ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49b07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464328.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1335 Score = 180 bits (91), Expect = 8e-43 Identities = 115/123 (93%) Strand = Plus / Plus Query: 33 gccgccgtcgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctc 92 ||||||||||||||||||||||| |||||||| ||||| || || ||||||||||||||| Sbjct: 106 gccgccgtcgtctgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctc 165 Query: 93 ctcctcgcccgcggctacgccgtccgcggcacctcccgccgcgcagatgaccccaagaac 152 |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 166 ctcctcgcccgcggctacgccgtccgcggcacatcccgccgcgccgatgacccgaagaac 225 Query: 153 gcg 155 ||| Sbjct: 226 gcg 228
>dbj|AK070746.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M01, full insert sequence Length = 1335 Score = 180 bits (91), Expect = 8e-43 Identities = 115/123 (93%) Strand = Plus / Plus Query: 33 gccgccgtcgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctc 92 ||||||||||||||||||||||| |||||||| ||||| || || ||||||||||||||| Sbjct: 106 gccgccgtcgtctgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctc 165 Query: 93 ctcctcgcccgcggctacgccgtccgcggcacctcccgccgcgcagatgaccccaagaac 152 |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 166 ctcctcgcccgcggctacgccgtccgcggcacatcccgccgcgccgatgacccgaagaac 225 Query: 153 gcg 155 ||| Sbjct: 226 gcg 228
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 159 bits (80), Expect = 3e-36 Identities = 98/104 (94%) Strand = Plus / Plus Query: 33 gccgccgtcgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctc 92 ||||||||||||||||||||||| |||||||| ||||| || || ||||||||||||||| Sbjct: 4497216 gccgccgtcgtctgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctc 4497275 Query: 93 ctcctcgcccgcggctacgccgtccgcggcacctcccgccgcgc 136 |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4497276 ctcctcgcccgcggctacgccgtccgcggcacatcccgccgcgc 4497319 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 133 gcgcagatgaccccaagaacgcg 155 ||||||||||||| ||||||||| Sbjct: 4497409 gcgcagatgacccgaagaacgcg 4497431
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 159 bits (80), Expect = 3e-36 Identities = 98/104 (94%) Strand = Plus / Plus Query: 33 gccgccgtcgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctc 92 ||||||||||||||||||||||| |||||||| ||||| || || ||||||||||||||| Sbjct: 32595 gccgccgtcgtctgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctc 32654 Query: 93 ctcctcgcccgcggctacgccgtccgcggcacctcccgccgcgc 136 |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 32655 ctcctcgcccgcggctacgccgtccgcggcacatcccgccgcgc 32698 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 133 gcgcagatgaccccaagaacgcg 155 ||||||||||||| ||||||||| Sbjct: 32788 gcgcagatgacccgaagaacgcg 32810
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 99.6 bits (50), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 40 tcgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 |||| ||||||||||| |||||||| ||||| ||||| ||| ||||||||||||||||| Sbjct: 35495 tcgtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctct 35554 Query: 100 cccgcggctacgccgtcc 117 |||||||||||||||||| Sbjct: 35555 cccgcggctacgccgtcc 35572 Score = 87.7 bits (44), Expect = 9e-15 Identities = 71/80 (88%) Strand = Plus / Plus Query: 38 cgtcgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcct 97 |||||| ||||||||||| |||||||| ||| | ||||| ||| ||||| |||||||||| Sbjct: 16251 cgtcgtgtgcgtcaccggcgccggcgggttcgtcggctcgtggctcgtcgagctcctcct 16310 Query: 98 cgcccgcggctacgccgtcc 117 | |||||||||||||||||| Sbjct: 16311 ctcccgcggctacgccgtcc 16330 Score = 85.7 bits (43), Expect = 4e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||||||||| |||||||| ||||| ||||| ||| ||||||||||||||||| |||| Sbjct: 26413 tgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcccgt 26472 Query: 105 ggctacgccgt 115 ||||||||||| Sbjct: 26473 ggctacgccgt 26483 Score = 81.8 bits (41), Expect = 6e-13 Identities = 65/73 (89%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||||||||||| |||||| ||||| | ||||||| |||||||||| |||||| |||| Sbjct: 6413 tgcgtcaccggaggcggcgggttcatcgcctcctggctcgtcaagctgctcctctcccgt 6472 Query: 105 ggctacgccgtcc 117 ||||||||||||| Sbjct: 6473 ggctacgccgtcc 6485 Score = 73.8 bits (37), Expect = 1e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||| ||||| |||||||| |||| ||||| ||| ||||||||||||||||| |||| Sbjct: 42150 tgcgtgaccggcgccggcgggttcaccggctcgtggctcgtcaagctcctcctctcccgt 42209 Query: 105 ggctacgccgtcc 117 ||||||||||||| Sbjct: 42210 ggctacgccgtcc 42222 Score = 67.9 bits (34), Expect = 8e-09 Identities = 58/66 (87%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||||||||| |||||||| ||||| ||||| ||| ||||||| ||||||||| || || Sbjct: 21828 tgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaatctcctcctctcctgc 21887 Query: 105 ggctac 110 |||||| Sbjct: 21888 ggctac 21893 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 38 cgtcgtctgcgtcaccggagccggcgg 64 |||||| ||||||||||| |||||||| Sbjct: 37739 cgtcgtgtgcgtcaccggtgccggcgg 37765
>dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E03, full insert sequence Length = 1272 Score = 87.7 bits (44), Expect = 9e-15 Identities = 71/80 (88%) Strand = Plus / Plus Query: 38 cgtcgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcct 97 |||||| ||||||||||| |||||||| ||| | ||||| ||| ||||| |||||||||| Sbjct: 101 cgtcgtgtgcgtcaccggcgccggcgggttcgtcggctcgtggctcgtcgagctcctcct 160 Query: 98 cgcccgcggctacgccgtcc 117 | |||||||||||||||||| Sbjct: 161 ctcccgcggctacgccgtcc 180
>dbj|AK073442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G18, full insert sequence Length = 1342 Score = 85.7 bits (43), Expect = 4e-14 Identities = 94/111 (84%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||| ||||| |||||||| |||| ||||| ||| ||||||||||||||||| |||| Sbjct: 94 tgcgtgaccggcgccggcgggttcaccggctcgtggctcgtcaagctcctcctctcccgt 153 Query: 105 ggctacgccgtccgcggcacctcccgccgcgcagatgaccccaagaacgcg 155 ||||||||||||| || |||| |||| | ||||||| |||||||||||| Sbjct: 154 ggctacgccgtccacgccaccctccgcgacccagatgatcccaagaacgcg 204
>dbj|AK068648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159B10, full insert sequence Length = 1452 Score = 85.7 bits (43), Expect = 4e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||||||||| |||||||| ||||| ||||| ||| ||||||||||||||||| |||| Sbjct: 134 tgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcccgt 193 Query: 105 ggctacgccgt 115 ||||||||||| Sbjct: 194 ggctacgccgt 204
>dbj|AK062138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F11, full insert sequence Length = 1270 Score = 85.7 bits (43), Expect = 4e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||||||||| |||||||| ||||| ||||| ||| ||||||||||||||||| |||| Sbjct: 133 tgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcccgt 192 Query: 105 ggctacgccgt 115 ||||||||||| Sbjct: 193 ggctacgccgt 203
>emb|AJ440712.1|LAL440712 Linum album mRNA for cinnamoyl-CoA reductase (ccr gene) Length = 1488 Score = 81.8 bits (41), Expect = 6e-13 Identities = 53/57 (92%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcct 97 ||||||||||||||| |||||||||||||| | ||||||||||||||| |||||||| Sbjct: 159 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggatcgtcaaactcctcct 215
>gb|AF297877.1|AF297877 Eucalyptus saligna cinnamoyl-CoA reductase (ccr) gene, complete cds Length = 3016 Score = 77.8 bits (39), Expect = 9e-12 Identities = 54/59 (91%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||||||| |||||||||||||| | ||||||||| |||||||| ||||||| Sbjct: 130 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcg 188
>gb|AY098581.1|AY098581S1 Eucalyptus globulus cinnamoyl CoA reductase (CCR) gene, exons 1 and 2 Length = 771 Score = 77.8 bits (39), Expect = 9e-12 Identities = 54/59 (91%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||||||| |||||||||||||| | ||||||||| |||||||| ||||||| Sbjct: 36 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcg 94
>gb|AY656821.1| Eucalyptus globulus voucher UTAS1580 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3213 Score = 77.8 bits (39), Expect = 9e-12 Identities = 54/59 (91%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||||||| |||||||||||||| | ||||||||| |||||||| ||||||| Sbjct: 101 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagctgctcctcg 159
>gb|AY656820.1| Eucalyptus globulus voucher UTAS1042 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3230 Score = 77.8 bits (39), Expect = 9e-12 Identities = 54/59 (91%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||||||| |||||||||||||| | ||||||||| |||||||| ||||||| Sbjct: 80 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagctgctcctcg 138
>gb|AY656819.1| Eucalyptus globulus voucher UTAS1270 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3051 Score = 77.8 bits (39), Expect = 9e-12 Identities = 54/59 (91%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||||||| |||||||||||||| | ||||||||| |||||||| ||||||| Sbjct: 73 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcg 131
