ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49d05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase Length = 2748 Score = 551 bits (278), Expect = e-154 Identities = 512/586 (87%), Gaps = 8/586 (1%) Strand = Plus / Plus Query: 31 agaaatggcgatggctaggacgacgacgctcctcctcgtcgccgcagctctcctcgcggc 90 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| Sbjct: 1795 agaaatggcgatggctaggacgacggcgctcctcctcgtcgccgcggctctcctggcggc 1854 Query: 91 ctcatgcagcgcatgggaggtcaacatccgcatgccgacgtcggcggcggacgtggacga 150 ||||| ||||||||||||||| ||||||| |||||| |||||||||| ||||||||| Sbjct: 1855 ctcatccagcgcatgggaggtgaacatccagatgccggcgtcggcggc---cgtggacga 1911 Query: 151 ggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggcaagcacgc 210 || |||| | ||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 1912 tgctgtgg---caccgctcatccacgcgctgcggccgctcctgggctccggcaagcaagc 1968 Query: 211 cggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactggaa 270 ||| ||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||| Sbjct: 1969 cggcgtggcgtgcgatagctggcggctgggcgtggaggcgtacaacgtgcgggactggaa 2028 Query: 271 gacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccatttccg 330 ||||||||| || | ||||||||||||||| || |||||||||||||||| ||| ||||| Sbjct: 2029 gacggtgccggccaactgcgagggctacgtggggcactacatgctcggcaaccacttccg 2088 Query: 331 ccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcac 390 ||||||| |||||||||||||||||||||| ||||||| |||||| |||||||||| | Sbjct: 2089 gcgcgactgcaaggtcgtcatcgaccaggccatcgcctacgtcgacggcctcaagctcgc 2148 Query: 391 cggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 450 |||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 2149 cggcaacggcaagg-acgtgtgggtcttcgacatcgacgagaccaccctctccaacctcc 2207 Query: 451 cctactacgccaagcacggcttcggggctacaccgttcaacgcgaccagcttcaacgcat 510 | |||||||||| ||||||||| ||||||| || | ||||||||| |||||| |||| | Sbjct: 2208 cttactacgccacgcacggctttggggctaggccatacaacgcgacgagcttcgacgcgt 2267 Query: 511 acgtgctacaggggagcgcgccagccctgccggagacgaagcggctgtac-acaagctgc 569 ||||| | ||||||| || || | |||||||||||||||||||| ||| ||||||| | Sbjct: 2268 acgtgatggaggggagtgcaccggtgctgccggagacgaagcggctctactacaagctac 2327 Query: 570 gctcgatcggcgtcaagccggtgttcctcaccggccggactgagga 615 | | | ||| |||||||||| ||| |||| |||||||| ||||| Sbjct: 2328 tcaaggtgggcatcaagccggtattcatcacaggccggacggagga 2373
>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3 gene) Length = 1152 Score = 551 bits (278), Expect = e-154 Identities = 512/586 (87%), Gaps = 8/586 (1%) Strand = Plus / Plus Query: 31 agaaatggcgatggctaggacgacgacgctcctcctcgtcgccgcagctctcctcgcggc 90 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| Sbjct: 199 agaaatggcgatggctaggacgacggcgctcctcctcgtcgccgcggctctcctggcggc 258 Query: 91 ctcatgcagcgcatgggaggtcaacatccgcatgccgacgtcggcggcggacgtggacga 150 ||||| ||||||||||||||| ||||||| |||||| |||||||||| ||||||||| Sbjct: 259 ctcatccagcgcatgggaggtgaacatccagatgccggcgtcggcggc---cgtggacga 315 Query: 151 ggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggcaagcacgc 210 || |||| | ||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 316 tgctgtgg---caccgctcatccacgcgctgcggccgctcctgggctccggcaagcaagc 372 Query: 211 cggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactggaa 270 ||| ||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||| Sbjct: 373 cggcgtggcgtgcgatagctggcggctgggcgtggaggcgtacaacgtgcgggactggaa 432 Query: 271 gacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccatttccg 330 ||||||||| || | ||||||||||||||| || |||||||||||||||| ||| ||||| Sbjct: 433 gacggtgccggccaactgcgagggctacgtggggcactacatgctcggcaaccacttccg 492 Query: 331 ccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcac 390 ||||||| |||||||||||||||||||||| ||||||| |||||| |||||||||| | Sbjct: 493 gcgcgactgcaaggtcgtcatcgaccaggccatcgcctacgtcgacggcctcaagctcgc 552 Query: 391 cggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 450 |||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 553 cggcaacggcaagg-acgtgtgggtcttcgacatcgacgagaccaccctctccaacctcc 611 Query: 451 cctactacgccaagcacggcttcggggctacaccgttcaacgcgaccagcttcaacgcat 510 | |||||||||| ||||||||| ||||||| || | ||||||||| |||||| |||| | Sbjct: 612 cttactacgccacgcacggctttggggctaggccatacaacgcgacgagcttcgacgcgt 671 Query: 511 acgtgctacaggggagcgcgccagccctgccggagacgaagcggctgtac-acaagctgc 569 ||||| | ||||||| || || | |||||||||||||||||||| ||| ||||||| | Sbjct: 672 acgtgatggaggggagtgcaccggtgctgccggagacgaagcggctctactacaagctac 731 Query: 570 gctcgatcggcgtcaagccggtgttcctcaccggccggactgagga 615 | | | ||| |||||||||| ||| |||| |||||||| ||||| Sbjct: 732 tcaaggtgggcatcaagccggtattcatcacaggccggacggagga 777
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 264 bits (133), Expect = 3e-67 Identities = 237/269 (88%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| |||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct: 92232 cgccggcgtggcgtgcgacagctggaggctggcggtggaggcgcacaacgtgatccggtg 92173 Query: 268 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccattt 327 |||||||||||| || |||||||||||||||||||||||||||||||||||| |||| | Sbjct: 92172 gaagacggtgccggccagctgcgagggctacgtcggccactacatgctcggcggccacta 92113 Query: 328 ccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagct 387 ||||||||||| || |||||| ||||| ||||| ||||||| || ||| ||||||||| Sbjct: 92112 ccgccgcgact-caccgtcgtcgtcgacgaggccatcgcctacgtggacagcctcaagct 92054 Query: 388 caccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacc 447 | ||||||||||||||| || ||||||| |||||||||||||||||| |||||||||||| Sbjct: 92053 cgccggcaacggcaagg-agatctgggtgttcgacatcgacgagacctccctctccaacc 91995 Query: 448 tcccctactacgccaagcacggcttcggg 476 ||||||||| |||||||||||| |||||| Sbjct: 91994 tcccctacttcgccaagcacggattcggg 91966 Score = 226 bits (114), Expect = 7e-56 Identities = 233/270 (86%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| |||||||||||||||||| ||| || |||||||| ||||||||| | || Sbjct: 105854 cgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtg 105795 Query: 268 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcag-ccatt 326 |||||||||||| || || |||||||||||||||||||||||||||||||| | ||| | Sbjct: 