ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49d03 |
|---|---|
| Clone Library Name | barley_pub |
>OSBL1_RAT (Q8K4M9) Oxysterol-binding protein-related protein 1 (OSBP-related| protein 1) (ORP-1) Length = 950 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/40 (45%), Positives = 28/40 (70%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ K IG ++ S +T+PVI EP+S LQ++ E ME+ Sbjct: 548 SIWSILRKCIGMEL-SKITMPVIFNEPLSFLQRLTEYMEH 586
>OSBL1_MOUSE (Q91XL9) Oxysterol-binding protein-related protein 1 (OSBP-related| protein 1) (ORP-1) Length = 950 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/40 (45%), Positives = 28/40 (70%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ K IG ++ S +T+PVI EP+S LQ++ E ME+ Sbjct: 548 SIWSILRKCIGMEL-SKITMPVIFNEPLSFLQRLTEYMEH 586
>OSBL1_HUMAN (Q9BXW6) Oxysterol-binding protein-related protein 1 (OSBP-related| protein 1) (ORP-1) Length = 950 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/40 (45%), Positives = 28/40 (70%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ K IG ++ S +T+PVI EP+S LQ++ E ME+ Sbjct: 548 SIWSILRKCIGMEL-SKITMPVIFNEPLSFLQRLTEYMEH 586
>YB35_SCHPO (O14340) Oxysterol-binding protein homolog C2F12.05c| Length = 1310 Score = 39.3 bits (90), Expect = 0.009 Identities = 20/40 (50%), Positives = 27/40 (67%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ IG D+T + TLPV EP S+LQ++AE MEY Sbjct: 937 SLWGILKGMIGKDMTKM-TLPVSFNEPTSLLQRVAEDMEY 975
>OSH2_YEAST (Q12451) Oxysterol-binding protein homolog 2| Length = 1283 Score = 38.9 bits (89), Expect = 0.011 Identities = 18/40 (45%), Positives = 27/40 (67%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ +G D+T + TLPV EP S+LQ++AE +EY Sbjct: 897 SLWAVLKSMVGKDMTRM-TLPVTFNEPTSLLQRVAEDLEY 935
>OSH1_YEAST (P35845) Oxysterol-binding protein homolog 1| Length = 1188 Score = 37.4 bits (85), Expect = 0.033 Identities = 17/38 (44%), Positives = 26/38 (68%) Frame = +1 Query: 481 WKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 W ++ +G D+T L TLPV EP S+LQ+++E +EY Sbjct: 801 WSVLKSMVGQDLTKL-TLPVSFNEPTSLLQRVSEDIEY 837
>OSBL2_MOUSE (Q8BX94) Oxysterol-binding protein-related protein 2 (OSBP-related| protein 2) (ORP-2) Length = 484 Score = 36.6 bits (83), Expect = 0.056 Identities = 16/40 (40%), Positives = 27/40 (67%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ K IG ++ S +T+P+ EP+S LQ++ E ME+ Sbjct: 75 SVWSILKKCIGLEL-SKITMPIAFNEPLSFLQRITEYMEH 113
>OSBL2_HUMAN (Q9H1P3) Oxysterol-binding protein-related protein 2 (OSBP-related| protein 2) (ORP-2) Length = 480 Score = 35.8 bits (81), Expect = 0.096 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ K +G ++ S +T+P+ EP+S LQ++ E ME+ Sbjct: 75 SVWTILKKCVGLEL-SKITMPIAFNEPLSFLQRITEYMEH 113
>OSBP2_MOUSE (Q5QNQ6) Oxysterol-binding protein 2| Length = 908 Score = 35.8 bits (81), Expect = 0.096 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%) Frame = +1 Query: 442 MKGRWKQEDRDSY----WKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 +K R + D+ +Y W +M IG ++ S + +PV EP+SMLQ++ E +EY Sbjct: 504 VKRRVRIPDKPNYSLNLWSIMKNCIGREL-SRIPMPVNFNEPLSMLQRLTEDLEY 557
>OSBP2_HUMAN (Q969R2) Oxysterol-binding protein 2 (Oxysterol-binding| protein-related protein 4) (OSBP-related protein 4) (ORP-4) Length = 916 Score = 35.4 bits (80), Expect = 0.13 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 9/88 (10%) Frame = +1 Query: 358 KSVNGMVGYEGLEVINPDGGTDDAE-----AEAMKGRWKQEDRDSY----WKMMNKYIGS 510 + G G ++ + D D A + +K R + ++ +Y W +M IG Sbjct: 474 RKAEGSTGTSSVDWSSADNVLDGASLVPKGSSKVKRRVRIPNKPNYSLNLWSIMKNCIGR 533 Query: 511 DVTSLVTLPVIIFEPMSMLQKMAELMEY 594 ++ S + +PV EP+SMLQ++ E +EY Sbjct: 534 EL-SRIPMPVNFNEPLSMLQRLTEDLEY 560
>OSBL7_HUMAN (Q9BZF2) Oxysterol-binding protein-related protein 7 (OSBP-related| protein 7) (ORP-7) Length = 842 Score = 35.0 bits (79), Expect = 0.16 Identities = 16/40 (40%), Positives = 27/40 (67%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ IG D+ S V++PV + EP++ LQ++ E +EY Sbjct: 478 SLWNILRNNIGKDL-SKVSMPVQLNEPLNTLQRLCEELEY 516
>OSBL3_MOUSE (Q9DBS9) Oxysterol-binding protein-related protein 3 (OSBP-related| protein 3) (ORP-3) Length = 855 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ IG D+ S V +PV + EP++ LQ++ E +EY Sbjct: 495 SLWSILRNNIGKDL-SKVAMPVELNEPLNTLQRLCEELEY 533
