ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49d01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB066265.2| Triticum aestivum WCSP1 mRNA for cold shock protein-1, complete cds Length = 1029 Score = 494 bits (249), Expect = e-136 Identities = 267/273 (97%) Strand = Plus / Plus Query: 9 cgatctagggtttcctgctagggttttggtccttcgttttcggcggcgcaagatgggggc 68 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10 cgatctagggtttcctgctagggttttggtccttcggtttcggcggcgcaagatggggga 69 Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 129 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 189 Query: 189 cagcctcaacgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgggcgcac 248 ||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||| Sbjct: 190 cagcctcaacgagaacgacaccgtcgagttcgaggtcatcaccggcgacgacggtcgcac 249 Query: 249 caaggcctccgacgtcaccgcaccaggaggagg 281 ||||||||||||||||||||||||||||||||| Sbjct: 250 caaggcctccgacgtcaccgcaccaggaggagg 282 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 522 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 cgtggatgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 508 Query: 523 ggcggtggc 531 ||||||||| Sbjct: 509 ggcggtggc 517 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcggcgg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 568 gtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggtggtgg 627 Query: 528 tggc 531 |||| Sbjct: 628 tggc 631 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 519 cggcggcggtggctacggaggaggtggcggcggcggccgcgagtgctac 567 |||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 526 cggcggtggtggctatggaggaggcggcggcggcggccgcgagtgctac 574 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtgg 545 ||||||||||| ||||||||||| ||||| Sbjct: 632 ggcggcggcggcggctacggaggcggtgg 660
>dbj|AB161683.1| Triticum aestivum WCSP3 mRNA for cold shock domain protein 3, complete cds Length = 1025 Score = 452 bits (228), Expect = e-124 Identities = 255/264 (96%) Strand = Plus / Plus Query: 18 gtttcctgctagggttttggtccttcgttttcggcggcgcaagatgggggcgagggtcaa 77 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 gtttcctgctagggttttggtccttcgttttcggcggcgcaagatgggggagagggtcaa 60 Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacgg 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 61 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggacgacgg 120 Query: 138 cagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaa 197 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cggcgaggaccttttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaa 180 Query: 198 cgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgggcgcaccaaggcctc 257 ||||||||||| |||||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 181 cgagaacgacgccgtcgagttcgagataatcaccggcgacgacggacgcaccaaggcctc 240 Query: 258 cgacgtcaccgcaccaggaggagg 281 |||||||||||||||||||||||| Sbjct: 241 cgacgtcaccgcaccaggaggagg 264 Score = 127 bits (64), Expect = 4e-26 Identities = 84/90 (93%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccag---ggc 519 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 563 cgtgagtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 622 Query: 520 ggcggcggtggctacggaggaggtggcggc 549 |||||||| ||||||||||| ||||||||| Sbjct: 623 ggcggcggcggctacggaggcggtggcggc 652 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 522 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 449 cgtgggtgctacaagtgcggcgaagatggccacatctccagggactgcccccagggcggc 508 Query: 523 gg 524 || Sbjct: 509 gg 510 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 519 cggcggcggtggctacggaggaggtggcggcggcggccgcgagtgctac 567 |||||| |||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 526 cggcggtggtggctacggaggtggtggcggcggcggccgtgagtgctac 574 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcggcggccgcgagtgctac 567 ||||||||||| ||||| || || ||||||||||| | ||||||| Sbjct: 416 ggcggtggctatggaggcggcggtggcggcggccgtgggtgctac 460 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggc 552 ||||| |||||||||||||| ||||| |||||| Sbjct: 356 ggcggtggtggctacggaggcggtggtggcggc 388 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacgg 536 |||||||||||||||||||| Sbjct: 332 ggcggcggcggtggctacgg 351
>dbj|AB161682.1| Triticum aestivum WCSP2 mRNA for cold shock domain protein 2, complete cds Length = 990 Score = 430 bits (217), Expect = e-117 Identities = 264/279 (94%), Gaps = 3/279 (1%) Strand = Plus / Plus Query: 6 caccgatctagggtttcctgctagggttttggtccttcgttttcggcggcg---caagat 62 |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 1 caccgatctagggtttcctgctagggttttagtccttcgtttccggcggcggcgcaagat 60 Query: 63 gggggcgagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 ||| | ||| | ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 gggtgagagactgaagggtaccgtgaagtggttcaacgtgaccaaggggttcggcttcat 120 Query: 123 ctccccggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacgg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 121 ctccccggaggacggcagcgaggacctcttcgtccaccagtccgccatcaaggccgacgg 180 Query: 183 ctaccgcagcctcaacgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgg 242 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 181 ctaccgcagcctcaacgagaacgacgtcgtcgagttcgaggtcatcaccggcgacgacgg 240 Query: 243 gcgcaccaaggcctccgacgtcaccgcaccaggaggagg 281 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 241 gcgcaccaaggccaccgacgtcaccgcaccaggaggagg 279 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 522 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 cgtgagtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 553 Query: 523 gg 524 || Sbjct: 554 gg 555 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccgc 558 |||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 428 ggcggcggtggcggctacggaggtggtggtggcggcggccgc 469 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggcggccgcgagtgctac 567 |||||||| ||||||||||||| |||| |||||||| ||||||||| Sbjct: 458 ggcggcggccgctacggaggaggcagcggtggcggccgtgagtgctac 505 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggc 549 ||||||||||||||||| || ||||||||| Sbjct: 392 ggcggcggtggctacggcggcggtggcggc 421 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 518 gcggcggcggtggctacggaggagg 542 ||||||||||||||||||| ||||| Sbjct: 333 gcggcggcggtggctacggtggagg 357
>dbj|AB158409.1| Triticum aestivum GRP mRNA for putative glycine-rich protein, complete cds Length = 996 Score = 430 bits (217), Expect = e-117 Identities = 264/279 (94%), Gaps = 3/279 (1%) Strand = Plus / Plus Query: 6 caccgatctagggtttcctgctagggttttggtccttcgttttcggcggcg---caagat 62 |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 1 caccgatctagggtttcctgctagggttttagtccttcgtttccggcggcggcgcaagat 60 Query: 63 gggggcgagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 ||| | ||| | ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 gggtgagagactgaagggtaccgtgaagtggttcaacgtgaccaaggggttcggcttcat 120 Query: 123 ctccccggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacgg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 121 ctccccggaggacggcagcgaggacctcttcgtccaccagtccgccatcaaggccgacgg 180 Query: 183 ctaccgcagcctcaacgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgg 242 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 181 ctaccgcagcctcaacgagaacgacgtcgtcgagttcgaggtcatcaccggcgacgacgg 240 Query: 243 gcgcaccaaggcctccgacgtcaccgcaccaggaggagg 281 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 241 gcgcaccaaggccaccgacgtcaccgcaccaggaggagg 279 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 522 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 cgtgagtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 553 Query: 523 gg 524 || Sbjct: 554 gg 555 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccgc 558 |||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 428 ggcggcggtggcggctacggaggtggtggtggcggcggccgc 469 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggcggccgcgagtgctac 567 |||||||| ||||||||||||| |||| |||||||| ||||||||| Sbjct: 458 ggcggcggccgctacggaggaggcagcggtggcggccgtgagtgctac 505 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggc 549 |||||||||||||||||||| || |||||| Sbjct: 392 ggcggcggtggctacggaggtggcggcggc 421 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 518 gcggcggcggtggctacggaggagg 542 ||||||||||||||||||| ||||| Sbjct: 333 gcggcggcggtggctacggtggagg 357
>ref|XM_479920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 168 bits (85), Expect = 1e-38 Identities = 172/201 (85%) Strand = Plus / Plus Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 101 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 160 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 161 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 220 Query: 189 cagcctcaacgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgggcgcac 248 |||||||||||| |||||||||||||||| ||| ||||| ||||||| ||||| Sbjct: 221 cagcctcaacgacggcgacgtcgtcgagttctccgtcggatccggcaacgacggccgcac 280 Query: 249 caaggcctccgacgtcaccgc 269 ||||||| ||||||||||| Sbjct: 281 caaggccgtggacgtcaccgc 301 Score = 87.7 bits (44), Expect = 4e-14 Identities = 79/91 (86%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgcccccag------ggcgg 521 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 497 gtgctacaagtgcggcgaggagggccacatggccagggactgctcccagggaggaggcgg 556 Query: 522 cggcggtggctacggaggaggtggcggcggc 552 ||| ||||||||||| || |||||||||||| Sbjct: 557 cggtggtggctacggtggtggtggcggcggc 587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccacaccgatctagggtttc 22 |||||||||||||||||||| Sbjct: 16 ccacaccgatctagggtttc 35
>ref|XM_507115.1| PREDICTED Oryza sativa (japonica cultivar-group), P0582D05.112 mRNA Length = 984 Score = 168 bits (85), Expect = 1e-38 Identities = 172/201 (85%) Strand = Plus / Plus Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 101 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 160 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 161 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 220 Query: 189 cagcctcaacgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgggcgcac 248 |||||||||||| |||||||||||||||| ||| ||||| ||||||| ||||| Sbjct: 221 cagcctcaacgacggcgacgtcgtcgagttctccgtcggatccggcaacgacggccgcac 280 Query: 249 caaggcctccgacgtcaccgc 269 ||||||| ||||||||||| Sbjct: 281 caaggccgtggacgtcaccgc 301 Score = 87.7 bits (44), Expect = 4e-14 Identities = 79/91 (86%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgcccccag------ggcgg 521 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 497 gtgctacaagtgcggcgaggagggccacatggccagggactgctcccagggaggaggcgg 556 Query: 522 cggcggtggctacggaggaggtggcggcggc 552 ||| ||||||||||| || |||||||||||| Sbjct: 557 cggtggtggctacggtggtggtggcggcggc 587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccacaccgatctagggtttc 22 |||||||||||||||||||| Sbjct: 16 ccacaccgatctagggtttc 35
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 168 bits (85), Expect = 1e-38 Identities = 172/201 (85%) Strand = Plus / Minus Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 1639560 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 1639501 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 1639500 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 1639441 Query: 189 cagcctcaacgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgggcgcac 248 |||||||||||| |||||||||||||||| ||| ||||| ||||||| ||||| Sbjct: 1639440 cagcctcaacgacggcgacgtcgtcgagttctccgtcggatccggcaacgacggccgcac 1639381 Query: 249 caaggcctccgacgtcaccgc 269 ||||||| ||||||||||| Sbjct: 1639380 caaggccgtggacgtcaccgc 1639360 Score = 87.7 bits (44), Expect = 4e-14 Identities = 79/91 (86%), Gaps = 6/91 (6%) Strand = Plus / Minus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgcccccag------ggcgg 521 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1639164 gtgctacaagtgcggcgaggagggccacatggccagggactgctcccagggaggaggcgg 1639105 Query: 522 cggcggtggctacggaggaggtggcggcggc 552 ||| ||||||||||| || |||||||||||| Sbjct: 1639104 cggtggtggctacggtggtggtggcggcggc 1639074 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 134 acggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||||||||||| ||||| Sbjct: 5852438 acggcggcgaggacctcttcgtccactagtcc 5852469 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggccgcg 559 |||||||| |||||||||||||||| Sbjct: 27057796 ggaggaggaggcggcggcggccgcg 27057820 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggccgc 558 ||||| ||||||||||||||||||| Sbjct: 23347006 cggagaaggtggcggcggcggccgc 23347030 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 10775953 ggaggaggtggcggcggcggc 10775933 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 520 ggcggcggtggctacggaggaggtggcggcggcggc 555 |||||||||||| ||| ||||| |||||||||||| Sbjct: 24510617 ggcggcggtggcggcggcggaggcggcggcggcggc 24510582 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 ggcggcggcggccgcgagtgctac 567 |||||||||||| ||||||||||| Sbjct: 21020339 ggcggcggcggcggcgagtgctac 21020316 Score = 40.1 bits (20), Expect = 7.7 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 521 gcggcggtggctacggaggaggt-ggcggcggcggc 555 ||||||||||| |||||||||| |||||||||||| Sbjct: 14074914 gcggcggtggcggcggaggaggtcggcggcggcggc 14074949 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcgag 561 ||||||||| |||||||||||| ||||| Sbjct: 2928704 cggaggaggcggcggcggcggcggcgag 2928677 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccacaccgatctagggtttc 22 |||||||||||||||||||| Sbjct: 1639645 ccacaccgatctagggtttc 1639626
