ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart49c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482276.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
3dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
4gb|CP000249.1| Frankia sp. CcI3, complete genome 48 0.029
5ref|XM_788149.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.45
6gb|AY771780.1| Simian adenovirus 1 strain ATCC VR-195, complete ... 44 0.45
7dbj|AB112586.1| Streptomyces sp. WA46 genes for salicylate degra... 44 0.45
8ref|XM_822847.1| Trypanosoma brucei TREU927 hypothetical protein... 42 1.8
9emb|AL445464.9| Human DNA sequence from clone RP11-262K24 on chr... 42 1.8
10gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.8
11emb|AL137849.13| Human DNA sequence from clone RP11-507D14 on ch... 42 1.8
12gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 42 1.8
13gb|AY268350.1| Homo sapiens mutS homolog 4 (E. coli) (MSH4) gene... 42 1.8
14dbj|AK058021.1| Homo sapiens cDNA FLJ25292 fis, clone STM07318 42 1.8
15ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1G6944... 40 7.1
16ref|XM_481849.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
17ref|XM_474146.1| Oryza sativa (japonica cultivar-group), predic... 40 7.1
18ref|NM_196105.1| Oryza sativa (japonica cultivar-group) putative... 40 7.1
19gb|BC081839.1| Rattus norvegicus high mobility group box 1, mRNA... 40 7.1
20gb|DQ021908.1| Triticum aestivum DRE binding factor (DBF) mRNA, ... 40 7.1
21gb|BC061779.1| Rattus norvegicus high mobility group box 1, mRNA... 40 7.1
22gb|DQ377804.1|DQ377804S1 Squirrelpox virus 1296/99, partial genome 40 7.1
23gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosom... 40 7.1
24gb|AC133191.3| Mus musculus chromosome 18 clone RP23-390K15, com... 40 7.1
25ref|XM_845108.1| PREDICTED: Canis familiaris similar to Fanconi ... 40 7.1
26gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosom... 40 7.1
27ref|XM_816479.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.1
28gb|AC121795.3| Mus musculus BAC clone RP23-421P13 from chromosom... 40 7.1
29gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds 40 7.1
30gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, co... 40 7.1
31ref|XM_861043.1| PREDICTED: Canis familiaris hypothetical protei... 40 7.1
32ref|XM_847576.1| PREDICTED: Canis familiaris hypothetical protei... 40 7.1
33gb|AY257197.1| Homo sapiens enzyme-like protein PIT13 mRNA, comp... 40 7.1
34emb|Z74581.1|HSE127C11 Human DNA sequence from clone LL22NC01-12... 40 7.1
35emb|AL772208.4| Human DNA sequence from clone RP6-29F5 on chromo... 40 7.1
36ref|XM_500185.1| Yarrowia lipolytica CLIB122, YALI0A18007g predi... 40 7.1
37emb|AL136526.27| Human DNA sequence from clone RP11-151A6 on chr... 40 7.1
38gb|AC158149.3| Mus musculus chromosome 5, clone RP24-296L6, comp... 40 7.1
39emb|X72382.1|RCNIFR3 R.capsulatus nifR3 DNA 40 7.1
40emb|X57033.1|BTPOTCHA B.taurus mRNA for potassium channel 40 7.1
41emb|X12359.1|RCNIFR12 Rhodobacter capsulatus nifR1 and nifR2 gene 40 7.1
42emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4,... 40 7.1
43dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 7.1
44gb|AC112724.3| Homo sapiens BAC clone RP11-811L19 from 4, comple... 40 7.1
45gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 7.1
46dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 7.1
47gb|AC113335.1| Genomic sequence for Oryza sativa (japonica culti... 40 7.1
48gb|AF332093.1|AF332093 White spot syndrome virus, complete genome 40 7.1
49gb|AC154456.2| Mus musculus BAC clone RP23-186O10 from chromosom... 40 7.1
50gb|S73585.1| Shaker-like K+ channel [rabbits, renal papilla-deri... 40 7.1
51gb|AC157548.7| Mus musculus chromosome 18, clone RP24-310H1, com... 40 7.1
52gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.1
53gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome... 40 7.1
54dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
55dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
56gb|AY035806.1|Y035786S21 Homo sapiens propionyl-CoA carboxylase ... 40 7.1
57gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10... 40 7.1
58gb|AF369029.2| White spot syndrome virus, complete genome 40 7.1
59ref|NM_174371.2| Bos taurus potassium voltage-gated channel, sha... 40 7.1
60gb|AF286022.1|AF286022 Bos taurus voltage-gated K+ channel Kv1.4... 40 7.1
61ref|XM_573095.1| PREDICTED: Rattus norvegicus similar to High mo... 40 7.1
62ref|XM_575891.1| PREDICTED: Rattus norvegicus similar to High mo... 40 7.1
63ref|XM_345376.2| PREDICTED: Rattus norvegicus similar to putativ... 40 7.1
64ref|XM_226666.3| PREDICTED: Rattus norvegicus adaptor-related pr... 40 7.1
65ref|XM_574476.1| PREDICTED: Rattus norvegicus similar to Hmgb1 p... 40 7.1
66ref|XM_574383.1| PREDICTED: Rattus norvegicus similar to High mo... 40 7.1
67gb|AF284420.1|AF284420 Oryctolagus cuniculus potassium channel s... 40 7.1
68gb|AF275734.1|AF275734 Rattus norvegicus amphoterin mRNA, comple... 40 7.1
69gb|L49336.1|CLOABG Clostridium longisporum methyl-accepting chem... 40 7.1
70dbj|AK107225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
71gb|AF440570.1| Shrimp white spot syndrome virus, complete genome 40 7.1
72dbj|AK104831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
73dbj|AK100049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
74gb|AC154598.2| Mus musculus BAC clone RP23-356P6 from 14, comple... 40 7.1
75dbj|AK072809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
76dbj|AK071987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
77gb|AC132456.5| Mus musculus BAC clone RP23-134L6 from 1, complet... 40 7.1
78gb|U70376.2|U70376 Streptomyces flavopersicus spectinomycin bios... 40 7.1
79gb|M81352.1|RABVGKCC Oryctolagus cuniculus voltage-gated potassi... 40 7.1
80gb|M81351.1|RABVGKCB Oryctolagus cuniculus voltage-gated potassi... 40 7.1
81emb|Y00463.1|RNHMG1 Rat mRNA for high mobility group protein HMG1 40 7.1
82gb|AC006276.1|AC006276 Homo sapiens chromosome 19, cosmid R28379... 40 7.1
83gb|AC111039.13| Mus musculus chromosome 5, clone RP24-463M5, com... 40 7.1
84gb|AC165408.5| Mus musculus chromosome 18, clone wi1-2909J7, com... 40 7.1
85gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
86emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4,... 40 7.1
87gb|AY781345.1| Triticum aestivum DREB2 (DREB2) mRNA, complete cds 40 7.1
88gb|BC045799.1| Homo sapiens chromosome 19 open reading frame 37,... 40 7.1
89gb|AC133102.4| Mus musculus BAC clone RP23-173H19 from 1, comple... 40 7.1
90gb|BC088402.1| Rattus norvegicus high mobility group box 1, mRNA... 40 7.1
91gb|BC015950.2| Homo sapiens chromosome 19 open reading frame 37,... 40 7.1
92gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, comple... 40 7.1
93emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 7.1
94gb|U73138.1|CSU73138 Chlorogloeopsis sp. dinitrogenase reductase... 40 7.1
95ref|NM_012963.2| Rattus norvegicus high mobility group box 1 (Hm... 40 7.1
96ref|NM_182498.2| Homo sapiens chromosome 19 open reading frame 3... 40 7.1
97gb|M63852.1|SYNHMG1 Rat high mobility group 1 protein synthetic ... 40 7.1
98emb|AL122056.1|HSM801288 Homo sapiens mRNA; cDNA DKFZp434P088 (f... 40 7.1
99gb|M64986.1|RATAMPHO Rat amphoterin mRNA, complete cds 40 7.1
100gb|M15825.1|CRUC23 Chinese hamster nucleolin (C23) mRNA 40 7.1
101emb|AL683882.8| Mouse DNA sequence from clone RP23-205P2 on chro... 40 7.1 
>ref|XM_482276.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 990

