ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49c11 |
|---|---|
| Clone Library Name | barley_pub |
>SMT2_ORYSA (O82427) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143)| (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) Length = 363 Score = 158 bits (400), Expect = 3e-39 Identities = 72/80 (90%), Positives = 78/80 (97%) Frame = +1 Query: 1 KRAVDLKMGSITRDKVQDKYTQYWSFFRPPQETATTQASADQVPAFVDTFYNLVTDIYEW 180 KRAVDLKMGSIT DKV+DKYTQYWSFFR P+ETATT+ASA++VPAFVDTFYNLVTDIYEW Sbjct: 33 KRAVDLKMGSITNDKVKDKYTQYWSFFRRPKETATTEASAEKVPAFVDTFYNLVTDIYEW 92 Query: 181 GWGQSFHFSPSLPGRSHRDA 240 GWGQSFHFSPSLPGRSHR+A Sbjct: 93 GWGQSFHFSPSLPGRSHREA 112
>SMT2_ARATH (Q39227) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143)| (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) Length = 361 Score = 127 bits (320), Expect = 6e-30 Identities = 59/80 (73%), Positives = 67/80 (83%) Frame = +1 Query: 1 KRAVDLKMGSITRDKVQDKYTQYWSFFRPPQETATTQASADQVPAFVDTFYNLVTDIYEW 180 KRAVDL GSI+ +KVQD Y QYWSFFR P+E T A++VP FVDTFYNLVTDIYEW Sbjct: 32 KRAVDLSGGSISAEKVQDNYKQYWSFFRRPKEIET----AEKVPDFVDTFYNLVTDIYEW 87 Query: 181 GWGQSFHFSPSLPGRSHRDA 240 GWGQSFHFSPS+PG+SH+DA Sbjct: 88 GWGQSFHFSPSIPGKSHKDA 107
>SMT3B_ARATH (Q94JS4) 24-methylenesterol C-methyltransferase 3 (EC 2.1.1.143)| (24-sterol C-methyltransferase 3) (Sterol-C-methyltransferase 3) Length = 359 Score = 118 bits (296), Expect = 4e-27 Identities = 55/80 (68%), Positives = 64/80 (80%) Frame = +1 Query: 1 KRAVDLKMGSITRDKVQDKYTQYWSFFRPPQETATTQASADQVPAFVDTFYNLVTDIYEW 180 KRA DL GSI+ +KV+D Y QYWSFFR P+E SA++VP FVDTFYNLVTDIYEW Sbjct: 32 KRASDLSGGSISAEKVKDNYNQYWSFFRKPKEIE----SAEKVPDFVDTFYNLVTDIYEW 87 Query: 181 GWGQSFHFSPSLPGRSHRDA 240 GWGQSFHFSP +PG+S +DA Sbjct: 88 GWGQSFHFSPHVPGKSDKDA 107
>SMT1_ORYSA (Q6ZIX2) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41)| (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) Length = 344 Score = 50.8 bits (120), Expect = 9e-07 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Frame = +1 Query: 25 GSITRDKVQ---DKYTQYWSFFRPPQETATTQASADQVPAFVDTFYNLVTDIYEWGWGQS 195 G IT+D+V+ D+Y +Y ++ +E A V+ +Y+L T YE+GWG+S Sbjct: 15 GKITKDEVKSAVDEYEKYHGYYGGKEE-----ARKSNYTDMVNKYYDLATSFYEYGWGES 69 Query: 196 FHFSPSLPGRSHRDA 240 FHF+ G S R++ Sbjct: 70 FHFAHRWNGESLRES 84
>ERG6_MAGGR (Q5EN22) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 390 Score = 50.4 bits (119), Expect = 1e-06 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Frame = +1 Query: 52 DKYTQYWSFFRPPQETATT--QASADQVPAFVDTFYNLVTDIYEWGWGQSFHFSPSLPGR 225 D+Y ++W ET + AD +YNLVTD YE+GWGQSFHF PG Sbjct: 55 DQYFRHWDGKTAKTETTKVREERKADYA-TLTRQYYNLVTDFYEYGWGQSFHFCTFAPGE 113 Query: 226 SHRDA 240 + A Sbjct: 114 TFASA 118