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 168 bits (85), Expect = 1e-38 Identities = 172/201 (85%) Strand = Plus / Minus Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 39060 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 39001 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 39000 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 38941 Query: 189 cagcctcaacgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgggcgcac 248 |||||||||||| |||||||||||||||| ||| ||||| ||||||| ||||| Sbjct: 38940 cagcctcaacgacggcgacgtcgtcgagttctccgtcggatccggcaacgacggccgcac 38881 Query: 249 caaggcctccgacgtcaccgc 269 ||||||| ||||||||||| Sbjct: 38880 caaggccgtggacgtcaccgc 38860 Score = 87.7 bits (44), Expect = 4e-14 Identities = 79/91 (86%), Gaps = 6/91 (6%) Strand = Plus / Minus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgcccccag------ggcgg 521 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 38664 gtgctacaagtgcggcgaggagggccacatggccagggactgctcccagggaggaggcgg 38605 Query: 522 cggcggtggctacggaggaggtggcggcggc 552 ||| ||||||||||| || |||||||||||| Sbjct: 38604 cggtggtggctacggtggtggtggcggcggc 38574 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccacaccgatctagggtttc 22 |||||||||||||||||||| Sbjct: 39145 ccacaccgatctagggtttc 39126
>dbj|AK101577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050L02, full insert sequence Length = 984 Score = 168 bits (85), Expect = 1e-38 Identities = 172/201 (85%) Strand = Plus / Plus Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 101 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 160 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 161 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 220 Query: 189 cagcctcaacgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgggcgcac 248 |||||||||||| |||||||||||||||| ||| ||||| ||||||| ||||| Sbjct: 221 cagcctcaacgacggcgacgtcgtcgagttctccgtcggatccggcaacgacggccgcac 280 Query: 249 caaggcctccgacgtcaccgc 269 ||||||| ||||||||||| Sbjct: 281 caaggccgtggacgtcaccgc 301 Score = 87.7 bits (44), Expect = 4e-14 Identities = 79/91 (86%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgcccccag------ggcgg 521 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 497 gtgctacaagtgcggcgaggagggccacatggccagggactgctcccagggaggaggcgg 556 Query: 522 cggcggtggctacggaggaggtggcggcggc 552 ||| ||||||||||| || |||||||||||| Sbjct: 557 cggtggtggctacggtggtggtggcggcggc 587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccacaccgatctagggtttc 22 |||||||||||||||||||| Sbjct: 16 ccacaccgatctagggtttc 35
>dbj|AK070034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A08, full insert sequence Length = 963 Score = 168 bits (85), Expect = 1e-38 Identities = 172/201 (85%) Strand = Plus / Plus Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 101 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 160 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 161 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 220 Query: 189 cagcctcaacgagaacgacgtcgtcgagttcgatgtcatcaccggcgacgacgggcgcac 248 |||||||||||| |||||||||||||||| ||| ||||| ||||||| ||||| Sbjct: 221 cagcctcaacgacggcgacgtcgtcgagttctccgtcggatccggcaacgacggccgcac 280 Query: 249 caaggcctccgacgtcaccgc 269 ||||||| ||||||||||| Sbjct: 281 caaggccgtggacgtcaccgc 301 Score = 87.7 bits (44), Expect = 4e-14 Identities = 79/91 (86%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgcccccag------ggcgg 521 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 497 gtgctacaagtgcggcgaggagggccacatggccagggactgctcccagggaggaggcgg 556 Query: 522 cggcggtggctacggaggaggtggcggcggc 552 ||| ||||||||||| || |||||||||||| Sbjct: 557 cggtggtggctacggtggtggtggcggcggc 587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccacaccgatctagggtttc 22 |||||||||||||||||||| Sbjct: 16 ccacaccgatctagggtttc 35
>ref|XM_463912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1219 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 144 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 139 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 198 Query: 145 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 189 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 199 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 243 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 233 gcgacgacgggcgcaccaaggcctccgacgtcaccg 268 |||| ||||| |||||||||||| ||||||||||| Sbjct: 287 gcgaggacggccgcaccaaggccgtcgacgtcaccg 322
>ref|XM_506692.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0088N06.21 mRNA Length = 1250 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 144 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 137 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 196 Query: 145 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 189 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 197 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 241 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 233 gcgacgacgggcgcaccaaggcctccgacgtcaccg 268 |||| ||||| |||||||||||| ||||||||||| Sbjct: 285 gcgaggacggccgcaccaaggccgtcgacgtcaccg 320
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 144 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 1104156 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 1104097 Query: 145 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 189 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 1104096 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 1104052 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggc 519 |||| |||||||||||||||| |||||| |||||| ||| ||||||| |||||||| Sbjct: 26361138 cgtgcgtgctacaagtgcggcaaggaggcccacatggccaaggactgctcccagggc 26361194 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 469 tgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcggc 525 ||||||||||| || |||||||||||||| ||| ||||||| ||| |||| ||||| Sbjct: 21639987 tgctacaagtgtggtgaggagggccacatggccaaggactgctccctgggcagcggc 21640043 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggcc 556 |||||||||||||||||||||| Sbjct: 32934358 ggaggaggtggcggcggcggcc 32934337 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggc 555 |||||||||||||||||||||| Sbjct: 16204071 cggaggaggtggcggcggcggc 16204092 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccgc 558 ||||||||||||||||||||| Sbjct: 28252177 ggaggtggcggcggcggccgc 28252157 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcgg 554 ||||||||||||||||||||| Sbjct: 23629440 cggaggaggtggcggcggcgg 23629460 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 23515486 ggaggaggtggcggcggcggc 23515466 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggccgcg 559 ||||||||||||||||| ||||||| Sbjct: 20185365 ggaggaggtggcggcggtggccgcg 20185341 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggccgc 558 |||||||| ||||||||||||||| Sbjct: 34816776 ggaggaggaggcggcggcggccgc 34816799 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 541 ggtggcggcggcggccgcgagtgc 564 ||||||||||||||| |||||||| Sbjct: 30409526 ggtggcggcggcggcggcgagtgc 30409549 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccg 557 |||||||||||||||||||| Sbjct: 25834920 ggaggtggcggcggcggccg 25834901 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcgg 554 |||||||||||||||||||| Sbjct: 8033284 ggaggaggtggcggcggcgg 8033265 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 233 gcgacgacgggcgcaccaaggcctccgacgtcaccg 268 |||| ||||| |||||||||||| ||||||||||| Sbjct: 1104008 gcgaggacggccgcaccaaggccgtcgacgtcaccg 1103973
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 144 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 56680 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 56621 Query: 145 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 189 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 56620 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 56576 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 233 gcgacgacgggcgcaccaaggcctccgacgtcaccg 268 |||| ||||| |||||||||||| ||||||||||| Sbjct: 56532 gcgaggacggccgcaccaaggccgtcgacgtcaccg 56497
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 144 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 92864 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 92805 Query: 145 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 189 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 92804 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 92760 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 233 gcgacgacgggcgcaccaaggcctccgacgtcaccg 268 |||| ||||| |||||||||||| ||||||||||| Sbjct: 92716 gcgaggacggccgcaccaaggccgtcgacgtcaccg 92681
>dbj|AK119758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F11, full insert sequence Length = 1219 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 144 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 139 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 198 Query: 145 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 189 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 199 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 243 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 233 gcgacgacgggcgcaccaaggcctccgacgtcaccg 268 |||| ||||| |||||||||||| ||||||||||| Sbjct: 287 gcgaggacggccgcaccaaggccgtcgacgtcaccg 322
>dbj|AK070711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061H10, full insert sequence Length = 1250 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 144 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 137 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 196 Query: 145 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 189 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 197 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 241
>gb|BT016623.1| Zea mays clone Contig456 mRNA sequence Length = 1039 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 144 |||||||||||||||| |||||||| ||||| |||||| |||| || || || || ||| Sbjct: 89 gtgaagtggttcaacggaaccaagggcttcggtttcatcacccccgacgatgggagtgag 148 Query: 145 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaacga 200 ||||| |||||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 149 gacctgttcgtccaccagtcatccatcaagtccgacggctaccgcagtcttaacga 204 Score = 79.8 bits (40), Expect = 9e-12 Identities = 78/91 (85%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 469 tgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcggcggt 528 |||| |||||||||||||||||||||||| | ||||||||| ||||||||||| Sbjct: 536 tgcttcaagtgcggcgaggagggccacatggcaagggactgctcccagggcggc------ 589 Query: 529 ggctacggaggaggtggcggcggcggccgcg 559 ||||||||||| || |||||||||||||||| Sbjct: 590 ggctacggagggggaggcggcggcggccgcg 620 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgcccc 513 ||||||||| |||||| ||||||||||||||||| | ||||||||| Sbjct: 628 gtgctacaactgcggccaggagggccacatctcccgcgactgcccc 673
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 6e-13 Identities = 123/150 (82%) Strand = Plus / Minus Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||| ||||| || |||||| | || ||| |||||| ||||||||||||||| | || Sbjct: 9401819 gagggtgaaggggacggtgaagggttttgacgccaccaatgggttcggcttcatcactcc 9401760 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 || |||| | |||||||||||||| ||||||||||| || |||||| ||||| ||| || Sbjct: 9401759 cgacgacgacggcgaggacctcttcatccaccagtcctccctcaagttcgacgactatcg 9401700 Query: 189 cagcctcaacgagaacgacgtcgtcgagtt 218 |||||||| || | ||| ||| ||||||| Sbjct: 9401699 gagcctcaatgacagcgatgtcatcgagtt 9401670 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcggcggc 555 ||||| ||||||||||||||||||||||||||| Sbjct: 26169421 ggcggcggctacggaggaggtggcggcggcggc 26169453 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcgg 554 |||||||||||||||||||| Sbjct: 3706425 ggaggaggtggcggcggcgg 3706406
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 83.8 bits (42), Expect = 6e-13 Identities = 123/150 (82%) Strand = Plus / Minus Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||| ||||| || |||||| | || ||| |||||| ||||||||||||||| | || Sbjct: 99219 gagggtgaaggggacggtgaagggttttgacgccaccaatgggttcggcttcatcactcc 99160 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 || |||| | |||||||||||||| ||||||||||| || |||||| ||||| ||| || Sbjct: 99159 cgacgacgacggcgaggacctcttcatccaccagtcctccctcaagttcgacgactatcg 99100 Query: 189 cagcctcaacgagaacgacgtcgtcgagtt 218 |||||||| || | ||| ||| ||||||| Sbjct: 99099 gagcctcaatgacagcgatgtcatcgagtt 99070