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                       
Query: 124 ggtggtggccgatgtcgccgtggctgagcccgggcgcggcgtcgttcatcctcttcaacc 183
           ||||||||||| || |||||||||| ||||||||||| |||| |||| |||| |||| | 
Sbjct: 862 ggtggtggccgctgccgccgtggctcagcccgggcgccgcgtggttcgtcctgttcaccg 803

                              
Query: 184 tcctcgtcggcgccatcgc 202
           || | ||||||||| ||||
Sbjct: 802 tcgttgtcggcgccgtcgc 784
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 258      cgcaccgcctcgaccgtcgtgctggagagcctgcgttccgtctccaacttccccttcca 316
                |||||||| |||||||| ||| ||||||| || || |||||| ||||||||||||||||
Sbjct: 19199694 cgcaccgcgtcgaccgttgtgatggagaggctccggtccgtcgccaacttccccttcca 19199752



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                            
Query: 124      ggtggtggccgatgtcgccgtggctgagcccgggcgcggcgtcgttcatcctcttcaacc 183
                ||||||||||| || |||||||||| ||||||||||| |||| |||| |||| |||| | 
Sbjct: 19178975 ggtggtggccgctgccgccgtggctcagcccgggcgccgcgtggttcgtcctgttcaccg 19178916

                                   
Query: 184      tcctcgtcggcgccatcgc 202
                || | ||||||||| ||||
Sbjct: 19178915 tcgttgtcggcgccgtcgc 19178897
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>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0086F04
          Length = 163579

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 258    cgcaccgcctcgaccgtcgtgctggagagcctgcgttccgtctccaacttccccttcca 316
              |||||||| |||||||| ||| ||||||| || || |||||| ||||||||||||||||
Sbjct: 122059 cgcaccgcgtcgaccgttgtgatggagaggctccggtccgtcgccaacttccccttcca 122117



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                          
Query: 124    ggtggtggccgatgtcgccgtggctgagcccgggcgcggcgtcgttcatcctcttcaacc 183
              ||||||||||| || |||||||||| ||||||||||| |||| |||| |||| |||| | 
Sbjct: 101340 ggtggtggccgctgccgccgtggctcagcccgggcgccgcgtggttcgtcctgttcaccg 101281

                                 
Query: 184    tcctcgtcggcgccatcgc 202
              || | ||||||||| ||||
Sbjct: 101280 tcgttgtcggcgccgtcgc 101262
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 225     gggccagaaccggccgcccggcgc 248
               ||||||||||||||||||||||||
Sbjct: 3951764 gggccagaaccggccgcccggcgc 3951787
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>ref|XM_788149.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7334-PA,
           isoform A (LOC588467), mRNA
          Length = 2202

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 169 tcatcctcttcaacctcctcgtcggc 194
           ||||||||||||||||| ||||||||
Sbjct: 215 tcatcctcttcaacctcgtcgtcggc 190
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>gb|AY771780.1| Simian adenovirus 1 strain ATCC VR-195, complete genome
          Length = 34450

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 70    gaggaagaagatcaggaggagg 91
             ||||||||||||||||||||||
Sbjct: 28134 gaggaagaagatcaggaggagg 28113
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>dbj|AB112586.1| Streptomyces sp. WA46 genes for salicylate degradation related
            proteins, complete cds
          Length = 27521

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 133  cgatgtcgccgtggctgagcccgggc 158
            ||||||||||||||| ||||||||||
Sbjct: 3368 cgatgtcgccgtggcggagcccgggc 3393
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>ref|XM_822847.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.2060)
            partial mRNA
          Length = 3312

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 168  ttcatcctcttcaacctcctcgtcg 192
            ||||||||||||| |||||||||||
Sbjct: 1227 ttcatcctcttcatcctcctcgtcg 1203
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>emb|AL445464.9| Human DNA sequence from clone RP11-262K24 on chromosome 1 Contains the
             3' end of the MSH4 gene for mutS homolog 4 (E. coli) and
             the 3' end of the ASB17 gene for ankyrin repeat and SOCS
             box-containing 17, complete sequence
          Length = 103097

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    cagaggaagaagatcaggagg 88
             |||||||||||||||||||||
Sbjct: 14272 cagaggaagaagatcaggagg 14252
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 198     atcgcgctcatgtcgtcgtcg 218
               |||||||||||||||||||||
Sbjct: 1081549 atcgcgctcatgtcgtcgtcg 1081569
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>emb|AL137849.13| Human DNA sequence from clone RP11-507D14 on chromosome 9q21.2-22.1
              Contains a novel gene, a novel gene (MGC4276), the 3' end
              of a novel  gene (FLJ13409) and two CpG islands, complete
              sequence
          Length = 131684

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 71     aggaagaagatcaggaggagg 91
              |||||||||||||||||||||
Sbjct: 105701 aggaagaagatcaggaggagg 105721
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    cgttcatcctcttcaacctcc 186
              |||||||||||||||||||||
Sbjct: 727990 cgttcatcctcttcaacctcc 727970
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>gb|AY268350.1| Homo sapiens mutS homolog 4 (E. coli) (MSH4) gene, complete cds
          Length = 118484