>ERG6_NEUCR (Q9P3R1) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 379 Score = 48.9 bits (115), Expect = 3e-06 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Frame = +1 Query: 16 LKMGSITRDKVQDKYTQYWSFFRPPQET-ATTQASADQVPAFVDTFYNLVTDIYEWGWGQ 192 LK + + D+Y +++ ET A +A + +YNL TDIYE+GWGQ Sbjct: 37 LKKNTEAQQIAVDEYFKHFDNKTAEAETQADREARTKEYATLTRHYYNLATDIYEYGWGQ 96 Query: 193 SFHFSPSLPGRSHRDA 240 FHF PG S A Sbjct: 97 CFHFCRYSPGESFYQA 112
>ERG6_YARLI (Q6C2D9) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 381 Score = 48.9 bits (115), Expect = 3e-06 Identities = 22/49 (44%), Positives = 26/49 (53%) Frame = +1 Query: 94 ETATTQASADQVPAFVDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHRDA 240 E A Q + +YNLVTD YE+GWG SFHFS G + R A Sbjct: 64 EDADEQGRIEDYAGLTKHYYNLVTDFYEYGWGSSFHFSRYYKGEAFRQA 112
>ERG6_CLALS (Q875K1) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 375 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/40 (50%), Positives = 24/40 (60%) Frame = +1 Query: 121 DQVPAFVDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHRDA 240 D + +YNLVTD YE+GWG SFHFS G + R A Sbjct: 67 DDYSSLTKNYYNLVTDFYEYGWGSSFHFSRYYKGEAFRQA 106
>ERG6_SCHPO (O14321) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 378 Score = 48.1 bits (113), Expect = 6e-06 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%) Frame = +1 Query: 40 DKVQDKYTQYWSFFRPPQETATTQASADQVPAF---VDTFYNLVTDIYEWGWGQSFHFSP 210 D+ K +Y+ F+ E + + A ++ + V+++Y+L TD+YE+GW QSFHFS Sbjct: 39 DEQSRKLQEYFEFWDRNHENESEEDRARRIDGYKSVVNSYYDLATDLYEYGWSQSFHFSR 98 Query: 211 SLPGRS 228 G + Sbjct: 99 FYKGEA 104
>ERG6_CANAL (O74198) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 376 Score = 46.6 bits (109), Expect = 2e-05 Identities = 19/31 (61%), Positives = 22/31 (70%) Frame = +1 Query: 148 FYNLVTDIYEWGWGQSFHFSPSLPGRSHRDA 240 +YNLVTD YE+GWG SFHFS G + R A Sbjct: 76 YYNLVTDFYEYGWGSSFHFSRYYKGEAFRQA 106
>ERG6_DEBHA (Q6BRB7) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 377 Score = 46.6 bits (109), Expect = 2e-05 Identities = 19/31 (61%), Positives = 22/31 (70%) Frame = +1 Query: 148 FYNLVTDIYEWGWGQSFHFSPSLPGRSHRDA 240 +YNLVTD YE+GWG SFHFS G + R A Sbjct: 77 YYNLVTDFYEYGWGSSFHFSRYYTGEAFRQA 107
>SMT1_ARATH (Q9LM02) Cycloartenol-C-24-methyltransferase (EC 2.1.1.41)| (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) (STEROL METHYLTRANSFERASE 1) (CEPHALOPOD protein) Length = 336 Score = 44.3 bits (103), Expect = 9e-05 Identities = 22/63 (34%), Positives = 33/63 (52%) Frame = +1 Query: 52 DKYTQYWSFFRPPQETATTQASADQVPAFVDTFYNLVTDIYEWGWGQSFHFSPSLPGRSH 231 +KY QY F +E + V+ +Y+L T YE+GWG+SFHF+ G S Sbjct: 21 EKYEQYHVFHGGNEEERKANYTD-----MVNKYYDLATSFYEYGWGESFHFAQRWKGESL 75 Query: 232 RDA 240 R++ Sbjct: 76 RES 78