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 6e-13 Identities = 123/150 (82%) Strand = Plus / Minus Query: 69 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 |||||| ||||| || |||||| | || ||| |||||| ||||||||||||||| | || Sbjct: 9399940 gagggtgaaggggacggtgaagggttttgacgccaccaatgggttcggcttcatcactcc 9399881 Query: 129 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 188 || |||| | |||||||||||||| ||||||||||| || |||||| ||||| ||| || Sbjct: 9399880 cgacgacgacggcgaggacctcttcatccaccagtcctccctcaagttcgacgactatcg 9399821 Query: 189 cagcctcaacgagaacgacgtcgtcgagtt 218 |||||||| || | ||| ||| ||||||| Sbjct: 9399820 gagcctcaatgacagcgatgtcatcgagtt 9399791 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcggcggc 555 ||||| ||||||||||||||||||||||||||| Sbjct: 26260730 ggcggcggctacggaggaggtggcggcggcggc 26260762 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcgg 554 |||||||||||||||||||| Sbjct: 3706536 ggaggaggtggcggcggcgg 3706517
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 79.8 bits (40), Expect = 9e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 86 tgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgagg 145 ||||| ||||| ||| |||||| ||||||||||||||| | || || ||||| | |||| Sbjct: 158214 tgaaggggttcgacgccaccaatgggttcggcttcatcactcccgacaacggcggtgagg 158155 Query: 146 acctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaa 197 ||||||||||||||| |||| || |||||| |||| |||| || |||||||| Sbjct: 158154 acctcttcgtccaccggtcctccctcaagttcgacagctatcggagcctcaa 158103
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 79.8 bits (40), Expect = 9e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 86 tgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgagg 145 ||||| ||||| ||| |||||| ||||||||||||||| | || || ||||| | |||| Sbjct: 20910 tgaaggggttcgacgccaccaatgggttcggcttcatcactcccgacaacggcggtgagg 20851 Query: 146 acctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaa 197 ||||||||||||||| |||| || |||||| |||| |||| || |||||||| Sbjct: 20850 acctcttcgtccaccggtcctccctcaagttcgacagctatcggagcctcaa 20799
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 9e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 86 tgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgagg 145 ||||| ||||| ||| |||||| ||||||||||||||| | || || ||||| | |||| Sbjct: 25916682 tgaaggggttcgacgccaccaatgggttcggcttcatcactcccgacaacggcggtgagg 25916623 Query: 146 acctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaa 197 ||||||||||||||| |||| || |||||| |||| |||| || |||||||| Sbjct: 25916622 acctcttcgtccaccggtcctccctcaagttcgacagctatcggagcctcaa 25916571 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 5341569 ggcggcggcggtggcggcggcggcggtggcggcggcggc 5341607 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 519 cggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||| |||||| || |||||||||||| Sbjct: 22640252 cggcggcggtggcgccggagggggaggcggcggcggc 22640216 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 4914007 ggaggaggtggcggcggcggc 4913987 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 ggtggcggcggcggccgcga 560 |||||||||||||||||||| Sbjct: 14574968 ggtggcggcggcggccgcga 14574987 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 gaggaggtggcggcggcggc 555 |||||||||||||||||||| Sbjct: 2498449 gaggaggtggcggcggcggc 2498430
>gb|AY104445.1| Zea mays PCO063886 mRNA sequence Length = 540 Score = 79.8 bits (40), Expect = 9e-12 Identities = 78/91 (85%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 469 tgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcggcggt 528 |||| |||||||||||||||||||||||| | ||||||||| ||||||||||| Sbjct: 49 tgcttcaagtgcggcgaggagggccacatggcaagggactgctcccagggcggc------ 102 Query: 529 ggctacggaggaggtggcggcggcggccgcg 559 ||||||||||| || |||||||||||||||| Sbjct: 103 ggctacggagggggaggcggcggcggccgcg 133 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgcccc 513 ||||||||| |||||| ||||||||||||||||| | ||||||||| Sbjct: 141 gtgctacaactgcggccaggagggccacatctcccgcgactgcccc 186
>ref|NM_193345.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 531 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 109 gggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgcc 168 |||||| |||||||| | || || || ||||||||||| |||||| ||||||||||| || Sbjct: 286 gggttcagcttcatcactcccgacgatggcagcgaggatctcttcatccaccagtcctcc 345 Query: 169 atcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagtt 218 |||||| ||| ||||| || ||||||||||| |||| ||| ||||||| Sbjct: 346 ctcaagttcgatggctatcggagcctcaacgacgacgatgtcatcgagtt 395
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 109 gggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgcc 168 |||||| |||||||| | || || || ||||||||||| |||||| ||||||||||| || Sbjct: 20288751 gggttcagcttcatcactcccgacgatggcagcgaggatctcttcatccaccagtcctcc 20288810 Query: 169 atcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagtt 218 |||||| ||| ||||| || ||||||||||| |||| ||| ||||||| Sbjct: 20288811 ctcaagttcgatggctatcggagcctcaacgacgacgatgtcatcgagtt 20288860 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 142 gaggacctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaacga 200 ||||||||||||||| |||||| | || ||| ||||||||||||||| ||||||||||| Sbjct: 12355041 gaggacctcttcgtcaaccagtactccctcatgtccgacggctaccggagcctcaacga 12354983 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 469 tgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcggcg 526 |||||||||||| |||||||||||||||| ||||||||||| || |||| ||||||| Sbjct: 12354794 tgctacaagtgcagcgaggagggccacatggccagggactgctccgagggtggcggcg 12354737 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccgcga 560 ||||||||||||||| ||||||||| || ||||||||| |||| Sbjct: 40914573 ggcggcggcggtggcggcggaggaggaggaggcggcggcggcga 40914616 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggccgcgag 561 |||||||||||||||||||||| ||||| Sbjct: 5542828 cggaggaggtggcggcggcggcggcgag 5542855 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcg 559 |||||| ||||||||||||||||||| Sbjct: 37349105 cggaggtggtggcggcggcggccgcg 37349080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccgc 558 ||||||||||||||||||||| Sbjct: 40705088 ggaggtggcggcggcggccgc 40705068 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 11587287 ggaggaggtggcggcggcggc 11587307 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 1321505 ggaggaggtggcggcggcggc 1321525 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 gaggaggtggcggcggcggc 555 |||||||||||||||||||| Sbjct: 18759534 gaggaggtggcggcggcggc 18759515 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 aggaggtggcggcggcggcc 556 |||||||||||||||||||| Sbjct: 12666053 aggaggtggcggcggcggcc 12666034 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggccgcgag 561 |||||||||||| ||||| ||||||||| Sbjct: 3594942 cggaggaggtggaggcggaggccgcgag 3594969
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 109 gggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgcc 168 |||||| |||||||| | || || || ||||||||||| |||||| ||||||||||| || Sbjct: 54784 gggttcagcttcatcactcccgacgatggcagcgaggatctcttcatccaccagtcctcc 54843 Query: 169 atcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagtt 218 |||||| ||| ||||| || ||||||||||| |||| ||| ||||||| Sbjct: 54844 ctcaagttcgatggctatcggagcctcaacgacgacgatgtcatcgagtt 54893
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||||||||||||| Sbjct: 1569266 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaggacggcagc 1569325 Query: 142 g 142 | Sbjct: 1569326 g 1569326 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||||||||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 2921641 accgtgaagtggttcaacgatgccaagggcttcggcttcatcaccccgga 2921592
>gb|AE011765.1| Xanthomonas axonopodis pv. citri str. 306, section 143 of 469 of the complete genome Length = 10446 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||||||||||||| Sbjct: 2586 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaggacggcagc 2645 Query: 142 g 142 | Sbjct: 2646 g 2646
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||||||||||||| Sbjct: 1972271 accgtcaagtggttcaacgacgccaagggatttggcttcatctctccggaggacggcagc 1972330 Query: 142 g 142 | Sbjct: 1972331 g 1972331 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||||||||| |||| ||||||| |||||||||||| ||||||| Sbjct: 2882360 gtgaagtggtttaacgatgccaagggcttcggcttcatcaccccgga 2882314
>ref|NM_183796.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 142 gaggacctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaacga 200 ||||||||||||||| |||||| | || ||| ||||||||||||||| ||||||||||| Sbjct: 835 gaggacctcttcgtcaaccagtactccctcatgtccgacggctaccggagcctcaacga 893
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0011P19 Length = 150811 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 142 gaggacctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaacga 200 ||||||||||||||| |||||| | || ||| ||||||||||||||| ||||||||||| Sbjct: 40686 gaggacctcttcgtcaaccagtactccctcatgtccgacggctaccggagcctcaacga 40628 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 469 tgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcggcg 526 |||||||||||| |||||||||||||||| ||||||||||| || |||| ||||||| Sbjct: 40439 tgctacaagtgcagcgaggagggccacatggccagggactgctccgagggtggcggcg 40382
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcg 520 |||| |||||||||||||||| ||||||||||||| ||| ||||||| ||||||||| Sbjct: 84290 cgtgcgtgctacaagtgcggcaaggagggccacatggccaaggactgctcccagggcg 84347
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||| ||||||||||||| | ||||||| || || |||||||| ||||||||||||||| Sbjct: 1950247 accgtcaagtggttcaacgacgccaagggatttggtttcatctctccggaggacggcagc 1950306 Query: 142 g 142 | Sbjct: 1950307 g 1950307 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||||||||| |||| ||||||| |||||||||||| ||||||| Sbjct: 2860505 gtgaagtggtttaacgatgccaagggcttcggcttcatcaccccgga 2860459
>gb|AE005954.1| Caulobacter crescentus CB15 section 280 of 359 of the complete genome Length = 10098 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 79 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggc 138 ||||||||||||||||||||| ||||||||| |||||||||||| || || ||||| Sbjct: 9966 ggaaccgtgaagtggttcaactccaccaagggcttcggcttcatccaacccgacaacggc 9907 Query: 139 agcgaggacctcttcgtccac 159 ||| |||| ||||||||||| Sbjct: 9906 ggcgcggacatcttcgtccac 9886
>gb|AE012228.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 136 of 460 of the complete genome Length = 11820 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||| ||||||||| Sbjct: 926 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaagacggcagc 985 Query: 142 g 142 | Sbjct: 986 g 986
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||| ||||||||| Sbjct: 3540661 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaagacggcagc 3540602 Query: 142 g 142 | Sbjct: 3540601 g 3540601 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 84 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||| ||||||| |||||||||||| Sbjct: 3387316 cgtgaagtggttcaacgatgccaagggcttcggcttcatc 3387277 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 84 cgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||||||||||||| | ||||||| |||||||||||| ||||||| Sbjct: 2221578 cgtgaagtggttcaatgatgccaagggcttcggcttcatcaccccgga 2221625
>emb|X57662.1|SVGLYRNA2 S. vulgare mRNA for glycine-rich RNA-binding protein (clone S2) Length = 807 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggc 552 ||||||||||||||||||||||| |||||||||||| Sbjct: 331 ggcggcggcggtggctacggaggcggtggcggcggc 366 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 ggctacggaggaggtggcggcggc 552 |||||||||||||| ||||||||| Sbjct: 388 ggctacggaggaggcggcggcggc 411
>gb|AF310215.2|AF310215 Sorghum bicolor glycine-rich RNA-binding protein mRNA, complete cds Length = 701 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggc 552 ||||||||||||||||||||||| |||||||||||| Sbjct: 271 ggcggcggcggtggctacggaggcggtggcggcggc 306 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 ggctacggaggaggtggcggcggc 552 |||||||||||||| ||||||||| Sbjct: 331 ggctacggaggaggcggcggcggc 354
>gb|BT009224.1| Triticum aestivum clone wle1n.pk0076.h7:fis, full insert mRNA sequence Length = 1874 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcgg 551 |||||||||||||||||||||||||| |||||||| Sbjct: 1167 ggcggcggcggtggctacggaggaggaggcggcgg 1201 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 526 ggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||||||||| |||||||| Sbjct: 1119 ggtggctacggaggaggtggcagcggcggc 1148
>dbj|AK174023.1| Ciona intestinalis cDNA, clone:ciad020i18, full insert sequence Length = 720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 332 ggcggcggcggtggctacggaggtggtggtggcggcggc 370 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcgg 551 ||||||||||||||||| || |||||||| Sbjct: 314 ggcggtggctacggaggtggcggcggcgg 342
