttatt 139705
>ref|XM_672112.1| Plasmodium berghei strain ANKA hypothetical protein (PB100542.00.0) partial mRNA Length = 1803 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ttgtttctttatttccta 24 |||||||||||||||||| Sbjct: 1465 ttgtttctttatttccta 1448
>gb|AC110028.8| Mus musculus chromosome 6, clone RP23-44E17, complete sequence Length = 243770 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 126103 ttcctaaaaagaacagcaatgg 126124
>emb|BX323802.24| Zebrafish DNA sequence from clone DKEY-104I9 in linkage group 10, complete sequence Length = 109743 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 87782 gctttgtttctttatttc 87765
>emb|BX640465.7| Zebrafish DNA sequence from clone CH211-198B21 in linkage group 9, complete sequence Length = 214459 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 50257 gctttgtttctttatttc 50240
>emb|AL391374.9| Human DNA sequence from clone RP11-631G24 on chromosome 13 Contains a novel gene, complete sequence Length = 172883 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 tttctttatttcctaaca 27 |||||||||||||||||| Sbjct: 70128 tttctttatttcctaaca 70145
>emb|AL354760.11| Human DNA sequence from clone RP4-671G15 on chromosome 1p13.1-13.3 Contains the 3' end of the gene for a novel protein, the 5' end of the WNT2B gene for wingless-type MMTV integration site family, member 2B and a CpG island, complete sequence Length = 111977 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 82930 tttgtttctttatttcct 82913
>gb|AC095504.7| Rattus norvegicus 2 BAC CH230-7P18 (Children's Hospital Oakland Research Institute) complete sequence Length = 227012 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 43 gtggaattgttaatgtgc 60 |||||||||||||||||| Sbjct: 113252 gtggaattgttaatgtgc 113235
>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome Length = 229354 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 40 ggcgtggaattgttaatg 57 |||||||||||||||||| Sbjct: 56259 ggcgtggaattgttaatg 56276
>gb|AC131098.3| Homo sapiens BAC clone RP11-1226D22 from 4, complete sequence Length = 71827 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 tagctttgtttctttatt 19 |||||||||||||||||| Sbjct: 45781 tagctttgtttctttatt 45798
>emb|BX255938.7| Mouse DNA sequence from clone RP23-333B5 on chromosome 11 Contains part of a novel gene, complete sequence Length = 207346 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 17 atttcctaacaagaacagcaat 38 ||||||||| |||||||||||| Sbjct: 96870 atttcctaagaagaacagcaat 96891
>emb|AL645747.11| Mouse DNA sequence from clone RP23-436D9 on chromosome 11 Contains a novel gene and a signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (Stam) pseudogene, complete sequence Length = 172052 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 agctttgtttctttattt 20 |||||||||||||||||| Sbjct: 44174 agctttgtttctttattt 44157
>emb|AL845508.11| Mouse DNA sequence from clone RP23-338N12 on chromosome 4 Contains a ribosomal protein L27A (Rpl27a) pseudogene, a large ribosomal protein P1 (Rplp1) pseudogene, a developmentally regulated GTP binding protein 1 (Drg1) pseudogene and part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 141019 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 19 ttcctaacaagaacagcaatgg 40 |||||||| ||||||||||||| Sbjct: 65371 ttcctaactagaacagcaatgg 65350
>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence Length = 189532 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcc 22 |||||||||||||||||| Sbjct: 27810 ctttgtttctttatttcc 27793
>emb|BX855606.3| Mouse DNA sequence from clone RP24-136M10 on chromosome 4, complete sequence Length = 79882 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 18806 ttcctaaaaagaacagcaatgg 18785
>emb|BX629349.6| Zebrafish DNA sequence from clone CH211-53P9 in linkage group 5, complete sequence Length = 142044 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 139602 gctttgtttctttatttc 139619
>gb|AC074177.34| Mus musculus strain C57BL/6J clone rp23-157n16 map 9, complete sequence Length = 195013 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 52497 tttgtttctttatttcct 52480
>emb|AL731773.20| Mouse DNA sequence from clone RP23-152G20 on chromosome X, complete sequence Length = 162215 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 19 ttcctaacaagaacagcaatgg 40 |||||||| ||||||||||||| Sbjct: 45830 ttcctaaccagaacagcaatgg 45851
