ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49d04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 490 bits (247), Expect = e-135 Identities = 432/494 (87%) Strand = Plus / Plus Query: 125 ggggaggtcatcttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatcc 184 ||||||||||||||||||||||| |||||||||||||||||| | || |||||||| || Sbjct: 79 ggggaggtcatcttcgaggagcgcttcgaagatggttgggagtcccgctgggtgaagtct 138 Query: 185 gattggaaaaggagcgaagggaaagccggtacattctagcacacggcagggaaatattct 244 |||||||||||||||||||||||||| || || ||| | ||||||||||| | ||||||| Sbjct: 139 gattggaaaaggagcgaagggaaagctggaacgttcaaacacacggcaggaagatattct 198 Query: 245 ggggatcctgatgacaaaggcattcaaacaacgatagatgctaggcattttgccatctca 304 || ||||||||||||||||| || || |||||| | || || ||||||||||| || || Sbjct: 199 ggagatcctgatgacaaaggtatacagacaacgttggacgccaggcattttgctatatcg 258 Query: 305 gccaagataccggagttcagtaacaagggccgaacattggtggtccagtactccataaag 364 |||||||| || || ||||||||||||||||| |||||||| ||||||| ||||||||| Sbjct: 259 gccaagatccccgaattcagtaacaagggccgtacattggtactccagtattccataaag 318 Query: 365 tttgagcaggaaattgaatgtggcggcggctatattaagccaatgtctggttatgtcaat 424 ||||||||||| ||||||||||| || || |||||||| | ||||||||||||||||| Sbjct: 319 tttgagcaggatattgaatgtggtggtggatatattaaacttatgtctggttatgtcaac 378 Query: 425 cagaagaaatatagtggagacactccatacagcttgatgtttgggccagatatatgcggg 484 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 379 cagaagaaatttagtggagacactccatacagcttaatgtttgggccagatatatgcgga 438 Query: 485 actcaaacaaagaagctgcatcttatactctcttaccaggggcagaactatcctatncaa 544 |||||||| |||||||| ||||||||||| ||||| || ||||||||||| ||||| | Sbjct: 439 actcaaacgaagaagctccatcttatactttcttatcaagggcagaactaccctatcaag 498 Query: 545 aaagatctacaatgcgaaaccgacaggctcacgcatgtttacacattcattcttaggccc 604 |||||||| ||||| ||||| |||| | | |||||||||||||||||||| || ||||| Sbjct: 499 aaagatctgcaatgtgaaacagacaagttgacgcatgtttacacattcatactaaggcct 558 Query: 605 gatgcatcttatag 618 ||||| || ||||| Sbjct: 559 gatgcgtcctatag 572
>dbj|AK099626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055B02, full insert sequence Length = 1784 Score = 490 bits (247), Expect = e-135 Identities = 432/494 (87%) Strand = Plus / Plus Query: 125 ggggaggtcatcttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatcc 184 ||||||||||||||||||||||| |||||||||||||||||| | || |||||||| || Sbjct: 134 ggggaggtcatcttcgaggagcgcttcgaagatggttgggagtcccgctgggtgaagtct 193 Query: 185 gattggaaaaggagcgaagggaaagccggtacattctagcacacggcagggaaatattct 244 |||||||||||||||||||||||||| || || ||| | ||||||||||| | ||||||| Sbjct: 194 gattggaaaaggagcgaagggaaagctggaacgttcaaacacacggcaggaagatattct 253 Query: 245 ggggatcctgatgacaaaggcattcaaacaacgatagatgctaggcattttgccatctca 304 || ||||||||||||||||| || || |||||| | || || ||||||||||| || || Sbjct: 254 ggagatcctgatgacaaaggtatacagacaacgttggacgccaggcattttgctatatcg 313 Query: 305 gccaagataccggagttcagtaacaagggccgaacattggtggtccagtactccataaag 364 |||||||| || || ||||||||||||||||| |||||||| ||||||| ||||||||| Sbjct: 314 gccaagatccccgaattcagtaacaagggccgtacattggtactccagtattccataaag 373 Query: 365 tttgagcaggaaattgaatgtggcggcggctatattaagccaatgtctggttatgtcaat 424 ||||||||||| ||||||||||| || || |||||||| | ||||||||||||||||| Sbjct: 374 tttgagcaggatattgaatgtggtggtggatatattaaacttatgtctggttatgtcaac 433 Query: 425 cagaagaaatatagtggagacactccatacagcttgatgtttgggccagatatatgcggg 484 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 434 cagaagaaatttagtggagacactccatacagcttaatgtttgggccagatatatgcgga 493 Query: 485 actcaaacaaagaagctgcatcttatactctcttaccaggggcagaactatcctatncaa 544 |||||||| |||||||| ||||||||||| ||||| || ||||||||||| ||||| | Sbjct: 494 actcaaacgaagaagctccatcttatactttcttatcaagggcagaactaccctatcaag 553 Query: 545 aaagatctacaatgcgaaaccgacaggctcacgcatgtttacacattcattcttaggccc 604 |||||||| ||||| ||||| |||| | | |||||||||||||||||||| || ||||| Sbjct: 554 aaagatctgcaatgtgaaacagacaagttgacgcatgtttacacattcatactaaggcct 613 Query: 605 gatgcatcttatag 618 ||||| || ||||| Sbjct: 614 gatgcgtcctatag 627