>gb|AY157846.2| Chlamydomonas reinhardtii putative nucleic acid binding protein (Nab1) gene, complete cds Length = 4339 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 77 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 |||||||||| ||||||||||||| |||||| || |||||||||||| Sbjct: 538 agggaaccgtaaagtggttcaacgccaccaaaggcttcggcttcatc 584
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 548783 accgtgaagtggttcaacgcaaccaaagggttcggcttcatc 548742 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 |||||||| |||||||||| |||||| || |||||||||||| Sbjct: 624210 accgtgaaatggttcaacgccaccaaaggtttcggcttcatc 624251 Score = 44.1 bits (22), Expect = 0.49 Identities = 64/78 (82%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 |||||||| ||||||||| || ||||| |||||||||||| |||| || || ||| || Sbjct: 2119532 accgtgaaatggttcaacagtacgaagggcttcggcttcatcgcccccgatgatggcggc 2119591 Query: 142 gaggacctcttcgtccac 159 ||||| | ||||||||| Sbjct: 2119592 aaggacgttttcgtccac 2119609
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccac 159 |||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| Sbjct: 2312652 aaggggttcggcttcatcgccccggatgacggcagcaccgacgtcttcgtccac 2312705 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ggaaccgtgaagtggttcaacg 100 |||||||||||||||||||||| Sbjct: 1869038 ggaaccgtgaagtggttcaacg 1869017
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 3903319 gggaaccgtgaagtggttcaacgcgaccaagggctacggcttcatc 3903364 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggaaccgtgaagtggttcaa 98 |||||||||||||||||||| Sbjct: 3613284 ggaaccgtgaagtggttcaa 3613303
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||| ||||||||||||| | ||||||| |||||||||||| ||||||| Sbjct: 1679620 accgttaagtggttcaacgacgccaagggcttcggcttcatcaccccgga 1679669 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 91 tggttcaacgtcaccaaggggttcggcttcatc 123 |||||||||| | ||||||| |||||||||||| Sbjct: 2109891 tggttcaacgacgccaagggcttcggcttcatc 2109923
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 306461 gggaaccgtgaagtggttcaacgcgaccaagggctacggcttcatc 306506 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 ggaaccgtgaagtggttcaacg 100 |||||||||||||||||||||| Sbjct: 274 ggaaccgtgaagtggttcaacg 295
>gb|DQ122905.1| Chlamydomonas incerta putative nucleic acid-binding protein (nab1) mRNA, partial cds Length = 711 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 77 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 136 |||||||||| ||||||||||||| ||| || || |||||||||||| | || | | | Sbjct: 56 agggaaccgtaaagtggttcaacgccactaaaggcttcggcttcatcacgcctggtggtg 115 Query: 137 gcagcgaggacctcttcgtccaccag 162 || ||||||||||||| ||||||||| Sbjct: 116 gcggcgaggacctctttgtccaccag 141
>gb|AE011876.1| Xanthomonas axonopodis pv. citri str. 306, section 254 of 469 of the complete genome Length = 10716 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||||||||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 6046 accgtgaagtggttcaacgatgccaagggcttcggcttcatcaccccgga 5997
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 2051855 gggaaccgtgaagtggttcaacgcgaccaagggctacggcttcatc 2051810
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||||||||||||||||| | | ||||| |||||||||||| ||| ||| ||||| || Sbjct: 296129 accgtgaagtggttcaacgacgcgaagggcttcggcttcatcacccaggacgacggtggc 296070 Query: 142 gaggac 147 |||||| Sbjct: 296069 gaggac 296064 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 144 |||||||||||||| | | | ||||| |||||||||||||||| ||| | ||| ||||| Sbjct: 1475167 gtgaagtggttcaatgacgcgaagggcttcggcttcatctcccaggacggtggcggcgag 1475108 Query: 145 gacctcttcgtccacca 161 ||| | ||||||||||| Sbjct: 1475107 gacgtgttcgtccacca 1475091 Score = 54.0 bits (27), Expect = 5e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||||||||||||||||| | ||||| |||||||||||| ||| ||| | |||| || Sbjct: 3618871 accgtgaagtggttcaacgatgcgaagggcttcggcttcatcacccaggacggcggcggc 3618812 Query: 142 gaggacctcttcgtccaccagtccgccatcaagtccgacggct 184 |||||| | ||| |||||| |||||||| || |||| |||| Sbjct: 3618811 gaggacgtgttctgccaccacaccgccatccaggccgagggct 3618769 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggagg 133 ||||||||||||||||||| | | ||||| | ||| |||||||||| ||||| Sbjct: 1431466 accgtgaagtggttcaacgacgcgaagggttacggtttcatctcccaggagg 1431517 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||||| | ||||| |||||||||||| Sbjct: 1137017 accgtgaagtggttcaacgatgcgaagggcttcggcttcatc 1136976 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcgg 554 |||||||||||||||||||| Sbjct: 2939761 ggaggaggtggcggcggcgg 2939780
>gb|AF098529.1|AF098529 Myxococcus xanthus CspB (cspB) gene, complete cds Length = 825 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||||| | ||||||||||||| |||||| Sbjct: 245 accgtgaagtggttcaacgacgccaaggggttcggattcatc 286
>dbj|AB026847.1| Ciona intestinalis CiGRP1 mRNA for cold-inducible RNA-binding protein, complete cds Length = 669 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcgg 554 ||||||||||||||||||||||| ||||| |||||||| Sbjct: 330 ggcggcggcggtggctacggaggtggtggtggcggcgg 367 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcgg 551 ||||||||||||||||| || |||||||| Sbjct: 312 ggcggtggctacggaggtggcggcggcgg 340
>ref|XM_467092.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggc 519 |||| |||||||||||||||| |||||| |||||| ||| ||||||| |||||||| Sbjct: 352 cgtgcgtgctacaagtgcggcaaggaggcccacatggccaaggactgctcccagggc 408
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 1450531 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 1450575 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 88 aagtggttcaacgtcaccaaggggttcggcttc 120 |||||||||||| ||||||||| ||||||||| Sbjct: 1228943 aagtggttcaaccgcaccaagggtttcggcttc 1228911
>gb|AC146718.2| Oryza sativa chromosome 3 B1130H05 genomic sequence, complete sequence Length = 49565 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 523 ggcggtggctacggaggaggtggcggcggcggc 555 ||||| ||||||||||||||||||||||||||| Sbjct: 16405 ggcggcggctacggaggaggtggcggcggcggc 16373
>ref|XM_966372.1| PREDICTED: Tribolium castaneum similar to Tubulin tyrosine ligase-like protein 2 (Testis-specific protein NYD-TSPG) (LOC660112), mRNA Length = 12990 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggc 549 |||||||||||||||||||||||||| |||||| Sbjct: 12727 ggcggcggcggtggctacggaggaggcggcggc 12759
>gb|AE009494.1| Brucella melitensis 16M chromosome I, section 51 of 195 of the complete sequence Length = 10029 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 296 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 252
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggc 519 |||| |||||||||||||||| |||||| |||||| ||| ||||||| |||||||| Sbjct: 93490 cgtgcgtgctacaagtgcggcaaggaggcccacatggccaaggactgctcccagggc 93546
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 79 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||| || ||||||||||||| ||||||||| |||||||||||| Sbjct: 2052416 ggaacggtcaagtggttcaacgccaccaagggcttcggcttcatc 2052460 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttc 120 |||||||||||| ||||||||| ||||||||| Sbjct: 118599 aagtggttcaaccgcaccaagggcttcggcttc 118631
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 1468594 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 1468638 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 88 aagtggttcaacgtcaccaaggggttcggcttc 120 |||||||||||| ||||||||| ||||||||| Sbjct: 1247052 aagtggttcaaccgcaccaagggtttcggcttc 1247020
>dbj|AK119238.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-H08, full insert sequence Length = 746 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcggcggc 555 ||||| ||||||||||||||||||||||||||| Sbjct: 420 ggcggcggctacggaggaggtggcggcggcggc 452
>dbj|AK070016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K17, full insert sequence Length = 854 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcggcggc 555 ||||| ||||||||||||||||||||||||||| Sbjct: 424 ggcggcggctacggaggaggtggcggcggcggc 456
>dbj|AK059164.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-D11, full insert sequence Length = 779 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcggcggc 555 ||||| ||||||||||||||||||||||||||| Sbjct: 423 ggcggcggctacggaggaggtggcggcggcggc 455
>gb|AF010579.1|AF010579 Oryza sativa glycine-rich protein (OSGRP1) mRNA, complete cds Length = 713 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcggcggc 555 ||||| ||||||||||||||||||||||||||| Sbjct: 333 ggcggcggctacggaggaggtggcggcggcggc 365
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 1465748 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 1465792 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 88 aagtggttcaacgtcaccaaggggttcggcttc 120 |||||||||||| ||||||||| ||||||||| Sbjct: 1244202 aagtggttcaaccgcaccaagggtttcggcttc 1244170
>dbj|AP006113.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT45A24, TM0197, complete sequence Length = 112846 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 105 caaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtc 164 |||||| |||||||||||| || || |||||| | || || |||||||||||||| || Sbjct: 106960 caagggtttcggcttcatcaagcccgatgacggcggagaagatctcttcgtccaccaatc 107019 Query: 165 cgccatcaagtccgacggctaccg 188 | |||||| |||||||||||||| Sbjct: 107020 ctccatcagatccgacggctaccg 107043
>gb|AF317639.1| Marsilea strigosa microsatellite IIIB8 sequence Length = 430 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||| ||||||||| |||||||||||| Sbjct: 64 gtgaagtggttcaacagcaccaagggcttcggcttcatc 26
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgaggac 147 ||||||||||||| | | ||||| ||||||||||| | ||||| || ||||||||||| Sbjct: 2658257 aagtggttcaacgactcgaagggcttcggcttcattactccggacgatggcagcgaggat 2658316 Query: 148 ctcttcg 154 ||||||| Sbjct: 2658317 ctcttcg 2658323 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||| ||||||||||||| | ||||||| ||||| |||||| Sbjct: 1088053 accgtaaagtggttcaacgactccaagggcttcggtttcatc 1088012 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||||||||| | | ||||||| ||||| |||||| ||||||| Sbjct: 2055899 aagtggttcaatgactccaagggcttcggtttcatcaccccgga 2055856
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 85 gtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 |||||||||||||||| ||||||||| ||||| |||||| Sbjct: 4757570 gtgaagtggttcaacgccaccaagggcttcggtttcatc 4757608 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggg 110 |||||||||||||||||| |||| |||||||| Sbjct: 4127930 gggaaccgtgaagtggtttaacgcgaccaaggg 4127962
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgaggac 147 ||||||| ||||| ||| ||||| |||||||||||| ||||||| |||| || ||||| Sbjct: 69712 aagtggtacaacgccacgaagggcttcggcttcatcaccccggaatccggcggcaaggac 69771 Query: 148 ctcttcgtcca 158 |||||||||| Sbjct: 69772 atcttcgtcca 69782 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||| ||| ||||| ||||| |||||| Sbjct: 903515 aagtggttcaacgccacgaagggcttcggtttcatc 903480
>dbj|AK113857.1| Ciona intestinalis cDNA, clone:cicl014e22, full insert sequence Length = 314 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggcgg 554 |||||||||||||||||||| ||||| |||||||| Sbjct: 1 ggcggcggtggctacggaggtggtggtggcggcgg 35
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 127 ||||| |||||||||||| | ||||||| |||||||||||||||| Sbjct: 1589861 accgtaaagtggttcaacacctccaagggcttcggcttcatctccc 1589816
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||| ||||||||||||| | ||||||| |||||||||||| Sbjct: 579528 accgttaagtggttcaacgacgccaagggcttcggcttcatc 579487 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcat 122 ||||||||||||| |||||||| ||||||||||| Sbjct: 2435328 aagtggttcaacgagaccaagggtttcggcttcat 2435294 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||| | ||||||| || ||||||||| Sbjct: 2432261 aagtggttcaacgacgccaagggctttggcttcatc 2432296
>gb|AC084622.1|CBRG44P20 Caenorhabditis briggsae cosmid G44P20, complete sequence Length = 39166 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 72 ggtcaagggaaccgtgaagtggttcaacgt 101 ||||||||||||||| |||||||||||||| Sbjct: 23189 ggtcaagggaaccgtcaagtggttcaacgt 23218
>gb|AF281675.1|AF281675 Mycobacterium smegmatis cold-shock protein CspA (cspA) gene, complete cds Length = 204 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 77 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 136 ||||||| |||||||||||||||| ||||| |||||||||||| |||| ||||||| Sbjct: 8 agggaactgtgaagtggttcaacgcggagaagggcttcggcttcatcgcccccgaggacg 67 Query: 137 gc 138 || Sbjct: 68 gc 69
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 |||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 1576785 gggaaccgtgaagtggtttaacgcgaccaagggctttggcttcatc 1576740
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 77 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 136 ||||||| |||||||||||||||| |||||||||||||||||| | || ||||||| Sbjct: 379282 agggaactgtgaagtggttcaacgcggagaaggggttcggcttcatcgcgcccgaggacg 379341 Query: 137 gc 138 || Sbjct: 379342 gc 379343 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 84 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||| | ||||| |||||||||||| Sbjct: 3641681 cgtgaagtggttcaacggcgagaagggcttcggcttcatc 3641642