105794 gaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccact 105735 Query: 327 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 386 |||||| |||||| |||||||||||| ||||| ||||||| | ||| |||| ||| Sbjct: 105734 accgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagc 105675 Query: 387 tcaccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaac 446 || ||||||||||||||| || ||||||| |||||||||||||||||| ||||||||||| Sbjct: 105674 tctccggcaacggcaagg-agatctgggtgttcgacatcgacgagacctccctctccaac 105616 Query: 447 ctcccctactacgccaagcacggcttcggg 476 ||||||||||||||||||||||| |||||| Sbjct: 105615 ctcccctactacgccaagcacggattcggg 105586 Score = 218 bits (110), Expect = 2e-53 Identities = 233/270 (86%), Gaps = 3/270 (1%) Strand = Plus / Minus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 83956 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 83897 Query: 268 gaagacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 326 || ||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 83896 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 83838 Query: 327 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 386 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 83837 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 83778 Query: 387 tcaccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaac 446 || ||||||| ||||||| || ||||||| |||||||||||||||||| | ||||||||| Sbjct: 83777 tcgccggcaatggcaagg-agatctgggtgttcgacatcgacgagacctctctctccaac 83719 Query: 447 ctcccctactacgccaagcacggcttcggg 476 |||||||||||||||||||||||||||||| Sbjct: 83718 ctcccctactacgccaagcacggcttcggg 83689 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 92304 cgaggccgtggtggcgccgctcatccacgcgctgcggccgctgctgggctccggc 92250 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 105926 cgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggc 105872 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 84028 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 83974 Score = 67.9 bits (34), Expect = 4e-08 Identities = 116/142 (81%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5913 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 5854 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| |||||| |||| |||||| ||||||||| ||| Sbjct: 5853 ccggccatggcaagg-agatctgggtgttcgacgtcgatgagaccgccctctccaccctg 5795 Query: 450 ccctactacgccaagcacggct 471 |||||| | |||||||| |||| Sbjct: 5794 ccctaccaggccaagcatggct 5773 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggacca 618 |||||||||||||||||||||| || ||||| || |||||||| Sbjct: 104497 tcggcgtcaagccggtgttcctgacgggccgcaccgaggacca 104455 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 5532 tcggcatcaagccggtgttcctgaccgaccgcaccgaggaccag 5489 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccg 606 |||||||||||||||||||||| || ||||| Sbjct: 80511 tcggcgtcaagccggtgttcctaacaggccg 80481 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttc 595 |||||||||||||||||||| Sbjct: 90612 tcggcgtcaagccggtgttc 90593
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 264 bits (133), Expect = 3e-67 Identities = 237/269 (88%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| |||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct: 5559023 cgccggcgtggcgtgcgacagctggaggctggcggtggaggcgcacaacgtgatccggtg 5558964 Query: 268 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccattt 327 |||||||||||| || |||||||||||||||||||||||||||||||||||| |||| | Sbjct: 5558963 gaagacggtgccggccagctgcgagggctacgtcggccactacatgctcggcggccacta 5558904 Query: 328 ccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagct 387 ||||||||||| || |||||| ||||| ||||| ||||||| || ||| ||||||||| Sbjct: 5558903 ccgccgcgact-caccgtcgtcgtcgacgaggccatcgcctacgtggacagcctcaagct 5558845 Query: 388 caccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacc 447 | ||||||||||||||| || ||||||| |||||||||||||||||| |||||||||||| Sbjct: 5558844 cgccggcaacggcaagg-agatctgggtgttcgacatcgacgagacctccctctccaacc 5558786 Query: 448 tcccctactacgccaagcacggcttcggg 476 ||||||||| |||||||||||| |||||| Sbjct: 5558785 tcccctacttcgccaagcacggattcggg 5558757 Score = 226 bits (114), Expect = 7e-56 Identities = 233/270 (86%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| |||||||||||||||||| ||| || |||||||| ||||||||| | || Sbjct: 5572645 cgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtg 5572586 Query: 268 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcag-ccatt 326 |||||||||||| || || |||||||||||||||||||||||||||||||| | ||| | Sbjct: 5572585 gaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccact 5572526 Query: 327 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 386 |||||| |||||| |||||||||||| ||||| ||||||| | ||| |||| ||| Sbjct: 5572525 accgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagc 5572466 Query: 387 tcaccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaac 446 || ||||||||||||||| || ||||||| |||||||||||||||||| ||||||||||| Sbjct: 5572465 tctccggcaacggcaagg-agatctgggtgttcgacatcgacgagacctccctctccaac 5572407 Query: 447 ctcccctactacgccaagcacggcttcggg 476 ||||||||||||||||||||||| |||||| Sbjct: 5572406 ctcccctactacgccaagcacggattcggg 5572377 Score = 218 bits (110), Expect = 2e-53 Identities = 233/270 (86%), Gaps = 3/270 (1%) Strand = Plus / Minus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 5550747 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 5550688 Query: 268 gaagacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 326 || ||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 5550687 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 5550629 Query: 327 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 386 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 5550628 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 5550569 Query: 387 tcaccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaac 446 || ||||||| ||||||| || ||||||| |||||||||||||||||| | ||||||||| Sbjct: 5550568 tcgccggcaatggcaagg-agatctgggtgttcgacatcgacgagacctctctctccaac 5550510 Query: 447 ctcccctactacgccaagcacggcttcggg 476 |||||||||||||||||||||||||||||| Sbjct: 