>gb|AY656818.1| Eucalyptus globulus voucher UTAS1180 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3074 Score = 77.8 bits (39), Expect = 9e-12 Identities = 54/59 (91%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||||||| |||||||||||||| | ||||||||| |||||||| ||||||| Sbjct: 70 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagctgctcctcg 128
>emb|AJ234689.1|HVU234689 Hordeum vulgare genomic DNA fragment; clone MWG0973.uni Length = 218 Score = 75.8 bits (38), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 40 tcgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 |||||||||||||||| | | |||||||||| ||||||||| ||||| |||||||||| Sbjct: 202 tcgtctgcgtcaccggcggcagcggcttcatcggctcctggctcgtccgcctcctcctcg 143 Query: 100 cccgcggctacgccgtcc 117 |||||||||| |||||| Sbjct: 142 accgcggctacaccgtcc 125
>ref|XM_481219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1420 Score = 73.8 bits (37), Expect = 1e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgc 100 ||||||||||||||| |||||||| ||||| | || ||| |||||||||||||||||| Sbjct: 210 cgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctcga 269 Query: 101 ccgcggctacgccgtccgcggcacc 125 ||||||||||||||||||||| Sbjct: 270 gaagggctacgccgtccgcggcacc 294
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 73.8 bits (37), Expect = 1e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgc 100 ||||||||||||||| |||||||| ||||| | || ||| |||||||||||||||||| Sbjct: 10712448 cgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctcga 10712507 Query: 101 ccgcggctacgccgtccgcggcacc 125 ||||||||||||||||||||| Sbjct: 10712508 gaagggctacgccgtccgcggcacc 10712532 Score = 44.1 bits (22), Expect = 0.12 Identities = 46/54 (85%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctc 98 ||||||||||| |||||||| ||| | | ||| ||| | ||||||||||||||| Sbjct: 4893879 tgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctc 4893826 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccg 114 |||| |||||||||||||||||| Sbjct: 4575843 cctcatcgcccgcggctacgccg 4575865
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 73.8 bits (37), Expect = 1e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgc 100 ||||||||||||||| |||||||| ||||| | || ||| |||||||||||||||||| Sbjct: 9580 cgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctcga 9639 Query: 101 ccgcggctacgccgtccgcggcacc 125 ||||||||||||||||||||| Sbjct: 9640 gaagggctacgccgtccgcggcacc 9664
>dbj|AK106439.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D08, full insert sequence Length = 1420 Score = 73.8 bits (37), Expect = 1e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgc 100 ||||||||||||||| |||||||| ||||| | || ||| |||||||||||||||||| Sbjct: 210 cgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctcga 269 Query: 101 ccgcggctacgccgtccgcggcacc 125 ||||||||||||||||||||| Sbjct: 270 gaagggctacgccgtccgcggcacc 294
>emb|X97433.1|EGCCR1GEN E.gunnii CCR1 gene Length = 3202 Score = 69.9 bits (35), Expect = 2e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||| |||||||||||||| | ||||||||| |||||||| ||||||| Sbjct: 231 tgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcg 285
>emb|X79566.1|EGCCR E.gunnii CCR mRNA Length = 1210 Score = 69.9 bits (35), Expect = 2e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||||||| |||||||| ||||| | ||||||||| |||||||| ||||||| Sbjct: 81 cgtctgcgtcaccggcgccggcgggttcatcgcctcctggattgtcaagcttctcctcg 139
>gb|AY656817.1| Eucalyptus cordata voucher UTAS1498 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3042 Score = 67.9 bits (34), Expect = 8e-09 Identities = 51/58 (87%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctc 98 ||| || |||||||| |||||||||||||| | ||||||||| |||||||| |||||| Sbjct: 77 cgtstgygtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctc 134
>ref|NM_106730.2| Arabidopsis thaliana CCR2 (CINNAMOYL COA REDUCTASE) AT1G80820 (CCR2) mRNA, complete cds Length = 1282 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 40 tcgtctgcgtcaccggagccggcggcttcattggctcctggatcgt 85 ||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 93 tcgtctgcgtcaccggagccggcggctacattgcttcttggatcgt 138
>gb|AF320623.1|AF320623 Arabidopsis thaliana cinnamoyl CoA reductase CCR2 mRNA, complete cds Length = 1216 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 40 tcgtctgcgtcaccggagccggcggcttcattggctcctggatcgt 85 ||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 82 tcgtctgcgtcaccggagccggcggctacattgcttcttggatcgt 127
>gb|BT005826.1| Arabidopsis thaliana At1g80820 gene, complete cds Length = 999 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 40 tcgtctgcgtcaccggagccggcggcttcattggctcctggatcgt 85 ||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 20 tcgtctgcgtcaccggagccggcggctacattgcttcttggatcgt 65