>ERG6_KLULA (Q6CYB3) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 371 Score = 44.3 bits (103), Expect = 9e-05 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +1 Query: 145 TFYNLVTDIYEWGWGQSFHFSPSLPGRS 228 ++YN+VTD YE+GWG SFHFS G S Sbjct: 72 SYYNVVTDFYEYGWGSSFHFSRFFKGES 99
>ERG6_YEAST (P25087) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 382 Score = 43.9 bits (102), Expect = 1e-04 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +1 Query: 145 TFYNLVTDIYEWGWGQSFHFSPSLPGRS 228 ++YN+VTD YE+GWG SFHFS G S Sbjct: 71 SYYNVVTDFYEYGWGSSFHFSRFYKGES 98
>ERG6_ASHGO (Q759S7) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 373 Score = 43.5 bits (101), Expect = 1e-04 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +1 Query: 145 TFYNLVTDIYEWGWGQSFHFSPSLPGRS 228 ++YN+VTD YE+GWG SFHFS G S Sbjct: 73 SYYNVVTDFYEYGWGASFHFSRFYTGES 100
>ERG6_CANGA (Q6FRZ7) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 372 Score = 43.5 bits (101), Expect = 1e-04 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +1 Query: 145 TFYNLVTDIYEWGWGQSFHFSPSLPGRSHRDA 240 ++YN+VTD YE+GWG SFHFS G + + A Sbjct: 72 SYYNVVTDFYEYGWGSSFHFSRFYKGENFQAA 103
>ERG6_PNECA (Q96WX4) Sterol 24-C-methyltransferase (EC 2.1.1.41)| (Delta(24)-sterol C-methyltransferase) Length = 377 Score = 38.9 bits (89), Expect = 0.004 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +1 Query: 148 FYNLVTDIYEWGWGQSFHF 204 +YNLVTD YE+GW SFHF Sbjct: 80 YYNLVTDFYEYGWSTSFHF 98
>RAD5_DEBHA (Q6BIP2) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1153 Score = 30.0 bits (66), Expect = 1.7 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = +1 Query: 103 TTQASADQVPAFVDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHRD 237 TTQ A+ + D F N + DI+EW S H S SLP D Sbjct: 470 TTQDKAN-IQERNDAFMNPLWDIFEWPKDTSMHKSESLPTEDRMD 513
>AREA_GIBFU (P78688) Nitrogen regulatory protein areA| Length = 971 Score = 28.5 bits (62), Expect = 4.8 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 Query: 70 WSFFRPPQETATTQASADQVPAFVDTFYNLVTDIYEWGWGQSFHFSPS 213 +S +P Q Q++ VP +DTF + + + Q+F FSPS Sbjct: 322 YSLDQPNQAGIPQQSNGSNVPFNIDTFMENDSMVNNGNFQQNFSFSPS 369
>AMPM1_SCHPO (O59730) Probable methionine aminopeptidase 1 (EC 3.4.11.18) (MetAP| 1) (MAP 1) (Peptidase M 1) Length = 379 Score = 27.7 bits (60), Expect = 8.2 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +1 Query: 181 GWGQSFHFSPSLPGRSHRDAP 243 G Q FH SPS+P SH AP Sbjct: 290 GINQLFHCSPSIPHYSHNKAP 310 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,512,417 Number of Sequences: 219361 Number of extensions: 298744 Number of successful extensions: 1195 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1159 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1193 length of database: 80,573,946 effective HSP length: 56 effective length of database: 68,289,730 effective search space used: 1638953520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