>dbj|AB225892.1| Aspergillus oryzae cDNA, contig sequence: AoEST2747 Length = 872 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 acaagaacagcaatgggc 42 |||||||||||||||||| Sbjct: 56 acaagaacagcaatgggc 39
>gb|AC102341.10| Mus musculus chromosome 8, clone RP23-214E1, complete sequence Length = 187701 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 tttctttatttcctaaca 27 |||||||||||||||||| Sbjct: 101625 tttctttatttcctaaca 101608
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 acaagaacagcaatgggc 42 |||||||||||||||||| Sbjct: 1965852 acaagaacagcaatgggc 1965835
>gb|AC027670.6| Homo sapiens chromosome 10 clone RP11-176H12, complete sequence Length = 191805 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 tagctttgtttctttatttcct 23 ||||||| |||||||||||||| Sbjct: 90549 tagctttatttctttatttcct 90528
>gb|AC091785.5| Genomic sequence for Mus musculus, clone RP23-349P1, complete sequence Length = 178271 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 44 tggaattgttaatgtgcc 61 |||||||||||||||||| Sbjct: 22148 tggaattgttaatgtgcc 22131
>gb|AC109474.2| Homo sapiens chromosome 5 clone RP11-414I19, complete sequence Length = 180650 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 119714 tttgtttctttatttcct 119697
>gb|AC044893.5| Homo sapiens chromosome 8, clone RP11-696E24, complete sequence Length = 190121 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 ttctttatttcctaacaagaac 32 |||||||||||| ||||||||| Sbjct: 184521 ttctttatttcccaacaagaac 184500
>dbj|AK136465.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030602I02 product:unclassifiable, full insert sequence Length = 3656 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 1497 ttcctaaaaagaacagcaatgg 1518
>emb|BX571800.8| Zebrafish DNA sequence from clone DKEY-29B15 in linkage group 5, complete sequence Length = 195520 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 61854 gctttgtttctttatttc 61837
>gb|AC161266.2| Mus musculus BAC clone RP23-231B13 from chromosome 13, complete sequence Length = 190192 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 86736 ttcctaaaaagaacagcaatgg 86757
>emb|BX322601.9| Zebrafish DNA sequence from clone DKEY-170H8 in linkage group 7, complete sequence Length = 210153 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ttgtttctttatttccta 24 |||||||||||||||||| Sbjct: 33101 ttgtttctttatttccta 33084
>emb|BX088704.7| Zebrafish DNA sequence from clone CH211-208M6 in linkage group 7, complete sequence Length = 209042 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 ttgtttctttatttccta 24 |||||||||||||||||| Sbjct: 48083 ttgtttctttatttccta 48066
>gb|AC008664.6| Homo sapiens chromosome 5 clone CTB-34B5, complete sequence Length = 132185 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 12 tctttatttcctaacaagaaca 33 |||||||| ||||||||||||| Sbjct: 39691 tctttattgcctaacaagaaca 39670
>gb|AC009392.6| Drosophila melanogaster, chromosome 2L, region 23A-23E, BAC clone BACR42J13, complete sequence Length = 179125 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 ttatttcctaacaagaac 32 |||||||||||||||||| Sbjct: 83011 ttatttcctaacaagaac 83028
>emb|BX322797.11| Zebrafish DNA sequence from clone CH211-214H9 in linkage group 1, complete sequence Length = 114797 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 ctttatttcctaacaaga 30 |||||||||||||||||| Sbjct: 99933 ctttatttcctaacaaga 99916
>gb|AC154297.3| Mus musculus BAC clone RP23-427N21 from chromosome 13, complete sequence Length = 172087 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 59289 ttcctaaaaagaacagcaatgg 59310
>gb|AC022324.5|AC022324 Homo sapiens BAC clone RP11-386M5 from 3, complete sequence Length = 188296 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 tttatttcctaacaagaa 31 |||||||||||||||||| Sbjct: 123908 tttatttcctaacaagaa 123925
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 24 aacaagaacagcaatggg 41 |||||||||||||||||| Sbjct: 27044089 aacaagaacagcaatggg 27044106
>emb|BX248401.10| Zebrafish DNA sequence from clone CH211-233P10, complete sequence Length = 144874 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 73850 gctttgtttctttatttc 73833
>gb|AC020698.4| Homo sapiens BAC clone RP11-45F23 from 4, complete sequence Length = 148418 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 6 tttgtttctttatttcctaaca 27 ||||||||||| |||||||||| Sbjct: 41237 tttgtttctttgtttcctaaca 41216