>gb|AC007869.2|AC007869 Genomic Sequence for Homo sapiens Clone 431C18 From Chromosome 8 (locus D8S1741), complete sequence Length = 196905 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccgc 558 ||||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 33432 ggcggcggcggcggcggcggaggaggaggcggcggcggccgc 33473
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 127 |||||||||||||||||| | | ||||| |||||||||||||||| Sbjct: 4395536 accgtgaagtggttcaacacctcgaagggcttcggcttcatctccc 4395581
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 77 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 136 ||||||| ||||| |||||||||| ||||| |||||||||||| |||| || |||| Sbjct: 691504 agggaactgtgaaatggttcaacggtgaaaagggcttcggcttcatcacccctgacgacg 691563 Query: 137 gcagcgaggacctcttcgtcca 158 ||| |||||||||||||||| Sbjct: 691564 gcacgaaggacctcttcgtcca 691585 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 cgtcgtcgagttcgatgtcatc 228 |||||||||||||||||||||| Sbjct: 654638 cgtcgtcgagttcgatgtcatc 654659 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 agggaaccgtgaagtggttcaacg 100 ||||||| |||||||||||||||| Sbjct: 448253 agggaactgtgaagtggttcaacg 448276
>ref|NM_138944.2| Mus musculus POU domain, class 4, transcription factor 2 (Pou4f2), mRNA Length = 3212 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccg 557 ||||||||||||||| |||||| || |||||||||||||| Sbjct: 411 ggcggcggcggtggcggcggaggcggaggcggcggcggccg 451
>gb|AC101757.12| Mus musculus chromosome 8, clone RP24-545I11, complete sequence Length = 148875 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccg 557 ||||||||||||||| |||||| || |||||||||||||| Sbjct: 15540 ggcggcggcggtggcggcggaggcggaggcggcggcggccg 15500
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 |||||||||||||||||| |||| |||||||| | ||||||||| Sbjct: 350436 gggaaccgtgaagtggtttaacgcaaccaagggctacggcttcat 350392
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 90020 accgtaaagtggttcaacagcaccaagggcttcggcttcat 90060
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 134331 accgtaaagtggttcaacagcaccaagggcttcggcttcat 134371 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 79 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||| || |||||||||||| ||||||||| ||||| |||||| Sbjct: 185181 ggaacggtaaagtggttcaacagcaccaagggcttcggtttcatc 185137
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 78 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 |||||||||||||||||| |||| |||||||| | ||||||||| Sbjct: 439414 gggaaccgtgaagtggtttaacgcgaccaagggctacggcttcat 439370 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 79 ggaaccgtgaagtggttcaacgtcaccaaggggttcggctt 119 ||||| |||||||||||||||| || ||||| |||||||| Sbjct: 2791626 ggaacagtgaagtggttcaacgcgacaaagggcttcggctt 2791586 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 79 ggaaccgtgaagtggttcaacgtcaccaaggggttcggctt 119 ||||| |||||||||||||||| || ||||| |||||||| Sbjct: 894163 ggaacagtgaagtggttcaacgcgacaaagggcttcggctt 894123
>emb|Y12424.1|SC12424 S.commersonii mRNA for SGRP-1 protein Length = 489 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggc 549 ||||| |||||||| |||||||||||||||||| Sbjct: 316 ggcggtggcggtggttacggaggaggtggcggc 348
>gb|DQ397610.1| Cenarchaeum symbiosum clone C14A09, complete sequence Length = 45665 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 516 gggcggcggcggtggctacggaggaggtggcggcggc 552 |||||||||||||||| ||||||||| ||||||||| Sbjct: 44003 gggcggcggcggtggcggcggaggagggggcggcggc 43967
>gb|DQ397544.1| Cenarchaeum symbiosum clone C02A01, complete sequence Length = 33294 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 516 gggcggcggcggtggctacggaggaggtggcggcggc 552 |||||||||||||||| ||||||||| ||||||||| Sbjct: 19690 gggcggcggcggtggcggcggaggaggaggcggcggc 19654
>gb|S68377.1| Brn-3.2=Brn-3-related POU transcription factor [mice, teratocarcinoma cell line F9, mRNA, 1915 nt] Length = 1915 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccg 557 ||||||||||||||| |||||| || |||||||||||||| Sbjct: 394 ggcggcggcggtggcggcggaggcggaggcggcggcggccg 434
>dbj|AK084240.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230012K19 product:POU domain, class 4, transcription factor 2, full insert sequence Length = 3211 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccg 557 ||||||||||||||| |||||| || |||||||||||||| Sbjct: 406 ggcggcggcggtggcggcggaggcggaggcggcggcggccg 446
>dbj|AK087546.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130318E11 product:POU domain, class 4, transcription factor 2, full insert sequence Length = 3212 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccg 557 ||||||||||||||| |||||| || |||||||||||||| Sbjct: 411 ggcggcggcggtggcggcggaggcggaggcggcggcggccg 451
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tgctacaagtgcggcgaggagggccacatctcc 501 |||||| |||||||||||||||||||| ||||| Sbjct: 21441703 tgctacgagtgcggcgaggagggccacctctcc 21441671 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggc 555 |||||||||||||||||||||| Sbjct: 12502814 cggaggaggtggcggcggcggc 12502835 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggagg 542 ||||||||||||||| |||||||||| Sbjct: 10266861 ggcggcggcggtggcgacggaggagg 10266886 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 522 |||| |||||||| ||| || ||||||||||||| ||||||||||| || ||| |||| Sbjct: 5122069 cgtgtgtgctacatgtgtggtgaggagggccacaaggccagggactgctcctaggacggc 5122128 Query: 523 g 523 | Sbjct: 5122129 g 5122129 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 acggaggaggtggcggcggcggcc 556 ||||||||||||||||| |||||| Sbjct: 21065587 acggaggaggtggcggccgcggcc 21065610 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggaggtggcggcggcggccg 557 |||||||||||||||||||| Sbjct: 19912182 ggaggtggcggcggcggccg 19912201 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gaggaggtggcggcggcggc 555 |||||||||||||||||||| Sbjct: 18372806 gaggaggtggcggcggcggc 18372825 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggaggtggcggcggcggccg 557 |||||||||||||||||||| Sbjct: 14419174 ggaggtggcggcggcggccg 14419193
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 469 tgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcggc 525 ||||||||||| || |||||||||||||| ||| ||||||| ||| |||| ||||| Sbjct: 128937 tgctacaagtgtggtgaggagggccacatggccaaggactgctccctgggcagcggc 128993
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tgctacaagtgcggcgaggagggccacatctcc 501 |||||| |||||||||||||||||||| ||||| Sbjct: 3313 tgctacgagtgcggcgaggagggccacctctcc 3281
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tgctacaagtgcggcgaggagggccacatctcc 501 |||||| |||||||||||||||||||| ||||| Sbjct: 58808 tgctacgagtgcggcgaggagggccacctctcc 58776
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 469 tgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcggc 525 ||||||||||| || |||||||||||||| ||| ||||||| ||| |||| ||||| Sbjct: 21384 tgctacaagtgtggtgaggagggccacatggccaaggactgctccctgggcagcggc 21440
>gb|AF030523.1|AF030523 Sinorhizobium meliloti putative periplasmic iron-binding protein (afuA), cold shock protein CspA (cspA), and probable ribosomal protein (rpsU) genes, complete cds Length = 2489 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 1392 accgtaaagtggttcaacagcaccaagggcttcggcttcat 1432
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||| ||||||||||||| | | ||||| |||||||| || ||||||| || ||| || Sbjct: 1334923 accgtcaagtggttcaacgacgctaagggtttcggctttattaccccggatgaaggcggc 1334982 Query: 142 gaggacctcttcg 154 |||||||| |||| Sbjct: 1334983 gaggaccttttcg 1334995
>gb|AY105436.1| Zea mays PCO078991 mRNA sequence Length = 938 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggc 549 |||||||||||||| |||||||| ||||||||| Sbjct: 292 ggcggcggcggtgggtacggaggcggtggcggc 324
>gb|AC133181.2| Mus musculus BAC clone RP24-169F11 from 8, complete sequence Length = 140384 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccg 557 ||||||||||||||| |||||| || |||||||||||||| Sbjct: 118923 ggcggcggcggtggcggcggaggcggaggcggcggcggccg 118883
>ref|NM_188297.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 765 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcgag 561 |||||||||||||||||||||| ||||| Sbjct: 585 cggaggaggtggcggcggcggcggcgag 558
>ref|NM_190033.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 342 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccgcga 560 ||||||||||||||| ||||||||| || ||||||||| |||| Sbjct: 238 ggcggcggcggtggcggcggaggaggaggaggcggcggcggcga 281
>gb|BT018002.1| Zea mays clone EL01N0526H03.c mRNA sequence Length = 765 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||||| || ||| ||||||||||| Sbjct: 351 ggcggcggtggctacggcggcggtcgcggcggcggc 386 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 515 agggcggcggcggtggctacggaggaggtggcggc 549 |||| |||||||| ||||||||||| ||||||||| Sbjct: 454 agggtggcggcggcggctacggaggcggtggcggc 488
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 91 tggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgaggacctc 150 |||||||||| |||||| || | |||||||||||| ||||| || || |||| |||||| Sbjct: 2811734 tggttcaacgacaccaaaggctacggcttcatctctccggatgatggtggcgatgacctc 2811793 Query: 151 ttcg 154 |||| Sbjct: 2811794 ttcg 2811797
>gb|AE009135.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 161 of 256 of the complete sequence Length = 11907 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 84 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 |||||| |||||| ||||| ||||||| |||||||||||| Sbjct: 8495 cgtgaaatggttcgacgtcgccaagggtttcggcttcatc 8534
>emb|AJ249323.1|CIN249323 Ciona intestinalis mRNA for glycine rich RNA binding protein (rgc gene) Length = 671 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcggcgg 554 ||||||||||||||||| ||||| |||||||| Sbjct: 349 ggcggtggctacggaggtggtggtggcggcgg 380
>ref|NM_001032596.1| Ciona intestinalis glycine rich RNA binding protein (RGC), mRNA Length = 671 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 523 ggcggtggctacggaggaggtggcggcggcgg 554 ||||||||||||||||| ||||| |||||||| Sbjct: 349 ggcggtggctacggaggtggtggtggcggcgg 380
>emb|X12564.1|ZMGRP Maize ABA-inducible gene for glycine-rich protein ( ABA = abscisic acid) Length = 1114 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||||| || ||| ||||||||||| Sbjct: 607 ggcggcggtggctacggcggcggtcgcggcggcggc 642
>gb|DQ397574.1| Cenarchaeum symbiosum clone C09E09, complete sequence Length = 42577 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 516 gggcggcggcggtggctacggaggaggtggcggcggcggc 555 |||||||||||||||| ||||||||| || ||||||||| Sbjct: 910 gggcggcggcggtggcggcggaggaggagggggcggcggc 871
>gb|AE012336.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 244 of 460 of the complete genome Length = 10286 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 84 cgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||||||||||||| | ||||||| |||||||||||| ||||||| Sbjct: 4466 cgtgaagtggttcaatgatgccaagggcttcggcttcatcaccccgga 4419
>gb|AE012242.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 150 of 460 of the complete genome Length = 10405 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 84 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||| ||||||| |||||||||||| Sbjct: 2162 cgtgaagtggttcaacgatgccaagggcttcggcttcatc 2201
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||| ||||| ||||||| |||||||||||| Sbjct: 1968616 aagtggttcgacgtcgccaagggcttcggcttcatc 1968651 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcat 122 ||||||||||||| |||||||| ||||||||||| Sbjct: 582446 aagtggttcaacgcaaccaagggcttcggcttcat 582480 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||| | ||||||||| || ||||||||| Sbjct: 1224150 aagtggttcaatggcaccaagggttttggcttcatc 1224185
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 84 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 |||||| |||||| ||||| ||||||| |||||||||||| Sbjct: 1788340 cgtgaaatggttcgacgtcgccaagggtttcggcttcatc 1788379
>gb|U32310.1|TAU32310 Triticum aestivum single-stranded nucleic acid binding protein (whGRP-1) gene, complete cds Length = 937 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggc 552 ||||||||||| ||||||||||| || ||||||||| Sbjct: 422 ggcggcggcggcggctacggaggcggcggcggcggc 457 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggc 549 ||||||||||| |||||||| || ||||||||| Sbjct: 515 ggcggcggcggcggctacggcggtggtggcggc 547
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccgcga 560 ||||||||||||||| ||||||||| || ||||||||| |||| Sbjct: 126679 ggcggcggcggtggcggcggaggaggaggaggcggcggcggcga 126722
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccgcga 560 ||||||||||||||| ||||||||| || ||||||||| |||| Sbjct: 42998 ggcggcggcggtggcggcggaggaggaggaggcggcggcggcga 43041
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 134 acggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||||||||||| ||||| Sbjct: 39548 acggcggcgaggacctcttcgtccactagtcc 39579