>gb|AY087148.1| Arabidopsis thaliana clone 32255 mRNA, complete sequence Length = 1272 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 40 tcgtctgcgtcaccggagccggcggcttcattggctcctggatcgt 85 ||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 93 tcgtctgcgtcaccggagccggcggctacattgcttcttggatcgt 138
>gb|AC011713.2|F23A5 Arabidopsis thaliana chromosome 1 BAC F23A5 sequence, complete sequence Length = 109694 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 40 tcgtctgcgtcaccggagccggcggcttcattggctcctggatcgt 85 ||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 54648 tcgtctgcgtcaccggagccggcggctacattgcttcttggatcgt 54693
>gb|AY771357.1| Triticum aestivum cultivar H4564 cinnamoyl-CoA reductase mRNA, complete cds Length = 1489 Score = 58.0 bits (29), Expect = 8e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcct 97 ||||||||||| |||||||||||||| | ||| ||| ||||||||| |||||| Sbjct: 218 tgcgtcaccggcgccggcggcttcatcgcctcgtggctcgtcaagcgcctcct 270
>gb|AY108351.1| Zea mays PCO122024 mRNA sequence Length = 1233 Score = 58.0 bits (29), Expect = 8e-06 Identities = 59/69 (85%) Strand = Plus / Plus Query: 57 gccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgcggctacgccgtc 116 |||||||| | ||| | ||| ||| ||||||||||||||||| |||| |||||| ||||| Sbjct: 152 gccggcgggtacatcgcctcgtggctcgtcaagctcctcctctcccgtggctacaccgtc 211 Query: 117 cgcggcacc 125 | ||||||| Sbjct: 212 cacggcacc 220
>emb|AJ413278.1|RSI413278 Rhododendron simsii partial mRNA for dihydroflavonol reductase (dfr gene) Length = 1035 Score = 54.0 bits (27), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 41 cgtctgcgtcaccggagccggcggcttcattggctcctggatcgtca 87 ||||||||||||||| |||| ||||||||| ||||| ||| |||||| Sbjct: 33 cgtctgcgtcaccggtgccgccggcttcatcggctcatggctcgtca 79
>gb|AY109696.1| Zea mays CL11616_3 mRNA sequence Length = 986 Score = 54.0 bits (27), Expect = 1e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 75 tcctggatcgtcaagctcctcctcgcccgcggctacgccgtccgcggcacc 125 ||||||||||| | ||||||||||| ||| |||||| ||||||||| |||| Sbjct: 728 tcctggatcgttaggctcctcctcgaccgtggctacaccgtccgcgccacc 678
>ref|NM_193168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1359 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Plus Query: 82 tcgtcaagctcctcctcgcccgcggctacgccgtccgcggcacc 125 |||||| ||| |||||||||||||||||| | ||||||| |||| Sbjct: 431 tcgtcaggctgctcctcgcccgcggctacacggtccgcgccacc 474
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.008 Identities = 54/64 (84%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||| ||||| ||||| |||||| | | || ||| ||||||||||||||||| ||||| Sbjct: 24706378 tgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctcccgc 24706319 Query: 105 ggct 108 |||| Sbjct: 24706318 ggct 24706315 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttc 68 ||||||||||| |||||||||||| Sbjct: 24687293 tgcgtcaccggcgccggcggcttc 24687270
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Plus Query: 82 tcgtcaagctcctcctcgcccgcggctacgccgtccgcggcacc 125 |||||| ||| |||||||||||||||||| | ||||||| |||| Sbjct: 19006073 tcgtcaggctgctcctcgcccgcggctacacggtccgcgccacc 19006116
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129H01 Length = 101104 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Plus Query: 82 tcgtcaagctcctcctcgcccgcggctacgccgtccgcggcacc 125 |||||| ||| |||||||||||||||||| | ||||||| |||| Sbjct: 63116 tcgtcaggctgctcctcgcccgcggctacacggtccgcgccacc 63159
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 48.1 bits (24), Expect = 0.008 Identities = 54/64 (84%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||| ||||| ||||| |||||| | | || ||| ||||||||||||||||| ||||| Sbjct: 40059 tgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctcccgc 40000 Query: 105 ggct 108 |||| Sbjct: 39999 ggct 39996 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttc 68 ||||||||||| |||||||||||| Sbjct: 20974 tgcgtcaccggcgccggcggcttc 20951
>dbj|AK073641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052J24, full insert sequence Length = 1232 Score = 48.1 bits (24), Expect = 0.008 Identities = 54/64 (84%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||| ||||| ||||| |||||| | | || ||| ||||||||||||||||| ||||| Sbjct: 58 tgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctcccgc 117 Query: 105 ggct 108 |||| Sbjct: 118 ggct 121
>dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162A03, full insert sequence Length = 1334 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Plus Query: 82 tcgtcaagctcctcctcgcccgcggctacgccgtccgcggcacc 125 |||||| ||| |||||||||||||||||| | ||||||| |||| Sbjct: 244 tcgtcaggctgctcctcgcccgcggctacacggtccgcgccacc 287