>emb|BX088566.6| Zebrafish DNA sequence from clone DKEY-63E5 in linkage group 6, complete sequence Length = 195778 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 23573 tttgtttctttatttcct 23556
>gb|AY941322.1| Glarea lozoyensis polyketide syntase 2 (pks2) gene, complete cds Length = 9951 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 36 aatgggcgtggaattgtt 53 |||||||||||||||||| Sbjct: 2987 aatgggcgtggaattgtt 3004
>gb|AC154281.2| Mus musculus BAC clone RP24-271P6 from chromosome 13, complete sequence Length = 182797 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 171498 ttcctaaaaagaacagcaatgg 171519
>gb|AC012158.32| Homo sapiens 12 BAC RP11-290I21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151655 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcc 22 |||||||||||||||||| Sbjct: 86766 ctttgtttctttatttcc 86749
>gb|AC133565.5| Homo sapiens chromosome 16 clone RP11-895K13, complete sequence Length = 168538 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 tagctttgtttctttatt 19 |||||||||||||||||| Sbjct: 124506 tagctttgtttctttatt 124523
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 24 aacaagaacagcaatggg 41 |||||||||||||||||| Sbjct: 15738 aacaagaacagcaatggg 15755
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 24 aacaagaacagcaatggg 41 |||||||||||||||||| Sbjct: 97291 aacaagaacagcaatggg 97308
>emb|BX004839.9| Zebrafish DNA sequence from clone DKEY-18A23 in linkage group 6, complete sequence Length = 223000 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 136338 tttgtttctttatttcct 136321
>emb|BX005162.9| Mouse DNA sequence from clone RP23-359O2 on chromosome X, complete sequence Length = 83075 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 6865 ttcctaaaaagaacagcaatgg 6844
>dbj|AK120141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028D07, full insert sequence Length = 2904 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 aacaagaacagcaatggg 41 |||||||||||||||||| Sbjct: 1905 aacaagaacagcaatggg 1888
>dbj|AK073914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N24, full insert sequence Length = 3037 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 aacaagaacagcaatggg 41 |||||||||||||||||| Sbjct: 2022 aacaagaacagcaatggg 2005
>emb|AL590078.2|HS381K22 Homo sapiens chromosome 9 BAC RP11-381K22, complete sequence Length = 203175 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 129529 tttgtttctttatttcct 129546
>emb|BX957258.12| Zebrafish DNA sequence from clone DKEY-285J17 in linkage group 22, complete sequence Length = 169327 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 agctttgtttctttattt 20 |||||||||||||||||| Sbjct: 160163 agctttgtttctttattt 160146
>emb|AL714003.6| Zebrafish DNA sequence from clone BUSM1-167C3 in linkage group 9, complete sequence Length = 136185 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 128895 gctttgtttctttatttc 128912
>emb|AL731564.5| Zebrafish DNA sequence from clone XX-143E18 in linkage group 9, complete sequence Length = 38601 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 14564 gctttgtttctttatttc 14581
>emb|CR759796.17| Zebrafish DNA sequence from clone DKEY-18A10 in linkage group 10, complete sequence Length = 130961 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 gctttgtttctttatttc 21 |||||||||||||||||| Sbjct: 26965 gctttgtttctttatttc 26982
>gb|AC153555.5| Mus musculus 10 BAC RP23-193J20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208079 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 ctttgtttctttatttcc 22 |||||||||||||||||| Sbjct: 184443 ctttgtttctttatttcc 184460
>gb|AC004120.2|AC004120 Drosophila melanogaster, chromosome 2L, region 23B2-23C1, P1 clone DS07149, complete sequence Length = 40710 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 15 ttatttcctaacaagaac 32 |||||||||||||||||| Sbjct: 39507 ttatttcctaacaagaac 39490
>gb|AE003582.4| Drosophila melanogaster chromosome 2L, section 9 of 83 of the complete sequence Length = 295132 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 ttatttcctaacaagaac 32 |||||||||||||||||| Sbjct: 272486 ttatttcctaacaagaac 272503
>emb|CT025939.7| Zebrafish DNA sequence from clone DKEY-99P10 in linkage group 5, complete sequence Length = 56634 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 33627 tttgtttctttatttcct 33610