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    cagaggaagaagatcaggagg 88
             |||||||||||||||||||||
Sbjct: 40725 cagaggaagaagatcaggagg 40705
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>dbj|AK058021.1| Homo sapiens cDNA FLJ25292 fis, clone STM07318
          Length = 2394

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 71  aggaagaagatcaggaggagg 91
           |||||||||||||||||||||
Sbjct: 331 aggaagaagatcaggaggagg 311
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>ref|NM_105611.3| Arabidopsis thaliana AGO7 (ARGONAUTE7) AT1G69440 (AGO7) mRNA,
           complete cds
          Length = 3163

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 416 agaggaagaagatgaggaggagga 393
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>ref|XM_481849.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 573

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 170 catcctcttcaacctcctcgtcgg 193
           |||||||||||||||||| |||||
Sbjct: 442 catcctcttcaacctccttgtcgg 419
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>ref|XM_474146.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 cgtgctctgcgccggcggcg 359
           ||||||||||||||||||||
Sbjct: 45  cgtgctctgcgccggcggcg 26
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>ref|NM_196105.1| Oryza sativa (japonica cultivar-group) putative protein phosphatase
           2C (OJ1003C07.6), mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 gtcgtcgtcgtcccgggggc 228
           ||||||||||||||||||||
Sbjct: 222 gtcgtcgtcgtcccgggggc 203
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>gb|BC081839.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone
           MGC:93599 IMAGE:7132958), complete cds
          Length = 2256

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 647 tcatcctcttcatcctcctcgtcg 624
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>gb|DQ021908.1| Triticum aestivum DRE binding factor (DBF) mRNA, complete cds
          Length = 999

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 gtcgcagctccaccacgtgc 378
           ||||||||||||||||||||
Sbjct: 279 gtcgcagctccaccacgtgc 298
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>gb|BC061779.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone
           MGC:72533 IMAGE:5623285), complete cds
          Length = 1214

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 635 tcatcctcttcatcctcctcgtcg 612
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>gb|DQ377804.1|DQ377804S1 Squirrelpox virus 1296/99, partial genome
          Length = 25260

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   tcctcttcaacctcctcgtc 191
             ||||||||||||||||||||
Sbjct: 23563 tcctcttcaacctcctcgtc 23582
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>gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosome 17, complete
             sequence
          Length = 157958

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             |||||||||||| |||||||||||
Sbjct: 91577 agaggaagaagagcaggaggagga 91600
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>gb|AC133191.3| Mus musculus chromosome 18 clone RP23-390K15, complete sequence
          Length = 212060

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     agaggaagaagatcaggaggagga 92
              ||||||||||||| ||||||||||
Sbjct: 163613 agaggaagaagatgaggaggagga 163590
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>ref|XM_845108.1| PREDICTED: Canis familiaris similar to Fanconi anemia,
           complementation group E (LOC608172), mRNA
          Length = 2147

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||| ||||||||||||
Sbjct: 699 agaggaagaaggtcaggaggagga 722
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>gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosome 13, complete sequence
          Length = 177675

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     agaggaagaagatcaggaggagga 92
              |||||||||||| |||||||||||
Sbjct: 172943 agaggaagaagagcaggaggagga 172920
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>ref|XM_816479.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506925.220) partial mRNA
          Length = 2691

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 68   cagaggaagaagatcaggaggagg 91
            ||||||||||||| ||||||||||
Sbjct: 1280 cagaggaagaagaacaggaggagg 1303
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>gb|AC121795.3| Mus musculus BAC clone RP23-421P13 from chromosome 17, complete sequence
          Length = 204354

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 69     agaggaagaagatcaggaggagga 92
              |||||||||||| |||||||||||
Sbjct: 192259 agaggaagaagagcaggaggagga 192282
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>gb|AY394564.1| Arabidopsis thaliana ZIPPY mRNA, complete cds
          Length = 3161

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 416 agaggaagaagatgaggaggagga 393
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>gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, complete sequence
          Length = 217309

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     agaggaagaagatcaggaggagga 92
              ||||||||||||| ||||||||||
Sbjct: 212873 agaggaagaagatgaggaggagga 212850
to top
>ref|XM_861043.1| PREDICTED: Canis familiaris hypothetical protein LOC611184,
           transcript variant 2 (LOC611184), mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 309 agaggaagaagatgaggaggagga 332
to top
>ref|XM_847576.1| PREDICTED: Canis familiaris hypothetical protein LOC611184,
           transcript variant 1 (LOC611184), mRNA
          Length = 910