>dbj|AK063958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-G03, full insert sequence Length = 1737 Score = 48.1 bits (24), Expect = 0.008 Identities = 54/64 (84%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcgcccgc 104 ||||| ||||| ||||| |||||| | | || ||| ||||||||||||||||| ||||| Sbjct: 505 tgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctcccgc 564 Query: 105 ggct 108 |||| Sbjct: 565 ggct 568
>dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F12, full insert sequence Length = 1322 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Plus Query: 82 tcgtcaagctcctcctcgcccgcggctacgccgtccgcggcacc 125 |||||| ||| |||||||||||||||||| | ||||||| |||| Sbjct: 256 tcgtcaggctgctcctcgcccgcggctacacggtccgcgccacc 299
>ref|XM_450149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 46.1 bits (23), Expect = 0.031 Identities = 47/55 (85%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||| |||||||| ||||| | || ||| ||||||||| |||||||| Sbjct: 276 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctcg 330
>gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complete sequence Length = 115385 Score = 46.1 bits (23), Expect = 0.031 Identities = 23/23 (100%) Strand = Plus / Plus Query: 7 cctctgtccgctcaggcgtggcc 29 ||||||||||||||||||||||| Sbjct: 1688 cctctgtccgctcaggcgtggcc 1710
>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence Length = 127223 Score = 46.1 bits (23), Expect = 0.031 Identities = 23/23 (100%) Strand = Plus / Plus Query: 7 cctctgtccgctcaggcgtggcc 29 ||||||||||||||||||||||| Sbjct: 93109 cctctgtccgctcaggcgtggcc 93131
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.031 Identities = 47/55 (85%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||| |||||||| ||||| | || ||| ||||||||| |||||||| Sbjct: 2033010 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctcg 2032956
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 46.1 bits (23), Expect = 0.031 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 accggagccggcggcttcattggctcc 77 |||||||||||||||||||| |||||| Sbjct: 53445 accggagccggcggcttcatcggctcc 53471
>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1352_A10 Length = 111655 Score = 46.1 bits (23), Expect = 0.031 Identities = 47/55 (85%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||| |||||||| ||||| | || ||| ||||||||| |||||||| Sbjct: 68377 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctcg 68323
>dbj|AK100234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051O20, full insert sequence Length = 1612 Score = 46.1 bits (23), Expect = 0.031 Identities = 47/55 (85%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctcg 99 ||||||||||| |||||||| ||||| | || ||| ||||||||| |||||||| Sbjct: 276 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctcg 330
>ref|XM_480400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 44.1 bits (22), Expect = 0.12 Identities = 46/54 (85%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctc 98 ||||||||||| |||||||| ||| | | ||| ||| | ||||||||||||||| Sbjct: 37 tgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctc 90
>ref|XM_470116.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1005 Score = 44.1 bits (22), Expect = 0.12 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccgtcc 117 ||||||||||||||||||| |||||| Sbjct: 90 cctcctcgcccgcggctactccgtcc 115
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.12 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccgtcc 117 ||||||||||||||||||| |||||| Sbjct: 34036547 cctcctcgcccgcggctactccgtcc 34036572
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.12 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccgtcc 117 ||||||||||||||||||| |||||| Sbjct: 34127019 cctcctcgcccgcggctactccgtcc 34127044
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 44.1 bits (22), Expect = 0.12 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccgtcc 117 ||||||||||||||||||| |||||| Sbjct: 359 cctcctcgcccgcggctactccgtcc 384
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 44.1 bits (22), Expect = 0.12 Identities = 25/26 (96%) Strand = Plus / Minus Query: 92 cctcctcgcccgcggctacgccgtcc 117 ||||||||||||||||||| |||||| Sbjct: 21144 cctcctcgcccgcggctactccgtcc 21119
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 44.1 bits (22), Expect = 0.12 Identities = 46/54 (85%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctc 98 ||||||||||| |||||||| ||| | | ||| ||| | ||||||||||||||| Sbjct: 53133 tgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctc 53080