5550509 ctcccctactacgccaagcacggcttcggg 5550480 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5559095 cgaggccgtggtggcgccgctcatccacgcgctgcggccgctgctgggctccggc 5559041 Score = 93.7 bits (47), Expect = 7e-16 Identities = 123/147 (83%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || |||||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5429968 gccgcgactccgatgtggtcatcaacaaggccatcgcctacgccgagagcctcaagctct 5429909 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| ||||||||||||||||||||||||| || ||| Sbjct: 5429908 ccggccatggcaagg-agatctgggtgttcgacatcgacgagaccaccctcttcaccctg 5429850 Query: 450 ccctactacgccaagcacggcttcggg 476 |||||| | |||||||| |||| |||| Sbjct: 5429849 ccctaccaggccaagcatggctacggg 5429823 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 5572717 cgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggc 5572663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 5550819 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 5550765 Score = 67.9 bits (34), Expect = 4e-08 Identities = 116/142 (81%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5472704 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 5472645 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| |||||| |||| |||||| ||||||||| ||| Sbjct: 5472644 ccggccatggcaagg-agatctgggtgttcgacgtcgatgagaccgccctctccaccctg 5472586 Query: 450 ccctactacgccaagcacggct 471 |||||| | |||||||| |||| Sbjct: 5472585 ccctaccaggccaagcatggct 5472564 Score = 61.9 bits (31), Expect = 2e-06 Identities = 95/115 (82%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5453573 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 5453514 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctcca 444 |||||| ||||||| |||||||||| |||||| ||||||||||| | ||||||| Sbjct: 5453513 ccggcagtggcaagg-aggtctgggtgttcgacgtcgacgagaccgcactctcca 5453460 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggacca 618 |||||||||||||||||||||| || ||||| || |||||||| Sbjct: 5571288 tcggcgtcaagccggtgttcctgacgggccgcaccgaggacca 5571246 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 5472323 tcggcatcaagccggtgttcctgaccgaccgcaccgaggaccag 5472280 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 5452572 tcggcatcaagccggtgttcctaaccgaccgcaccgaggaccag 5452529 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccg 606 |||||||||||||||||||||| || ||||| Sbjct: 5547302 tcggcgtcaagccggtgttcctaacaggccg 5547272 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 265 ctggaagacggtgcccgcgagctgcgagggctacgtcg 302 ||||||||||||||| |||| ||||| |||||||||| Sbjct: 5464424 ctggaagacggtgccggcgaactgcgctggctacgtcg 5464387 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttc 595 |||||||||||||||||||| Sbjct: 5557403 tcggcgtcaagccggtgttc 5557384
>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full insert sequence Length = 1131 Score = 248 bits (125), Expect = 2e-62 Identities = 344/413 (83%), Gaps = 3/413 (0%) Strand = Plus / Plus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| |||||||||||||||||| ||| || |||||||| ||||||||| | || Sbjct: 217 cgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtg 276 Query: 268 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcag-ccatt 326 |||||||||||| || || |||||||||||||||||||||||||||||||| | ||| | Sbjct: 277 gaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccact 336 Query: 327 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 386 |||||| |||||| |||||||||||| ||||| ||||||| | ||| |||| ||| Sbjct: 337 accgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagc 396 Query: 387 tcaccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaac 446 || ||||||||||||||| || ||||||| |||||||||||||||||| ||||||||||| Sbjct: 397 tctccggcaacggcaagg-agatctgggtgttcgacatcgacgagacctccctctccaac 455 Query: 447 ctcccctactacgccaagcacggcttcggggctacaccgttcaacgcgaccagcttcaac 506 ||||||||||||||||||||||| ||||| ||||||| || ||| | || |||||| | Sbjct: 456 ctcccctactacgccaagcacggattcggagctacactgtacaatgatacgagcttccgc 515 Query: 507 gcatacgtgctacaggggagcgcgccagccctgccggagacgaagcggctgta-cacaag 565 | ||||||| | ||||||||||| || ||||||||||||| |||| |||| | | Sbjct: 516 gaatacgtggcggaagggagcgcgccggcgctgccggagacgaggcggttgtaccggcgg 575 Query: 566 ctgcgctcgatcggcgtcaagccggtgttcctcaccggccggactgaggacca 618 |||| | | |||||||||||||||||||||| || ||||| || |||||||| Sbjct: 576 ctgctccagctcggcgtcaagccggtgttcctgacgggccgcaccgaggacca 628 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 145 cgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggc 199
>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full insert sequence Length = 1076 Score = 222 bits (112), Expect = 1e-54 Identities = 253/296 (85%), Gaps = 3/296 (1%) Strand = Plus / Plus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 244 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 303 Query: 268 gaagacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 326 || ||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 304 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 362 Query: 327 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 386 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 363 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 422 Query: 387 tcaccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaac 446 || ||||||| ||||||| || ||||||| |||||||||||||||||| | ||||||||| Sbjct: 423 tcgccggcaatggcaagg-agatctgggtgttcgacatcgacgagacctctctctccaac 481 Query: 447 ctcccctactacgccaagcacggcttcggggctacaccgttcaacgcgaccagctt 502 ||||||||||||||||||||||||||||| || || || | ||||||||| ||||| Sbjct: 482 ctcccctactacgccaagcacggcttcggagcaacgccatacaacgcgacaagctt 537 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 172 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 226 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 576 tcggcgtcaagccggtgttcctcaccggccg 606 |||||||||||||||||||||| || ||||| Sbjct: 612 tcggcgtcaagccggtgttcctaacaggccg 642
