ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49c02 |
|---|---|
| Clone Library Name | barley_pub |
>PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) Length = 389 Score = 276 bits (705), Expect = 4e-74 Identities = 145/161 (90%), Positives = 150/161 (93%) Frame = +3 Query: 123 KQQPQLVLAHKLFLLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAADGVLEMDAAL 302 KQQP LVLAHKLFLLS PDVDDLAKV LR DVLAAVKSDDMA+LYESL A GVLE DAAL Sbjct: 10 KQQPHLVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLETDAAL 69 Query: 303 LAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEG 482 LAEMRGRIEEE RK DEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEG Sbjct: 70 LAEMRGRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEG 129 Query: 483 KTVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDRAKILFEE 605 KTVAVGQKMDLVF+TLQIG F+MDFDLISKS+D+AK LFEE Sbjct: 130 KTVAVGQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEE 170
>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6| Length = 387 Score = 222 bits (565), Expect = 7e-58 Identities = 111/160 (69%), Positives = 134/160 (83%) Frame = +3 Query: 126 QQPQLVLAHKLFLLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAADGVLEMDAALL 305 QQP L+LA+KLFLL+ PDV D+ KV L+ +VL ++S MA LYE+L A VL++D +LL Sbjct: 9 QQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDLDQSLL 68 Query: 306 AEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGK 485 MR EEE +K DEKIADAEENLGESEVREAHLAK+LYFIR+ +KEKALEQLK+TEGK Sbjct: 69 ESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLKLTEGK 128 Query: 486 TVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDRAKILFEE 605 TVAVGQKMD+VFYTLQ+ F+MDFDL+SKS+D+AK LFEE Sbjct: 129 TVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEE 168
>PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) Length = 389 Score = 138 bits (347), Expect = 1e-32 Identities = 73/160 (45%), Positives = 112/160 (70%) Frame = +3 Query: 126 QQPQLVLAHKLFLLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAADGVLEMDAALL 305 + P L +A FLLS P+ A V R++++AAV+ ++MA YE+L +MD LL Sbjct: 13 KNPDLRIAQLRFLLSLPEHRGDAAV--REELMAAVRENNMAPYYEALCKSLDWQMDVDLL 70 Query: 306 AEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGK 485 ++M+ EEE ++ DE++ DAE+NLGESE+R+A +AK+ Y ++G+KE AL + T K Sbjct: 71 SKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALTAFRKTYDK 130 Query: 486 TVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDRAKILFEE 605 TVA+G ++D+VFY L+IGLF+MD DLI+++ ++AK L EE Sbjct: 131 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEE 170
>PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) (Proteasome regulatory particle subunit p44S10) (Phosphonoformate immuno-associated protein 4) (Breast cancer-associated protein SGA-113M) Length = 389 Score = 137 bits (345), Expect = 2e-32 Identities = 73/160 (45%), Positives = 111/160 (69%) Frame = +3 Query: 126 QQPQLVLAHKLFLLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAADGVLEMDAALL 305 + P L +A FLLS P+ A V RD+++AAV+ ++MA YE+L ++D LL Sbjct: 13 KNPDLRIAQLRFLLSLPEHRGDAAV--RDELMAAVRDNNMAPYYEALCKSLDWQIDVDLL 70 Query: 306 AEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGK 485 +M+ E+E ++ DE++ DAE+NLGESE+R+A +AK+ Y R+G+KE AL + T K Sbjct: 71 NKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDK 130 Query: 486 TVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDRAKILFEE 605 TVA+G ++D+VFY L+IGLF+MD DLI+++ ++AK L EE Sbjct: 131 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEE 170
>PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (Rpn7 protein) Length = 389 Score = 118 bits (296), Expect = 1e-26 Identities = 64/161 (39%), Positives = 102/161 (63%) Frame = +3 Query: 123 KQQPQLVLAHKLFLLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAADGVLEMDAAL 302 ++ P L LA FLL+ + A L+ +L A+++++MA YE + ++ +D L Sbjct: 12 EKNPNLELAQTKFLLTLAEYKQDA--ALKAKLLEAIRTENMAPWYEHICSELGWTVDKDL 69 Query: 303 LAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEG 482 LA M+ E + D I DAE+NLGE EVREA+L KS Y R+G+K A + T Sbjct: 70 LARMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYE 129 Query: 483 KTVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDRAKILFEE 605 KTV++G ++D+VF+ +++GLF++D DLI++++D+AK L EE Sbjct: 130 KTVSLGHRLDIVFHLIRLGLFYLDHDLITRNIDKAKYLIEE 170
>PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit rpn-7) Length = 410 Score = 114 bits (285), Expect = 2e-25 Identities = 59/158 (37%), Positives = 96/158 (60%) Frame = +3 Query: 132 PQLVLAHKLFLLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAADGVLEMDAALLAE 311 P L L+ F+L+ P+VD K + + +K DMA YE + AD + +DA LA Sbjct: 27 PDLELSQTRFMLNHPEVDSSVKEAKLEKLQETIKEFDMAPFYELVCADFKIVVDATQLAA 86 Query: 312 MRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTV 491 M+ +++ + ++ DAE+NLGESEVR+ L K Y+ ++G+K+ AL+ T KTV Sbjct: 87 MKAANQKKIDEITAEVEDAEKNLGESEVRQGLLRKFEYYCQIGDKDNALKAYTATYEKTV 146 Query: 492 AVGQKMDLVFYTLQIGLFHMDFDLISKSVDRAKILFEE 605 +G ++D+VF +++GLF +D LI+K + +AK L E+ Sbjct: 147 GMGYRIDVVFAMIRVGLFFLDHHLINKFITKAKELMEQ 184
>RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7| Length = 409 Score = 72.4 bits (176), Expect = 1e-12 Identities = 41/160 (25%), Positives = 89/160 (55%), Gaps = 4/160 (2%) Frame = +3 Query: 138 LVLAHKLFLLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAAD----GVLEMDAALL 305 L ++ +F LS P +++ ++ L D + +A++ D+A LY+ L+ + ++ D+ L Sbjct: 23 LTISQAIFELSSPFLENKSQKAL-DTLFSAIRDHDLAPLYKYLSENPKTSASIDFDSNFL 81 Query: 306 AEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGK 485 M + EE+ +FD+ I DA+E GE E+ EA K+ Y+ + ++E+ ++ T + Sbjct: 82 NSMIKKNEEKLAEFDKAIEDAQELNGEHEILEAMKNKADYYTNICDRERGVQLCDETFER 141 Query: 486 TVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDRAKILFEE 605 G K+D++F +++ + D ++ + +++ K L E+ Sbjct: 142 ATLTGMKIDVLFSKIRLAYVYADMRVVGQLLEKLKPLIEK 181
>RPN7_YEAST (Q06103) 26S proteasome regulatory subunit RPN7| Length = 429 Score = 58.2 bits (139), Expect = 2e-08 Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 21/179 (11%) Frame = +3 Query: 132 PQLVLAHKLFLLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAADGV---------- 281 P ++ K FLL+Q V + + VLA +K ++MA Y+ L + + Sbjct: 22 PNYEVSEKAFLLTQSKVSIEQRKEAAEFVLAKIKEEEMAPYYKYLCEEYLVNNGQSDLEH 81 Query: 282 ----------LEMDAALLAEMRGRIEEETRKFDEKIADAEEN-LGESEVREAHLAKSLYF 428 ++ D L E+ + E + ++ +EKI EE+ GE E +A + Y+ Sbjct: 82 DEKSDSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEEDDEGELEQAQAWINLGEYY 141 Query: 429 IRVGEKEKALEQLKVTEGKTVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDRAKILFEE 605 ++G+K+ A + L + K ++ G K+D++ ++G F+ D + + ++ + E+ Sbjct: 142 AQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK 200
>MRCKB_MOUSE (Q7TT50) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)| (CDC42-binding protein kinase beta) (Myotonic dystrophy kinase-related CDC42-binding kinase beta) (Myotonic dystrophy protein kinase-like beta) (MRCK beta) (DMPK-like beta) Length = 1713 Score = 33.5 bits (75), Expect = 0.49 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = +3 Query: 282 LEMDAALLAEMRGR--IEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEK 452 LE+ +AL AE+R + ++EE RK + E L ESE + L + + +R +EK Sbjct: 877 LELQSALEAEIRAKQLVQEELRKVKDSSLAFESKLKESEAKNRELLEEMQSLRKRMEEK 935
