ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49c08 |
|---|---|
| Clone Library Name | barley_pub |
>DCE_PETHY (Q07346) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 500 Score = 236 bits (601), Expect = 5e-62 Identities = 115/123 (93%), Positives = 120/123 (97%) Frame = +2 Query: 221 TFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLM 400 TFASRYVR SLPR++MP+NSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPEC+KLM Sbjct: 17 TFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLM 76 Query: 401 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLA 580 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL + ETAVGVGTVGSSEAIMLAGLA Sbjct: 77 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGETAVGVGTVGSSEAIMLAGLA 136 Query: 581 FKR 589 FKR Sbjct: 137 FKR 139
>DCE1_ARATH (Q42521) Glutamate decarboxylase 1 (EC 4.1.1.15) (GAD 1)| Length = 502 Score = 235 bits (599), Expect = 8e-62 Identities = 115/123 (93%), Positives = 119/123 (96%) Frame = +2 Query: 221 TFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLM 400 TFASRYVR SLPR++MPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPEC+KL+ Sbjct: 17 TFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLI 76 Query: 401 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLA 580 M SINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL E ETAVGVGTVGSSEAIMLAGLA Sbjct: 77 MSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLA 136 Query: 581 FKR 589 FKR Sbjct: 137 FKR 139
>DCE_LYCES (P54767) Glutamate decarboxylase (EC 4.1.1.15) (GAD) (ERT D1)| Length = 502 Score = 221 bits (562), Expect = 2e-57 Identities = 104/123 (84%), Positives = 118/123 (95%) Frame = +2 Query: 221 TFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLM 400 TFASRYV+ LP+++MP+ S+PKEAAYQI+NDELMLDGNPRLNLASFV+TWMEPEC+KL+ Sbjct: 18 TFASRYVQEPLPKFKMPKKSMPKEAAYQIVNDELMLDGNPRLNLASFVSTWMEPECDKLI 77 Query: 401 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLA 580 M SINKNYVDMDEYPVTTELQNRCVNM+AHLF+AP+G+ ETAVGVGTVGSSEAIMLAGLA Sbjct: 78 MSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAVGVGTVGSSEAIMLAGLA 137 Query: 581 FKR 589 FKR Sbjct: 138 FKR 140
>DCE2_ARATH (Q42472) Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)| Length = 494 Score = 219 bits (559), Expect = 4e-57 Identities = 107/122 (87%), Positives = 115/122 (94%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F SRYVR +LP+Y + ENSIPK+AAYQII DELMLDGNPRLNLASFVTTWMEPEC+KL+M Sbjct: 17 FGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIM 76 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 DSINKNYVDMDEYPVTTELQNRCVN+IA LFNAPL E+ETAVGVGTVGSSEAIMLAGLAF Sbjct: 77 DSINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAVGVGTVGSSEAIMLAGLAF 136 Query: 584 KR 589 KR Sbjct: 137 KR 138
>DCE_LACLA (Q9CG20) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 466 Score = 127 bits (318), Expect = 3e-29 Identities = 62/121 (51%), Positives = 83/121 (68%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F S + LP+Y++ + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM Sbjct: 18 FGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMS 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 ++ KN +D EYP TTE++NRCVNMIA L+NA E E +G T+GSSEA ML G+A Sbjct: 78 QTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAM 135 Query: 584 K 586 K Sbjct: 136 K 136
>DCE_LACLC (O30418) Glutamate decarboxylase (EC 4.1.1.15)| Length = 466 Score = 124 bits (310), Expect = 3e-28 Identities = 61/121 (50%), Positives = 81/121 (66%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F S + LP+Y++ + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM Sbjct: 18 FGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMS 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 ++ KN +D EYP TTE++NRCVNMIA L+NA E G T+GSSEA ML G+A Sbjct: 78 QTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKGKIYGTSTIGSSEACMLGGMAM 135 Query: 584 K 586 K Sbjct: 136 K 136
>DCEB_SHIFL (P69912) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 114 bits (286), Expect = 2e-25 Identities = 57/121 (47%), Positives = 78/121 (64%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 584 K 586 K Sbjct: 138 K 138