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 304 agaggaagaagatgaggaggagga 327
to top
>gb|AY257197.1| Homo sapiens enzyme-like protein PIT13 mRNA, complete cds
          Length = 706

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 304 agaggaagaagatgaggaggagga 327
to top
>emb|Z74581.1|HSE127C11 Human DNA sequence from clone LL22NC01-127C11 on chromosome 22,
            complete sequence
          Length = 38423

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 69   agaggaagaagatcaggaggagga 92
            ||||||||||||| ||||||||||
Sbjct: 2922 agaggaagaagatgaggaggagga 2899
to top
>emb|AL772208.4| Human DNA sequence from clone RP6-29F5 on chromosome X Contains the 3'
             end of a novel gene (FLJ35046, FLJ34279, FLJ38843,
             FLJ33130, DKFZp667C011) and two CpG islands, complete
             sequence
          Length = 40735

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   gcgggaggcgagcagggtgg 435
             ||||||||||||||||||||
Sbjct: 16963 gcgggaggcgagcagggtgg 16944
to top
>ref|XM_500185.1| Yarrowia lipolytica CLIB122, YALI0A18007g predicted mRNA
          Length = 1596

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 472 tagcggcggccgcgacaaca 491
           ||||||||||||||||||||
Sbjct: 45  tagcggcggccgcgacaaca 64
to top
>emb|AL136526.27| Human DNA sequence from clone RP11-151A6 on chromosome 13q32.21-33.3
              Contains the 3' end of the PCCA gene for propionyl Coenzyme
              A carboxylase alpha polypeptide, the 3' end of a novel
              gene, a novel gene for a protein similar to ribosomal
              protein 26, the 3' end of a novel gene, a novel gene and a
              CpG island, complete sequence
          Length = 179804

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    gtctccaacttccccttcca 316
              ||||||||||||||||||||
Sbjct: 136854 gtctccaacttccccttcca 136873
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>gb|AC158149.3| Mus musculus chromosome 5, clone RP24-296L6, complete sequence
          Length = 155517

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             ||||||||||||| ||||||||||
Sbjct: 33570 agaggaagaagatgaggaggagga 33547
to top
>emb|X72382.1|RCNIFR3 R.capsulatus nifR3 DNA
          Length = 5847

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 227  gccagaaccggccgcccggc 246
            ||||||||||||||||||||
Sbjct: 1318 gccagaaccggccgcccggc 1337
to top
>emb|X57033.1|BTPOTCHA B.taurus mRNA for potassium channel
          Length = 3065

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   agaggaagaagatcaggagg 88
            ||||||||||||||||||||
Sbjct: 1930 agaggaagaagatcaggagg 1911
to top
>emb|X12359.1|RCNIFR12 Rhodobacter capsulatus nifR1 and nifR2 gene
          Length = 8030

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 227  gccagaaccggccgcccggc 246
            ||||||||||||||||||||
Sbjct: 3510 gccagaaccggccgcccggc 3529
to top
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06,
             complete sequence
          Length = 151506

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   cgtgctctgcgccggcggcg 359
             ||||||||||||||||||||
Sbjct: 26522 cgtgctctgcgccggcggcg 26541
to top
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 277     tgctggagagcctgcgttcc 296
               ||||||||||||||||||||
Sbjct: 3282644 tgctggagagcctgcgttcc 3282625
to top
>gb|AC112724.3| Homo sapiens BAC clone RP11-811L19 from 4, complete sequence
          Length = 42210

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             ||||||||||||| ||||||||||
Sbjct: 25057 agaggaagaagatgaggaggagga 25080
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    accggccgcccggcgcaggc 252
              ||||||||||||||||||||
Sbjct: 714632 accggccgcccggcgcaggc 714651
to top
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      gaagaagatcaggaggagga 92
               ||||||||||||||||||||
Sbjct: 1213369 gaagaagatcaggaggagga 1213350
to top
>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1003C07, from chromosome 10, complete
             sequence
          Length = 115188

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   gtcgtcgtcgtcccgggggc 228
             ||||||||||||||||||||
Sbjct: 40693 gtcgtcgtcgtcccgggggc 40674
to top
>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome
          Length = 305107

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     agaggaagaagatcaggaggagga 92
              |||||||||||| |||||||||||
Sbjct: 183128 agaggaagaagaacaggaggagga 183105
to top
>gb|AC154456.2| Mus musculus BAC clone RP23-186O10 from chromosome 16, complete
             sequence
          Length = 193598

