ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart49c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OPGH_RALSO (Q8XVC2) Glucans biosynthesis glucosyltransferase H (... 29 9.0

>OPGH_RALSO (Q8XVC2) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)|
          Length = 862

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -3

Query: 295 ERRLSSTTVEA-VRTSLRRAAGSGPRDDDDMSAMAPTRRLKRMNDAAPGLSHGDIGHHPS 119
           ER L +  + A  R +LRR AG  P D D ++     R L R++ A      G +  + S
Sbjct: 33  ERYLEALPLPAEARAALRREAGIEPADKDAVALAKLHRALARLDAAQTASIEGSVPAYAS 92

Query: 118 SGA 110
            G+
Sbjct: 93  IGS 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,989,639
Number of Sequences: 219361
Number of extensions: 802808
Number of successful extensions: 3318
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3316
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top