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 44.1 bits (22), Expect = 0.12 Identities = 46/54 (85%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtcaagctcctcctc 98 ||||||||||| |||||||| ||| | | ||| ||| | ||||||||||||||| Sbjct: 98673 tgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctc 98620
>dbj|AK058641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E01, full insert sequence Length = 1248 Score = 44.1 bits (22), Expect = 0.12 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccgtcc 117 ||||||||||||||||||| |||||| Sbjct: 147 cctcctcgcccgcggctactccgtcc 172
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 0.48 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 accggagccggcggcttcatt 71 ||||||||||||||||||||| Sbjct: 344072 accggagccggcggcttcatt 344052
>ref|XM_512408.1| PREDICTED: Pan troglodytes similar to Mannosidase, alpha, class 2B, member 1 (LOC455745), mRNA Length = 3231 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 1565 acgccgtcagcggcacctcccgcc 1588
>ref|XM_479046.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1393 Score = 40.1 bits (20), Expect = 1.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattg 72 |||||||||||||||| ||||| ||||| Sbjct: 64 tgcgtcaccggagccgccggctacattg 91
>gb|AY017791.1| Oryza sativa microsatellite MRG0116 containing (AG)X12, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 1.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattg 72 |||||||||||||||| ||||| ||||| Sbjct: 222 tgcgtcaccggagccgccggctacattg 195
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 gctcctcctcgcccgcggct 108 |||||||||||||||||||| Sbjct: 1894573 gctcctcctcgcccgcggct 1894592
>gb|BC000736.2| Homo sapiens mannosidase, alpha, class 2B, member 1, mRNA (cDNA clone MGC:2113 IMAGE:3504417), complete cds Length = 3183 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 1362 acgccgtcagcggcacctcccgcc 1385
>ref|NM_000528.2| Homo sapiens mannosidase, alpha, class 2B, member 1 (MAN2B1), mRNA Length = 3468 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 1653 acgccgtcagcggcacctcccgcc 1676
>gb|AF483836.1| Vaccinium macrocarpon dihydroflavonol-4-reductase (dfr2-1) mRNA, complete cds Length = 1353 Score = 40.1 bits (20), Expect = 1.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctc 76 |||||||||||||||| ||| ||||| ||||| Sbjct: 121 tgcgtcaccggagccgccggattcatcggctc 152
>gb|AF483835.1| Vaccinium macrocarpon dihydroflavonol-4-reductase (dfr1-1) mRNA, complete cds Length = 1304 Score = 40.1 bits (20), Expect = 1.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctc 76 |||||||||||||||| ||| ||||| ||||| Sbjct: 121 tgcgtcaccggagccgccggattcatcggctc 152
>gb|AC010422.7| Homo sapiens chromosome 19 clone CTD-2192J16, complete sequence Length = 203790 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 28567 acgccgtcagcggcacctcccgcc 28590
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 aggcgtggccatggccgccg 39 |||||||||||||||||||| Sbjct: 607425 aggcgtggccatggccgccg 607444
>gb|AC018761.6| Homo sapiens chromosome 19 clone CTD-2659N19, complete sequence Length = 147750 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 2245 acgccgtcagcggcacctcccgcc 2222
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 1.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattg 72 |||||||||||||||| ||||| ||||| Sbjct: 24474352 tgcgtcaccggagccgccggctacattg 24474325
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcgcccgcggctacgccg 114 |||||||||||||||||||| Sbjct: 2493058 cctcgcccgcggctacgccg 2493077
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttc 68 ||||||||||| |||||||||||| Sbjct: 170486 tgcgtcaccggcgccggcggcttc 170463
>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ2013_G04 Length = 73667 Score = 40.1 bits (20), Expect = 1.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattg 72 |||||||||||||||| ||||| ||||| Sbjct: 24162 tgcgtcaccggagccgccggctacattg 24135
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 40.1 bits (20), Expect = 1.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 tgcgtcaccggagccggcggcttcattg 72 |||||||||||||||| ||||| ||||| Sbjct: 100219 tgcgtcaccggagccgccggctacattg 100192
>dbj|AK107469.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B02, full insert sequence Length = 1507 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttc 68 ||||||||||| |||||||||||| Sbjct: 84 tgcgtcaccggcgccggcggcttc 107