>dbj|AK066719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082K18, full insert sequence Length = 2143 Score = 218 bits (110), Expect = 2e-53 Identities = 233/270 (86%), Gaps = 3/270 (1%) Strand = Plus / Plus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 242 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 301 Query: 268 gaagacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 326 || ||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 302 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 360 Query: 327 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 386 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 361 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 420 Query: 387 tcaccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaac 446 || ||||||| ||||||| || ||||||| |||||||||||||||||| | ||||||||| Sbjct: 421 tcgccggcaatggcaagg-agatctgggtgttcgacatcgacgagacctctctctccaac 479 Query: 447 ctcccctactacgccaagcacggcttcggg 476 |||||||||||||||||||||||||||||| Sbjct: 480 ctcccctactacgccaagcacggcttcggg 509 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 170 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 224
>dbj|AK110669.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-F12, full insert sequence Length = 953 Score = 216 bits (109), Expect = 7e-53 Identities = 232/269 (86%), Gaps = 3/269 (1%) Strand = Plus / Plus Query: 208 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 267 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 244 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 303 Query: 268 gaagacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 326 || ||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 304 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 362 Query: 327 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 386 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 363 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 422 Query: 387 tcaccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaac 446 || ||||||| ||||||| || ||||||| |||||||||||||||||| | ||||||||| Sbjct: 423 tcgccggcaatggcaagg-agatctgggtgttcgacatcgacgagacctctctctccaac 481 Query: 447 ctcccctactacgccaagcacggcttcgg 475 ||||||||||||||||||||||||||||| Sbjct: 482 ctcccctactacgccaagcacggcttcgg 510 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 148 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 202 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 172 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 226
>gb|AY106317.1| Zea mays PCO101473 mRNA sequence Length = 827 Score = 153 bits (77), Expect = 8e-34 Identities = 229/277 (82%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 344 gtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcaccggcaacggcaag 403 |||||||||||| ||||| ||||||| | ||| ||||||||| ||||||||||||| Sbjct: 27 gtcgtcatcgacgaggccatcgcctacgccgagggcctcaagctgggcggcaacggcaag 86 Query: 404 gcaggtctgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgccaa 463 | |||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||| Sbjct: 87 g-aggtctgggtcttcgatatcgacgagacgtccctctccaatctcccctactatgccac 145 Query: 464 gcacggcttcggggctacaccgttcaacgcgaccagcttcaacgcatacgtgctacaggg 523 ||||||||||| ||| | | ||||||||| |||||||||| |||||||| |||| Sbjct: 146 ccacggcttcggcactaagctatacaacgcgacgagcttcaacgagtacgtgctggaggg 205 Query: 524 gagcgcgccagccctgccggagacgaagcggctgtac-acaagctgcgctcgatcggcgt 582 ||||||||| | || ||||||||| ||||||||| | | ||||| |||| | ||| | Sbjct: 206 gagcgcgccggtgctcccggagacgcagcggctgttcaagaagctcgtctcgctgggcat 265 Query: 583 caagccggtgttcctcaccggccggactgaggaccag 619 ||||||||||||||| || ||||| || ||||||||| Sbjct: 266 caagccggtgttcctgacgggccgcaccgaggaccag 302
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 93.7 bits (47), Expect = 7e-16 Identities = 123/147 (83%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || |||||| || ||||| ||||||| | ||| |||||||||| Sbjct: 116642 gccgcgactccgatgtggtcatcaacaaggccatcgcctacgccgagagcctcaagctct 116583 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| ||||||||||||||||||||||||| || ||| Sbjct: 116582 ccggccatggcaagg-agatctgggtgttcgacatcgacgagaccaccctcttcaccctg 116524 Query: 450 ccctactacgccaagcacggcttcggg 476 |||||| | |||||||| |||| |||| Sbjct: 116523 ccctaccaggccaagcatggctacggg 116497 Score = 61.9 bits (31), Expect = 2e-06 Identities = 95/115 (82%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 140247 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 140188 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctcca 444 |||||| ||||||| |||||||||| |||||| ||||||||||| | ||||||| Sbjct: 140187 ccggcagtggcaagg-aggtctgggtgttcgacgtcgacgagaccgcactctcca 140134 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 139246 tcggcatcaagccggtgttcctaaccgaccgcaccgaggaccag 139203 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 265 ctggaagacggtgcccgcgagctgcgagggctacgtcg 302 ||||||||||||||| |||| ||||| |||||||||| Sbjct: 151098 ctggaagacggtgccggcgaactgcgctggctacgtcg 151061
>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full insert sequence Length = 1168 Score = 67.9 bits (34), Expect = 4e-08 Identities = 116/142 (81%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| |||||| |||| |||||| ||||||||| ||| Sbjct: 375 ccggccatggcaagg-agatctgggtgttcgacgtcgatgagaccgccctctccaccctg 433 Query: 450 ccctactacgccaagcacggct 471 |||||| | |||||||| |||| Sbjct: 434 ccctaccaggccaagcatggct 455 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 561 tcggcatcaagccggtgttcctgaccgaccgcaccgaggaccag 604
>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full insert sequence Length = 1081 Score = 67.9 bits (34), Expect = 4e-08 Identities = 116/142 (81%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| |||||| |||| |||||| ||||||||| ||| Sbjct: 375 ccggccatggcaagg-agatctgggtgttcgacgtcgatgagaccgccctctccaccctg 433 Query: 450 ccctactacgccaagcacggct 471 |||||| | |||||||| |||| Sbjct: 434 ccctaccaggccaagcatggct 455 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 561 tcggcatcaagccggtgttcctgaccgaccgcaccgaggaccag 604