>gb|AY105822.1| Zea mays PCO122996 mRNA sequence Length = 1660 Score = 468 bits (236), Expect = e-128 Identities = 427/491 (86%) Strand = Plus / Plus Query: 128 gaggtcatcttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatccgat 187 |||||| ||||||||||||| |||||||||||||||||||| || |||||| ||||||| Sbjct: 152 gaggtcgtcttcgaggagcgcttcgaagatggttgggagactcggtgggtggaatccgac 211 Query: 188 tggaaaaggagcgaagggaaagccggtacattctagcacacggcagggaaatattctggg 247 ||||||||||| ||||||||||| || | ||| ||||||| || |||| ||| |||| Sbjct: 212 tggaaaaggagtgaagggaaagcaggaaggttcaagcacacagcggggagatactctgca 271 Query: 248 gatcctgatgacaaaggcattcaaacaacgatagatgctaggcattttgccatctcagcc 307 ||||||||||||||||| || |||||||| |||||||| || |||||||| ||||||||| Sbjct: 272 gatcctgatgacaaaggaatacaaacaacaatagatgccagacattttgctatctcagcc 331 Query: 308 aagataccggagttcagtaacaagggccgaacattggtggtccagtactccataaagttt 367 ||| | ||||| |||||||||||| ||| || | ||||||||||||||||| |||||| Sbjct: 332 aagttcccggaattcagtaacaagaaccggacgcttgtggtccagtactccattaagttt 391 Query: 368 gagcaggaaattgaatgtggcggcggctatattaagccaatgtctggttatgtcaatcag 427 |||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||| ||| Sbjct: 392 gagcaggatattgaatgtggcggtggctatattaagcttatgtccggttatgtcaaccag 451 Query: 428 aagaaatatagtggagacactccatacagcttgatgtttgggccagatatatgcgggact 487 || |||| |||||| |||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 452 aaaaaatttagtggggacactccgtacagcttgatgtttggaccagatatatgtggtact 511 Query: 488 caaacaaagaagctgcatcttatactctcttaccaggggcagaactatcctatncaaaaa 547 |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 512 caaacaaagaagctccatcttatactctcttaccaggggcagaactatcccatcaaaaaa 571 Query: 548 gatctacaatgcgaaaccgacaggctcacgcatgtttacacattcattcttaggcccgat 607 |||||| |||| || || |||| | | || || || || || |||||||||||||| ||| Sbjct: 572 gatctagaatgtgagacggacaagttaacacacgtgtatactttcattcttaggcctgat 631 Query: 608 gcatcttatag 618 ||||||||||| Sbjct: 632 gcatcttatag 642
>ref|XM_475503.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1407 Score = 274 bits (138), Expect = 3e-70 Identities = 401/489 (82%) Strand = Plus / Plus Query: 131 gtcatcttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatccgattgg 190 ||||||||||||||||| ||||| |||| ||||| | | ||||||||||| || ||| Sbjct: 85 gtcatcttcgaggagcgattcgatgatgattggggaagcagatgggtgaaatctgactgg 144 Query: 191 aaaaggagcgaagggaaagccggtacattctagcacacggcagggaaatattctggggat 250 |||| |||||||||||||||||| |||||| | || || ||||||| |||||||| ||| Sbjct: 145 aaaaagagcgaagggaaagccgggacattcaaacatacagcagggagctattctggagat 204 Query: 251 cctgatgacaaaggcattcaaacaacgatagatgctaggcattttgccatctcagccaag 310 ||||| || | ||| || |||||||| ||||||| ||||||||| || || |||||| Sbjct: 205 cctgacgatagaggtatacaaacaacctcggatgctaagcattttgctatatcggccaag 264 Query: 311 ataccggagttcagtaacaagggccgaacattggtggtccagtactccataaagtttgag 370 | || || |||||||||||| ||| ||||||||||| ||||| || |||||| ||||| Sbjct: 265 ttcccagaattcagtaacaagaaccggacattggtggttcagtattcgataaagattgag 324 Query: 371 caggaaattgaatgtggcggcggctatattaagccaatgtctggttatgtcaatcagaag 430 ||||| ||||||||||| || | ||||| |||| |||||||| ||||| ||||||||| Sbjct: 325 caggatattgaatgtggtggtgcttatatcaagcttatgtctggctatgtgaatcagaag 384 Query: 431 aaatatagtggagacactccatacagcttgatgtttgggccagatatatgcgggactcaa 490 |||| | | || |||||||| || ||||| ||||||||||| |||||||| || ||| Sbjct: 385 aaatttggcggtgacactccttatagcttcatgtttgggcctgatatatgtggtgatcag 444 Query: 491 acaaagaagctgcatcttatactctcttaccaggggcagaactatcctatncaaaaagat 550 |||||||| || ||||| ||||| |||||||| ||||| ||||| ||||| | |||||| Sbjct: 445 acaaagaaactccatctgatactgtcttaccaagggcaaaactaccctataaagaaagat 504 Query: 551 ctacaatgcgaaaccgacaggctcacgcatgtttacacattcattcttaggcccgatgca 610 || |||| ||||| |||| | | || ||| |||||||||||||||||||||| ||||| Sbjct: 505 ctgaaatgtgaaactgacaagttgacacatttttacacattcattcttaggccagatgcc 564 Query: 611 tcttatagt 619 ||||||||| Sbjct: 565 tcttatagt 573
>dbj|AK060834.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C08, full insert sequence Length = 1481 Score = 204 bits (103), Expect = 2e-49 Identities = 318/390 (81%) Strand = Plus / Plus Query: 230 gcagggaaatattctggggatcctgatgacaaaggcattcaaacaacgatagatgctagg 289 ||||||| |||||||| |||||||| || | ||| || |||||||| ||||||| | Sbjct: 6 gcagggagctattctggagatcctgacgatagaggtatacaaacaacctcggatgctaag 65 Query: 290 cattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtggtc 349 |||||||| || || |||||| | || || |||||||||||| ||| ||||||||||| Sbjct: 66 cattttgctatatcggccaagttcccagaattcagtaacaagaaccggacattggtggtt 125 Query: 350 cagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagccaatg 409 ||||| || |||||| |||||||||| ||||||||||| || | ||||| |||| ||| Sbjct: 126 cagtattcgataaagattgagcaggatattgaatgtggtggtgcttatatcaagcttatg 185 Query: 410 tctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgtttggg 469 ||||| ||||| ||||||||||| | | | || |||||||| || ||||| ||||||||| Sbjct: 186 tctggctatgtgaatcagaagaagtttggcggtgacactccttatagcttcatgtttggg 245 Query: 470 ccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccaggggcag 529 || |||||||| || ||| |||||||| || ||||| ||||| |||||||| ||||| Sbjct: 246 cctgatatatgtggtgatcagacaaagaaactccatctgatactgtcttaccaagggcaa 305 Query: 530 aactatcctatncaaaaagatctacaatgcgaaaccgacaggctcacgcatgtttacaca 589 ||||| ||||| | |||||||| |||| ||||| |||| | | || ||| |||||||| Sbjct: 306 aactaccctataaagaaagatctgaaatgtgaaactgacaagttgacacatttttacaca 365 Query: 590 ttcattcttaggcccgatgcatcttatagt 619 |||||||||||||| ||||| ||||||||| Sbjct: 366 ttcattcttaggccagatgcctcttatagt 395