>dbj|AK062499.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-A06, full insert sequence Length = 1393 Score = 40.1 bits (20), Expect = 1.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattg 72 |||||||||||||||| ||||| ||||| Sbjct: 64 tgcgtcaccggagccgccggctacattg 91
>gb|U60891.1|HSMANBS07 Human lysosomal alpha-mannosidase (manB) gene, exon 11 Length = 170 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 61 acgccgtcagcggcacctcccgcc 84
>gb|U68567.1|HSU68567 Human lysosomal acid alpha-mannosidase mRNA, complete cds Length = 3084 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 1328 acgccgtcagcggcacctcccgcc 1351
>gb|U68382.1|HSU68382 Human lysosomal acid alpha-mannosidase (MANB) mRNA, alternatively spliced transcript, complete cds Length = 3685 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 1238 acgccgtcagcggcacctcccgcc 1261
>gb|U60266.1|HSU60266 Homo sapiens lysosomal alpha-mannosidase (manB) mRNA, complete cds Length = 3172 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 1354 acgccgtcagcggcacctcccgcc 1377
>dbj|AB209921.1| Homo sapiens mRNA for mannosidase, alpha, class 2B, member 1 precursor variant protein Length = 3131 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 1328 acgccgtcagcggcacctcccgcc 1351
>gb|U05572.1|HSU05572 Human lysosomal alpha-mannosidase (MANB) mRNA, complete cds Length = 3199 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acgccgtccgcggcacctcccgcc 132 |||||||| ||||||||||||||| Sbjct: 1370 acgccgtcagcggcacctcccgcc 1393
>ref|XM_480356.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1743 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccg 114 |||| |||||||||||||||||| Sbjct: 757 cctcatcgcccgcggctacgccg 779
>ref|XM_507147.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1120_C08.22 mRNA Length = 2059 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccg 114 |||| |||||||||||||||||| Sbjct: 757 cctcatcgcccgcggctacgccg 779
>gb|AY658928.1| Synthetic construct Peudomonas aeruginosa clone FLH047044.01F PA3427 gene, partial cds Length = 912 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 cgtcaccggagccggcggc 65 ||||||||||||||||||| Sbjct: 39 cgtcaccggagccggcggc 57
>gb|AE008960.1| Agrobacterium tumefaciens str. C58 AT plasmid section 35 of 49 of the complete sequence Length = 10321 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 caggcgtggccatggccgc 37 ||||||||||||||||||| Sbjct: 6569 caggcgtggccatggccgc 6551
>gb|AE007908.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 36 of 50 of the complete sequence Length = 10029 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 caggcgtggccatggccgc 37 ||||||||||||||||||| Sbjct: 1112 caggcgtggccatggccgc 1094
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 aggcgtggccatggccgcc 38 ||||||||||||||||||| Sbjct: 361643 aggcgtggccatggccgcc 361625
>ref|XM_381225.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01049.1) partial mRNA Length = 22443 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 caggcgtggccatggccgc 37 ||||||||||||||||||| Sbjct: 1718 caggcgtggccatggccgc 1736
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 caggcgtggccatggccgc 37 ||||||||||||||||||| Sbjct: 21683 caggcgtggccatggccgc 21665
>gb|AY285922.1| Fragaria x ananassa cinnamoyl CoA reductase (CCR) mRNA, CCR-1 allele, complete cds Length = 1325 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 48 gtcaccggagccggcggcttcat 70 |||||||||||||| |||||||| Sbjct: 105 gtcaccggagccggaggcttcat 127
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 64 gcttcattggctcctggatcgtc 86 |||||||||||| |||||||||| Sbjct: 4885359 gcttcattggcttctggatcgtc 4885381
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 38.2 bits (19), Expect = 7.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 99 gcccgcggctacgccgtccgcggcacc 125 ||||||||| ||| ||||||||||||| Sbjct: 3281247 gcccgcggccacgacgtccgcggcacc 3281221
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 ctcgcccgcggctacgccg 114 ||||||||||||||||||| Sbjct: 71490 ctcgcccgcggctacgccg 71508
>gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP synthase gamma subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 900 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 gtggccatggccgccgtcg 42 ||||||||||||||||||| Sbjct: 558 gtggccatggccgccgtcg 540
>gb|AE004764.1| Pseudomonas aeruginosa PAO1, section 325 of 529 of the complete genome Length = 10425 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 cgtcaccggagccggcggc 65 ||||||||||||||||||| Sbjct: 962 cgtcaccggagccggcggc 944