>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full insert sequence Length = 1081 Score = 67.9 bits (34), Expect = 4e-08 Identities = 116/142 (81%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| |||||| |||| |||||| ||||||||| ||| Sbjct: 375 ccggccatggcaagg-agatctgggtgttcgacgtcgatgagaccgccctctccaccctg 433 Query: 450 ccctactacgccaagcacggct 471 |||||| | |||||||| |||| Sbjct: 434 ccctaccaggccaagcatggct 455 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 561 tcggcatcaagccggtgttcctgaccgaccgcaccgaggaccag 604
>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full insert sequence Length = 1081 Score = 67.9 bits (34), Expect = 4e-08 Identities = 116/142 (81%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| |||||| |||| |||||| ||||||||| ||| Sbjct: 375 ccggccatggcaagg-agatctgggtgttcgacgtcgatgagaccgccctctccaccctg 433 Query: 450 ccctactacgccaagcacggct 471 |||||| | |||||||| |||| Sbjct: 434 ccctaccaggccaagcatggct 455 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 561 tcggcatcaagccggtgttcctgaccgaccgcaccgaggaccag 604
>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full insert sequence Length = 1096 Score = 67.9 bits (34), Expect = 4e-08 Identities = 116/142 (81%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| |||||| |||| |||||| ||||||||| ||| Sbjct: 375 ccggccatggcaagg-agatctgggtgttcgacgtcgatgagaccgccctctccaccctg 433 Query: 450 ccctactacgccaagcacggct 471 |||||| | |||||||| |||| Sbjct: 434 ccctaccaggccaagcatggct 455 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 561 tcggcatcaagccggtgttcctgaccgaccgcaccgaggaccag 604
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 67.9 bits (34), Expect = 4e-08 Identities = 116/142 (81%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 26144 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 26085 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctccaacctc 449 ||||| | ||||||| || ||||||| |||||| |||| |||||| ||||||||| ||| Sbjct: 26084 ccggccatggcaagg-agatctgggtgttcgacgtcgatgagaccgccctctccaccctg 26026 Query: 450 ccctactacgccaagcacggct 471 |||||| | |||||||| |||| Sbjct: 26025 ccctaccaggccaagcatggct 26004 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 25763 tcggcatcaagccggtgttcctgaccgaccgcaccgaggaccag 25720
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 411 tgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgcc 461 ||||| |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 2088139 tgggtgttcgacgtcgacgagacgctcctctccaacctcccctactacgcc 2088189
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 411 tgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgcc 461 ||||| |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 109001 tgggtgttcgacgtcgacgagacgctcctctccaacctcccctactacgcc 109051
>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full insert sequence Length = 1100 Score = 61.9 bits (31), Expect = 2e-06 Identities = 95/115 (82%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 291 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 350 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctcca 444 |||||| ||||||| |||||||||| |||||| ||||||||||| | ||||||| Sbjct: 351 ccggcagtggcaagg-aggtctgggtgttcgacgtcgacgagaccgcactctcca 404 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 537 tcggcatcaagccggtgttcctaaccgaccgcaccgaggaccag 580
>dbj|AK058604.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A01, full insert sequence Length = 1313 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 411 tgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgcc 461 ||||| |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 622 tgggtgttcgacgtcgacgagacgctcctctccaacctcccctactacgcc 672
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 61.9 bits (31), Expect = 2e-06 Identities = 95/115 (82%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 330 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctca 389 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 7904 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 7845 Query: 390 ccggcaacggcaaggcaggtctgggtcttcgacatcgacgagaccaccctctcca 444 |||||| ||||||| |||||||||| |||||| ||||||||||| | ||||||| Sbjct: 7844 ccggcagtggcaagg-aggtctgggtgttcgacgtcgacgagaccgcactctcca 7791 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 tcggcgtcaagccggtgttcctcaccggccggactgaggaccag 619 ||||| |||||||||||||||| |||| ||| || ||||||||| Sbjct: 6903 tcggcatcaagccggtgttcctaaccgaccgcaccgaggaccag 6860 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 265 ctggaagacggtgcccgcgagctgcgagggctacgtcg 302 ||||||||||||||| |||| ||||| |||||||||| Sbjct: 18755 ctggaagacggtgccggcgaactgcgctggctacgtcg 18718
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 156 tggtggcgccgctgatccacgcgctgcggccgc 188 ||||||||||||||||| ||||||||| ||||| Sbjct: 1077692 tggtggcgccgctgatcgacgcgctgctgccgc 1077724
>ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 520 aggggagcgcgccagccctgccggagacgaagcggctgtac 560 ||||||||||||| || ||||||||||||| ||| |||||| Sbjct: 56 aggggagcgcgccggcgctgccggagacgaggcgcctgtac 96
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 520 aggggagcgcgccagccctgccggagacgaagcggctgtac 560 ||||||||||||| || ||||||||||||| ||| |||||| Sbjct: 16055497 aggggagcgcgccggcgctgccggagacgaggcgcctgtac 16055537 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggcggtggtggcgccgctgatccacgcgc 179 |||||||| ||||||||||||| |||||| Sbjct: 15937457 ggcggtggcggcgccgctgatcgacgcgc 15937485
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 520 aggggagcgcgccagccctgccggagacgaagcggctgtac 560 ||||||||||||| || ||||||||||||| ||| |||||| Sbjct: 25830 aggggagcgcgccggcgctgccggagacgaggcgcctgtac 25870
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 520 aggggagcgcgccagccctgccggagacgaagcggctgtac 560 ||||||||||||| || ||||||||||||| ||| |||||| Sbjct: 136899 aggggagcgcgccggcgctgccggagacgaggcgcctgtac 136939 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggcggtggtggcgccgctgatccacgcgc 179 |||||||| ||||||||||||| |||||| Sbjct: 18859 ggcggtggcggcgccgctgatcgacgcgc 18887
>ref|XM_473513.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 438 ctctccaacctcccctactacgcc 461 |||||||||||||||||||||||| Sbjct: 31 ctctccaacctcccctactacgcc 54