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             ||||||||||||| ||||||||||
Sbjct: 74360 agaggaagaagatgaggaggagga 74337
to top
>gb|S73585.1| Shaker-like K+ channel [rabbits, renal papilla-derived GRB-PAP1
           cell line, mRNA Partial, 841 nt]
          Length = 841

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  agaggaagaagatcaggagg 88
           ||||||||||||||||||||
Sbjct: 767 agaggaagaagatcaggagg 748
to top
>gb|AC157548.7| Mus musculus chromosome 18, clone RP24-310H1, complete sequence
          Length = 177509

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 472 agaggaagaagatgaggaggagga 495
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tcgtcggcgccatcgcgctc 206
               ||||||||||||||||||||
Sbjct: 2868741 tcgtcggcgccatcgcgctc 2868760
to top
>gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome 16, complete sequence
          Length = 200787

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             ||||||||||||| ||||||||||
Sbjct: 47229 agaggaagaagatgaggaggagga 47252
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 340      cgtgctctgcgccggcggcg 359
                ||||||||||||||||||||
Sbjct: 33254261 cgtgctctgcgccggcggcg 33254280
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 209      gtcgtcgtcgtcccgggggc 228
                ||||||||||||||||||||
Sbjct: 11118364 gtcgtcgtcgtcccgggggc 11118383
to top
>gb|AY035806.1|Y035786S21 Homo sapiens propionyl-CoA carboxylase alpha polypeptide precursor
           (PCCA) gene, exon 22
          Length = 318

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 gtctccaacttccccttcca 316
           ||||||||||||||||||||
Sbjct: 258 gtctccaacttccccttcca 277
to top
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete
             sequence
          Length = 107214

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             ||||||||||||| ||||||||||
Sbjct: 48072 agaggaagaagatgaggaggagga 48095
to top
>gb|AF369029.2| White spot syndrome virus, complete genome
          Length = 292967

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     agaggaagaagatcaggaggagga 92
              |||||||||||| |||||||||||
Sbjct: 231924 agaggaagaagaacaggaggagga 231901
to top
>ref|NM_174371.2| Bos taurus potassium voltage-gated channel, shaker-related subfamily,
            memeber 4 (KCNA4), mRNA
          Length = 4384

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   agaggaagaagatcaggagg 88
            ||||||||||||||||||||
Sbjct: 2638 agaggaagaagatcaggagg 2619
to top
>gb|AF286022.1|AF286022 Bos taurus voltage-gated K+ channel Kv1.4 mRNA, complete cds
          Length = 4384

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   agaggaagaagatcaggagg 88
            ||||||||||||||||||||
Sbjct: 2638 agaggaagaagatcaggagg 2619
to top
>ref|XM_573095.1| PREDICTED: Rattus norvegicus similar to High mobility group protein
           1 (HMG-1) (Amphoterin) (Heparin-binding protein p30)
           (LOC497907), mRNA
          Length = 1297

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 710 tcatcctcttcatcctcctcgtcg 687
to top
>ref|XM_575891.1| PREDICTED: Rattus norvegicus similar to High mobility group protein
           1 (HMG-1) (Amphoterin) (Heparin-binding protein p30)
           (LOC500530), mRNA
          Length = 1226

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 713 tcatcctcttcatcctcctcgtcg 690
to top
>ref|XM_345376.2| PREDICTED: Rattus norvegicus similar to putative protein kinase
            (LOC366086), mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 169  tcatcctcttcaacctcctcgtcg 192
            |||||||||||| |||||||||||
Sbjct: 1355 tcatcctcttcatcctcctcgtcg 1332
to top
>ref|XM_226666.3| PREDICTED: Rattus norvegicus adaptor-related protein complex 3, beta
            1 subunit (predicted) (Ap3b1_predicted), mRNA
          Length = 4600

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 73   gaagaagatcaggaggaggatccc 96
            ||||||||| ||||||||||||||
Sbjct: 2809 gaagaagatgaggaggaggatccc 2832
to top
>ref|XM_574476.1| PREDICTED: Rattus norvegicus similar to Hmgb1 protein (LOC499183),
           mRNA
          Length = 2295

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 722 tcatcctcttcatcctcctcgtcg 699
to top
>ref|XM_574383.1| PREDICTED: Rattus norvegicus similar to High mobility group protein
           1 (HMG-1) (Amphoterin) (Heparin-binding protein p30)
           (LOC499092), mRNA
          Length = 1269

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 691 tcatcctcttcatcctcctcgtcg 668
to top
>gb|AF284420.1|AF284420 Oryctolagus cuniculus potassium channel subunit Kv 1.2 mRNA, complete
            cds
          Length = 1823