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggccgcgag 561 |||||||||||||||||||||| ||||| Sbjct: 139668 cggaggaggtggcggcggcggcggcgag 139695
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggccgcgag 561 |||||||||||||||||||||| ||||| Sbjct: 8301 cggaggaggtggcggcggcggcggcgag 8328
>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0556A11 Length = 138096 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 134 acggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||||||||||| ||||| Sbjct: 106583 acggcggcgaggacctcttcgtccactagtcc 106614
>dbj|AK105157.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-H01, full insert sequence Length = 731 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccgcga 560 ||||||||||||||| ||||||||| || ||||||||| |||| Sbjct: 151 ggcggcggcggtggcggcggaggaggaggaggcggcggcggcga 108
>ref|NM_120029.2| Arabidopsis thaliana GRP2; nucleic acid binding AT4G38680 (GRP2) mRNA, complete cds Length = 1299 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 395 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 454 Query: 166 gccatca 172 |||||| Sbjct: 455 tccatca 461 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 791 ggcggcggtggctacggaggtggaggcgg 819
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcgg 551 |||||||||||||| ||||| || ||||||||||| Sbjct: 17393 ggcggcggcggtggttacggcggcggtggcggcgg 17427 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcgg 551 |||||||||||||| ||||| || ||||||||||| Sbjct: 17339 ggcggcggcggtggttacggcggcggtggcggcgg 17373 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcgg 554 |||||||| ||||||||||| || || ||||||||||| Sbjct: 17366 ggcggcggtggtggctacggcggtggcggcggcggcgg 17403
>ref|NM_195954.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0075K12.3), mRNA Length = 657 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 533 acggaggaggtggcggcggcggccgcg 559 |||||||||| |||||||||||||||| Sbjct: 86 acggaggaggcggcggcggcggccgcg 112
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 128 ||||| ||||||||||||| |||||||| || || ||||||||||| Sbjct: 1641277 accgtcaagtggttcaacgaaaccaagggctttggtttcatctcccc 1641323 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggccgcg 559 ||||||||| ||||||||||||||| Sbjct: 172530 ggaggaggtcgcggcggcggccgcg 172554
>ref|XM_472593.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 516 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 197 ggcggcggcggtggcggcggcggtggtggcggcggcggc 159
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 28243 ggcggcggcggtggcggcggcggcggtggcggcggcggc 28281
>gb|AY022915.1| Oryza sativa microsatellite MRG5240 containing (CGT)X10, genomic sequence Length = 230 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 533 acggaggaggtggcggcggcggccgcg 559 |||||||||| |||||||||||||||| Sbjct: 137 acggaggaggcggcggcggcggccgcg 163
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 84 cgtgaagtggttcaacgtcaccaaggggttcggcttcat 122 ||||||||||||||||| | ||||||| | ||||||||| Sbjct: 1256698 cgtgaagtggttcaacgacgccaagggctacggcttcat 1256736 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 516 gggcggcggcggtggctacggaggaggtggcggcgg 551 ||||||||||||||| |||| || ||||||||||| Sbjct: 2248174 gggcggcggcggtggtaacggtgggggtggcggcgg 2248139
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 533 acggaggaggtggcggcggcggccgcg 559 |||||||||| |||||||||||||||| Sbjct: 77892 acggaggaggcggcggcggcggccgcg 77866
>gb|AE009243.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 13 of 187 of the complete sequence Length = 11036 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcat 122 |||||||| |||| ||||||||| ||||||||||| Sbjct: 164 aagtggtttaacgccaccaagggcttcggcttcat 198
>gb|AE008371.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 175 of 187 of the complete sequence Length = 11967 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcat 122 |||||||| |||| ||||||||| ||||||||||| Sbjct: 1308 aagtggtttaacgccaccaagggcttcggcttcat 1274
>gb|BC065149.1| Mus musculus CXXC finger 4, mRNA (cDNA clone IMAGE:6853043), partial cds Length = 5216 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| ||||| |||||||||||| Sbjct: 659 ggcggcggcggtggcagcggcggaggcggcggcggcggc 697 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcg 559 ||||||||| |||||||||||||||| Sbjct: 614 cggaggaggaggcggcggcggccgcg 589
>gb|AY728266.1| Trypanosoma cruzi voucher Dm28c zinc finger protein 7 (zinc7) gene, partial cds; and zinc finger protein 8 (zinc8), heavy chain clathrin (claH), and alpha6 proteasome subunit (pr29A) genes, complete cds Length = 14737 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgc 510 |||||||| ||| || |||||||||||||||||| | |||||| Sbjct: 3844 gtgctacaggtgtggagaggagggccacatctcccgcgactgc 3886
>ref|XM_126724.8| PREDICTED: Mus musculus fetal Alzheimer antigen, transcript variant 1 (Falz), mRNA Length = 11492 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 119 ggcggcggcggtggcggcggcggtggtggcggcggcggc 81
>ref|XM_903112.2| PREDICTED: Mus musculus fetal Alzheimer antigen, transcript variant 3 (Falz), mRNA Length = 9106 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 119 ggcggcggcggtggcggcggcggtggtggcggcggcggc 81
>ref|XM_797579.1| Trypanosoma cruzi strain CL Brener poly-zinc finger protein 2 (Tc00.1047053509731.10) partial mRNA Length = 579 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgc 510 |||||||| ||| || |||||||||||||||||| | |||||| Sbjct: 216 gtgctacaggtgtggagaggagggccacatctcccgcgactgc 258
>ref|XM_804990.1| Trypanosoma cruzi strain CL Brener poly-zinc finger protein 2 (Tc00.1047053507639.10) partial mRNA Length = 579 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatctccagggactgc 510 |||||||| ||| || |||||||||||||||||| | |||||| Sbjct: 216 gtgctacaggtgtggagaggagggccacatctcccgcgactgc 258
>gb|AC164408.4| Mus musculus chromosome 3, clone RP23-384A11, complete sequence Length = 202604 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| ||||| |||||||||||| Sbjct: 45272 ggcggcggcggtggcagcggcggaggcggcggcggcggc 45310
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 27083 ggcggcggcggtggcggcggcggcggtggcggcggcggc 27121
>gb|AY040049.1| Arabidopsis thaliana putative glycine-rich protein 2 (At4g38680) mRNA, complete cds Length = 612 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 64 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 123 Query: 166 gccatca 172 |||||| Sbjct: 124 tccatca 130 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 460 ggcggcggtggctacggaggtggaggcgg 488
>gb|AF360202.1| Arabidopsis thaliana putative glycine-rich protein GRP2 (At4g38680) mRNA, complete cds Length = 929 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 138 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 197 Query: 166 gccatca 172 |||||| Sbjct: 198 tccatca 204 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 534 ggcggcggtggctacggaggtggaggcgg 562
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Plus Query: 77 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 136 ||||||| |||||||||||||||| || || |||||||||||| | |||||||||| Sbjct: 285659 agggaactgtgaagtggttcaacgctgaaaaaggtttcggcttcatcgctccggaggacg 285718 Query: 137 gcagcgaggacctcttcgtccac 159 || || ||| ||||||||||| Sbjct: 285719 gctccgctgacgtcttcgtccac 285741
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 46.1 bits (23), Expect = 0.12 Identities = 77/95 (81%) Strand = Plus / Minus Query: 79 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggc 138 |||||||||||||||||||||| | ||||| || || |||||| ||| ||| | |||| Sbjct: 96494 ggaaccgtgaagtggttcaacgccgaaaagggctttggtttcatcgcccaggaaggcggc 96435 Query: 139 agcgaggacctcttcgtccaccagtccgccatcaa 173 || |||| ||||||||||| | ||||| ||||| Sbjct: 96434 ggcccggacgtcttcgtccactactccgcgatcaa 96400
>emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chromosome 11 Contains the 5' end of the Mtmr3 gene for myotubularin related protein 3, two novel genes, the gene for a novel protein similar to human ASC-1 complex subunit P100, the gene for a novel protein similar to human ubiquinol-cytochrome C reductase complex 7.2 kDa protein UQCR10, the Cabp7 gene for calcium binding protein 7, the 3' end of the Nf2 gene for neurofibromatosis 2 and two CpG islands, complete sequence Length = 233997 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 164903 ggcggcggcggtggcggcggcggcggtggcggcggcggc 164865
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 181730 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 181671 Query: 166 gccatca 172 |||||| Sbjct: 181670 tccatca 181664 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 181334 ggcggcggtggctacggaggtggaggcgg 181306
>emb|AL035656.1|ATT9A14 Arabidopsis thaliana DNA chromosome 4, BAC clone T9A14 (ESSA project) Length = 88164 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 19357 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 19298 Query: 166 gccatca 172 |||||| Sbjct: 19297 tccatca 19291 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 18961 ggcggcggtggctacggaggtggaggcgg 18933
>emb|AJ441311.1|ROB441311 Rumex obtusifolius mRNA for putative glycine rich protein (grp gene) Length = 792 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcgg 551 |||||||||||||||||||| || || |||||||| Sbjct: 361 ggcggcggcggtggctacggtggtggcggcggcgg 395
>emb|AJ245939.1|RCO245939 Ricinus communis mRNA for glycine-rich RNA-binding protein (grp1 gene) Length = 750 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggagg 539 ||||||||||||||||||||||| Sbjct: 395 ggcggcggcggtggctacggagg 417
>emb|AJ010294.1|BLA010294 Branchiostoma lanceolatum mRNA for intermediate filament protein E1 Length = 1909 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||| |||| |||||| || |||||||||||| Sbjct: 298 ggcggcggcggcggcttcggaggcggcggcggcggcggc 336
>gb|AC119840.12| Mus musculus chromosome 3, clone RP24-112E5, complete sequence Length = 206159 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| ||||| |||||||||||| Sbjct: 6754 ggcggcggcggtggcagcggcggaggcggcggcggcggc 6792
>gb|AY133591.1| Arabidopsis thaliana AT4g38680/F20M13_240 mRNA, complete cds Length = 612 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 64 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 123 Query: 166 gccatca 172 |||||| Sbjct: 124 tccatca 130 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 460 ggcggcggtggctacggaggtggaggcgg 488
>tpg|BK005076.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 73 (WRKY73) gene, complete cds Length = 3115 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggccg 557 ||||||||||||||||||||||| Sbjct: 2509 ggaggaggtggcggcggcggccg 2487
>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome unknown, complete sequence Length = 199332 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||| ||| ||||||||| |||||||||||| Sbjct: 145044 ggcggcggcggcggcggcggaggaggaggcggcggcggc 145082
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 533 acggaggaggtggcggcggcggccgcg 559 |||||||||| |||||||||||||||| Sbjct: 17664 acggaggaggcggcggcggcggccgcg 17638
>gb|S47408.1| glycine-rich protein {clone atGRP-2} [Arabidopsis thaliana, C24, mRNA, 965 nt] Length = 965 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 119 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 178 Query: 166 gccatca 172 |||||| Sbjct: 179 tccatca 185 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 515 ggcggcggtggctacggaggtggaggcgg 543
>gb|AF385696.1|AF385696 Arabidopsis thaliana AT4g38680/F20M13_240 mRNA, complete cds Length = 1089 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 394 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 453 Query: 166 gccatca 172 |||||| Sbjct: 454 tccatca 460 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 790 ggcggcggtggctacggaggtggaggcgg 818
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 21794249 ggcggcggcggtggcggcggcggtggtggcggcggcggc 21794287 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccgcg 559 |||||||||||||||||||||| Sbjct: 25308474 ggaggtggcggcggcggccgcg 25308453 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccgcg 559 |||||||||||||||||||||| Sbjct: 25308312 ggaggtggcggcggcggccgcg 25308291
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 533 acggaggaggtggcggcggcggccgcg 559 |||||||||| |||||||||||||||| Sbjct: 10236339 acggaggaggcggcggcggcggccgcg 10236313 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 ggaggtggcggcggcggccgc 558 ||||||||||||||||||||| Sbjct: 19647372 ggaggtggcggcggcggccgc 19647392 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 18724882 ggaggaggtggcggcggcggc 18724862 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggc 552 ||||| ||||| |||||||||||||| |||||||| Sbjct: 21267175 ggcggaggcggcggctacggaggaggcagcggcggc 21267210 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggccgcgag 561 ||||||||| |||||||||||| ||||| Sbjct: 16558049 cggaggaggcggcggcggcggcggcgag 16558076