>ref|NM_183670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 195 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 438 ctctccaacctcccctactacgcc 461 |||||||||||||||||||||||| Sbjct: 31 ctctccaacctcccctactacgcc 54
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 438 ctctccaacctcccctactacgcc 461 |||||||||||||||||||||||| Sbjct: 28254146 ctctccaacctcccctactacgcc 28254169
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 438 ctctccaacctcccctactacgcc 461 |||||||||||||||||||||||| Sbjct: 10940680 ctctccaacctcccctactacgcc 10940657 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 410 ctgggtcttcgacatcgacgagaccaccctctcc 443 |||||| |||||| ||||||||||| |||||||| Sbjct: 4872197 ctgggtgttcgacgtcgacgagaccgccctctcc 4872164 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gccgacgtcggcggcggacg 143 |||||||||||||||||||| Sbjct: 9253184 gccgacgtcggcggcggacg 9253165 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgaggcggtggtggcgccgc 167 |||||||||||||||||||| Sbjct: 7627981 cgaggcggtggtggcgccgc 7628000
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 438 ctctccaacctcccctactacgcc 461 |||||||||||||||||||||||| Sbjct: 127696 ctctccaacctcccctactacgcc 127673
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 438 ctctccaacctcccctactacgcc 461 |||||||||||||||||||||||| Sbjct: 43522 ctctccaacctcccctactacgcc 43499
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 438 ctctccaacctcccctactacgcc 461 |||||||||||||||||||||||| Sbjct: 46454 ctctccaacctcccctactacgcc 46477
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 152 gcggtggtggcgccgctgatcca 174 ||||||||||||||||||||||| Sbjct: 141389 gcggtggtggcgccgctgatcca 141367
>ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 410 ctgggtcttcgacatcgacgagaccaccctctcc 443 |||||| |||||| ||||||||||| |||||||| Sbjct: 375 ctgggtgttcgacgtcgacgagaccgccctctcc 408
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 410 ctgggtcttcgacatcgacgagaccaccctctcc 443 |||||| |||||| ||||||||||| |||||||| Sbjct: 116846 ctgggtgttcgacgtcgacgagaccgccctctcc 116813
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 410 ctgggtcttcgacatcgacgagaccaccctctcc 443 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full insert sequence Length = 1094 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 410 ctgggtcttcgacatcgacgagaccaccctctcc 443 |||||| |||||| ||||||||||| |||||||| Sbjct: 397 ctgggtgttcgacgtcgacgagaccgccctctcc 430
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 410 ctgggtcttcgacatcgacgagaccaccctctcc 443 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full insert sequence Length = 1308 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 410 ctgggtcttcgacatcgacgagaccaccctctcc 443 |||||| |||||| ||||||||||| |||||||| Sbjct: 611 ctgggtgttcgacgtcgacgagaccgccctctcc 644
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 410 ctgggtcttcgacatcgacgagaccaccctctcc 443 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full insert sequence Length = 1114 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 410 ctgggtcttcgacatcgacgagaccaccctctcc 443 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 178 gctgcggccgctgctgggctccggcaagca 207 |||||||||||||||||||| || |||||| Sbjct: 1858796 gctgcggccgctgctgggcttcgacaagca 1858825 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 124 gccgacgtcggcggcggacgtg 145 |||||||||||||||||||||| Sbjct: 90574 gccgacgtcggcggcggacgtg 90595
>ref|XM_477962.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggcggtggtggcgccgctgatccacgcgc 179 |||||||| ||||||||||||| |||||| Sbjct: 57 ggcggtggcggcgccgctgatcgacgcgc 85
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 ctgcggccgctgctgggctccggca 203 |||||||||||||||||||| |||| Sbjct: 4476736 ctgcggccgctgctgggctcgggca 4476712 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 tcaagctcaccggcaacggcaagg 404 ||||||||||||||| |||||||| Sbjct: 4786308 tcaagctcaccggcaccggcaagg 4786285
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 gcgctgcggccgctgctgggctccg 200 ||||||||||||||||||| ||||| Sbjct: 966839 gcgctgcggccgctgctggactccg 966815
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ccacgcgctgcggccgctgct 192 ||||||||||||||||||||| Sbjct: 7463181 ccacgcgctgcggccgctgct 7463201
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gcggcggacgtggacgaggcg 154 ||||||||||||||||||||| Sbjct: 4785906 gcggcggacgtggacgaggcg 4785886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 caacgcgaccagcttcaacg 507 |||||||||||||||||||| Sbjct: 768764 caacgcgaccagcttcaacg 768783
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13 Length = 179669 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggcggtggtggcgccgctgatccacgcgc 179 |||||||| ||||||||||||| |||||| Sbjct: 176971 ggcggtggcggcgccgctgatcgacgcgc 176999
>dbj|AK112061.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-G08, full insert sequence Length = 903 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 ggcggtggtggcgccgctgatccacgcgc 179 |||||||| ||||||||||||| |||||| Sbjct: 123 ggcggtggcggcgccgctgatcgacgcgc 151
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 tcgactccctcaagctcaccg 392 ||||||||||||||||||||| Sbjct: 380245 tcgactccctcaagctcaccg 380265
>ref|XM_508594.1| PREDICTED: Pan troglodytes similar to KIAA1394 protein (LOC451368), mRNA Length = 4191 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gacgaggcggtggtggcgccgctg 169 ||||||||||||| |||||||||| Sbjct: 1987 gacgaggcggtggcggcgccgctg 2010
>ref|NM_188032.1| Oryza sativa (japonica cultivar-group), Ozsa8452 predicted mRNA Length = 1767 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gccgacgtcggcggcggacg 143 |||||||||||||||||||| Sbjct: 1617 gccgacgtcggcggcggacg 1636
>ref|NM_188686.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 369 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgaggcggtggtggcgccgc 167 |||||||||||||||||||| Sbjct: 304 cgaggcggtggtggcgccgc 285
>ref|XM_482470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcggtggtggcg 163 |||||| ||||||||||| |||||||| |||| Sbjct: 275 cggcggaggacgtggacgcggcggtggcggcg 306
>ref|XM_470115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1860 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 ctcctcctcgtcgccgcagctctcctcgcggc 90 |||||||||||| |||| || ||||||||||| Sbjct: 108 ctcctcctcgtctccgccgcgctcctcgcggc 139