>dbj|AP002360.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-111M22, complete sequences Length = 173379 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 ctttgtttctttatttcc 22 |||||||||||||||||| Sbjct: 139637 ctttgtttctttatttcc 139654
>gb|AC137126.13| Mus musculus chromosome 15, clone RP24-250I9, complete sequence Length = 193459 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 57953 tttgtttctttatttcct 57970
>emb|AL772305.15| Mouse DNA sequence from clone RP23-86E8 on chromosome 4, complete sequence Length = 260935 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 54448 tttgtttctttatttcct 54465
>gb|AC005558.1|AC005558 Drosophila melanogaster DNA sequence (P1s DS08923 (D95) and DS06400 (D74)), complete sequence Length = 124700 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 15 ttatttcctaacaagaac 32 |||||||||||||||||| Sbjct: 690 ttatttcctaacaagaac 673
>gb|AC140345.3| Mus musculus BAC clone RP24-66E22 from 13, complete sequence Length = 238541 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 237123 ttcctaaaaagaacagcaatgg 237144
>gb|AC127682.4| Mus musculus BAC clone RP24-170O17 from 8, complete sequence Length = 144298 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 tttctttatttcctaaca 27 |||||||||||||||||| Sbjct: 51872 tttctttatttcctaaca 51889
>gb|AC151909.5| Mus musculus BAC clone RP23-60H14 from chromosome 8, complete sequence Length = 208855 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 tttctttatttcctaaca 27 |||||||||||||||||| Sbjct: 41498 tttctttatttcctaaca 41481
>gb|AC122444.4| Mus musculus BAC clone RP24-232I9 from 9, complete sequence Length = 184253 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 89023 ttcctaaaaagaacagcaatgg 89002
>gb|AC131760.4| Mus musculus BAC clone RP24-220M2 from 10, complete sequence Length = 173472 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcc 22 |||||||||||||||||| Sbjct: 131850 ctttgtttctttatttcc 131833
>gb|AC134329.3| Mus musculus BAC clone RP24-310D17 from 10, complete sequence Length = 159173 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcc 22 |||||||||||||||||| Sbjct: 53984 ctttgtttctttatttcc 53967
>gb|AC136640.2| Mus musculus BAC clone RP23-2E24 from 12, complete sequence Length = 199358 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 108605 ttcctaaaaagaacagcaatgg 108626
>gb|AC154362.1| Mus musculus BAC clone RP23-154E1 from 14, complete sequence Length = 205650 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 16 tatttcctaacaagaacagcaa 37 |||||||| ||||||||||||| Sbjct: 139608 tatttcctcacaagaacagcaa 139629
>gb|AC124735.4| Mus musculus BAC clone RP23-310O18 from 5, complete sequence Length = 203527 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ctttgtttctttatttcc 22 |||||||||||||||||| Sbjct: 191297 ctttgtttctttatttcc 191280
>emb|AL691416.9| Mouse DNA sequence from clone RP23-110I8 on chromosome 2, complete sequence Length = 208363 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 194687 ttcctaaaaagaacagcaatgg 194666
>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete sequence Length = 217775 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 49330 ttcctaaaaagaacagcaatgg 49309
>emb|AL807831.6| Mouse DNA sequence from clone RP23-146I17 on chromosome X, complete sequence Length = 203118 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 19 ttcctaacaagaacagcaatgg 40 ||||||| |||||||||||||| Sbjct: 143706 ttcctaaaaagaacagcaatgg 143685
>emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chromosome X, complete sequence Length = 202500 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 agctttgtttctttattt 20 |||||||||||||||||| Sbjct: 182130 agctttgtttctttattt 182147
>emb|AL645508.14| Mouse DNA sequence from clone RP23-170H12 on chromosome 4, complete sequence Length = 207485 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 tttgtttctttatttcct 23 |||||||||||||||||| Sbjct: 34721 tttgtttctttatttcct 34738 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,035,937 Number of Sequences: 3902068 Number of extensions: 1035937 Number of successful extensions: 108494 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108014 Number of HSP's gapped (non-prelim): 480 length of query: 62 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 41 effective length of database: 17,151,101,840 effective search space: 703195175440 effective search space used: 703195175440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