>DCEB_ECOLI (P69910) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 114 bits (286), Expect = 2e-25 Identities = 57/121 (47%), Positives = 78/121 (64%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 584 K 586 K Sbjct: 138 K 138
>DCEB_ECOL6 (Q8FHG5) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 114 bits (286), Expect = 2e-25 Identities = 57/121 (47%), Positives = 78/121 (64%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMD 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 584 K 586 K Sbjct: 138 K 138
>DCEB_ECO57 (P69911) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 114 bits (286), Expect = 2e-25 Identities = 57/121 (47%), Positives = 78/121 (64%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 584 K 586 K Sbjct: 138 K 138
>DCEA_SHIFL (Q83PR1) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 114 bits (286), Expect = 2e-25 Identities = 57/121 (47%), Positives = 78/121 (64%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 584 K 586 K Sbjct: 138 K 138
>DCEA_ECOLI (P69908) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 114 bits (286), Expect = 2e-25 Identities = 57/121 (47%), Positives = 78/121 (64%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 584 K 586 K Sbjct: 138 K 138
>DCEA_ECOL6 (P69909) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 114 bits (286), Expect = 2e-25 Identities = 57/121 (47%), Positives = 78/121 (64%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 584 K 586 K Sbjct: 138 K 138
>DCEA_ECO57 (P58228) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 114 bits (286), Expect = 2e-25 Identities = 57/121 (47%), Positives = 78/121 (64%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 584 K 586 K Sbjct: 138 K 138
>DCEC_LISMO (Q8Y4K4) Probabl glutamate decarboxylase gamma (EC 4.1.1.15)| (GAD-gamma) Length = 467 Score = 112 bits (281), Expect = 6e-25 Identities = 57/121 (47%), Positives = 79/121 (65%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F S S+P+Y + + + AYQ++ D+LM +GN R NLA+F T+ME E LM Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMA 78 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 +++ KN +D EYP T EL+NRCVN++A L+NAP + + +G TVGSSEA ML GLA Sbjct: 79 ETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KDMSYLGTSTVGSSEACMLGGLAM 136 Query: 584 K 586 K Sbjct: 137 K 137
>DCEC_LISIN (Q928K4) Probabl glutamate decarboxylase gamma (EC 4.1.1.15)| (GAD-gamma) Length = 467 Score = 112 bits (281), Expect = 6e-25 Identities = 57/121 (47%), Positives = 79/121 (65%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F S S+P+Y + + + AYQ++ D+LM +GN R NLA+F T+ME E LM Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMA 78 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 +++ KN +D EYP T EL+NRCVN++A L+NAP + + +G TVGSSEA ML GLA Sbjct: 79 ETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KEMSYLGTSTVGSSEACMLGGLAM 136 Query: 584 K 586 K Sbjct: 137 K 137
>DCE_YEAST (Q04792) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 585 Score = 109 bits (273), Expect = 5e-24 Identities = 53/111 (47%), Positives = 75/111 (67%) Frame = +2 Query: 257 RYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMMDSINKNYVDMD 436 +Y +P+ +P + +YQ+I++EL LDGNP LNLASFV T+ + KL+ +++ KN D D Sbjct: 59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADND 118 Query: 437 EYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAFKR 589 EYP EL RC++M+A L++A E +G T GSSEAIML GLA K+ Sbjct: 119 EYPQLIELTQRCISMLAQLWHA--NPDEEPIGCATTGSSEAIMLGGLAMKK 167
>DCEB_LISIN (Q928R9) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 464 Score = 108 bits (271), Expect = 9e-24 Identities = 53/121 (43%), Positives = 79/121 (65%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F S +P+Y + + + AY+++ DEL+ +G+ R NLA+F T+ME E KLM Sbjct: 16 FGSSAEDRDIPKYTLAKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMS 75 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 +++ KN +D EYP T EL+NRCVN+IA L++AP + + +G T+GSSEA ML G+A Sbjct: 76 ETLEKNAIDKSEYPRTAELENRCVNIIADLWHAP--KDQKFMGTSTIGSSEACMLGGMAM 133 Query: 584 K 586 K Sbjct: 134 K 134