>ref|XM_469899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3159 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtcggcggcggacgtggac 148 |||||||||||||||||||| Sbjct: 395 cgtcggcggcggacgtggac 414
>ref|NM_196414.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0060A14.4), mRNA Length = 537 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcgg 155 ||||||||| |||||||||||||| Sbjct: 86 cggcggcggtcgtggacgaggcgg 109
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 ccgctgatccacgcgctgcggccg 187 ||||||||||||||||||| |||| Sbjct: 106983 ccgctgatccacgcgctgccgccg 107006
>ref|NM_174413.2| Bos taurus proprotein convertase subtilisin/kexin type 2 (PCSK2), mRNA Length = 2092 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ggactggaagacggtgcccg 281 |||||||||||||||||||| Sbjct: 1459 ggactggaagacggtgcccg 1478
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cgccgcagctctcctcgcgg 89 |||||||||||||||||||| Sbjct: 529452 cgccgcagctctcctcgcgg 529471
>gb|AY492273.1| Corynebacterium vitaeruminis strain CIP 827 RpoB (rpoB) gene, partial cds Length = 3296 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcacgccggagtggcgtgcg 224 |||||||||||||||||||| Sbjct: 127 gcacgccggagtggcgtgcg 146
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcctcctcgtcgccgcagc 78 |||||||||||||||||||| Sbjct: 2526152 ctcctcctcgtcgccgcagc 2526171
>ref|XM_368159.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01085.4) partial mRNA Length = 747 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 gagcgcgccagccctgccgg 543 |||||||||||||||||||| Sbjct: 450 gagcgcgccagccctgccgg 431
>gb|AY658948.1| Synthetic construct Peudomonas aeruginosa clone FLH046900.01F PA1060 gene, partial cds Length = 906 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 cacgcgctgcggccgctgctgggc 196 ||||||| |||||||||||||||| Sbjct: 439 cacgcgccgcggccgctgctgggc 462
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 ctcctcctcgtcgccgcagctctcctcgcggc 90 |||||||||||| |||| || ||||||||||| Sbjct: 34030982 ctcctcctcgtctccgccgcgctcctcgcggc 34031013 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtcggcggcggacgtggac 148 |||||||||||||||||||| Sbjct: 31415004 cgtcggcggcggacgtggac 31415023
>ref|XM_756140.1| Ustilago maydis 521 hypothetical protein (UM05086.1) partial mRNA Length = 5505 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ggcggtggtggcgccgctga 170 |||||||||||||||||||| Sbjct: 2532 ggcggtggtggcgccgctga 2513
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcgg 155 ||||||||| |||||||||||||| Sbjct: 171752 cggcggcggtcgtggacgaggcgg 171775
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cgtcggcggcggacgtggac 148 |||||||||||||||||||| Sbjct: 80796 cgtcggcggcggacgtggac 80777
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cggcggcggacgtggacgaggcgg 155 ||||||||| |||||||||||||| Sbjct: 4790 cggcggcggtcgtggacgaggcgg 4767
>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8 Length = 197698 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 ggacgtggacgaggcggtggtggc 162 |||||||| ||||||||||||||| Sbjct: 4142 ggacgtggtcgaggcggtggtggc 4119
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cggcagccatttccgccgcg 335 |||||||||||||||||||| Sbjct: 13266 cggcagccatttccgccgcg 13285
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 actccaaggtcgtcatcgac 355 |||||||||||||||||||| Sbjct: 68883 actccaaggtcgtcatcgac 68902
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 gtcgtcatcgaccaggccctcgcc 367 |||||||||||| ||||||||||| Sbjct: 195232 gtcgtcatcgacaaggccctcgcc 195255
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gacgacgctcctcctcgtcgccgc 75 |||| ||||||||||||||||||| Sbjct: 156475 gacgccgctcctcctcgtcgccgc 156452
>dbj|AK127616.1| Homo sapiens cDNA FLJ45714 fis, clone FEKID2002637, highly similar to Serine/threonine protein phosphatase PP1-alpha 1 catalytic subunit (EC 3.1.3.16) Length = 1685 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gacgaggcggtggtggcgccgctg 169 ||||||||||||| |||||||||| Sbjct: 111 gacgaggcggtggcggcgccgctg 88
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cgctgcggccgctgctgggc 196 |||||||||||||||||||| Sbjct: 1724968 cgctgcggccgctgctgggc 1724987 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 catgccgacgtcggcggcgg 140 |||||||||||||||||||| Sbjct: 27426 catgccgacgtcggcggcgg 27407
>ref|XM_941962.1| PREDICTED: Homo sapiens KIAA1394 protein, transcript variant 3 (KIAA1394), mRNA Length = 5056 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gacgaggcggtggtggcgccgctg 169 ||||||||||||| |||||||||| Sbjct: 2682 gacgaggcggtggcggcgccgctg 2705
>ref|XM_208522.5| PREDICTED: Homo sapiens KIAA1394 protein, transcript variant 1 (KIAA1394), mRNA Length = 5055 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gacgaggcggtggtggcgccgctg 169 ||||||||||||| |||||||||| Sbjct: 2682 gacgaggcggtggcggcgccgctg 2705
>gb|AC008934.5| Homo sapiens chromosome 5 clone CITB-H1_2301A11, complete sequence Length = 135800 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 ccaacctcccctactacgccaagc 465 |||||||||||||| ||||||||| Sbjct: 58565 ccaacctcccctaccacgccaagc 58542
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggacgaggcggtggtggcgc 164 |||||||||||||||||||| Sbjct: 125683 ggacgaggcggtggtggcgc 125664
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcgg 155 ||||||||| |||||||||||||| Sbjct: 17880 cggcggcggtcgtggacgaggcgg 17903
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 cggtggtggcgccgctgatccacg 176 ||||||||||| |||||||||||| Sbjct: 429845 cggtggtggcggcgctgatccacg 429822
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcgg 155 |||||||||||||||||| ||||| Sbjct: 66182 cggcggcggacgtggacgcggcgg 66205
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcgg 155 ||||||||| |||||||||||||| Sbjct: 13325503 cggcggcggtcgtggacgaggcgg 13325526
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcggtggtggcg 163 |||||| ||||||||||| |||||||| |||| Sbjct: 20372954 cggcggaggacgtggacgcggcggtggcggcg 20372985