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggccg 557 ||||||||||||||||||||||| Sbjct: 2431640 ggaggaggtggcggcggcggccg 2431618 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggcc 556 |||||||||||||||||||||| Sbjct: 7031345 ggaggaggtggcggcggcggcc 7031324 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggc 552 ||||| |||||||||||||| ||||| |||||| Sbjct: 30641734 ggcggtggtggctacggaggtggtggtggcggc 30641766 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcgag 561 ||||| |||||||||||||||| ||||| Sbjct: 23931332 cggagaaggtggcggcggcggcggcgag 23931305 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtggcgg 548 ||||||||||| |||||||| || |||||||| Sbjct: 20660070 ggcggcggcggcggctacggtggcggtggcgg 20660039 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcgag 561 ||||||||| |||||||||||| ||||| Sbjct: 1045818 cggaggaggaggcggcggcggcggcgag 1045791 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcgag 561 ||||||||| |||||||||||| ||||| Sbjct: 959452 cggaggaggaggcggcggcggcggcgag 959425
>gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete sequence Length = 132549 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 129 ggaggacggcagcgaggacctcttcgt 155 ||||||||| ||||||||||||||||| Sbjct: 1716 ggaggacgggagcgaggacctcttcgt 1690
>gb|AC016945.22| Homo sapiens 3 BAC RP11-31L6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 96001 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggccgcgagtg 563 ||||||||||||||| ||| || || |||||||||||| ||||||| Sbjct: 65868 ggcggcggcggtggcggcggcggcggcggcggcggcggcggcgagtg 65914
>gb|AC069327.7|AC069327 Genomic Sequence For Arabidopsis thaliana Clone T26G08 From Chromosome IV, complete sequence Length = 94770 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 61546 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 61605 Query: 166 gccatca 172 |||||| Sbjct: 61606 tccatca 61612 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 61942 ggcggcggtggctacggaggtggaggcgg 61970
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 449291 ggcggcggcggtggcggcggcggcggtggcggcggcggc 449253
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggccg 557 ||||||||||||||||||||||| Sbjct: 63098 ggaggaggtggcggcggcggccg 63076
>dbj|AK111212.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-A09, full insert sequence Length = 2284 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 519 cggcggcggtggctacggaggaggtggcggcggcg 553 |||||||||||| ||||||||||||| ||||||| Sbjct: 355 cggcggcggtggttacggaggaggtgctggcggcg 389
>gb|AY104594.1| Zea mays PCO132268 mRNA sequence Length = 750 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 469 tgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcggcggt 528 |||||||| |||||| ||| |||||||| |||||||||||||| || ||||||||| Sbjct: 114 tgctacaactgcggccaggccggccacatggccagggactgccccagcggtggcggcggt 173 Query: 529 ggc 531 ||| Sbjct: 174 ggc 176 Score = 42.1 bits (21), Expect = 1.9 Identities = 74/91 (81%), Gaps = 3/91 (3%) Strand = Plus / Plus Query: 464 gtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggcg 523 |||| |||| |||||| |||||| |||||||| ||||||||||| || |||||| Sbjct: 16 gtggctgcttcaagtgtggcgagcctggccacatggccagggactgctcc---agcggcg 72 Query: 524 gcggtggctacggaggaggtggcggcggcgg 554 |||| |||||||| || || ||||||||||| Sbjct: 73 gcggcggctacggcggtggcggcggcggcgg 103
>gb|AC157487.1| Genomic sequence for Zea mays clone ZMMBBb0614J24, from chromosome 8, complete sequence Length = 136932 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 129 ggaggacggcagcgaggacctcttcgt 155 ||||||||| ||||||||||||||||| Sbjct: 90037 ggaggacgggagcgaggacctcttcgt 90011
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 533 acggaggaggtggcggcggcggccgcg 559 |||||||||| |||||||||||||||| Sbjct: 10242378 acggaggaggcggcggcggcggccgcg 10242352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 ggaggtggcggcggcggccgc 558 ||||||||||||||||||||| Sbjct: 19658632 ggaggtggcggcggcggccgc 19658652 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 18735735 ggaggaggtggcggcggcggc 18735715 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggc 552 ||||| ||||| |||||||||||||| |||||||| Sbjct: 21278439 ggcggaggcggcggctacggaggaggcagcggcggc 21278474 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggccgcgag 561 ||||||||| |||||||||||| ||||| Sbjct: 16566290 cggaggaggcggcggcggcggcggcgag 16566317
>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone F20M13 (ESSA project) Length = 91938 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 106 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 165 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 82671 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 82612 Query: 166 gccatca 172 |||||| Sbjct: 82611 tccatca 82605 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 520 ggcggcggtggctacggaggaggtggcgg 548 |||||||||||||||||||| || ||||| Sbjct: 82275 ggcggcggtggctacggaggtggaggcgg 82247
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 105866 ggcggcggcggtggcggcggcggtggtggcggcggcggc 105904
>gb|L41167.1|ARGCSP Arthrobacter globiformis strain SI55 cold shock protein (CSP) gene, complete cds Length = 914 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 77 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 |||||||||| ||||||||||||| ||||| |||||||||||| ||||||| Sbjct: 310 agggaaccgtcaagtggttcaacgctgaaaagggcttcggcttcatcaccccgga 364
>gb|U49482.1|HVU49482 Hordeum vulgare low temperature-responsive RNA-binding protein (blt801) mRNA, complete cds Length = 806 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggagg 539 ||||||||||||||||||||||| Sbjct: 409 ggcggcggcggtggctacggagg 431 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggc 552 ||||||||||| |||||||| || || ||||||||| Sbjct: 472 ggcggcggcggcggctacggcggcggcggcggcggc 507
>emb|AL596116.14| Mouse DNA sequence from clone RP23-317F9 on chromosome 11, complete sequence Length = 217735 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 110954 ggcggcggcggtggcggcggcggtggtggcggcggcggc 110992
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12, complete sequence Length = 88725 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| || ||||||||||||||| Sbjct: 78270 ggcggcggcggtggcggcggcggcggtggcggcggcggc 78308
>gb|M94390.1|LEIHEXBP Leishmania major HEXBP DNA binding protein (HEXBP) gene, complete cds Length = 1973 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacatc 498 |||||||||||||||||||| ||||||||| Sbjct: 1353 gtgctacaagtgcggcgaggccggccacatc 1383 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacat 497 ||||||||||||||||||| ||||||||| Sbjct: 1182 gtgctacaagtgcggcgagtcgggccacat 1211 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 tgcggcgaggagggccacat 497 |||||||||||||||||||| Sbjct: 733 tgcggcgaggagggccacat 752
>ref|XM_465592.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggc 555 |||||||||||||||||||||| Sbjct: 53 cggaggaggtggcggcggcggc 74
>ref|XM_450738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggc 555 |||||||||||||||||||||| Sbjct: 1313 cggaggaggtggcggcggcggc 1334
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||| ||||||||||| | | | ||||| |||||||||||| ||||||| Sbjct: 464543 accgtcaagtggttcaatgacgcaaagggcttcggcttcatcaccccgga 464494
>ref|XM_478701.1| Oryza sativa (japonica cultivar-group), mRNA Length = 822 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggccgcg 559 ||||||||| |||||||||||||||| Sbjct: 65 cggaggaggcggcggcggcggccgcg 90
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 |||||||| |||||||||| || || ||||||||||||||| Sbjct: 733316 accgtgaaatggttcaacgcaactaaagggttcggcttcatc 733357
>ref|XM_359492.1| Magnaporthe grisea 70-15 hypothetical protein (MG05285.4) partial mRNA Length = 3120 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 522 cggcggtggctacggaggaggtggcggcgg 551 ||||||||||||||| || ||||||||||| Sbjct: 1497 cggcggtggctacggcggcggtggcggcgg 1526
>gb|AY658323.1| Synthetic construct Peudomonas aeruginosa clone FLH044127.01F PA3266 gene, partial cds Length = 210 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||| || |||||||||| | |||| || |||||||||||| ||||||| Sbjct: 22 accgtaaaatggttcaacgacgccaaaggcttcggcttcatcaccccgga 71
>ref|XM_955512.1| Neurospora crassa OR74A hypothetical protein (NCU08923.1) partial mRNA Length = 552 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacat 497 |||||||||||||||||||| |||||||| Sbjct: 249 gtgctacaagtgcggcgaggtcggccacat 278
>ref|XM_331314.1| Neurospora crassa OR74A hypothetical protein (NCU08923.1) partial mRNA Length = 552 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 468 gtgctacaagtgcggcgaggagggccacat 497 |||||||||||||||||||| |||||||| Sbjct: 249 gtgctacaagtgcggcgaggtcggccacat 278
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||| ||||||||||||| |||||||| || ||||||||| Sbjct: 547592 accgtcaagtggttcaacgagaccaagggttttggcttcatc 547551
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 127 ||||| |||||||||||| | ||||||| |||||||| ||||||| Sbjct: 4329135 accgtaaagtggttcaacacctccaagggcttcggctttatctccc 4329180
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||| ||||||||||||| || ||| || || ||||||||| ||||||| Sbjct: 285259 accgttaagtggttcaacgacagcaaaggctttggcttcatcaccccgga 285210
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 caccggcgacgacgggcgcacc 249 |||||||||||||||||||||| Sbjct: 234327 caccggcgacgacgggcgcacc 234348
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 44.1 bits (22), Expect = 0.49 Identities = 36/40 (90%), Gaps = 3/40 (7%) Strand = Plus / Minus Query: 516 gggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||| ||| |||||||||||||||||| Sbjct: 102838 gggcggcggcggtgg---cggcggaggtggcggcggcggc 102802
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||| ||||||||||||| |||||||| || ||||||||| Sbjct: 1866879 accgtcaagtggttcaacgagaccaagggttttggcttcatc 1866838
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 caccggcgacgacgggcgcacc 249 |||||||||||||||||||||| Sbjct: 234521 caccggcgacgacgggcgcacc 234542
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||||| | ||||| |||||||||||| Sbjct: 187402 accgtgaagtggttcaacgccgaaaagggcttcggcttcatc 187443
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccgcg 559 |||||||||||||||||||||| Sbjct: 92413 ggaggtggcggcggcggccgcg 92392 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccgcg 559 |||||||||||||||||||||| Sbjct: 92251 ggaggtggcggcggcggccgcg 92230
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccgcg 559 |||||||||||||||||||||| Sbjct: 35033 ggaggtggcggcggcggccgcg 35012 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccgcg 559 |||||||||||||||||||||| Sbjct: 34871 ggaggtggcggcggcggccgcg 34850
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 127 |||||||||||||||||| | ||||||| ||||| || ||||||| Sbjct: 5507635 accgtgaagtggttcaacacctccaagggcttcggttttatctccc 5507680 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 gcccccagggcggcggcggt 528 |||||||||||||||||||| Sbjct: 6539420 gcccccagggcggcggcggt 6539439
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||| ||||||||||||| |||||||| || ||||||||| Sbjct: 916421 accgtcaagtggttcaacgagaccaagggttttggcttcatc 916462 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 519 cggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||| |||| || ||||||| ||||||| Sbjct: 769006 cggcggcggtggcgacggcggcggtggcgacggcggc 769042 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 519 cggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||| |||| || ||||||| ||||||| Sbjct: 768991 cggcggcggtggcgacggcggcggtggcgacggcggc 769027 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 519 cggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||| |||| || ||||||| ||||||| Sbjct: 768976 cggcggcggtggcgacggcggcggtggcgacggcggc 769012 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 519 cggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||| |||| || ||||||| ||||||| Sbjct: 768961 cggcggcggtggcgacggcggcggtggcgacggcggc 768997 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 519 cggcggcggtggctacggaggaggtggcggcggcgg 554 ||||||||||||| |||| || |||||||| ||||| Sbjct: 769021 cggcggcggtggcgacggcggcggtggcggtggcgg 769056
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 468 gtgctacaagtgcggcgaggagggccacat 497 |||||||||||| |||||||||| |||||| Sbjct: 24276343 gtgctacaagtgtggcgaggaggaccacat 24276314 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 518 gcggcggcggtggctacggaggaggtggcggcggcgg 554 |||||||||| ||| |||| ||||| ||||||||||| Sbjct: 18917016 gcggcggcggcggcgacggcggaggaggcggcggcgg 18917052 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 4206566 ggaggaggtggcggcggcggc 4206586 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacgg 536 |||||||||||||||||||| Sbjct: 27096932 ggcggcggcggtggctacgg 27096951