>OSBP1_RABIT (P16258) Oxysterol-binding protein 1| Length = 809 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +1 Query: 481 WKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 W +M IG ++ S + +PV EP+SMLQ++ E +EY Sbjct: 422 WSIMKNCIGKEL-SKIPMPVNFNEPLSMLQRLTEDLEY 458
>OSBL3_HUMAN (Q9H4L5) Oxysterol-binding protein-related protein 3 (OSBP-related| protein 3) (ORP-3) Length = 887 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S W ++ IG D+ S V +PV + EP++ LQ++ E +EY Sbjct: 527 SLWNILRNNIGKDL-SKVAMPVELNEPLNTLQRLCEELEY 565
>OSBP1_HUMAN (P22059) Oxysterol-binding protein 1| Length = 807 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +1 Query: 481 WKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 W +M IG ++ S + +PV EP+SMLQ++ E +EY Sbjct: 420 WSIMKNCIGKEL-SKIPMPVNFNEPLSMLQRLTEDLEY 456
>OSBL6_HUMAN (Q9BZF3) Oxysterol-binding protein-related protein 6 (OSBP-related| protein 6) (ORP-6) Length = 934 Score = 33.9 bits (76), Expect = 0.36 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +1 Query: 481 WKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 W ++ IG D+ S V++PV + EP++ LQ + E MEY Sbjct: 572 WNILRNNIGKDL-SKVSMPVELNEPLNTLQHLCEEMEY 608
>OSBL6_MOUSE (Q8BXR9) Oxysterol-binding protein-related protein 6 (OSBP-related| protein 6) (ORP-6) Length = 959 Score = 33.9 bits (76), Expect = 0.36 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +1 Query: 481 WKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 W ++ IG D+ S V++PV + EP++ LQ + E MEY Sbjct: 597 WNILRNNIGKDL-SKVSMPVELNEPLNTLQHLCEEMEY 633
>YEH1_SCHPO (O13944) Oxysterol-binding protein homolog C23H4.01c| Length = 945 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S ++ K IG D++S + PV+ EP ++LQ+ AE +EY Sbjct: 572 SILSILRKNIGKDISS-IPAPVVSNEPCNLLQRCAEDLEY 610
>OSH3_YEAST (P38713) Oxysterol-binding protein homolog 3| Length = 996 Score = 30.8 bits (68), Expect = 3.1 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +1 Query: 475 SYWKMMNKYIGSDVTSLVTLPVIIFEPMSMLQKMAELMEY 594 S + K +G D++S + +PV EP+S+LQ ++E EY Sbjct: 642 SLLSFLRKNVGKDLSS-IAMPVTSNEPISILQLISETFEY 680
>KIF3B_HUMAN (O15066) Kinesin-like protein KIF3B (Microtubule plus end-directed| kinesin motor 3B) (HH0048) Length = 747 Score = 30.0 bits (66), Expect = 5.3 Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +1 Query: 412 GGTDDAEAEAMKGRWKQEDRDSYWKMMNKYIGSDVTSLV-TLPVIIFEPMSMLQKMAELM 588 GG ++ E E +G + +D+D YW+ + + + ++V ++ E M +L++ + M Sbjct: 391 GGGEEEEEEGEEGEEEGDDKDDYWREQQEKLEIEKRAIVEDHSLVAEEKMRLLKEKEKKM 450 Query: 589 E 591 E Sbjct: 451 E 451
>ENG1_SCHPO (Q9UT45) Endo-1,3(4)-beta-glucanase 1 precursor (EC 3.2.1.6)| (Endo-1,4-beta-glucanase 1) (Endo-1,3-beta-glucanase 1) (Laminarinase-1) Length = 1016 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = +3 Query: 414 GNRRCGSRGYEGAMETRGSRQLLEDDEQVHRIRCNVTCYTSSHHL*ADVNASEN 575 G + CGS Y+ + + QL + V + CN CY S ++ +D + S N Sbjct: 877 GMQLCGSNYYDASSYYCDNDQLCPIIDGVDYLSCNGACYNPSQYVCSDGSLSPN 930
>MLE_DROME (P24785) Dosage compensation regulator (EC 3.6.1.-) (ATP-dependent| RNA helicase mle) (Protein male-less) (Protein no action potential) Length = 1293 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -2 Query: 384 IANHPVDRFVDGGAPAAHARGDRGEEASASAGRRGQVLVLG 262 I H +F DGG P R + G ++S GRRG G Sbjct: 1162 ILPHQSRQFSDGGGPPKRGRFETGRFTNSSFGRRGNGRTFG 1202
>SYM_BIFLO (P59076) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 621 Score = 29.3 bits (64), Expect = 9.0 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -2 Query: 366 DRFVDGGAPAAHARGDRGEEASA 298 DR+++G P HA G RG++ A Sbjct: 136 DRYIEGECPICHAEGARGDQCDA 158
>KIF3B_MOUSE (Q61771) Kinesin-like protein KIF3B (Microtubule plus end-directed| kinesin motor 3B) Length = 747 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = +1 Query: 412 GGTDDAEAEAMKGRWKQEDRDSYWKMMNKYIGSDVTSLV-TLPVIIFEPMSMLQKMAELM 588 GG ++ E E +G +D+D YW+ + + + ++V ++ E M +L++ + M Sbjct: 391 GGGEEEEEEGEEGEEDGDDKDDYWREQQEKLEIEKRAIVEDHSLVAEEKMRLLKEKEKKM 450 Query: 589 E 591 E Sbjct: 451 E 451 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,451,182 Number of Sequences: 219361 Number of extensions: 1099157 Number of successful extensions: 4902 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 4371 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4863 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