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 ctcctcctcgtcgccgcagctctcctcgcggc 90 |||||||||||| |||| || ||||||||||| Sbjct: 34121454 ctcctcctcgtctccgccgcgctcctcgcggc 34121485 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgtcggcggcggacgtggac 148 |||||||||||||||||||| Sbjct: 31505520 cgtcggcggcggacgtggac 31505539
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 59 ctcctcctcgtcgccgcagctctcctcgcggc 90 |||||||||||| |||| || ||||||||||| Sbjct: 26709 ctcctcctcgtctccgccgcgctcctcgcggc 26678
>gb|AF186406.1|AF186406 Bos taurus prohormone convertase 2 (PC2) mRNA, complete cds Length = 2092 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ggactggaagacggtgcccg 281 |||||||||||||||||||| Sbjct: 1459 ggactggaagacggtgcccg 1478
>gb|AE004950.1| Pseudomonas aeruginosa PAO1, section 511 of 529 of the complete genome Length = 11213 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cgcgctgcggccgctgctgg 194 |||||||||||||||||||| Sbjct: 5973 cgcgctgcggccgctgctgg 5954
>gb|AE004505.1| Pseudomonas aeruginosa PAO1, section 66 of 529 of the complete genome Length = 11421 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gccgctgatccacgcgctgc 182 |||||||||||||||||||| Sbjct: 511 gccgctgatccacgcgctgc 530
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgaggcggtggtggcgccgc 167 |||||||||||||||||||| Sbjct: 38557 cgaggcggtggtggcgccgc 38576
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gccgacgtcggcggcggacg 143 |||||||||||||||||||| Sbjct: 29778 gccgacgtcggcggcggacg 29759
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gccgacgtcggcggcggacg 143 |||||||||||||||||||| Sbjct: 153566 gccgacgtcggcggcggacg 153547
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gctcaccggcaacggcaagg 404 |||||||||||||||||||| Sbjct: 5345914 gctcaccggcaacggcaagg 5345895
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcggtggtggcg 163 |||||| ||||||||||| |||||||| |||| Sbjct: 120702 cggcggaggacgtggacgcggcggtggcggcg 120733
>emb|X87247.1|PVULSGENE Pseudorabies virus UL21, UL20 & UL19 genes Length = 3797 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcgg 155 |||||||||||||||||| ||||| Sbjct: 2450 cggcggcggacgtggacgcggcgg 2473
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcggtggtggcg 163 |||||| ||||||||||| |||||||| |||| Sbjct: 3584 cggcggaggacgtggacgcggcggtggcggcg 3615
>dbj|AK121701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073G17, full insert sequence Length = 2041 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 ctcctcctcgtcgccgcagctctcctcgcggc 90 |||||||||||| |||| || ||||||||||| Sbjct: 114 ctcctcctcgtctccgccgcgctcctcgcggc 145
>dbj|AK109991.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-E07, full insert sequence Length = 3419 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggacgaggcggtggtggcgc 164 |||||||||||||||||||| Sbjct: 2514 ggacgaggcggtggtggcgc 2533
>dbj|AK071221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C02, full insert sequence Length = 1807 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcggtggtggcg 163 |||||| ||||||||||| |||||||| |||| Sbjct: 275 cggcggaggacgtggacgcggcggtggcggcg 306
>dbj|AK064366.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-C03, full insert sequence Length = 1540 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 ctcctcctcgtcgccgcagctctcctcgcggc 90 |||||||||||| |||| || ||||||||||| Sbjct: 77 ctcctcctcgtctccgccgcgctcctcgcggc 108
>dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-1337H24, complete sequence Length = 168565 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gacgaggcggtggtggcgccgctg 169 ||||||||||||| |||||||||| Sbjct: 101538 gacgaggcggtggcggcgccgctg 101561
>dbj|AB096083.1| Oryza sativa (japonica cultivar-group) BADH2 mRNA for betaine aldehyde dehydrogenase, complete cds Length = 1512 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcggtggtggcg 163 |||||| ||||||||||| |||||||| |||| Sbjct: 128 cggcggaggacgtggacgcggcggtggcggcg 159
>dbj|AP001359.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-820L6, complete sequences Length = 221535 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 385 gctcaccggcaacggcaaggcagg 408 |||||||||||| ||||||||||| Sbjct: 137405 gctcaccggcaaaggcaaggcagg 137382
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcgg 155 ||||||||| |||||||||||||| Sbjct: 13332843 cggcggcggtcgtggacgaggcgg 13332866
>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete sequence Length = 209214 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cagctgggtgctgggggtgg 245 |||||||||||||||||||| Sbjct: 36203 cagctgggtgctgggggtgg 36184
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 ggacgtggacgaggcggtggtggc 162 |||||||| ||||||||||||||| Sbjct: 1558061 ggacgtggccgaggcggtggtggc 1558084
>gb|L37531.1|STMPGLYZ Streptomyces coelicolor bacteriophage (phiC31) resistance (pglY and pglZ) genes, complete cds's Length = 9461 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 gtcgtcatcgaccaggccctcgcc 367 |||||||||||| ||||||||||| Sbjct: 2919 gtcgtcatcgacaaggccctcgcc 2942
>gb|L00676.1|SH1ULGNS Pseudorabies virus (Suid herpesvirus 1) UL18 through UL21 genes, complete cds and UL15 gene, 3' end Length = 9382 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cggcggcggacgtggacgaggcgg 155 |||||||||||||||||| ||||| Sbjct: 2450 cggcggcggacgtggacgcggcgg 2473
>gb|M95285.1|SH1UL2XA Suid herpesvirus 1 genes homologous to HSV1 UL20 and UL21 genes, complete cds; and major capsid protein gene, 3' end Length = 2510 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cggcggcggacgtggacgaggcgg 155 |||||||||||||||||| ||||| Sbjct: 730 cggcggcggacgtggacgcggcgg 707
>dbj|AB037815.1| Homo sapiens mRNA for KIAA1394 protein, partial cds Length = 5065 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gacgaggcggtggtggcgccgctg 169 ||||||||||||| |||||||||| Sbjct: 2688 gacgaggcggtggcggcgccgctg 2711 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,330,518 Number of Sequences: 3902068 Number of extensions: 3330518 Number of successful extensions: 81031 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77822 Number of HSP's gapped (non-prelim): 3170 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