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 186 bits (94), Expect = 6e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 287 aggcattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtg 346 ||||||||||| || || |||||||| || || ||||||||||||||||| |||||||| Sbjct: 38926835 aggcattttgctatatcggccaagatccccgaattcagtaacaagggccgtacattggta 38926776 Query: 347 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcca 406 ||||||| |||||||||||||||||||| ||||||||||| || || |||||||| | Sbjct: 38926775 ctccagtattccataaagtttgagcaggatattgaatgtggtggtggatatattaaactt 38926716 Query: 407 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacag 456 ||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 38926715 atgtctggttatgtcaaccagaagaaatttagtggagacactccatacag 38926666 Score = 155 bits (78), Expect = 2e-34 Identities = 143/165 (86%) Strand = Plus / Minus Query: 454 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 513 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 38926461 cagcttaatgtttgggccagatatatgcggaactcaaacgaagaagctccatcttatact 38926402 Query: 514 ctcttaccaggggcagaactatcctatncaaaaagatctacaatgcgaaaccgacaggct 573 ||||| || ||||||||||| ||||| | |||||||| ||||| ||||| |||| | | Sbjct: 38926401 ttcttatcaagggcagaactaccctatcaagaaagatctgcaatgtgaaacagacaagtt 38926342 Query: 574 cacgcatgtttacacattcattcttaggcccgatgcatcttatag 618 |||||||||||||||||||| || ||||| ||||| || ||||| Sbjct: 38926341 gacgcatgtttacacattcatactaaggcctgatgcgtcctatag 38926297 Score = 117 bits (59), Expect = 5e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 154 agatggttgggagacacgttgggtgaaatccgattggaaaaggagcgaagggaaagccgg 213 ||||||||||||| | || |||||||| || |||||||||||||||||||||||||| || Sbjct: 38927100 agatggttgggagtcccgctgggtgaagtctgattggaaaaggagcgaagggaaagctgg 38927041 Query: 214 tacattctagcacacggcagggaaatattctggggatcctgatgacaaagg 264 || ||| | ||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 38927040 aacgttcaaacacacggcaggaagatattctggagatcctgatgacaaagg 38926990 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 125 ggggaggtcatcttcgaggagcggttcgaag 155 ||||||||||||||||||||||| ||||||| Sbjct: 38927879 ggggaggtcatcttcgaggagcgcttcgaag 38927849
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 186 bits (94), Expect = 6e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 287 aggcattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtg 346 ||||||||||| || || |||||||| || || ||||||||||||||||| |||||||| Sbjct: 468 aggcattttgctatatcggccaagatccccgaattcagtaacaagggccgtacattggta 409 Query: 347 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcca 406 ||||||| |||||||||||||||||||| ||||||||||| || || |||||||| | Sbjct: 408 ctccagtattccataaagtttgagcaggatattgaatgtggtggtggatatattaaactt 349 Query: 407 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacag 456 ||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 348 atgtctggttatgtcaaccagaagaaatttagtggagacactccatacag 299 Score = 117 bits (59), Expect = 5e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 154 agatggttgggagacacgttgggtgaaatccgattggaaaaggagcgaagggaaagccgg 213 ||||||||||||| | || |||||||| || |||||||||||||||||||||||||| || Sbjct: 733 agatggttgggagtcccgctgggtgaagtctgattggaaaaggagcgaagggaaagctgg 674 Query: 214 tacattctagcacacggcagggaaatattctggggatcctgatgacaaagg 264 || ||| | ||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 673 aacgttcaaacacacggcaggaagatattctggagatcctgatgacaaagg 623 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 454 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 513 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 94 cagcttaatgtttgggccagatatatgcggaactcaaacgaagaagctccatcttatact 35 Query: 514 ctcttaccaggggcagaactatcctat 540 ||||| || ||||||||||| ||||| Sbjct: 34 ttcttatcaagggcagaactaccctat 8 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 125 ggggaggtcatcttcgaggagcggttcgaag 155 ||||||||||||||||||||||| ||||||| Sbjct: 1512 ggggaggtcatcttcgaggagcgcttcgaag 1482