>DCEB_LISMO (Q9EYW9) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 464 Score = 108 bits (270), Expect = 1e-23 Identities = 53/121 (43%), Positives = 79/121 (65%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 403 F S +P+Y + + + AY+++ DEL+ +G+ R NLA+F T+ME E KLM Sbjct: 16 FGSSAEDRDIPKYTLGKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMS 75 Query: 404 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 583 +++ KN +D EYP T EL+NRCVN+IA L++AP + + +G T+GSSEA ML G+A Sbjct: 76 ETLEKNAIDKSEYPRTAELENRCVNIIADLWHAP--KDQKFMGTSTIGSSEACMLGGMAM 133 Query: 584 K 586 K Sbjct: 134 K 134
>DCEA_LISMO (Q9F5P3) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 462 Score = 107 bits (266), Expect = 3e-23 Identities = 52/112 (46%), Positives = 77/112 (68%) Frame = +2 Query: 251 LPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMMDSINKNYVD 430 LP RM + S+ AYQ++ D+L+ +G+ R NLA+F T+MEPE ++M +++ KN +D Sbjct: 23 LPEKRMNKESVDPRIAYQLVKDQLIDEGSARQNLATFCQTYMEPEAEQIMAETMEKNAID 82 Query: 431 MDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAFK 586 EYP T +L++ CVNM+A L+N + E+E +G TVGSSEA ML G+A K Sbjct: 83 KSEYPQTAKLESSCVNMLADLWN--VDESEHYMGTSTVGSSEACMLGGMAMK 132
>NUAK1_HUMAN (O60285) NUAK family, SNF1-like kinase 1 (EC 2.7.11.1)| (AMPK-related protein kinase 5) Length = 661 Score = 32.3 bits (72), Expect = 1.0 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Frame = +1 Query: 253 AKVPDAGELDPQGSGVPDHQRRADAGREPAAEP----GVLRHHLDGARVQQAHDGLHQQE 420 A P AG+ G G P R A AG A EP GV RHH H+ H+ E Sbjct: 4 AAAPVAGDRPDLGLGAPGSPREAVAGATAALEPRKPHGVKRHH-------HKHNLKHRYE 56 Query: 421 LRR------HGRVPR 447 L+ +G+V R Sbjct: 57 LQETLGKGTYGKVKR 71
>CDC27_HUMAN (P30260) Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC)| Length = 824 Score = 31.2 bits (69), Expect = 2.3 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Frame = +2 Query: 224 FASRYVRASLPRYRMPENSIPKEA-AYQIINDELMLDGNPRLNLASFVTTW---MEPE-C 388 FA+ +++L + +PKE+ Y +I G L L +F +W ++P+ Sbjct: 714 FANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNF--SWAMDLDPKGA 771 Query: 389 NKLMMDSINKNYVDMDEYPVTTELQ 463 N + ++I+K Y+ DE P+T E Q Sbjct: 772 NNQIKEAIDKRYLPDDEEPITQEEQ 796
>Y616_FRATT (Q5NH55) UPF0054 protein FTT0616c| Length = 168 Score = 31.2 bits (69), Expect = 2.3 Identities = 12/34 (35%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = +2 Query: 392 KLMMDSINKNYVDMDEYPV-TTELQNRCVNMIAH 490 KL MD++N N+++ DE+P+ + +L +C+ ++A+ Sbjct: 4 KLKMDNLNINFINDDEHPIPSQDLLLKCLQLVAN 37
>ITA5_BOVIN (Q27977) Integrin alpha-5 (Fibronectin receptor alpha subunit)| (Integrin alpha-F) (VLA-5) (CD49e antigen) (Fragment) Length = 385 Score = 30.4 bits (67), Expect = 4.0 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Frame = +1 Query: 262 PDAGELDPQGSGVPDHQRRADAGREPAAE-PGVLR-HHLDGARVQQAHDGLHQQELRRHG 435 P+ ELDP+GS QRR GR PA+ P +L+ + +++ LH+QE R Sbjct: 234 PEGLELDPEGSQHHRLQRRMFLGRSPASSGPQILKCPEAECFKLRCELGPLHRQESRSLQ 293 Query: 436 RVPRHHRAPEPMREHDRASLQ 498 R REH SLQ Sbjct: 294 LHFRVWAKAFLQREHQPFSLQ 314
>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25| Length = 447 Score = 30.4 bits (67), Expect = 4.0 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = +1 Query: 304 DH--QRRADAGREPAAEPGVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAPEPMRE 477 DH +RR+ A R P+ G H+ D R + DG H R R+H PE R Sbjct: 286 DHSTRRRSYADRSPSPRRG--NHYYDRRRTEDRSDGYH--------RDSRNHDRPEFYRG 335 Query: 478 HDR 486 +DR Sbjct: 336 NDR 338
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.6 bits (65), Expect = 6.7 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +1 Query: 388 QQAHDGLHQQELRRHGRVPRHHRAPEPMREHDRASLQR 501 QQ H QQ+ ++H + +HH+ +P ++H Q+ Sbjct: 203 QQQHHQQQQQQQQQHHQQQQHHQHSQPQQQHQHNQQQQ 240
>LPQT_MYCBO (Q7U0V0) Putative lipoprotein lpqT precursor| Length = 252 Score = 29.6 bits (65), Expect = 6.7 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 328 GREPAAEPGVLRHHLDGARVQQA---HDGLHQQELRRHGRV 441 G AA PG HH G R +QA H G H++ +RR G+V Sbjct: 186 GAGQAALPGAAHHHESGQRGRQARFRHRGDHRR-IRRRGKV 225 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,065,078 Number of Sequences: 219361 Number of extensions: 1260729 Number of successful extensions: 5095 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 4827 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5079 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