>RAD50_PYRKO (Q5JHN1) DNA double-strand break repair rad50 ATPase| Length = 883 Score = 33.1 bits (74), Expect = 0.64 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 8/118 (6%) Frame = +3 Query: 180 VDDLAKVGLRDDVLAAVKSD---DMAALYESLAADGVLEMDAALLAEMRGRI---EEETR 341 +D+L+K R L K ++ AL E L A + A L ++ R+ EEE Sbjct: 330 IDELSKKEARVKELLKEKEGLQKELGALEEDLKAYQRAKELMANLERLKKRLTLSEEEIE 389 Query: 342 KFDEKIADAEENLGE--SEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAVGQKM 509 K + +I A E E E+ E + GE+ KAL +LK +G+ G+++ Sbjct: 390 KLEAEIQKARERKEEIMKELEEIGSRRGELKSIAGERNKALMELKKAKGRCPVCGREL 447
>AMPA_BACHK (Q6HBY2) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 494 Score = 32.7 bits (73), Expect = 0.84 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%) Frame = +3 Query: 219 LAAVKSDDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVR 398 LA+ ++ +A E + V E+D A +++ +EE+ +K +LG+++V Sbjct: 8 LASHEAVVVALFEEEKTSSFVQELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTDV- 66 Query: 399 EAHLAKSLYFIRVGEKEK-ALEQLKVTEGKT 488 K YF+ +G+KE E L+ GKT Sbjct: 67 -----KRYYFVGLGKKESYTTETLRSALGKT 92
>AMPA_BACAN (Q81XS5) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 494 Score = 32.7 bits (73), Expect = 0.84 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%) Frame = +3 Query: 219 LAAVKSDDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVR 398 LA+ ++ +A E + V E+D A +++ +EE+ +K +LG+++V Sbjct: 8 LASHEAVVVALFEEEKTSSFVQELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTDV- 66 Query: 399 EAHLAKSLYFIRVGEKEK-ALEQLKVTEGKT 488 K YF+ +G+KE E L+ GKT Sbjct: 67 -----KRYYFVGLGKKESYTTETLRSALGKT 92
>ISPE_CAUCR (Q9A8L7) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 295 Score = 32.7 bits (73), Expect = 0.84 Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +3 Query: 204 LRDDVLAAVKSDDMAALYESLAADGVLEMDA-ALLAEMRG 320 LRD + A+ DD+ AL SL ADG + A AL+AE RG Sbjct: 120 LRDALAPALSDDDLEALAASLGADGAACLRARALIAEGRG 159
>IF2P_SCHPO (Q10251) Eukaryotic translation initiation factor 5B (eIF-5B)| (Translation initiation factor IF-2) Length = 1079 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/69 (34%), Positives = 36/69 (52%) Frame = +3 Query: 300 LLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTE 479 +L E R R EEE R +E+ AEE +EV EA K ++ EKE+ ++ + Sbjct: 253 MLEEKRAREEEEQRIREEEARIAEEEKRLAEVEEAR--KEEARLKKKEKERKKKEEMKAQ 310 Query: 480 GKTVAVGQK 506 GK ++ QK Sbjct: 311 GKYLSKKQK 319
>LEU2_CLOAB (Q97EE0) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 422 Score = 32.3 bits (72), Expect = 1.1 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = +3 Query: 258 ESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLA---KSLYF 428 E+ A +G+ +D + M+GR + E +KF DA+E+ S V E L+ ++ F Sbjct: 222 EAGAKNGIFPVDEKTIEYMKGRSDRELKKF-----DADEDAEYSRVIEIDLSTLKPTVAF 276 Query: 429 IRVGEKEKALEQLKVTEGKTVAVG 500 + E K ++Q+ V +G Sbjct: 277 PHLPENTKTIDQVGEVNVDQVVIG 300
>ASSY_SYNPX (Q7U3B9) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 403 Score = 31.6 bits (70), Expect = 1.9 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = -1 Query: 350 VELAGLLLDPAAHLREQRRVHLQHAVGRQRLVQRRHVIGFHCGE 219 V + G +LDP A +RE R+ H +GR +++ R V+G E Sbjct: 230 VAINGQVLDPVAMIREANRLAGSHGIGRLDMIENR-VVGIKSRE 272
>LACD2_STRMU (Q8DWE5) Tagatose 1,6-diphosphate aldolase 2 (EC 4.1.2.40)| (Tagatose-bisphosphate aldolase 2) (D-tagatose-1,6-bisphosphate aldolase 2) Length = 329 Score = 31.2 bits (69), Expect = 2.4 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Frame = +3 Query: 162 LLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAADGVLEMDAALLAEMRGRIEEETR 341 +LSQ + LAKV + V++A+ D AL +A + E A + E++ + EE Sbjct: 2 ILSQQKYNYLAKVSDSNGVISALAFDQRGALKCLMAQYQMKEPTVAQMEELKVLVSEELT 61 Query: 342 KFDEKI-ADAEENLGESEVREAHLAKSLYFIRVG 440 + I D E L ++ R+ L + + G Sbjct: 62 PYASSILLDPEYGLPAAQARDREAGLLLAYEKTG 95