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   agaggaagaagatcaggagg 88
            ||||||||||||||||||||
Sbjct: 1217 agaggaagaagatcaggagg 1198
to top
>gb|AF275734.1|AF275734 Rattus norvegicus amphoterin mRNA, complete cds
          Length = 1245

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 679 tcatcctcttcatcctcctcgtcg 656
to top
>gb|L49336.1|CLOABG Clostridium longisporum methyl-accepting chemotaxis protein (macA)
            gene, partial cds; and tryptophanyl-tRNA synthetase
            (trsA), regulatory protein (abgG), PTS-dependent enzyme
            II (abgF), phospho-beta-glucosidase (abgA), ORF;
            putative, and PII-like protein genes, complete cds
          Length = 7518

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  ttccgtctccaacttcccct 312
            ||||||||||||||||||||
Sbjct: 7125 ttccgtctccaacttcccct 7106
to top
>dbj|AK107225.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D09, full
           insert sequence
          Length = 1297

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 cgtgctctgcgccggcggcg 359
           ||||||||||||||||||||
Sbjct: 218 cgtgctctgcgccggcggcg 199
to top
>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome
          Length = 307287

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     agaggaagaagatcaggaggagga 92
              |||||||||||| |||||||||||
Sbjct: 216736 agaggaagaagaacaggaggagga 216713
to top
>dbj|AK104831.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A04, full
           insert sequence
          Length = 2181

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 cgtgctctgcgccggcggcg 359
           ||||||||||||||||||||
Sbjct: 215 cgtgctctgcgccggcggcg 196
to top
>dbj|AK100049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155A10, full
           insert sequence
          Length = 1876

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 gtcgtcgtcgtcccgggggc 228
           ||||||||||||||||||||
Sbjct: 280 gtcgtcgtcgtcccgggggc 261
to top
>gb|AC154598.2| Mus musculus BAC clone RP23-356P6 from 14, complete sequence
          Length = 206646

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     ggaagaagatcaggaggagg 91
              ||||||||||||||||||||
Sbjct: 126920 ggaagaagatcaggaggagg 126901
to top
>dbj|AK072809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141I19, full
           insert sequence
          Length = 2338

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 cgtgctctgcgccggcggcg 359
           ||||||||||||||||||||
Sbjct: 221 cgtgctctgcgccggcggcg 202
to top
>dbj|AK071987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J19, full
           insert sequence
          Length = 1857

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 gtcgtcgtcgtcccgggggc 228
           ||||||||||||||||||||
Sbjct: 341 gtcgtcgtcgtcccgggggc 322
to top
>gb|AC132456.5| Mus musculus BAC clone RP23-134L6 from 1, complete sequence
          Length = 204402

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     agaggaagaagatcaggaggagga 92
              ||||||||||||| ||||||||||
Sbjct: 179107 agaggaagaagatgaggaggagga 179084
to top
>gb|U70376.2|U70376 Streptomyces flavopersicus spectinomycin biosynthesis gene cluster,
             complete sequence
          Length = 29606

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   gctcgtccgcaccgcctcga 270
             ||||||||||||||||||||
Sbjct: 17073 gctcgtccgcaccgcctcga 17054
to top
>gb|M81352.1|RABVGKCC Oryctolagus cuniculus voltage-gated potassium channel isoform 3
           mRNA, partial cds
          Length = 832

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  agaggaagaagatcaggagg 88
           ||||||||||||||||||||
Sbjct: 758 agaggaagaagatcaggagg 739
to top
>gb|M81351.1|RABVGKCB Oryctolagus cuniculus voltage-gated potassium channel isoform 2
           mRNA, partial cds
          Length = 838

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  agaggaagaagatcaggagg 88
           ||||||||||||||||||||
Sbjct: 764 agaggaagaagatcaggagg 745
to top
>emb|Y00463.1|RNHMG1 Rat mRNA for high mobility group protein HMG1
          Length = 825

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 617 tcatcctcttcatcctcctcgtcg 594
to top
>gb|AC006276.1|AC006276 Homo sapiens chromosome 19, cosmid R28379, complete sequence
          Length = 38253

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             ||||||||||||| ||||||||||
Sbjct: 29271 agaggaagaagatgaggaggagga 29248
to top
>gb|AC111039.13| Mus musculus chromosome 5, clone RP24-463M5, complete sequence
          Length = 141949