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcg 559 ||||||||| |||||||||||||||| Sbjct: 22294460 cggaggaggcggcggcggcggccgcg 22294435 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacggaggaggtgg 545 |||||||||||||||| |||||| ||||| Sbjct: 14771826 ggcggcggcggtggcttcggaggtggtgg 14771798 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 gatctagggtttcctgctagggttt 34 ||||||||||||| ||||||||||| Sbjct: 8032419 gatctagggtttcatgctagggttt 8032395 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccg 557 ||||||||| |||||||||||||| Sbjct: 26634611 cggaggaggcggcggcggcggccg 26634588 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 538 ggaggtggcggcggcggccgcgag 561 ||||| |||||||||||||||||| Sbjct: 22333266 ggaggcggcggcggcggccgcgag 22333289 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcgg 551 ||||||||||||| ||||||||| ||||||| Sbjct: 19476259 ggcggcggtggctttggaggaggtagcggcgg 19476290 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccg 557 |||||||||||||||||||| Sbjct: 14193494 ggaggtggcggcggcggccg 14193475 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ggcggcggcggtggctacgg 536 |||||||||||||||||||| Sbjct: 11386290 ggcggcggcggtggctacgg 11386271
>gb|AE004749.1| Pseudomonas aeruginosa PAO1, section 310 of 529 of the complete genome Length = 16841 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||| || |||||||||| | |||| || |||||||||||| ||||||| Sbjct: 1699 accgtaaaatggttcaacgacgccaaaggcttcggcttcatcaccccgga 1748
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcg 559 |||||| ||||||||||||||||||| Sbjct: 61139 cggaggtggtggcggcggcggccgcg 61114
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 534 cggaggaggtggcggcggcggccgcg 559 ||||||||| |||||||||||||||| Sbjct: 99706 cggaggaggcggcggcggcggccgcg 99681 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 538 ggaggtggcggcggcggccgcgag 561 ||||| |||||||||||||||||| Sbjct: 138512 ggaggcggcggcggcggccgcgag 138535
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggcc 556 |||||||||||||||||||||| Sbjct: 89099 ggaggaggtggcggcggcggcc 89078
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggcc 556 |||||||||||||||||||||| Sbjct: 52132 ggaggaggtggcggcggcggcc 52111
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggcc 556 |||||||||||||||||||||| Sbjct: 90772 ggaggaggtggcggcggcggcc 90751
>dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_A10 Length = 95161 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggagg 542 ||||||||||||||| |||||||||| Sbjct: 68010 ggcggcggcggtggcgacggaggagg 68035
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggc 555 |||||||||||||||||||||| Sbjct: 18141 cggaggaggtggcggcggcggc 18162
>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487H05 Length = 176057 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggc 555 |||||||||||||||||||||| Sbjct: 38558 cggaggaggtggcggcggcggc 38579
>dbj|AP005065.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0046H03 Length = 137020 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcggc 555 |||||||||||||||||||||| Sbjct: 96400 cggaggaggtggcggcggcggc 96421
>dbj|AK070785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065D10, full insert sequence Length = 1739 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggcc 556 |||||||||||||||||||||| Sbjct: 1166 ggaggaggtggcggcggcggcc 1187
>gb|AF098532.1|AF098532 Myxococcus xanthus CspE (cspE) gene, complete cds Length = 1067 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 123 ||||||||||||||||||| | | ||||| || ||||||||| Sbjct: 529 accgtgaagtggttcaacgacgcgaagggctttggcttcatc 570
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttcatctc 125 ||||||||||||| | ||||||| || ||||||||||| Sbjct: 2675430 aagtggttcaacgacgccaagggttttggcttcatctc 2675467
>dbj|AK066978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P22, full insert sequence Length = 2958 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggcc 556 |||||||||||||||||||||| Sbjct: 2565 ggaggaggtggcggcggcggcc 2586
>gb|U82822.1|PAU82822 Pseudomonas aeruginosa major cold shock protein CspA (cspA) gene, complete cds Length = 508 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 131 ||||| || |||||||||| | |||| || |||||||||||| ||||||| Sbjct: 262 accgtaaaatggttcaacgacgccaaaggcttcggcttcatcaccccgga 311
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 468 gtgctacaagtgcggcgaggagggccacat 497 |||||||||||| |||||||||| |||||| Sbjct: 24204549 gtgctacaagtgtggcgaggaggaccacat 24204520 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 518 gcggcggcggtggctacggaggaggtggcggcggcgg 554 |||||||||| ||| |||| ||||| ||||||||||| Sbjct: 18843243 gcggcggcggcggcgacggcggaggaggcggcggcgg 18843279 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 4206553 ggaggaggtggcggcggcggc 4206573 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacgg 536 |||||||||||||||||||| Sbjct: 27022528 ggcggcggcggtggctacgg 27022547
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135793 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 468 gtgctacaagtgcggcgaggagggccacat 497 |||||||||||| |||||||||| |||||| Sbjct: 53117 gtgctacaagtgtggcgaggaggaccacat 53088
>ref|XM_481229.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 111 ggaggaggtggcggcggcggc 131
>ref|XM_483574.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1408 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggccgcg 559 |||||||| |||||||||||||||| Sbjct: 215 ggaggaggaggcggcggcggccgcg 239
>ref|XM_467217.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1557 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 ggaggtggcggcggcggccgc 558 ||||||||||||||||||||| Sbjct: 24 ggaggtggcggcggcggccgc 4
>ref|XM_466577.1| Oryza sativa (japonica cultivar-group), mRNA Length = 504 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 122 ggaggaggtggcggcggcggc 142
>ref|XM_519598.1| PREDICTED: Pan troglodytes similar to Tnks protein (LOC463980), mRNA Length = 1128 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 98 ggaggaggtggcggcggcggc 78
>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940136D9, complete sequence Length = 121820 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 84 cgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcag 140 |||||||||||||||| | |||||||||||||||||| | || || |||||||| Sbjct: 66072 cgtgaagtggttcaactccgagaaggggttcggcttcatcgctcccgaagacggcag 66016
>ref|XM_450391.1| Oryza sativa (japonica cultivar-group), mRNA Length = 765 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 463 cgtgggtgctacaagtgcggcgaggagggccacatctccagggactgcccccagggcggc 522 |||| |||||||| ||| || ||||||||||||| ||||||||||| || ||| |||| Sbjct: 93 cgtgtgtgctacatgtgtggtgaggagggccacaaggccagggactgctcctaggacggc 152 Query: 523 g 523 | Sbjct: 153 g 153
>ref|NM_197231.1| Oryza sativa (japonica cultivar-group) putative RNA helicase (OSJNBb0073N24.12), mRNA Length = 2063 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 106 ggaggaggtggcggcggcggc 126
>ref|NM_197399.1| Oryza sativa (japonica cultivar-group) putative Oxa1 protein (OSJNBb0018B10.22), mRNA Length = 1464 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 ggaggtggcggcggcggccgc 558 ||||||||||||||||||||| Sbjct: 336 ggaggtggcggcggcggccgc 356
>ref|XM_517618.1| PREDICTED: Pan troglodytes similar to Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3) (LOC461706), mRNA Length = 1803 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 1539 ggaggaggtggcggcggcggc 1519
>ref|NM_183680.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 687 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 426 ggaggaggtggcggcggcggc 406
>ref|XM_517386.1| PREDICTED: Pan troglodytes similar to T-cell receptor alpha enhancer-binding protein, short form - human (LOC461425), mRNA Length = 2169 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcgg 554 ||||||||||||||||||||| Sbjct: 921 cggaggaggtggcggcggcgg 941
>gb|BT017120.1| Zea mays clone EL01N0364D08.c mRNA sequence Length = 556 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggc 552 |||||||| |||||||| || |||||||||||| Sbjct: 351 ggcggcggcggctacggtggtggtggcggcggc 383
>ref|NM_189995.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1533 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 ggaggtggcggcggcggccgc 558 ||||||||||||||||||||| Sbjct: 177 ggaggtggcggcggcggccgc 197
>ref|XM_477841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1269 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 517 ggcggcggcggtggctacggaggaggtgg 545 |||||||||||||||| |||||| ||||| Sbjct: 220 ggcggcggcggtggcttcggaggtggtgg 248
>gb|BT017410.1| Zea mays clone EL01N0330H11.c mRNA sequence Length = 884 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggc 552 |||||||| |||||||| || |||||||||||| Sbjct: 462 ggcggcggcggctacggtggtggtggcggcggc 494
>gb|BT016348.1| Zea mays clone Contig181 mRNA sequence Length = 866 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 520 ggcggcggtggctacggaggaggtggcggcggc 552 |||||||| |||||||| || |||||||||||| Sbjct: 467 ggcggcggcggctacggtggtggtggcggcggc 499
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 20302 ggaggaggtggcggcggcggc 20282
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 519 cggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||| |||||| || |||||||||||| Sbjct: 52790 cggcggcggtggcgccggagggggaggcggcggcggc 52754
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.9 Identities = 60/73 (82%) Strand = Plus / Minus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||| ||||||||||||| | ||||||| || || |||||| | ||||| | |||| || Sbjct: 2881730 accgtcaagtggttcaacgacgccaagggttttggtttcatcacgccggaaggcggcggc 2881671 Query: 142 gaggacctcttcg 154 || || ||||||| Sbjct: 2881670 gaagatctcttcg 2881658
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 8592 ggaggaggtggcggcggcggc 8572
>gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete sequence Length = 172393 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 80805 ggaggaggtggcggcggcggc 80825
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Minus Query: 77 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 136 ||||||| |||||||||||||||| |||||||||||||| ||| |||| || |||| Sbjct: 4080766 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccccgaagacg 4080707 Query: 137 g 137 | Sbjct: 4080706 g 4080706 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 accggcgacgacgggcgcacc 249 ||||||||||||||||||||| Sbjct: 234440 accggcgacgacgggcgcacc 234460
>gb|AC010707.17| Drosophila melanogaster clone BACR06P10, complete sequence Length = 176969 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcgg 554 ||||||||||||||||||||| Sbjct: 133759 cggaggaggtggcggcggcgg 133779
>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence Length = 192540 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcgg 554 ||||||||||||||||||||| Sbjct: 36323 cggaggaggtggcggcggcgg 36343
>gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complete sequence Length = 56858 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 515 agggcggcggcggtggctacggaggaggtggcggcggcggc 555 ||||||||||||||||| |||| ||||||||||||||| Sbjct: 42302 agggcggcggcggtggcggtggagagggtggcggcggcggc 42342
>ref|XM_588880.2| PREDICTED: Bos taurus similar to RNA-binding protein LIN-28 (LOC539705), mRNA Length = 606 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 88 aagtggttcaacgtcaccaaggggttcggcttc 120 |||||||||||||| ||| ||||||||||||| Sbjct: 109 aagtggttcaacgtgcccatggggttcggcttc 141
>ref|XM_869383.1| PREDICTED: Bos taurus similar to TSPY-like 2 (LOC617179), mRNA Length = 3452 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 884 ggaggaggtggcggcggcggc 864
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.9 Identities = 60/73 (82%) Strand = Plus / Plus Query: 82 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 141 ||||| ||||||||||||| | ||||||| || || |||||| | ||||| | |||| || Sbjct: 3931685 accgtcaagtggttcaacgacgccaagggttttggtttcatcacgccggaaggcggcggc 3931744 Query: 142 gaggacctcttcg 154 || || ||||||| Sbjct: 3931745 gaagatctcttcg 3931757
>gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome 17, complete sequence Length = 203971 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggaggaggtggcggcggcggc 555 ||||||||||||||||||||| Sbjct: 57216 ggaggaggtggcggcggcggc 57236
>gb|BC040559.1| Homo sapiens lymphoid enhancer-binding factor 1, mRNA (cDNA clone MGC:41818 IMAGE:5269696), complete cds Length = 2349 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 cggaggaggtggcggcggcgg 554 ||||||||||||||||||||| Sbjct: 37 cggaggaggtggcggcggcgg 57 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,298,304 Number of Sequences: 3902068 Number of extensions: 3298304 Number of successful extensions: 126531 Number of sequences better than 10.0: 612 Number of HSP's better than 10.0 without gapping: 648 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 107394 Number of HSP's gapped (non-prelim): 18975 length of query: 567 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 544 effective length of database: 17,143,297,704 effective search space: 9325953950976 effective search space used: 9325953950976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