>CP135_HUMAN (Q66GS9) Centrosomal protein of 135 kDa (Cep135 protein)| (Centrosomal protein 4) Length = 1140 Score = 30.8 bits (68), Expect = 3.2 Identities = 30/110 (27%), Positives = 51/110 (46%) Frame = +3 Query: 276 GVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKA 455 GV++ + L E ++E+T EKIA+ +ENL E A + I + E E + Sbjct: 730 GVIDKEKDFLQET---VDEKT----EKIANLQENLANKEKAVAQMK-----IMISECESS 777 Query: 456 LEQLKVTEGKTVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDRAKILFEE 605 + QLK T V + ++ Q+ H + D + +S +I F+E Sbjct: 778 VNQLKET-----LVNRDREINSLRRQLDAAHKELDEVGRS---REIAFKE 819
>SYT_THET2 (Q72HH1) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 659 Score = 30.8 bits (68), Expect = 3.2 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = +3 Query: 279 VLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKAL 458 V E E+ GR++E + + AD ++ +R+A + K Y + VGE+EKA Sbjct: 565 VSEKQEGYAREVAGRLKEAGLRAE---ADTRPERMQARIRDAEVQKVPYVLVVGEREKAE 621 Query: 459 EQLKVTEGKTVAVG 500 + V K +G Sbjct: 622 GAVSVRRRKKGNLG 635
>SYTM_ARATH (O04630) Threonyl-tRNA synthetase, mitochondrial precursor (EC| 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) Length = 709 Score = 30.8 bits (68), Expect = 3.2 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 12/62 (19%) Frame = +3 Query: 324 IEEETRKFDEKI------------ADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQL 467 I E+++++ EK+ AD + + +VREA LA+ Y + VGE E A Q+ Sbjct: 620 ISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKVREAQLAQYNYILVVGETEAATGQV 679 Query: 468 KV 473 V Sbjct: 680 SV 681
>MUTS2_CLOAB (Q97GM6) MutS2 protein| Length = 788 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +3 Query: 306 AEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSL 422 +E R R++E +K EK+ +AEE+L SE + KS+ Sbjct: 601 SEARQRLQESRQKLKEKLNNAEESLNISERDQGEALKSV 639
>RRBP1_MOUSE (Q99PL5) Ribosome-binding protein 1 (Ribosome receptor protein)| (mRRp) Length = 1605 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +3 Query: 279 VLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHL 410 +L +L +++ +EEE R + K+ AEE L +S V HL Sbjct: 1333 ILAETEGMLKDLQKSVEEEERVWKAKVGAAEEELHKSRVTVKHL 1376
>SYT_THET8 (P56881) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 659 Score = 30.4 bits (67), Expect = 4.2 Identities = 19/64 (29%), Positives = 33/64 (51%) Frame = +3 Query: 309 EMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKT 488 E+ GR++E + + AD ++ +R+A + K Y + VGE+EKA + V K Sbjct: 575 EVAGRLKEAGLRAE---ADTRPERMQARIRDAEVQKVPYILVVGEREKAEGAVSVRRRKK 631 Query: 489 VAVG 500 +G Sbjct: 632 GNLG 635
>CLPE_STRPN (P35594) ATP-dependent Clp protease ATP-binding subunit clpE| (Exported protein 4) Length = 752 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/58 (27%), Positives = 31/58 (53%) Frame = +3 Query: 333 ETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAVGQK 506 + + D+++ +AE NL RE K+ YF K K +++ K+T+ T ++ +K Sbjct: 360 DPKVIDQRLIEAE-NLKSQATREEDFEKAAYFRDQIAKYKEMQKKKITDQDTPSISEK 416
>AMPA_BACCR (Q816E3) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 494 Score = 30.0 bits (66), Expect = 5.4 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Frame = +3 Query: 219 LAAVKSDDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVR 398 LA ++ +A E + V E+D A +++ +EE+ +K +LG++ V Sbjct: 8 LAGHEAVIVALFEEEKMSSFVQELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTNV- 66 Query: 399 EAHLAKSLYFIRVGEKEK-ALEQLKVTEGK 485 K YF+ +G+KE E L+ GK Sbjct: 67 -----KRYYFVGLGKKESYTTETLRAALGK 91