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             ||||||||||||| ||||||||||
Sbjct: 72488 agaggaagaagatgaggaggagga 72465
to top
>gb|AC165408.5| Mus musculus chromosome 18, clone wi1-2909J7, complete sequence
          Length = 39518

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             ||||||||||||| ||||||||||
Sbjct: 13515 agaggaagaagatgaggaggagga 13492
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 209      gtcgtcgtcgtcccgggggc 228
                ||||||||||||||||||||
Sbjct: 11124804 gtcgtcgtcgtcccgggggc 11124823
to top
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02,
              complete sequence
          Length = 165745

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    cgtgctctgcgccggcggcg 359
              ||||||||||||||||||||
Sbjct: 136910 cgtgctctgcgccggcggcg 136929
to top
>gb|AY781345.1| Triticum aestivum DREB2 (DREB2) mRNA, complete cds
          Length = 847

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 gtcgcagctccaccacgtgc 378
           ||||||||||||||||||||
Sbjct: 14  gtcgcagctccaccacgtgc 33
to top
>gb|BC045799.1| Homo sapiens chromosome 19 open reading frame 37, mRNA (cDNA clone
           MGC:51082 IMAGE:4813427), complete cds
          Length = 1152

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 307 agaggaagaagatgaggaggagga 330
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>gb|AC133102.4| Mus musculus BAC clone RP23-173H19 from 1, complete sequence
          Length = 199590

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             ||||||||||||| ||||||||||
Sbjct: 11997 agaggaagaagatgaggaggagga 11974
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>gb|BC088402.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone
           MGC:93598 IMAGE:7128547), complete cds
          Length = 1361

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 723 tcatcctcttcatcctcctcgtcg 700
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>gb|BC015950.2| Homo sapiens chromosome 19 open reading frame 37, mRNA (cDNA clone
           MGC:9608 IMAGE:3908182), complete cds
          Length = 895

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 283 agaggaagaagatgaggaggagga 306
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>gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, complete sequence
          Length = 201730

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    agaggaagaagatcaggaggagga 92
             |||||||||||| |||||||||||
Sbjct: 51067 agaggaagaagagcaggaggagga 51044
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 472     tagcggcggccgcgacaaca 491
               ||||||||||||||||||||
Sbjct: 1874395 tagcggcggccgcgacaaca 1874414
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>gb|U73138.1|CSU73138 Chlorogloeopsis sp. dinitrogenase reductase (nifH) gene, partial
           cds
          Length = 324

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 489 acacctcgccgcagagcgcg 508
           ||||||||||||||||||||
Sbjct: 45  acacctcgccgcagagcgcg 64
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>ref|NM_012963.2| Rattus norvegicus high mobility group box 1 (Hmgb1), mRNA
          Length = 2256

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 647 tcatcctcttcatcctcctcgtcg 624
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>ref|NM_182498.2| Homo sapiens chromosome 19 open reading frame 37 (C19orf37), mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 556 agaggaagaagatgaggaggagga 579
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>gb|M63852.1|SYNHMG1 Rat high mobility group 1 protein synthetic gene, complete cds
          Length = 924

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 678 tcatcctcttcatcctcctcgtcg 655
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>emb|AL122056.1|HSM801288 Homo sapiens mRNA; cDNA DKFZp434P088 (from clone DKFZp434P088)
          Length = 4369

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 gtctccaacttccccttcca 316
           ||||||||||||||||||||
Sbjct: 899 gtctccaacttccccttcca 918
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>gb|M64986.1|RATAMPHO Rat amphoterin mRNA, complete cds
          Length = 1225

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 tcatcctcttcaacctcctcgtcg 192
           |||||||||||| |||||||||||
Sbjct: 712 tcatcctcttcatcctcctcgtcg 689
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>gb|M15825.1|CRUC23 Chinese hamster nucleolin (C23) mRNA
          Length = 2229

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  agaggaagaagatcaggaggagga 92
           ||||||||||||| ||||||||||
Sbjct: 666 agaggaagaagatgaggaggagga 689
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>emb|AL683882.8| Mouse DNA sequence from clone RP23-205P2 on chromosome 2, complete
             sequence
          Length = 74687

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    ggaagaagatcaggaggagg 91
             ||||||||||||||||||||
Sbjct: 58427 ggaagaagatcaggaggagg 58408


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,551,238
Number of Sequences: 3902068
Number of extensions: 3551238
Number of successful extensions: 80250
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79293
Number of HSP's gapped (non-prelim): 957
length of query: 525
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 502
effective length of database: 17,143,297,704
effective search space: 8605935447408
effective search space used: 8605935447408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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