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 186 bits (94), Expect = 6e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 287 aggcattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtg 346 ||||||||||| || || |||||||| || || ||||||||||||||||| |||||||| Sbjct: 91621 aggcattttgctatatcggccaagatccccgaattcagtaacaagggccgtacattggta 91562 Query: 347 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcca 406 ||||||| |||||||||||||||||||| ||||||||||| || || |||||||| | Sbjct: 91561 ctccagtattccataaagtttgagcaggatattgaatgtggtggtggatatattaaactt 91502 Query: 407 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacag 456 ||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 91501 atgtctggttatgtcaaccagaagaaatttagtggagacactccatacag 91452 Score = 155 bits (78), Expect = 2e-34 Identities = 143/165 (86%) Strand = Plus / Minus Query: 454 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 513 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 91247 cagcttaatgtttgggccagatatatgcggaactcaaacgaagaagctccatcttatact 91188 Query: 514 ctcttaccaggggcagaactatcctatncaaaaagatctacaatgcgaaaccgacaggct 573 ||||| || ||||||||||| ||||| | |||||||| ||||| ||||| |||| | | Sbjct: 91187 ttcttatcaagggcagaactaccctatcaagaaagatctgcaatgtgaaacagacaagtt 91128 Query: 574 cacgcatgtttacacattcattcttaggcccgatgcatcttatag 618 |||||||||||||||||||| || ||||| ||||| || ||||| Sbjct: 91127 gacgcatgtttacacattcatactaaggcctgatgcgtcctatag 91083 Score = 117 bits (59), Expect = 5e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 154 agatggttgggagacacgttgggtgaaatccgattggaaaaggagcgaagggaaagccgg 213 ||||||||||||| | || |||||||| || |||||||||||||||||||||||||| || Sbjct: 91886 agatggttgggagtcccgctgggtgaagtctgattggaaaaggagcgaagggaaagctgg 91827 Query: 214 tacattctagcacacggcagggaaatattctggggatcctgatgacaaagg 264 || ||| | ||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 91826 aacgttcaaacacacggcaggaagatattctggagatcctgatgacaaagg 91776 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 125 ggggaggtcatcttcgaggagcggttcgaag 155 ||||||||||||||||||||||| ||||||| Sbjct: 92665 ggggaggtcatcttcgaggagcgcttcgaag 92635
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 155 bits (78), Expect = 2e-34 Identities = 143/165 (86%) Strand = Plus / Minus Query: 454 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 513 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 199343 cagcttaatgtttgggccagatatatgcggaactcaaacgaagaagctccatcttatact 199284 Query: 514 ctcttaccaggggcagaactatcctatncaaaaagatctacaatgcgaaaccgacaggct 573 ||||| || ||||||||||| ||||| | |||||||| ||||| ||||| |||| | | Sbjct: 199283 ttcttatcaagggcagaactaccctatcaagaaagatctgcaatgtgaaacagacaagtt 199224 Query: 574 cacgcatgtttacacattcattcttaggcccgatgcatcttatag 618 |||||||||||||||||||| || ||||| ||||| || ||||| Sbjct: 199223 gacgcatgtttacacattcatactaaggcctgatgcgtcctatag 199179
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 109 bits (55), Expect = 1e-20 Identities = 138/166 (83%) Strand = Plus / Plus Query: 454 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 513 |||||| ||||||||||| |||||||| || ||| |||||||| || ||||| ||||| Sbjct: 42774 cagcttcatgtttgggcctgatatatgtggtgatcagacaaagaaactccatctgatact 42833 Query: 514 ctcttaccaggggcagaactatcctatncaaaaagatctacaatgcgaaaccgacaggct 573 |||||||| ||||| ||||| ||||| | |||||||| |||| ||||| |||| | | Sbjct: 42834 gtcttaccaagggcaaaactaccctataaagaaagatctgaaatgtgaaactgacaagtt 42893 Query: 574 cacgcatgtttacacattcattcttaggcccgatgcatcttatagt 619 || ||| |||||||||||||||||||||| ||||| ||||||||| Sbjct: 42894 gacacatttttacacattcattcttaggccagatgcctcttatagt 42939 Score = 107 bits (54), Expect = 4e-20 Identities = 129/154 (83%) Strand = Plus / Plus Query: 281 gatgctaggcattttgccatctcagccaagataccggagttcagtaacaagggccgaaca 340 ||||||| ||||||||| || || |||||| | || || |||||||||||| ||| ||| Sbjct: 42142 gatgctaagcattttgctatatcggccaagttcccagaattcagtaacaagaaccggaca 42201 Query: 341 ttggtggtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatatt 400 |||||||| ||||| || |||||| |||||||||| ||||||||||| || | ||||| Sbjct: 42202 ttggtggttcagtattcgataaagattgagcaggatattgaatgtggtggtgcttatatc 42261 Query: 401 aagccaatgtctggttatgtcaatcagaagaaat 434 |||| |||||||| ||||| ||||||||||||| Sbjct: 42262 aagcttatgtctggctatgtgaatcagaagaaat 42295 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 173 tgggtgaaatccgattggaaaaggagcgaagggaaagccggtacattctagcacacggca 232 ||||||||||| || ||||||| |||||||||||||||||| |||||| | || || ||| Sbjct: 41860 tgggtgaaatctgactggaaaaagagcgaagggaaagccgggacattcaaacatacagca 41919 Query: 233 gggaaatattctggggatcctga 255 |||| |||||||| |||||||| Sbjct: 41920 gggagctattctggagatcctga 41942