>RNC_LACSS (Q38XR8) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 230 Score = 30.0 bits (66), Expect = 5.4 Identities = 25/80 (31%), Positives = 36/80 (45%) Frame = +3 Query: 231 KSDDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHL 410 ++D L E L DG +E+D LLAE+ R+F+ + + LG R Sbjct: 159 QTDYKTNLQEFLQQDGEIEIDYQLLAEVG---PSHDRQFEVDVLVGDRVLGSGVGRNKKA 215 Query: 411 AKSLYFIRVGEKEKALEQLK 470 A+ +KALEQLK Sbjct: 216 AEQ------AAAKKALEQLK 229
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 30.0 bits (66), Expect = 5.4 Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Frame = -2 Query: 502 CPTATVLPSVTLSCSSAFS-----------------FSPTLMKYKDLARWASRTSLSPKF 374 CP+++ LP+ TLS +S F+ T + +S + +SP Sbjct: 111 CPSSSTLPTTTLSVTSKFTSYICPTCHTTAISSLSEVGTTTVVSSSAIEPSSASIISPVT 170 Query: 373 SSASAIFSSNLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDFTAARTSSRRPTL 194 S+ S+ SSN S T++ ++S P+ Sbjct: 171 STLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPS- 229 Query: 193 ARSSTSGCERRNSLCASTS 137 + S++S +S STS Sbjct: 230 STSTSSSLTSTSSSSTSTS 248
>YHES_ECOLI (P63389) Hypothetical ABC transporter ATP-binding protein yheS| Length = 637 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%) Frame = +3 Query: 321 RIEEETRKFDEKIADAEENLGESEV----REAHLAKSL 422 R+E+E K + ++A AEE LG+SE+ R+A L L Sbjct: 566 RLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACL 603
>YHES_ECO57 (P63390) Hypothetical ABC transporter ATP-binding protein yheS| Length = 637 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%) Frame = +3 Query: 321 RIEEETRKFDEKIADAEENLGESEV----REAHLAKSL 422 R+E+E K + ++A AEE LG+SE+ R+A L L Sbjct: 566 RLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACL 603
>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)| Length = 2567 Score = 30.0 bits (66), Expect = 5.4 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 2/149 (1%) Frame = +3 Query: 123 KQQPQLVLAHKLFLLSQPDVDDLAKVGLRDDVLAAVKSDDMAALYESLAADGVLEMDAAL 302 KQQ +++ HK LL P + + GL++ + S E E Sbjct: 1659 KQQVEMLQDHKRELLGSPSLGENCVAGLKERLWKLESS-----ALEQQKIQSQQENTIKQ 1713 Query: 303 LAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEG 482 L ++R R E E E++ + E + E + R+ + E LEQ E Sbjct: 1714 LEQLRQRFELEI----ERMKQMHQKDREDQEEELEDVRQSCQKRLHQLEMQLEQ--EYEE 1767 Query: 483 KTVAVGQKMDL--VFYTLQIGLFHMDFDL 563 K + + +K DL + TL + H DFD+ Sbjct: 1768 KQMVLHEKQDLEGLIGTLCDQIGHRDFDV 1796
>SWAP_CAEEL (Q10580) Protein SWAP (Suppressor of white apricot protein homolog)| Length = 749 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 3/34 (8%) Frame = +3 Query: 309 EMRGRIEEETRKFDEKIADA---EENLGESEVRE 401 E R ++EEETRK EKI+++ +N G S+ RE Sbjct: 616 EERSKLEEETRKKAEKISESLSERKNTGRSDRRE 649
>GREA_RHILO (Q98I49) Transcription elongation factor greA (Transcript cleavage| factor greA) Length = 157 Score = 29.6 bits (65), Expect = 7.1 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = +3 Query: 294 AALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAK---SLYFIRVGEKEKALEQ 464 A+L E+R R +EE + E I++A + SE E H AK SL RV E E + + Sbjct: 12 ASLKEELRWRQQEERPRIIEAISEARSHGDLSENAEYHAAKEAQSLNEGRVNELEDLIAR 71 Query: 465 LKVTE 479 +V + Sbjct: 72 AEVID 76