>gb|AF135591.1|AF135591 Zea mays LIM transcription factor homolog (lim1) mRNA, complete cds Length = 930 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 gccatggccgccgtcgtct 45 ||||||||||||||||||| Sbjct: 59 gccatggccgccgtcgtct 41
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccg 114 |||| |||||||||||||||||| Sbjct: 99691 cctcatcgcccgcggctacgccg 99713
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 tggccatggccgccgtcgt 43 ||||||||||||||||||| Sbjct: 4293969 tggccatggccgccgtcgt 4293951
>dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, complete sequence Length = 87093 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ggcgtggccatggccgccg 39 ||||||||||||||||||| Sbjct: 25090 ggcgtggccatggccgccg 25108
>ref|XM_560001.1| Anopheles gambiae str. PEST ENSANGP00000026715 (ENSANGG00000023695), partial mRNA Length = 855 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 catggccgccgtcgtctgc 47 ||||||||||||||||||| Sbjct: 549 catggccgccgtcgtctgc 531
>dbj|AK072269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008O22, full insert sequence Length = 1743 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccg 114 |||| |||||||||||||||||| Sbjct: 757 cctcatcgcccgcggctacgccg 779
>dbj|AK070877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065C06, full insert sequence Length = 2059 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 92 cctcctcgcccgcggctacgccg 114 |||| |||||||||||||||||| Sbjct: 757 cctcatcgcccgcggctacgccg 779
>gb|AF041045.1|AF041045 Zea mays NADPH HC toxin reductase (hm1) gene, hm1-K61 allele, complete cds Length = 2633 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtca 87 ||||||||||||| | ||| ||||| ||||||||| |||||| Sbjct: 173 tgcgtcaccggaggagccgggttcatcggctcctggctcgtca 215
>gb|AF041044.1|AF041044 Zea mays NADPH HC toxin reductase (hm1) gene, hm1-Pr allele, complete cds Length = 5365 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtca 87 ||||||||||||| | ||| ||||| ||||||||| |||||| Sbjct: 847 tgcgtcaccggaggagccgggttcatcggctcctggctcgtca 889
>gb|AF041046.1|AF041046 Zea mays NADPH HC toxin reductase (hm1) gene, hm1-MO21A allele, complete cds Length = 2041 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtca 87 ||||||||||||| | ||| ||||| ||||||||| |||||| Sbjct: 150 tgcgtcaccggaggagccgggttcatcggctcctggctcgtca 192
>gb|AF041043.1|AF041043 Zea mays NADPH HC toxin reductase (hm1) mRNA, hm1-W22 allele, complete cds Length = 1244 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtca 87 ||||||||||||| | ||| ||||| ||||||||| |||||| Sbjct: 83 tgcgtcaccggaggagccgggttcatcggctcctggctcgtca 125
>gb|AY112454.1| Zea mays CL1239_1 mRNA sequence Length = 950 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 gccatggccgccgtcgtct 45 ||||||||||||||||||| Sbjct: 79 gccatggccgccgtcgtct 61
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 38.2 bits (19), Expect = 7.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 64 gcttcattggctcctggatcgtc 86 |||||||||||| |||||||||| Sbjct: 4888377 gcttcattggcttctggatcgtc 4888399
>emb|AJ628018.2| Streptomyces sp. SCC 2136 deoxysugar biosynthetic gene cluster Length = 77550 Score = 38.2 bits (19), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 47 cgtcaccggagccggcggcttcattggctcc 77 |||||||||||| | ||||||||| |||||| Sbjct: 39141 cgtcaccggagcggccggcttcatcggctcc 39111
>gb|U77463.1|HVU77463 Hordeum vulgare NADPH-dependent HC-toxin reductase mRNA, complete cds Length = 1279 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtca 87 ||||||||||| | || ||||||||| ||||| ||| |||||| Sbjct: 98 tgcgtcaccggcggcgccggcttcatcggctcatggctcgtca 140
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 38.2 bits (19), Expect = 7.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 gctcctcctcgcccgcggc 107 ||||||||||||||||||| Sbjct: 2656918 gctcctcctcgcccgcggc 2656900
>gb|L02540.1|MZETOXR Zea mays NADPH HC-toxin reductase mRNA, complete cds Length = 1337 Score = 38.2 bits (19), Expect = 7.4 Identities = 37/43 (86%) Strand = Plus / Plus Query: 45 tgcgtcaccggagccggcggcttcattggctcctggatcgtca 87 ||||||||||||| | ||| ||||| ||||||||| |||||| Sbjct: 73 tgcgtcaccggaggagccgggttcatcggctcctggctcgtca 115 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 927,604 Number of Sequences: 3902068 Number of extensions: 927604 Number of successful extensions: 78438 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76455 Number of HSP's gapped (non-prelim): 1979 length of query: 155 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 133 effective length of database: 17,147,199,772 effective search space: 2280577569676 effective search space used: 2280577569676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