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 109 bits (55), Expect = 1e-20 Identities = 138/166 (83%) Strand = Plus / Plus Query: 454 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 513 |||||| ||||||||||| |||||||| || ||| |||||||| || ||||| ||||| Sbjct: 24855889 cagcttcatgtttgggcctgatatatgtggtgatcagacaaagaaactccatctgatact 24855948 Query: 514 ctcttaccaggggcagaactatcctatncaaaaagatctacaatgcgaaaccgacaggct 573 |||||||| ||||| ||||| ||||| | |||||||| |||| ||||| |||| | | Sbjct: 24855949 gtcttaccaagggcaaaactaccctataaagaaagatctgaaatgtgaaactgacaagtt 24856008 Query: 574 cacgcatgtttacacattcattcttaggcccgatgcatcttatagt 619 || ||| |||||||||||||||||||||| ||||| ||||||||| Sbjct: 24856009 gacacatttttacacattcattcttaggccagatgcctcttatagt 24856054 Score = 107 bits (54), Expect = 4e-20 Identities = 129/154 (83%) Strand = Plus / Plus Query: 281 gatgctaggcattttgccatctcagccaagataccggagttcagtaacaagggccgaaca 340 ||||||| ||||||||| || || |||||| | || || |||||||||||| ||| ||| Sbjct: 24855257 gatgctaagcattttgctatatcggccaagttcccagaattcagtaacaagaaccggaca 24855316 Query: 341 ttggtggtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatatt 400 |||||||| ||||| || |||||| |||||||||| ||||||||||| || | ||||| Sbjct: 24855317 ttggtggttcagtattcgataaagattgagcaggatattgaatgtggtggtgcttatatc 24855376 Query: 401 aagccaatgtctggttatgtcaatcagaagaaat 434 |||| |||||||| ||||| ||||||||||||| Sbjct: 24855377 aagcttatgtctggctatgtgaatcagaagaaat 24855410 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 173 tgggtgaaatccgattggaaaaggagcgaagggaaagccggtacattctagcacacggca 232 ||||||||||| || ||||||| |||||||||||||||||| |||||| | || || ||| Sbjct: 24854975 tgggtgaaatctgactggaaaaagagcgaagggaaagccgggacattcaaacatacagca 24855034 Query: 233 gggaaatattctggggatcctga 255 |||| |||||||| |||||||| Sbjct: 24855035 gggagctattctggagatcctga 24855057
>ref|NM_100718.2| Arabidopsis thaliana CRT3 (CALRETICULIN 3); calcium ion binding AT1G08450 (CRT3) transcript variant AT1G08450.1 mRNA, complete cds Length = 1469 Score = 63.9 bits (32), Expect = 6e-07 Identities = 175/223 (78%) Strand = Plus / Plus Query: 347 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcca 406 ||||||||||| | ||| |||| || || ||||||||||| || | || ||||||| Sbjct: 329 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 388 Query: 407 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 466 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 389 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 448 Query: 467 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 526 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 449 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 508 Query: 527 cagaactatcctatncaaaaagatctacaatgcgaaaccgaca 569 ||||| ||||| || |||| ||| | ||||| ||||| |||| Sbjct: 509 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 551
>gb|AY056320.1| Arabidopsis thaliana putative calreticulin protein (At1g08450) mRNA, complete cds Length = 1462 Score = 63.9 bits (32), Expect = 6e-07 Identities = 175/223 (78%) Strand = Plus / Plus Query: 347 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcca 406 ||||||||||| | ||| |||| || || ||||||||||| || | || ||||||| Sbjct: 329 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 388 Query: 407 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 466 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 389 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 448 Query: 467 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 526 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 449 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 508 Query: 527 cagaactatcctatncaaaaagatctacaatgcgaaaccgaca 569 ||||| ||||| || |||| ||| | ||||| ||||| |||| Sbjct: 509 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 551
>emb|BX815527.1|CNS0AATS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 63.9 bits (32), Expect = 6e-07 Identities = 175/223 (78%) Strand = Plus / Plus Query: 347 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcca 406 ||||||||||| | ||| |||| || || ||||||||||| || | || ||||||| Sbjct: 316 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 375 Query: 407 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 466 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 376 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 435 Query: 467 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 526 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 436 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 495 Query: 527 cagaactatcctatncaaaaagatctacaatgcgaaaccgaca 569 ||||| ||||| || |||| ||| | ||||| ||||| |||| Sbjct: 496 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 538