>CENB2_HUMAN (Q15057) Centaurin-beta 2 (Cnt-b2)| Length = 778 Score = 29.6 bits (65), Expect = 7.1 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 21/152 (13%) Frame = +3 Query: 180 VDDLAKVGLRDDVLAAVKSDDMAALYESLAADGVL--EMDAALLAEMRGRIEEETRKFD- 350 + DLA+ D V+ + +L E + +L + ++ A+++ ++E+ RKF Sbjct: 63 IRDLAQYSSNDAVVETSLTKFSDSLQEMINFHTILFDQTQRSIKAQLQNFVKEDLRKFKD 122 Query: 351 -----EKIADAEENL----------GESEVREAHLAKSLYFIRVGEKEKALE---QLKVT 476 EK+++ +EN + EV EA L R + AL+ Q+ V Sbjct: 123 AKKQFEKVSEEKENALVKNAQVQRNKQHEVEEA--TNILTATRKCFRHIALDYVLQINVL 180 Query: 477 EGKTVAVGQKMDLVFYTLQIGLFHMDFDLISK 572 + K + K L F + FH +DL S+ Sbjct: 181 QSKRRSEILKSMLSFMYAHLAFFHQGYDLFSE 212
>TPM1_HYDAT (P39921) Tropomyosin-1 (Tropomyosin I)| Length = 253 Score = 29.6 bits (65), Expect = 7.1 Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Frame = +3 Query: 282 LEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKAL- 458 LE + + + R + EEE + DEKI + EE E +V++ L ++ +R E+ + Sbjct: 83 LEDVSESVKQARNQYEEEEAESDEKIQNLEE---EVKVKKRELEENEIKLREKERRNVVV 139 Query: 459 -EQLKVTEGKTVAVGQKMDLVFYTLQIGL 542 ++ K A+ ++++++ T++ GL Sbjct: 140 HRDIEAATVKADAIEKRIEILENTIKNGL 168
>GAS7_RAT (O55148) Growth-arrest-specific protein 7 (GAS-7)| Length = 422 Score = 29.6 bits (65), Expect = 7.1 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = +3 Query: 303 LAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKV 473 L R +++ +K D IAD + LGES A+ R + E +QL++ Sbjct: 249 LMNFRENFKKDMKKCDHHIADLRKQLGESRYASVEKARKALTERQKDLEMKTQQLEI 305
>SYV_BACHK (Q6HD68) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = +3 Query: 291 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 470 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867 Query: 471 VTE 479 E Sbjct: 868 KRE 870
>SYV_BACCZ (Q633Y6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = +3 Query: 291 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 470 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867 Query: 471 VTE 479 E Sbjct: 868 KRE 870
>SYV_BACCR (Q817R6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = +3 Query: 291 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 470 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867 Query: 471 VTE 479 E Sbjct: 868 KRE 870
>SYV_BACC1 (Q72ZW8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = +3 Query: 291 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 470 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867 Query: 471 VTE 479 E Sbjct: 868 KRE 870
>SYV_BACAN (Q81LD3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = +3 Query: 291 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 470 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867 Query: 471 VTE 479 E Sbjct: 868 KRE 870
>AMPA_BACC1 (Q72YG1) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 494 Score = 29.3 bits (64), Expect = 9.3 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Frame = +3 Query: 243 MAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSL 422 +A E + V E+D A +++ +EE+ +K +LG++ V K Sbjct: 16 VALFEEEKTSSFVKELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTNV------KRY 69 Query: 423 YFIRVGEKEK-ALEQLKVTEGK 485 YF+ +G+KE E L+ GK Sbjct: 70 YFVGLGKKESYTTEILRAALGK 91
>INCE_CHICK (P53352) Inner centromere protein| Length = 877 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%) Frame = +3 Query: 309 EMRGRIEEETRKFDEKIADA-EENLGESEVREAHLAKSLYFIRV-------GEKEKALEQ 464 E + RIE++ FDEK A EE L E ++++ AK + K+KAL+Q Sbjct: 562 ERKRRIEQKLALFDEKTEKAREERLAEEKIKKRAAAKKMEEAEARRRQDEEARKQKALQQ 621 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,350,362 Number of Sequences: 219361 Number of extensions: 987086 Number of successful extensions: 4230 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 4062 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4223 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