>gb|BT002494.1| Arabidopsis thaliana calreticulin, putative (At1g08450) mRNA, complete cds Length = 1426 Score = 63.9 bits (32), Expect = 6e-07 Identities = 175/223 (78%) Strand = Plus / Plus Query: 347 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcca 406 ||||||||||| | ||| |||| || || ||||||||||| || | || ||||||| Sbjct: 329 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 388 Query: 407 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 466 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 389 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 448 Query: 467 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 526 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 449 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 508 Query: 527 cagaactatcctatncaaaaagatctacaatgcgaaaccgaca 569 ||||| ||||| || |||| ||| | ||||| ||||| |||| Sbjct: 509 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 551
>gb|U66345.1|ATU66345 Arabidopsis thaliana calreticulin (Crt3) mRNA, complete cds Length = 1424 Score = 63.9 bits (32), Expect = 6e-07 Identities = 175/223 (78%) Strand = Plus / Plus Query: 347 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcca 406 ||||||||||| | ||| |||| || || ||||||||||| || | || ||||||| Sbjct: 326 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 385 Query: 407 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 466 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 386 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 445 Query: 467 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 526 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 446 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 505 Query: 527 cagaactatcctatncaaaaagatctacaatgcgaaaccgaca 569 ||||| ||||| || |||| ||| | ||||| ||||| |||| Sbjct: 506 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 548
>emb|BX815781.1|CNS0ACTU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 61.9 bits (31), Expect = 2e-06 Identities = 129/162 (79%) Strand = Plus / Plus Query: 408 tgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgtttg 467 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | ||||||| Sbjct: 375 tgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgtttg 434 Query: 468 ggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccaggggc 527 | |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| | Sbjct: 435 gaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcagggac 494 Query: 528 agaactatcctatncaaaaagatctacaatgcgaaaccgaca 569 |||| ||||| || |||| ||| | ||||| ||||| |||| Sbjct: 495 agaattatccaatcaaaaaggatttgcaatgtgaaacagaca 536
>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence Length = 113361 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 290 cattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtggtc 349 |||||||||||||| || |||||||| || |||||||||||| | ||||| | || || Sbjct: 105003 cattttgccatctctgcaaagataccagaattcagtaacaagaacagaacactagtcttc 105062 Query: 350 cagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagc 404 ||||| || ||||| ||||| || || ||||| ||||| || || ||||| |||| Sbjct: 105063 cagtattctataaaatttgaacaagagattgagtgtggtggaggttatatgaagc 105117
>ref|NM_001036122.1| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding AT1G56340 (CRT1) transcript variant AT1G56340.2 mRNA, complete cds Length = 1444 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 440 ggagacactccatacagcttgatgtttgggccagatat 477 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 406 ggagacactccttacagcattatgtttgggccagatat 443
>ref|NM_104513.2| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding AT1G56340 (CRT1) transcript variant AT1G56340.1 mRNA, complete cds Length = 1492 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 440 ggagacactccatacagcttgatgtttgggccagatat 477 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 406 ggagacactccttacagcattatgtttgggccagatat 443
>gb|DQ455584.1| Phaseolus vulgaris calreticulin mRNA, partial cds Length = 339 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 129 aggtcatcttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatccgatt 188 ||||| ||||||||||||| |||||||| || ||||| | || ||||| ||||| |||| Sbjct: 80 aggtcttcttcgaggagcgcttcgaagacggatgggaaaatcggtgggttaaatcagatt 139 Query: 189 ggaaaa 194 |||||| Sbjct: 140 ggaaaa 145
>gb|AF083783.1| Arabidopsis thaliana clone sps818 unknown mRNA Length = 1251 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 440 ggagacactccatacagcttgatgtttgggccagatat 477 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 382 ggagacactccttacagcattatgtttgggccagatat 419
>emb|AJ002057.1|BVMRNAC Beta vulgaris mRNA for calreticulin Length = 1564 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 135 tcttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatccgattggaa 192 |||||||||| || ||||||||||| ||||||| |||||||| ||||| || ||||| Sbjct: 102 tcttcgaggaacgtttcgaagatggatgggagaagcgttgggtcaaatctgaatggaa 159
>gb|BT008511.1| Arabidopsis thaliana At1g56340 gene, complete cds Length = 1278 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 440 ggagacactccatacagcttgatgtttgggccagatat 477 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 379 ggagacactccttacagcattatgtttgggccagatat 416
>gb|AY062628.1| Arabidopsis thaliana calreticulin (Crt1) (At1g56340; F13N6.20) mRNA, complete cds Length = 1440 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 440 ggagacactccatacagcttgatgtttgggccagatat 477 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 406 ggagacactccttacagcattatgtttgggccagatat 443
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 52.0 bits (26), Expect = 0.002 Identities = 88/109 (80%) Strand = Plus / Minus Query: 461 atgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttac 520 |||||||| |||||||||||||| || || || |||||||| ||| ||||| | || || Sbjct: 51247 atgtttggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatat 51188 Query: 521 caggggcagaactatcctatncaaaaagatctacaatgcgaaaccgaca 569 ||||| ||||| ||||| || |||| ||| | ||||| ||||| |||| Sbjct: 51187 cagggacagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 51139
>gb|U66343.1|ATU66343 Arabidopsis thaliana calreticulin (Crt1) mRNA, complete cds Length = 1463 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 440 ggagacactccatacagcttgatgtttgggccagatat 477 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 382 ggagacactccttacagcattatgtttgggccagatat 419
>dbj|AB026251.1| Lithospermum erythrorhizon mRNA for calreticulin, partial cds Length = 222 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 423 atcagaagaaatatagtggagacactccatacagcttgatgtttgggccagatatatgcg 482 |||||||||||| | |||| || ||||||||||| | |||||||| |||||||| |||| Sbjct: 107 atcagaagaaatttggtggtgatactccatacagtattatgtttggaccagatatttgcg 166 Query: 483 gg 484 || Sbjct: 167 gg 168
>gb|U74630.1|RCU74630 Ricinus communis calreticulin mRNA, complete cds Length = 1514 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 425 cagaagaaatatagtggagacactccatacagcttgatgtttgggccagatatatg 480 |||||||||| | |||| |||||||||||||| | |||||||| || |||||||| Sbjct: 364 cagaagaaatttggtggtgacactccatacagtatcatgtttggacccgatatatg 419 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 135 tcttcgaggagcggttcgaagatggttggga 165 ||||||||||||| ||||||||||| ||||| Sbjct: 74 tcttcgaggagcgtttcgaagatggatggga 104
>gb|AF083699.1| Arabidopsis thaliana clone sps206 unknown mRNA Length = 438 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 440 ggagacactccatacagcttgatgtttgggccagatat 477 |||||| |||| |||||| | ||||||||||||||||| Sbjct: 396 ggagaccctccttacagcattatgtttgggccagatat 433
>gb|AF283816.1|AF283816 Pinus taeda calreticulin mRNA, complete cds Length = 1593 Score = 44.1 bits (22), Expect = 0.54 Identities = 49/58 (84%) Strand = Plus / Plus Query: 137 ttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatccgattggaaaa 194 ||||||||||| ||||| ||| | ||||| | ||||||||| |||| |||||||||| Sbjct: 99 ttcgaggagcgtttcgatgatagctgggaaagtcgttgggtgcaatctgattggaaaa 156
>emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chromosome 4, complete sequence Length = 226754 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 436 tagtggagacactccatacagcttga 461 |||||||||||||||||| ||||||| Sbjct: 116168 tagtggagacactccataaagcttga 116143
>gb|AY336743.1| Brassica rapa subsp. pekinensis calreticulin 3 mRNA, partial cds Length = 1142 Score = 42.1 bits (21), Expect = 2.1 Identities = 63/77 (81%) Strand = Plus / Plus Query: 461 atgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttac 520 |||||||| ||||| ||||| || || || || |||||||| ||| | || || || ||| Sbjct: 415 atgtttggaccagacatatgtggaacgcagacgaagaagcttcatgtgattctttcatac 474 Query: 521 caggggcagaactatcc 537 ||||| ||||||||||| Sbjct: 475 cagggacagaactatcc 491
>emb|AL138962.16| Human DNA sequence from clone RP11-279N8 on chromosome 13 Contains two novel genes, complete sequence Length = 124518 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 365 tttgagcaggaaattgaatgt 385 ||||||||||||||||||||| Sbjct: 13918 tttgagcaggaaattgaatgt 13938
>emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor Length = 1614 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 125 ggggaggtcatcttcgaggagcggttcgaagatggttggga 165 ||||||||| ||||| ||||| |||||||||||| ||||| Sbjct: 148 ggggaggtcttcttccaggagaagttcgaagatggctggga 188
>emb|X81697.1|ATCYTACS1 A.thaliana cytACS1 mRNA for cysteine synthase Length = 1278 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 445 cactccatacagcttgatgtttggg 469 ||||||||||||||||| ||||||| Sbjct: 713 cactccatacagcttgaagtttggg 689
>gb|AC023755.14| Homo sapiens chromosome 12, clone RP11-44P17, complete sequence Length = 135689 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 cttatactctcttaccagggg 526 ||||||||||||||||||||| Sbjct: 49899 cttatactctcttaccagggg 49879
>gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, complete sequence Length = 184194 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 cttatactctcttaccagggg 526 ||||||||||||||||||||| Sbjct: 104327 cttatactctcttaccagggg 104307
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 239 tattctggggatcctgatgacaaaggcat 267 ||||||||||||||| ||||||||||||| Sbjct: 2172128 tattctggggatcct-atgacaaaggcat 2172101
>gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complete cds Length = 1545 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 125 ggggaggtcatcttcgaggagcggttcgaagatggttggga 165 ||||||||| ||||| ||||| |||||||||||| ||||| Sbjct: 150 ggggaggtcttcttccaggagaagttcgaagatggctggga 190
>gb|AY103855.1| Zea mays PCO074428 mRNA sequence Length = 1787 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 125 ggggaggtcatcttcgaggagcggttcgaagatggttggga 165 ||||||||| ||||| ||||| |||||||||||| ||||| Sbjct: 205 ggggaggtcttcttccaggagaagttcgaagatggctggga 245
>gb|AF134733.1|AF134733 Prunus armeniaca calcium-binding protein calreticulin mRNA, complete cds Length = 1524 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 423 atcagaagaaatatagtggagacactccatacagcttgatgtttgggccagatatatgcg 482 |||||||||||| | | || || || |||||||| | ||||||||||||||||| |||| Sbjct: 390 atcagaagaaatttggcggtgataccccatacagtatcatgtttgggccagatatctgcg 449 Query: 483 g 483 | Sbjct: 450 g 450
>gb|AE017044.1| Yersinia pestis biovar Mediaevails str. 91001 plasmid pCRY, complete sequence Length = 21742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gagcgaagggaaagccggta 215 |||||||||||||||||||| Sbjct: 4824 gagcgaagggaaagccggta 4843
>gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, complete sequence Length = 253738 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gatagatgctaggcattttg 296 |||||||||||||||||||| Sbjct: 187289 gatagatgctaggcattttg 187308
>gb|AY233333.1| Escherichia coli strain ECOR31 high pathogenicity island, complete sequence Length = 40365 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gagcgaagggaaagccggta 215 |||||||||||||||||||| Sbjct: 7586 gagcgaagggaaagccggta 7605
>emb|AL138727.10| Human DNA sequence from clone RP1-144O21 on chromosome 6 Contains the 5' end of the MAP3K7IP2 gene for mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (TAK1-binding protein 2)(TAB2, FLJ21885, KIAA0733) and a CpG island, complete sequence Length = 64096 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcagccgccggcggggcgac 64 |||||||||||||||||||| Sbjct: 57348 gcagccgccggcggggcgac 57329
>gb|AC027674.10| Homo sapiens chromosome 10 clone RP11-255M1, complete sequence Length = 153151 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gacaaaggcattcaaacaac 276 |||||||||||||||||||| Sbjct: 73899 gacaaaggcattcaaacaac 73918
>emb|BX511080.4| Zebrafish DNA sequence from clone DKEY-237N7 in linkage group 3, complete sequence Length = 115272 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 actcaaacaaagaagctgca 504 |||||||||||||||||||| Sbjct: 94477 actcaaacaaagaagctgca 94496
>gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, complete sequence Length = 198851 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aaaaggagcgaagggaaagc 210 |||||||||||||||||||| Sbjct: 90205 aaaaggagcgaagggaaagc 90186
>gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, complete sequence Length = 227631 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aaaaggagcgaagggaaagc 210 |||||||||||||||||||| Sbjct: 206964 aaaaggagcgaagggaaagc 206983
>gb|DQ314877.1| Homo sapiens mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (MAP3K7IP2) gene, complete cds Length = 97056 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gcagccgccggcggggcgac 64 |||||||||||||||||||| Sbjct: 1750 gcagccgccggcggggcgac 1769
>gb|U74631.1|RCU74631 Ricinus communis calreticulin gene, complete cds Length = 4975 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 425 cagaagaaatatagtggagacactccatacag 456 |||||||||| | |||| |||||||||||||| Sbjct: 2926 cagaagaaatttggtggtgacactccatacag 2957 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,099,822 Number of Sequences: 3902068 Number of extensions: 4099822 Number of successful extensions: 70734 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 70563 Number of HSP's gapped (non-prelim): 172 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
